Psyllid ID: psy16840

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410---
Protein Sequence
MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGATEGAVQGRERNQVSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLERPVPRC
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccEEEcHHHHHHHHHcccEEEEEccEEEEEEccEEEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHEEccccccccHHHHHHccccHHHHHHHHHHHHcHHccccccccccccccccccccccccccccEEEEEccccHHHHHccccccccccHHHHHHccccccHHHHccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccEEEEEEcccHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEccccccccHHcccccccEEEEEcHHHHHHHHHcccEEEEEccEEEEccccEEEEEEEEcccccccccccccccccccHHccccHccccccccEEEccccEEEEEEEcccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccEccccccccEEEcccEEEEEEcccHHHHHHHcccccccccHHHHHHHcccHHHHccccccccccccccHHHHHHHHHHHHHcccccccccccHcHHHHHccccccccccccccccHHHHHHHHHHHHccHHHcccHHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccHHcEEEEEEcccccHHEEcccccccccccccc
Coil and Loop (DISEMBL)
mpryclfgdtvntasrmestgeplrihISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGAtegavqgrernqvsglpikngdshaGEIASMSLNLLDAvknhkiahrpqeTLKLRIGIHSDIIIITYLMnfgdgiprqgmtflhrspigchgnlkssncvvtsRWVLQVTDFGlhelrhcaendsigehQYYRSLLWKapellrdthapirgtqkaDVYAFAVILHEIigrrgpfggcglyepkgedceepfrpnlellrdscEPFVLACMRDcwaeapesrpdfpTIRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHrmlpapvasrltrgygvepesydlVTIYFSDIVGftamsaestplerpvprc
Flexible Loop (DISEMBL)
MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGATEGAVQGRERNQVSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAhrpqetlklriGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAeapesrpdfPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKrktedllhrmlpapvasrltrgygvEPESYDLVTIYFSDIVGFTAmsaestplerpvprc
Low Complexity Region (SEG)
MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGATEGAVQGRERNQVSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLERPVPRC
Disordered region (IsUnstruct)
***YCLFGDTV***********PLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGATEGAV************************SMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE*********************************************************LV****************LLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTA***************
Disordered Region (DISOPRED)
MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGATEGAVQGRER**********GDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA*IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVN**************DLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPL***V***
Disordered Region (DISEMBL)
MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGATEGAVQGRERNQVSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSA************
Disordered Region (DISPRO)
*PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGATEGAVQGRERNQVSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAEST***R*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGATEGAVQGRERNQVSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLERPVPRC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	413	2.2.26 [Sep-21-2011]
Q07553	1163	Guanylate cyclase 32E OS=	no	N/A	0.602	0.214	0.459	3e-59
P55202	1050	Atrial natriuretic peptid	N/A	N/A	0.595	0.234	0.487	1e-58
P16067	1047	Atrial natriuretic peptid	yes	N/A	0.595	0.234	0.468	2e-57
Q6VVW5	1047	Atrial natriuretic peptid	yes	N/A	0.595	0.234	0.468	2e-57
P16066	1061	Atrial natriuretic peptid	yes	N/A	0.593	0.230	0.472	2e-57
P46197	1047	Atrial natriuretic peptid	no	N/A	0.595	0.234	0.464	6e-57
P18293	1057	Atrial natriuretic peptid	no	N/A	0.593	0.231	0.461	6e-57
P20594	1047	Atrial natriuretic peptid	no	N/A	0.595	0.234	0.464	7e-57
P16065	1125	Speract receptor OS=Stron	no	N/A	0.605	0.222	0.424	2e-56
P18910	1057	Atrial natriuretic peptid	no	N/A	0.593	0.231	0.457	7e-56

>sp|Q07553|GCY3E_DROME Guanylate cyclase 32E OS=Drosophila melanogaster GN=Gyc32E PE=1 SV=4

 Score =  229 bits (583), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 125/272 (45%), Positives = 164/272 (60%), Gaps = 23/272 (8%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +LH S I  HGNL+SSNC++ SRWV Q++DFGLHEL+   E  +  E +  R+L  
Sbjct: 637 KGMIYLHDSEIISHGNLRSSNCLIDSRWVCQISDFGLHELKAGQEEPNKSELELKRALCM 696

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEP---KGEDCEE---- 256
            APELLRD + P RG+QK DVY+F ++L+E+IGR+GP+G     +    +   C E    
Sbjct: 697 -APELLRDAYRPGRGSQKGDVYSFGILLYEMIGRKGPWGDTAYSKEEIIQFVKCPEMLQH 755

Query: 257 -PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMME 315
             FRP L         ++  C+  CW E PE RPD   +R  LK ++ G + NI D M+ 
Sbjct: 756 GVFRPALTHTHLDIPDYIRKCLCQCWDEDPEVRPDIRLVRMHLKELQAGLKPNIFDNMLS 815

Query: 316 MMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRG 375
           +ME              KYA NLE LV +RT  +YEEK+KT+ LL++MLP PVA  L RG
Sbjct: 816 IME--------------KYAYNLEGLVQERTNLLYEEKKKTDMLLYQMLPRPVAELLKRG 861

Query: 376 YGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
             VE E +D VTI FSDIVGFT +   STP E
Sbjct: 862 DPVEAECFDCVTILFSDIVGFTELCTTSTPFE 893

Drosophila melanogaster (taxid: 7227)
EC: 4EC: .EC: 6EC: .EC: 1EC: .EC: 2

>sp|P55202|ANPRB_ANGJA Atrial natriuretic peptide receptor 2 OS=Anguilla japonica GN=npr2 PE=2 SV=1

 Score =  227 bits (578), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/271 (48%), Positives = 167/271 (61%), Gaps = 25/271 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM FLH S IG HGNLKSSNCVV SR+VL++TD+GL   R   EN+    H  Y   LW
Sbjct: 633 KGMNFLHNSYIGSHGNLKSSNCVVDSRFVLKITDYGLASFRSSCENED--SHALYAKKLW 690

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGL-YEPKG-----EDCEEP 257
            APELL     P +GTQK DVY+F +IL EI  R GPF   G+   PK       + ++P
Sbjct: 691 TAPELLIYDRHPPQGTQKGDVYSFGIILQEIALRNGPFYVDGMDLSPKEIVQKVRNGQKP 750

Query: 258 -FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEM 316
            FRP  +    S E  +L  M  CWAE P  RPDF  I+  +  MK  K           
Sbjct: 751 YFRPTTDTSCHSEELSIL--MEGCWAEDPADRPDFSYIKIFV--MKLNK----------- 795

Query: 317 MEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGY 376
            E   +I++ ++  ME+YANNLE+LV +RT    EEKRK E+LL+++LP  VA +L RG 
Sbjct: 796 -EGSTSILNNLLSRMEQYANNLENLVEERTQAYLEEKRKAENLLYQILPHSVAEQLKRGE 854

Query: 377 GVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
            V+ E++D VTIYFSDIVGFT+MSAESTPL+
Sbjct: 855 TVQAEAFDSVTIYFSDIVGFTSMSAESTPLQ 885

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Anguilla japonica (taxid: 7937)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P16067|ANPRB_RAT Atrial natriuretic peptide receptor 2 OS=Rattus norvegicus GN=Npr2 PE=1 SV=1

 Score =  223 bits (568), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/271 (46%), Positives = 162/271 (59%), Gaps = 25/271 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM FLH S I  HG+LKSSNCVV SR+VL++TD+GL   R  AE D    H  Y   LW
Sbjct: 629 KGMAFLHNSIISSHGSLKSSNCVVDSRFVLKITDYGLASFRSTAEPDD--SHALYAKKLW 686

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGL-YEPKG-----EDCEEP 257
            APELL     P  G QKADVY+FA+IL EI  R GPF   GL   PK       + + P
Sbjct: 687 TAPELLSGNPLPTTGMQKADVYSFAIILQEIALRSGPFYLEGLDLSPKEIVQKVRNGQRP 746

Query: 258 -FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEM 316
            FRP+++  R      ++  M  CWA+ P  RPDF  I+  ++                 
Sbjct: 747 YFRPSID--RTQLNEELVLLMERCWAQDPTERPDFGQIKGFIRRFNK------------- 791

Query: 317 MEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGY 376
            E   +I+D ++  ME+YANNLE LV +RT    EEKRK E LL+++LP  VA +L RG 
Sbjct: 792 -EGGTSILDNLLLRMEQYANNLEKLVEERTQAYLEEKRKAEALLYQILPHSVAEQLKRGE 850

Query: 377 GVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
            V+ E++D VTIYFSDIVGFTA+SAESTP++
Sbjct: 851 TVQAEAFDSVTIYFSDIVGFTALSAESTPMQ 881

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|Q6VVW5|ANPRB_MOUSE Atrial natriuretic peptide receptor 2 OS=Mus musculus GN=Npr2 PE=2 SV=2

 Score =  223 bits (568), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/271 (46%), Positives = 162/271 (59%), Gaps = 25/271 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM FLH S I  HG+LKSSNCVV SR+VL++TD+GL   R  AE D    H  Y   LW
Sbjct: 629 KGMAFLHNSIISSHGSLKSSNCVVDSRFVLKITDYGLASFRSTAEPDD--SHALYAKKLW 686

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGL-YEPKG-----EDCEEP 257
            APELL     P  G QKADVY+FA+IL EI  R GPF   GL   PK       + + P
Sbjct: 687 TAPELLSGNPLPTTGMQKADVYSFAIILQEIALRSGPFYLEGLDLSPKEIVQKVRNGQRP 746

Query: 258 -FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEM 316
            FRP+++  R      ++  M  CWA+ P  RPDF  I+  ++                 
Sbjct: 747 YFRPSID--RTQLNEELVLLMERCWAQDPTERPDFGQIKGFIRRFNK------------- 791

Query: 317 MEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGY 376
            E   +I+D ++  ME+YANNLE LV +RT    EEKRK E LL+++LP  VA +L RG 
Sbjct: 792 -EGGTSILDNLLLRMEQYANNLEKLVEERTQAYLEEKRKAEALLYQILPHSVAEQLKRGE 850

Query: 377 GVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
            V+ E++D VTIYFSDIVGFTA+SAESTP++
Sbjct: 851 TVQAEAFDSVTIYFSDIVGFTALSAESTPMQ 881

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P16066|ANPRA_HUMAN Atrial natriuretic peptide receptor 1 OS=Homo sapiens GN=NPR1 PE=1 SV=1

 Score =  223 bits (568), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/271 (47%), Positives = 158/271 (58%), Gaps = 26/271 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM FLH   I  HGNLKSSNCVV  R+VL++TD+GL   R     D    H  Y   LW
Sbjct: 645 KGMLFLHNGAICSHGNLKSSNCVVDGRFVLKITDYGLESFRDL---DPEQGHTVYAKKLW 701

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEE------- 256
            APELLR    P+RG+Q  DVY+F +IL EI  R G F   GL     E  E        
Sbjct: 702 TAPELLRMASPPVRGSQAGDVYSFGIILQEIALRSGVFHVEGLDLSPKEIIERVTRGEQP 761

Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEM 316
           PFRP+L L     E  +L  M+ CWAE P+ RP F  IR  L+                 
Sbjct: 762 PFRPSLALQSHLEELGLL--MQRCWAEDPQERPPFQQIRLTLRKFN-------------- 805

Query: 317 MEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGY 376
            E   NI+D ++  ME+YANNLE+LV +RT    EEKRK E LL+++LP  VA +L RG 
Sbjct: 806 RENSSNILDNLLSRMEQYANNLEELVEERTQAYLEEKRKAEALLYQILPHSVAEQLKRGE 865

Query: 377 GVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
            V+ E++D VTIYFSDIVGFTA+SAESTP++
Sbjct: 866 TVQAEAFDSVTIYFSDIVGFTALSAESTPMQ 896

Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P46197|ANPRB_BOVIN Atrial natriuretic peptide receptor 2 OS=Bos taurus GN=NPR2 PE=2 SV=1

 Score =  221 bits (564), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 126/271 (46%), Positives = 161/271 (59%), Gaps = 25/271 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM FLH S I  HG+LKSSNCVV SR+VL++TD+GL   R  AE D    H  Y   LW
Sbjct: 629 KGMAFLHNSIIASHGSLKSSNCVVDSRFVLKITDYGLASFRSTAEPDD--SHALYAKKLW 686

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGL-YEPKG-----EDCEEP 257
            APELL     P  G QKADVY+F +IL EI  R GPF   GL   PK       + + P
Sbjct: 687 TAPELLSGNPLPTTGMQKADVYSFGIILQEIALRSGPFYLEGLDLSPKEIVQKVRNGQRP 746

Query: 258 -FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEM 316
            FRP+++  R      ++  M  CWA+ P  RPDF  I+  ++                 
Sbjct: 747 YFRPSID--RTQLNEELVLLMERCWAQDPAERPDFGQIKGFIRRFNK------------- 791

Query: 317 MEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGY 376
            E   +I+D ++  ME+YANNLE LV +RT    EEKRK E LL+++LP  VA +L RG 
Sbjct: 792 -EGGTSILDNLLLRMEQYANNLEKLVEERTQAYLEEKRKAEALLYQILPHSVAEQLKRGE 850

Query: 377 GVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
            V+ E++D VTIYFSDIVGFTA+SAESTP++
Sbjct: 851 TVQAEAFDSVTIYFSDIVGFTALSAESTPMQ 881

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Bos taurus (taxid: 9913)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P18293|ANPRA_MOUSE Atrial natriuretic peptide receptor 1 OS=Mus musculus GN=Npr1 PE=2 SV=2

 Score =  221 bits (564), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 125/271 (46%), Positives = 157/271 (57%), Gaps = 26/271 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM FLH   IG HGNLKSSNCVV  R+VL++TD+GL   R          H  +   LW
Sbjct: 641 KGMLFLHNGAIGSHGNLKSSNCVVDGRFVLKITDYGLESFRDPEPEQG---HTLFAKKLW 697

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEE------- 256
            APELLR    P RG+Q  DVY+F +IL EI  R G F   GL     E  E        
Sbjct: 698 TAPELLRMASPPARGSQAGDVYSFGIILQEIALRSGVFYVEGLDLSPKEIIERVTRGEQP 757

Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEM 316
           PFRP+++L     E  +   M+ CWAE P+ RP F  IR  L+                 
Sbjct: 758 PFRPSMDLQSHLEE--LGQLMQRCWAEDPQERPPFQQIRLALRKFNK------------- 802

Query: 317 MEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGY 376
            E   NI+D ++  ME+YANNLE+LV +RT    EEKRK E LL+++LP  VA +L RG 
Sbjct: 803 -ENSSNILDNLLSRMEQYANNLEELVEERTQAYLEEKRKAEALLYQILPHSVAEQLKRGE 861

Query: 377 GVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
            V+ E++D VTIYFSDIVGFTA+SAESTP++
Sbjct: 862 TVQAEAFDSVTIYFSDIVGFTALSAESTPMQ 892

Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P20594|ANPRB_HUMAN Atrial natriuretic peptide receptor 2 OS=Homo sapiens GN=NPR2 PE=1 SV=1

 Score =  221 bits (564), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 126/271 (46%), Positives = 161/271 (59%), Gaps = 25/271 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM FLH S I  HG+LKSSNCVV SR+VL++TD+GL   R  AE D    H  Y   LW
Sbjct: 629 KGMAFLHNSIISSHGSLKSSNCVVDSRFVLKITDYGLASFRSTAEPDD--SHALYAKKLW 686

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGL-YEPKG-----EDCEEP 257
            APELL     P  G QKADVY+F +IL EI  R GPF   GL   PK       + + P
Sbjct: 687 TAPELLSGNPLPTTGMQKADVYSFGIILQEIALRSGPFYLEGLDLSPKEIVQKVRNGQRP 746

Query: 258 -FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEM 316
            FRP+++  R      ++  M  CWA+ P  RPDF  I+  ++                 
Sbjct: 747 YFRPSID--RTQLNEELVLLMERCWAQDPAERPDFGQIKGFIRRFNK------------- 791

Query: 317 MEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGY 376
            E   +I+D ++  ME+YANNLE LV +RT    EEKRK E LL+++LP  VA +L RG 
Sbjct: 792 -EGGTSILDNLLLRMEQYANNLEKLVEERTQAYLEEKRKAEALLYQILPHSVAEQLKRGE 850

Query: 377 GVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
            V+ E++D VTIYFSDIVGFTA+SAESTP++
Sbjct: 851 TVQAEAFDSVTIYFSDIVGFTALSAESTPMQ 881

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P16065|GCY_STRPU Speract receptor OS=Strongylocentrotus purpuratus PE=2 SV=1

 Score =  219 bits (559), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 115/271 (42%), Positives = 168/271 (61%), Gaps = 21/271 (7%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSLL 202
           +G+ +LH S I  HG+LKSSNCVV +RWVLQ+TD+GL+E +   + D  +G+H      L
Sbjct: 678 KGIVYLHSSEIKSHGHLKSSNCVVDNRWVLQITDYGLNEFKKGQKQDVDLGDHAKLARQL 737

Query: 203 WKAPELLR-DTHAPIRGTQKADVYAFAVILHEIIGRRGPF--GGCGLYEPKGEDCE---E 256
           W +PE LR +   P  G+ + D+Y+FA+IL E+  R+ PF      L +  G        
Sbjct: 738 WTSPEHLRQEGSMPTAGSPQGDIYSFAIILTELYSRQEPFHENEMDLADIIGRVKSGEVP 797

Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEM 316
           P+RP L  +  +    VL+ +R CW E P  RP+   +R  L  ++ G + NI+D M+ +
Sbjct: 798 PYRPILNAVNAAAPDCVLSAIRACWPEDPADRPNIMAVRTMLAPLQKGLKPNILDNMIAI 857

Query: 317 MEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGY 376
           ME+              Y NNLE+LV++RT E+ +EK KTE LLHRMLP  +AS+L +G 
Sbjct: 858 MER--------------YTNNLEELVDERTQELQKEKTKTEQLLHRMLPPSIASQLIKGI 903

Query: 377 GVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
            V PE++++V+I+FSDIVGFTA+SA STP++
Sbjct: 904 AVLPETFEMVSIFFSDIVGFTALSAASTPIQ 934

Implicated as a cell-surface receptor on spermatozoa for 'speract' a chemotactic peptide, and on various other cells as a receptor for atrial natriuretic peptide.

Strongylocentrotus purpuratus (taxid: 7668)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P18910|ANPRA_RAT Atrial natriuretic peptide receptor 1 OS=Rattus norvegicus GN=Npr1 PE=1 SV=1

 Score =  218 bits (555), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/271 (45%), Positives = 156/271 (57%), Gaps = 26/271 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM FLH   I  HGNLKSSNCVV  R+VL++TD+GL   R          H  +   LW
Sbjct: 641 KGMLFLHNGAICSHGNLKSSNCVVDGRFVLKITDYGLESFRDPEPEQG---HTLFAKKLW 697

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEE------- 256
            APELLR    P RG+Q  DVY+F +IL EI  R G F   GL     E  E        
Sbjct: 698 TAPELLRMASPPARGSQAGDVYSFGIILQEIALRSGVFYVEGLDLSPKEIIERVTRGEQP 757

Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEM 316
           PFRP+++L     E  +   M+ CWAE P+ RP F  IR  L+                 
Sbjct: 758 PFRPSMDLQSHLEE--LGQLMQRCWAEDPQERPPFQQIRLALRKFNK------------- 802

Query: 317 MEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGY 376
            E   NI+D ++  ME+YANNLE+LV +RT    EEKRK E LL+++LP  VA +L RG 
Sbjct: 803 -ENSSNILDNLLSRMEQYANNLEELVEERTQAYLEEKRKAEALLYQILPHSVAEQLKRGE 861

Query: 377 GVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
            V+ E++D VTIYFSDIVGFTA+SAESTP++
Sbjct: 862 TVQAEAFDSVTIYFSDIVGFTALSAESTPMQ 892

Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	413
328710973	1356	PREDICTED: guanylate cyclase 32E-like [A	0.605	0.184	0.688	1e-105
242006260	1325	Guanylate cyclase 32E precursor, putativ	0.641	0.2	0.652	1e-104
189241428	1495	PREDICTED: similar to guanylate cyclase	0.602	0.166	0.666	1e-100
345492301	1551	PREDICTED: guanylate cyclase 32E-like is	0.602	0.160	0.649	1e-100
383862091	1536	PREDICTED: guanylate cyclase 32E-like [M	0.602	0.162	0.642	1e-98
340711365	1456	PREDICTED: guanylate cyclase 32E-like [B	0.602	0.171	0.638	2e-98
350402370	1330	PREDICTED: guanylate cyclase 32E-like [B	0.602	0.187	0.638	2e-98
380029912	1440	PREDICTED: guanylate cyclase 32E-like [A	0.602	0.172	0.638	3e-98
322783015	1243	hypothetical protein SINV_07007 [Solenop	0.602	0.200	0.638	5e-97
332024957	1154	Guanylate cyclase 32E [Acromyrmex echina	0.602	0.215	0.635	7e-96

>gi|328710973|ref|XP_001945615.2| PREDICTED: guanylate cyclase 32E-like [Acyrthosiphon pisum]

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/276 (68%), Positives = 216/276 (78%), Gaps = 26/276 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+H SP+GCHGNLKSSNC+VTSRWVLQVTDFGLH+LR  AENDSIGEHQYYR+LLW
Sbjct: 726 RGMIFIHNSPLGCHGNLKSSNCIVTSRWVLQVTDFGLHDLRQGAENDSIGEHQYYRNLLW 785

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK----------GED 253
           KAPELLRD  A I+G+QK DVYAF++ILHEI+ RRGPFG CG+ EPK           E 
Sbjct: 786 KAPELLRDPSAWIKGSQKGDVYAFSIILHEIMCRRGPFGACGVEEPKEIIRLVKLGYDEV 845

Query: 254 CEEPFRPNLELLRDS--CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIID 311
              P RP++  LRD    E +V+ C+ DCW E PE+RPDF  IRARLK MKDGK KNI+D
Sbjct: 846 NGVPLRPSIHHLRDCEMAEDYVIQCITDCWDEFPENRPDFGMIRARLKKMKDGKHKNIMD 905

Query: 312 QMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASR 371
           Q              MM+MMEKYANNLEDLVNQRT EVYEEK+KTEDLLHRMLPAPVA +
Sbjct: 906 Q--------------MMDMMEKYANNLEDLVNQRTHEVYEEKQKTEDLLHRMLPAPVAKQ 951

Query: 372 LTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
           LT G+G+EPESY+ VTIYFSDIVGFTAMSAESTPL+
Sbjct: 952 LTLGHGIEPESYNSVTIYFSDIVGFTAMSAESTPLQ 987

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242006260|ref|XP_002423970.1| Guanylate cyclase 32E precursor, putative [Pediculus humanus corporis] gi|212507252|gb|EEB11232.1| Guanylate cyclase 32E precursor, putative [Pediculus humanus corporis]

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/296 (65%), Positives = 227/296 (76%), Gaps = 31/296 (10%)

Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           I  DI+ I  L++  D I  + M F+H S + CHGNLKSSNCVVTSRWVLQVTDFGLHEL
Sbjct: 612 IKLDIMFIASLVH--DLI--KAMMFIHSSALVCHGNLKSSNCVVTSRWVLQVTDFGLHEL 667

Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
           RHCAENDSIGEHQYYR++ WKAPELLR++ +PI+G+QK D+YAFA+IL+EIIGR+GPFGG
Sbjct: 668 RHCAENDSIGEHQYYRNMFWKAPELLRESCSPIKGSQKGDIYAFAIILYEIIGRKGPFGG 727

Query: 244 CGLYEPKG---------EDCEEPFRPNLELLRDS---CEPFVLACMRDCWAEAPESRPDF 291
           C  YEPK              EPFRP+L+LLR S   C  +V +C+ DCW+E PE RPDF
Sbjct: 728 CR-YEPKEIIELVKAYPAKGSEPFRPDLDLLRVSEVGCPEYVASCIEDCWSEVPEMRPDF 786

Query: 292 PTIRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYE 351
             IR RLK MKDG ++NI+DQM              MEMMEKYANNLEDLV +RT  ++E
Sbjct: 787 SVIRTRLKKMKDGMKRNIMDQM--------------MEMMEKYANNLEDLVTERTRLLFE 832

Query: 352 EKRKTEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
           EK+KTEDLL+RMLPAPVA RLT+G GVEPES+D VTIYFSDIVGFTAMSAESTPL+
Sbjct: 833 EKQKTEDLLNRMLPAPVAERLTKGIGVEPESFDQVTIYFSDIVGFTAMSAESTPLQ 888

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189241428|ref|XP_971364.2| PREDICTED: similar to guanylate cyclase [Tribolium castaneum] gi|270014138|gb|EFA10586.1| hypothetical protein TcasGA2_TC012843 [Tribolium castaneum]

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/276 (66%), Positives = 212/276 (76%), Gaps = 27/276 (9%)

Query: 144  QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            +GM ++H S + CHGNLKSSNCVVTSRWVLQVTDFGL E+RHCAENDSIGEHQYYRSL W
Sbjct: 774  KGMLYIHNSMLVCHGNLKSSNCVVTSRWVLQVTDFGLAEMRHCAENDSIGEHQYYRSLFW 833

Query: 204  KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------EDC 254
            KAPE+LR+  A  RGTQK DVYAFA+IL+EI+GR+GPFG  G +EPK           D 
Sbjct: 834  KAPEILRNPSAYCRGTQKGDVYAFAIILYEILGRKGPFGMTG-FEPKEIIELVKREPIDG 892

Query: 255  EEPFRPNLELLRD---SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIID 311
            EE FRP+++LL D    C+ +VL CM+DCWAE PE+RPDF  IR+RLK MKDGK KNI  
Sbjct: 893  EESFRPDIDLLLDCEIGCDDYVLQCMKDCWAENPEARPDFAAIRSRLKRMKDGKNKNI-- 950

Query: 312  QMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASR 371
                        +DQMM+MM  YANNLE++V +RT  +YEEK KTEDLLHRMLP PVA R
Sbjct: 951  ------------MDQMMDMMVTYANNLEEIVTERTRLLYEEKMKTEDLLHRMLPKPVAER 998

Query: 372  LTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
            LT G GVEPES+D VTIYFSDIVGFTAMSAESTPL+
Sbjct: 999  LTNGSGVEPESFDSVTIYFSDIVGFTAMSAESTPLQ 1034

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345492301|ref|XP_003426811.1| PREDICTED: guanylate cyclase 32E-like isoform 2 [Nasonia vitripennis] gi|345492303|ref|XP_001600593.2| PREDICTED: guanylate cyclase 32E-like isoform 1 [Nasonia vitripennis]

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/277 (64%), Positives = 217/277 (78%), Gaps = 28/277 (10%)

Query: 144  QGMTFLHRSPI-GCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
            +GM ++H S +  CHGNLKSSNCVVTSRWVLQV+DFGLH++RHCAE+DSIGEHQYYR+L 
Sbjct: 739  KGMLYIHESSVLVCHGNLKSSNCVVTSRWVLQVSDFGLHDMRHCAESDSIGEHQYYRNLF 798

Query: 203  WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK---------GED 253
            WKAPELLR+ HAPIRGTQ+ D+Y+FA+IL EIIGR+GP+GG  L EPK          ED
Sbjct: 799  WKAPELLRNLHAPIRGTQEGDIYSFAIILFEIIGRKGPYGGVNL-EPKEIIDRVKRYPED 857

Query: 254  CEEPFRPNLELLRDS---CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNII 310
             E PFRPN+++L +S   C  +++  + DCWAE+PE RPDF TIR RLK MK GK +NI+
Sbjct: 858  GEPPFRPNVDILSESEADCADYIVNTITDCWAESPELRPDFKTIRTRLKKMKAGKHRNIM 917

Query: 311  DQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVAS 370
            DQ              MM+MMEKYANNLEDLV++RT  ++EEK+KTEDLLHRMLP PVA+
Sbjct: 918  DQ--------------MMDMMEKYANNLEDLVSERTRLLFEEKQKTEDLLHRMLPEPVAN 963

Query: 371  RLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
             LT G GVEPE++DLVTIYFSDIVGFTAMSAESTP +
Sbjct: 964  CLTNGIGVEPEAFDLVTIYFSDIVGFTAMSAESTPFQ 1000

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862091|ref|XP_003706517.1| PREDICTED: guanylate cyclase 32E-like [Megachile rotundata]

 Score =  366 bits (939), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 178/277 (64%), Positives = 217/277 (78%), Gaps = 28/277 (10%)

Query: 144  QGMTFLHRSPI-GCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
            +GM ++H S +  CHGNLKSSNCVVTSRWVLQV+DFGLH++RHCAE+DSIGEHQYYR+L 
Sbjct: 807  KGMLYIHESSVLVCHGNLKSSNCVVTSRWVLQVSDFGLHDMRHCAESDSIGEHQYYRNLF 866

Query: 203  WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------ED 253
            WKAPELLR+ +APIRGTQ+ D+Y+FA+IL EIIGR+GP+GG  L EPK          ED
Sbjct: 867  WKAPELLRNPNAPIRGTQEGDIYSFAIILFEIIGRKGPYGGVNL-EPKEIIDRVKRFPED 925

Query: 254  CEEPFRPNLELLRDS---CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNII 310
             E PFRPN+E+L +S   C  ++++ + DCWAE+PE RPDF  IR RLK MK G+ +NI+
Sbjct: 926  GEPPFRPNIEILSESVADCAEYIVSTITDCWAESPELRPDFKMIRTRLKKMKAGRHRNIM 985

Query: 311  DQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVAS 370
            DQ              MM+MMEKYANNLEDLV++RT  ++EEK+KTEDLLHRMLP PVA+
Sbjct: 986  DQ--------------MMDMMEKYANNLEDLVSERTRLLFEEKQKTEDLLHRMLPEPVAN 1031

Query: 371  RLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
             LT G GVEPE++DLVTIYFSDIVGFTAMSAESTP +
Sbjct: 1032 CLTNGIGVEPEAFDLVTIYFSDIVGFTAMSAESTPFQ 1068

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340711365|ref|XP_003394247.1| PREDICTED: guanylate cyclase 32E-like [Bombus terrestris]

 Score =  365 bits (937), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 177/277 (63%), Positives = 217/277 (78%), Gaps = 28/277 (10%)

Query: 144 QGMTFLHRSPI-GCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           +GM ++H S +  CHGNLKSSNCVVTSRWVLQV+DFGLH++RHCAE+DSIGEHQYYR+L 
Sbjct: 725 KGMLYIHESSVLVCHGNLKSSNCVVTSRWVLQVSDFGLHDMRHCAESDSIGEHQYYRNLF 784

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------ED 253
           WKAPELLR+ +APIRGTQ+ D+Y+FA+IL E+IGR+GP+GG  L EPK          ED
Sbjct: 785 WKAPELLRNPNAPIRGTQEGDIYSFAIILFEMIGRKGPYGGVNL-EPKEIIDRVKRFPED 843

Query: 254 CEEPFRPNLELLRDS---CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNII 310
            E PFRPN+E+L +S   C  ++++ + DCWAE+PE RPDF  IR RLK MK G+ +NI+
Sbjct: 844 GEPPFRPNIEILSESEADCAEYIVSTITDCWAESPELRPDFKMIRTRLKKMKAGRHRNIM 903

Query: 311 DQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVAS 370
           DQ              MM+MMEKYANNLEDLV++RT  ++EEK+KTEDLLHRMLP PVA+
Sbjct: 904 DQ--------------MMDMMEKYANNLEDLVSERTRLLFEEKQKTEDLLHRMLPEPVAN 949

Query: 371 RLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
            LT G GVEPE++DLVTIYFSDIVGFTAMSAESTP +
Sbjct: 950 CLTNGIGVEPEAFDLVTIYFSDIVGFTAMSAESTPFQ 986

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350402370|ref|XP_003486460.1| PREDICTED: guanylate cyclase 32E-like [Bombus impatiens]

 Score =  365 bits (937), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 177/277 (63%), Positives = 217/277 (78%), Gaps = 28/277 (10%)

Query: 144 QGMTFLHRSPI-GCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           +GM ++H S +  CHGNLKSSNCVVTSRWVLQV+DFGLH++RHCAE+DSIGEHQYYR+L 
Sbjct: 599 KGMLYIHESSVLVCHGNLKSSNCVVTSRWVLQVSDFGLHDMRHCAESDSIGEHQYYRNLF 658

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------ED 253
           WKAPELLR+ +APIRGTQ+ D+Y+FA+IL E+IGR+GP+GG  L EPK          ED
Sbjct: 659 WKAPELLRNPNAPIRGTQEGDIYSFAIILFEMIGRKGPYGGVNL-EPKEIIDRVKRFPED 717

Query: 254 CEEPFRPNLELLRDS---CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNII 310
            E PFRPN+E+L +S   C  ++++ + DCWAE+PE RPDF  IR RLK MK G+ +NI+
Sbjct: 718 GEPPFRPNIEILSESEADCAEYIVSTITDCWAESPELRPDFKMIRTRLKKMKAGRHRNIM 777

Query: 311 DQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVAS 370
           DQ              MM+MMEKYANNLEDLV++RT  ++EEK+KTEDLLHRMLP PVA+
Sbjct: 778 DQ--------------MMDMMEKYANNLEDLVSERTRLLFEEKQKTEDLLHRMLPEPVAN 823

Query: 371 RLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
            LT G GVEPE++DLVTIYFSDIVGFTAMSAESTP +
Sbjct: 824 CLTNGIGVEPEAFDLVTIYFSDIVGFTAMSAESTPFQ 860

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380029912|ref|XP_003698608.1| PREDICTED: guanylate cyclase 32E-like [Apis florea]

 Score =  364 bits (935), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 177/277 (63%), Positives = 217/277 (78%), Gaps = 28/277 (10%)

Query: 144 QGMTFLHRSPI-GCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           +GM ++H S +  CHGNLKSSNCVVTSRWVLQV+DFGLH++RHCAE+DSIGEHQYYR+L 
Sbjct: 709 KGMLYIHESSVLVCHGNLKSSNCVVTSRWVLQVSDFGLHDMRHCAESDSIGEHQYYRNLF 768

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------ED 253
           WKAPELLR+ +APIRGTQ+ D+Y+FA+IL EIIGR+GP+GG  L EPK          ED
Sbjct: 769 WKAPELLRNPNAPIRGTQEGDIYSFAIILFEIIGRKGPYGGVNL-EPKEIIDRVKRFPED 827

Query: 254 CEEPFRPNLELLRDS---CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNII 310
            E PFRPN+++L +S   C  ++++ + DCWAE+PE RPDF  IR RLK MK G+ +NI+
Sbjct: 828 GEPPFRPNIDILSESEADCAEYIVSTITDCWAESPELRPDFKMIRTRLKKMKAGRHRNIM 887

Query: 311 DQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVAS 370
           DQ              MM+MMEKYANNLEDLV++RT  ++EEK+KTEDLLHRMLP PVA+
Sbjct: 888 DQ--------------MMDMMEKYANNLEDLVSERTRLLFEEKQKTEDLLHRMLPEPVAN 933

Query: 371 RLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
            LT G GVEPE++DLVTIYFSDIVGFTAMSAESTP +
Sbjct: 934 CLTNGIGVEPEAFDLVTIYFSDIVGFTAMSAESTPFQ 970

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322783015|gb|EFZ10727.1| hypothetical protein SINV_07007 [Solenopsis invicta]

 Score =  361 bits (926), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 177/277 (63%), Positives = 212/277 (76%), Gaps = 28/277 (10%)

Query: 144 QGMTFLHRSPI-GCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           +GM ++H S +  CHGNLKSSNCVVTSRWVLQV+DFGLH++RHCAE+DSIGEHQYYRSL 
Sbjct: 523 KGMLYIHESSLLVCHGNLKSSNCVVTSRWVLQVSDFGLHDMRHCAESDSIGEHQYYRSLF 582

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------ED 253
           WKAPELLR+ HAPI+GTQ  D+Y+FA+IL+EI+GR+GP+G   L EPK          ED
Sbjct: 583 WKAPELLRNPHAPIKGTQAGDIYSFAIILYEILGRKGPYGNINL-EPKEIIDRVKRFPED 641

Query: 254 CEEPFRPNLELLRDS---CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNII 310
            E PFRPNL +L +S   C  +V++ + DCWAE+PE RPDF TIR RLK MK G  +NI+
Sbjct: 642 GEPPFRPNLNILSESKANCADYVVSTITDCWAESPEFRPDFKTIRTRLKKMKAGWHRNIM 701

Query: 311 DQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVAS 370
           D              QMM MMEKYA+NLEDLV +RT  + +EK+KTEDLLHRMLP PVA+
Sbjct: 702 D--------------QMMNMMEKYASNLEDLVTERTGLLLDEKKKTEDLLHRMLPKPVAN 747

Query: 371 RLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
            LT G GVEPE++DLVTIYFSDIVGFTAMSAESTP +
Sbjct: 748 CLTNGIGVEPEAFDLVTIYFSDIVGFTAMSAESTPFQ 784

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024957|gb|EGI65144.1| Guanylate cyclase 32E [Acromyrmex echinatior]

 Score =  357 bits (915), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 176/277 (63%), Positives = 209/277 (75%), Gaps = 28/277 (10%)

Query: 144 QGMTFLHRSPI-GCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           +GM+++H S +  CHGNLKSSNCVVTSRWVLQV+DFGLH +RHCAE+DSIGEHQYYR+L 
Sbjct: 432 KGMSYIHESSLLVCHGNLKSSNCVVTSRWVLQVSDFGLHNMRHCAESDSIGEHQYYRNLF 491

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------ED 253
           WKAPELLR++HAPI+GTQ  D+Y+FA+IL+EI+GR+GP+G   L EPK          ED
Sbjct: 492 WKAPELLRNSHAPIKGTQAGDIYSFAIILYEILGRKGPYGNINL-EPKEIIDRVKRFPED 550

Query: 254 CEEPFRPNLELLRDS---CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNII 310
            E PFRPNL +L +S   C  +V+  + DCWAE PE RPDF  IR RLK MK G  +NI+
Sbjct: 551 GEPPFRPNLNVLSESKANCADYVVITIMDCWAENPELRPDFKMIRTRLKRMKAGWHRNIM 610

Query: 311 DQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVAS 370
           D              QMM MMEKYA+NLEDLV QRT  + EEK+KTEDLLHRMLP PVA+
Sbjct: 611 D--------------QMMNMMEKYASNLEDLVTQRTGLLLEEKKKTEDLLHRMLPKPVAN 656

Query: 371 RLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
            LT G GVEPE++D VTIYFSDIVGFTAMSAESTP +
Sbjct: 657 CLTNGIGVEPEAFDSVTIYFSDIVGFTAMSAESTPFQ 693

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	413
FB|FBgn0261360	1525	CG42637 [Drosophila melanogast	0.595	0.161	0.636	3.1e-83
FB|FBgn0261688	1525	Gyc76C "Guanylyl cyclase at 76	0.595	0.161	0.636	3.1e-83
FB|FBgn0051183	1417	CG31183 [Drosophila melanogast	0.602	0.175	0.482	7.3e-57
WB|WBGene00020131	1276	gcy-28 [Caenorhabditis elegans	0.602	0.195	0.452	9.2e-57
FB|FBgn0036368	1272	CG10738 [Drosophila melanogast	0.602	0.195	0.472	1.5e-56
UNIPROTKB|P55202	1050	npr2 "Atrial natriuretic pepti	0.593	0.233	0.492	1.4e-53
FB|FBgn0010197	1163	Gyc32E "Guanyl cyclase at 32E"	0.641	0.227	0.445	1.9e-53
UNIPROTKB|P46197	1047	NPR2 "Atrial natriuretic pepti	0.595	0.234	0.479	1.6e-52
UNIPROTKB|G3N2S3	421	NPR2 "Guanylate cyclase" [Bos	0.595	0.584	0.483	1.7e-52
UNIPROTKB|F1PMN5	851	NPR2 "Guanylate cyclase" [Cani	0.595	0.289	0.479	7.3e-52

FB|FBgn0261360 CG42637 [Drosophila melanogaster (taxid:7227)]

 Score = 844 (302.2 bits), Expect = 3.1e-83, P = 3.1e-83
 Identities = 175/275 (63%), Positives = 205/275 (74%)

Query:   144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
             +GM ++H S +  HGNLKSSNCVVTSRW+LQVTDFGLHELR CAEN+SIGEHQ+YR+ LW
Sbjct:   660 KGMIYIHNSQLVYHGNLKSSNCVVTSRWMLQVTDFGLHELRQCAENESIGEHQHYRNQLW 719

Query:   204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-EDC-------- 254
             +APELLR+ H  I G+QK DVYAFA+I++EI  R+GPFG    +EPK   D         
Sbjct:   720 RAPELLRN-H--IHGSQKGDVYAFAIIMYEIFSRKGPFGQIN-FEPKEIVDYVKKLPLKG 775

Query:   255 EEPFRPNLELL--RDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQ 312
             E+PFRP +E +   +SC  +VLAC+RDCWAE PE RP+F  IR RLK M+ GK KNI+DQ
Sbjct:   776 EDPFRPEVESIIEAESCPDYVLACIRDCWAEDPEERPEFSVIRNRLKKMRGGKTKNIMDQ 835

Query:   313 MMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRL 372
             MMEMMEK              YANNLED+V +RT  + EEK KTEDLLHRMLP  VA +L
Sbjct:   836 MMEMMEK--------------YANNLEDIVTERTRLLCEEKMKTEDLLHRMLPQSVAEKL 881

Query:   373 TRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
             T G GVEP SYDLVTIYFSDIVGFTAMSAESTPL+
Sbjct:   882 TMGQGVEPVSYDLVTIYFSDIVGFTAMSAESTPLQ 916

GO:0009190 "cyclic nucleotide biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016849 "phosphorus-oxygen lyase activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

FB|FBgn0261688 Gyc76C "Guanylyl cyclase at 76C" [Drosophila melanogaster (taxid:7227)]

 Score = 844 (302.2 bits), Expect = 3.1e-83, P = 3.1e-83
 Identities = 175/275 (63%), Positives = 205/275 (74%)

Query:   144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
             +GM ++H S +  HGNLKSSNCVVTSRW+LQVTDFGLHELR CAEN+SIGEHQ+YR+ LW
Sbjct:   660 KGMIYIHNSQLVYHGNLKSSNCVVTSRWMLQVTDFGLHELRQCAENESIGEHQHYRNQLW 719

Query:   204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-EDC-------- 254
             +APELLR+ H  I G+QK DVYAFA+I++EI  R+GPFG    +EPK   D         
Sbjct:   720 RAPELLRN-H--IHGSQKGDVYAFAIIMYEIFSRKGPFGQIN-FEPKEIVDYVKKLPLKG 775

Query:   255 EEPFRPNLELL--RDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQ 312
             E+PFRP +E +   +SC  +VLAC+RDCWAE PE RP+F  IR RLK M+ GK KNI+DQ
Sbjct:   776 EDPFRPEVESIIEAESCPDYVLACIRDCWAEDPEERPEFSVIRNRLKKMRGGKTKNIMDQ 835

Query:   313 MMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRL 372
             MMEMMEK              YANNLED+V +RT  + EEK KTEDLLHRMLP  VA +L
Sbjct:   836 MMEMMEK--------------YANNLEDIVTERTRLLCEEKMKTEDLLHRMLPQSVAEKL 881

Query:   373 TRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
             T G GVEP SYDLVTIYFSDIVGFTAMSAESTPL+
Sbjct:   882 TMGQGVEPVSYDLVTIYFSDIVGFTAMSAESTPLQ 916

GO:0004872 "receptor activity" evidence=ISS;NAS;IDA

GO:0004383 "guanylate cyclase activity" evidence=ISS;NAS;IDA

GO:0005886 "plasma membrane" evidence=ISS;NAS

GO:0007165 "signal transduction" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0009190 "cyclic nucleotide biosynthetic process" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0008045 "motor neuron axon guidance" evidence=IMP

GO:0016199 "axon midline choice point recognition" evidence=IGI

GO:0009651 "response to salt stress" evidence=IMP

GO:0008188 "neuropeptide receptor activity" evidence=IDA

FB|FBgn0051183 CG31183 [Drosophila melanogaster (taxid:7227)]

 Score = 597 (215.2 bits), Expect = 7.3e-57, P = 7.3e-57
 Identities = 137/284 (48%), Positives = 179/284 (63%)

Query:   144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA---END--SIGEHQYY 198
             +GM FLH S I  HGNLKSSNCVV SR+VL++TDFGLH LR      E+D  +   H Y+
Sbjct:   705 RGMQFLHSSDIRSHGNLKSSNCVVDSRFVLKITDFGLHTLRRTRFDLESDGGNCNSHAYW 764

Query:   199 RSLLWKAPELLRDTH-APIRGTQKADVYAFAVILHEIIGRRGPF--GGCGLYE--P---- 249
               LLW APELLR  H  P  GTQK DVYAF +I+HEI  R+GPF  G C  YE  P    
Sbjct:   765 SKLLWTAPELLRVEHNRPPEGTQKGDVYAFGIIVHEITTRQGPFYLGRCA-YEKSPQEII 823

Query:   250 ---KGED---CEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
                KG +    ++PFRP LE   D+ +  +   +R CWAE P  RPDF T+++ ++    
Sbjct:   824 ELVKGYNPHRMQKPFRPELEPNGDT-KADINGIIRRCWAEDPAERPDFNTLKSMIRRFNK 882

Query:   304 GKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRM 363
               +               NI+D +++ ME YANNLE+LV +RT + +EEK+K E LL+++
Sbjct:   883 DNETG-------------NIVDNLLKRMELYANNLEELVEERTQDYHEEKKKCEKLLYQL 929

Query:   364 LPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
             LP  VA++L  G  V  E++D VTIYFSDIVGFTA+SAESTP++
Sbjct:   930 LPQSVAAQLISGQPVVAETFDQVTIYFSDIVGFTAISAESTPMQ 973

GO:0004383 "guanylate cyclase activity" evidence=ISS;NAS

GO:0016941 "natriuretic peptide receptor activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0009190 "cyclic nucleotide biosynthetic process" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IKR

GO:0006468 "protein phosphorylation" evidence=IKR

WB|WBGene00020131 gcy-28 [Caenorhabditis elegans (taxid:6239)]

 Score = 595 (214.5 bits), Expect = 9.2e-57, P = 9.2e-57
 Identities = 128/283 (45%), Positives = 178/283 (62%)

Query:   144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN---DSIGEHQYYRS 200
             +G+ FLH S I  HG LKSSNCVV SR+VL+VTDFGLH L HC E    + IGEH YY+ 
Sbjct:   839 KGLFFLHNSEIRSHGRLKSSNCVVDSRFVLKVTDFGLHRL-HCLEEINLEEIGEHAYYKK 897

Query:   201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG-----------LYEP 249
             +LW APELLRD++AP  GTQK D+Y+FA+ILHE++ R+G F               + +P
Sbjct:   898 MLWTAPELLRDSNAPPMGTQKGDIYSFAIILHEMMFRKGVFALENEDLSPNEIVQRVRKP 957

Query:   250 KGEDCEEPFRPNLELLR-----DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDG 304
               ED +EP RP +         D+    +L+ M  CW+E P  RP+  ++R  ++ +   
Sbjct:   958 VSED-QEPLRPWVSETGEGEGDDALNDTLLSLMVACWSEDPHERPEVSSVRKAVRSLNRD 1016

Query:   305 KQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRML 364
              + +             N++D +++ ME+YANNLE LV +RT E   EK+K E+LLH++L
Sbjct:  1017 NETS-------------NLVDNLLKRMEQYANNLEGLVEERTQEYLAEKKKVEELLHQLL 1063

Query:   365 PAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
             P  +A  L  G  V+ ESYD VTIYFSDIVGFT++S++STP++
Sbjct:  1064 PPAIADTLIAGRAVQAESYDCVTIYFSDIVGFTSLSSQSTPMQ 1106

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009190 "cyclic nucleotide biosynthetic process" evidence=IEA

GO:0016849 "phosphorus-oxygen lyase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0006182 "cGMP biosynthetic process" evidence=IDA

GO:0004383 "guanylate cyclase activity" evidence=IDA

GO:0043005 "neuron projection" evidence=IDA

GO:0042048 "olfactory behavior" evidence=IMP

GO:0006935 "chemotaxis" evidence=IMP

GO:0044297 "cell body" evidence=IDA

GO:0007606 "sensory perception of chemical stimulus" evidence=IMP

FB|FBgn0036368 CG10738 [Drosophila melanogaster (taxid:7227)]

 Score = 593 (213.8 bits), Expect = 1.5e-56, P = 1.5e-56
 Identities = 130/275 (47%), Positives = 178/275 (64%)

Query:   144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG-EHQYYR--S 200
             +G+ +LH SPI  HG L +SNC+V SRWV+++TDFGL   +   E+ S   +H   +   
Sbjct:   705 RGVIYLHDSPIRFHGALCTSNCLVDSRWVVKLTDFGLFAFKQGIEDSSTDMQHMSAKCLK 764

Query:   201 LLWKAPELLRDTHAP-IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK-------GE 252
             LL++APELLR   +  + GTQ+ D Y+F ++L+E+  RRGPFG  GL   +        +
Sbjct:   765 LLYRAPELLRQGPSSLVMGTQRGDAYSFGILLYEMHVRRGPFGETGLTPMQCLQKVLQPQ 824

Query:   253 DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQ 312
             D   P+RP+L+ L  + +  V  C+R+CWAE PE RPDF TIR +L+ ++ G + NI D 
Sbjct:   825 DYLNPYRPSLQPLETAFD-CVSECLRECWAERPEDRPDFKTIRTKLRPLRKGMRPNIFDN 883

Query:   313 MMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRL 372
             MM MMEK              YANNLE LV+ RT ++ EEK+KT+ LLH MLP  VA +L
Sbjct:   884 MMAMMEK--------------YANNLEALVDDRTDQLQEEKKKTDALLHEMLPRCVADQL 929

Query:   373 TRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
              +G+ V+PE Y+ V+IYFSDIVGFTAMSAE TPL+
Sbjct:   930 KKGHKVDPEHYEQVSIYFSDIVGFTAMSAECTPLQ 964

GO:0004872 "receptor activity" evidence=ISS

GO:0004383 "guanylate cyclase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0007165 "signal transduction" evidence=ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006182 "cGMP biosynthetic process" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IKR

GO:0004672 "protein kinase activity" evidence=IKR

GO:0007030 "Golgi organization" evidence=IMP

GO:0045792 "negative regulation of cell size" evidence=IMP

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IMP

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

UNIPROTKB|P55202 npr2 "Atrial natriuretic peptide receptor 2" [Anguilla japonica (taxid:7937)]

 Score = 563 (203.2 bits), Expect = 1.4e-53, P = 1.4e-53
 Identities = 134/272 (49%), Positives = 169/272 (62%)

Query:   144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
             +GM FLH S IG HGNLKSSNCVV SR+VL++TD+GL   R   EN+    H  Y   LW
Sbjct:   633 KGMNFLHNSYIGSHGNLKSSNCVVDSRFVLKITDYGLASFRSSCENED--SHALYAKKLW 690

Query:   204 KAPELL-RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGL-YEPKG-----EDCEE 256
              APELL  D H P +GTQK DVY+F +IL EI  R GPF   G+   PK       + ++
Sbjct:   691 TAPELLIYDRHPP-QGTQKGDVYSFGIILQEIALRNGPFYVDGMDLSPKEIVQKVRNGQK 749

Query:   257 P-FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMME 315
             P FRP  +    S E  +L  M  CWAE P  RPDF  I+  +  MK  K          
Sbjct:   750 PYFRPTTDTSCHSEELSIL--MEGCWAEDPADRPDFSYIKIFV--MKLNK---------- 795

Query:   316 MMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRG 375
               E   +I++ ++  ME+YANNLE+LV +RT    EEKRK E+LL+++LP  VA +L RG
Sbjct:   796 --EGSTSILNNLLSRMEQYANNLENLVEERTQAYLEEKRKAENLLYQILPHSVAEQLKRG 853

Query:   376 YGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
               V+ E++D VTIYFSDIVGFT+MSAESTPL+
Sbjct:   854 ETVQAEAFDSVTIYFSDIVGFTSMSAESTPLQ 885

GO:0016941 "natriuretic peptide receptor activity" evidence=ISS

FB|FBgn0010197 Gyc32E "Guanyl cyclase at 32E" [Drosophila melanogaster (taxid:7227)]

 Score = 563 (203.2 bits), Expect = 1.9e-53, P = 1.9e-53
 Identities = 130/292 (44%), Positives = 175/292 (59%)

Query:   124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
             +H D + I+ L++  D +  +GM +LH S I  HGNL+SSNC++ SRWV Q++DFGLHEL
Sbjct:   621 LHLDHMFISSLVS--DIL--KGMIYLHDSEIISHGNLRSSNCLIDSRWVCQISDFGLHEL 676

Query:   184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
             +   E  +  E +  R+L   APELLRD + P RG+QK DVY+F ++L+E+IGR+GP+G 
Sbjct:   677 KAGQEEPNKSELELKRALCM-APELLRDAYRPGRGSQKGDVYSFGILLYEMIGRKGPWGD 735

Query:   244 CGLYEPK---GEDCEEP-----FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
                 + +      C E      FRP L         ++  C+  CW E PE RPD   +R
Sbjct:   736 TAYSKEEIIQFVKCPEMLQHGVFRPALTHTHLDIPDYIRKCLCQCWDEDPEVRPDIRLVR 795

Query:   296 ARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRK 355
               LK ++ G + NI D M+ +MEK              YA NLE LV +RT  +YEEK+K
Sbjct:   796 MHLKELQAGLKPNIFDNMLSIMEK--------------YAYNLEGLVQERTNLLYEEKKK 841

Query:   356 TEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
             T+ LL++MLP PVA  L RG  VE E +D VTI FSDIVGFT +   STP E
Sbjct:   842 TDMLLYQMLPRPVAELLKRGDPVEAECFDCVTILFSDIVGFTELCTTSTPFE 893

GO:0004383 "guanylate cyclase activity" evidence=ISS;NAS

GO:0005886 "plasma membrane" evidence=ISS

GO:0004872 "receptor activity" evidence=ISS;NAS

GO:0006182 "cGMP biosynthetic process" evidence=NAS

GO:0007165 "signal transduction" evidence=ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0009190 "cyclic nucleotide biosynthetic process" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IKR

GO:0004672 "protein kinase activity" evidence=IKR

UNIPROTKB|P46197 NPR2 "Atrial natriuretic peptide receptor 2" [Bos taurus (taxid:9913)]

 Score = 540 (195.1 bits), Expect = 1.6e-52, Sum P(2) = 1.6e-52
 Identities = 130/271 (47%), Positives = 165/271 (60%)

Query:   144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
             +GM FLH S I  HG+LKSSNCVV SR+VL++TD+GL   R  AE D    H  Y   LW
Sbjct:   629 KGMAFLHNSIIASHGSLKSSNCVVDSRFVLKITDYGLASFRSTAEPDD--SHALYAKKLW 686

Query:   204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGL-YEPKG-----EDCEEP 257
              APELL     P  G QKADVY+F +IL EI  R GPF   GL   PK       + + P
Sbjct:   687 TAPELLSGNPLPTTGMQKADVYSFGIILQEIALRSGPFYLEGLDLSPKEIVQKVRNGQRP 746

Query:   258 -FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEM 316
              FRP+++  + + E  VL  M  CWA+ P  RPDF            G+ K  I +  + 
Sbjct:   747 YFRPSIDRTQLN-EELVLL-MERCWAQDPAERPDF------------GQIKGFIRRFNK- 791

Query:   317 MEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGY 376
              E   +I+D ++  ME+YANNLE LV +RT    EEKRK E LL+++LP  VA +L RG 
Sbjct:   792 -EGGTSILDNLLLRMEQYANNLEKLVEERTQAYLEEKRKAEALLYQILPHSVAEQLKRGE 850

Query:   377 GVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
              V+ E++D VTIYFSDIVGFTA+SAESTP++
Sbjct:   851 TVQAEAFDSVTIYFSDIVGFTALSAESTPMQ 881

GO:0042802 "identical protein binding" evidence=ISS

GO:0016941 "natriuretic peptide receptor activity" evidence=ISS

GO:0006182 "cGMP biosynthetic process" evidence=ISS

GO:0004383 "guanylate cyclase activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|G3N2S3 NPR2 "Guanylate cyclase" [Bos taurus (taxid:9913)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 131/271 (48%), Positives = 165/271 (60%)

Query:   144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
             QGM FLH S I  HG+LKSSNCVV SR+VL++TD+GL   R  AE D    H  Y   LW
Sbjct:     3 QGMAFLHNSIIASHGSLKSSNCVVDSRFVLKITDYGLASFRSTAEPDD--SHALYAKKLW 60

Query:   204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGL-YEPKG-----EDCEEP 257
              APELL     P  G QKADVY+F +IL EI  R GPF   GL   PK       + + P
Sbjct:    61 TAPELLSGNPLPTTGMQKADVYSFGIILQEIALRSGPFYLEGLDLSPKEIVQKVRNGQRP 120

Query:   258 -FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEM 316
              FRP+++  + + E  VL  M  CWA+ P  RPDF            G+ K  I +  + 
Sbjct:   121 YFRPSIDRTQLN-EELVLL-MERCWAQDPAERPDF------------GQIKGFIRRFNK- 165

Query:   317 MEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGY 376
              E   +I+D ++  ME+YANNLE LV +RT    EEKRK E LL+++LP  VA +L RG 
Sbjct:   166 -EGGTSILDNLLLRMEQYANNLEKLVEERTQAYLEEKRKAEALLYQILPHSVAEQLKRGE 224

Query:   377 GVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
              V+ E++D VTIYFSDIVGFTA+SAESTP++
Sbjct:   225 TVQAEAFDSVTIYFSDIVGFTALSAESTPMQ 255

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|F1PMN5 NPR2 "Guanylate cyclase" [Canis lupus familiaris (taxid:9615)]

 Score = 543 (196.2 bits), Expect = 7.3e-52, P = 7.3e-52
 Identities = 130/271 (47%), Positives = 165/271 (60%)

Query:   144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
             +GM FLH S I  HG+LKSSNCVV SR+VL++TD+GL   R  AE D    H  Y   LW
Sbjct:   433 KGMAFLHNSIIASHGSLKSSNCVVDSRFVLKITDYGLASFRSTAEPDD--SHALYAKKLW 490

Query:   204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGL-YEPKG-----EDCEEP 257
              APELL     P  G QKADVY+F +IL EI  R GPF   GL   PK       + + P
Sbjct:   491 TAPELLSGNPLPTTGMQKADVYSFGIILQEIALRSGPFYLEGLDLSPKEIVQKVRNSQRP 550

Query:   258 -FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEM 316
              FRP+++  + + E  VL  M  CWA+ P  RPDF            G+ K  I +  + 
Sbjct:   551 YFRPSIDRTQLN-EELVLL-MERCWAQEPAERPDF------------GQIKGFIRRFNK- 595

Query:   317 MEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGY 376
              E   +I+D ++  ME+YANNLE LV +RT    EEKRK E LL+++LP  VA +L RG 
Sbjct:   596 -EGGTSILDNLLLRMEQYANNLEKLVEERTQAYLEEKRKAEALLYQILPHSVAEQLKRGE 654

Query:   377 GVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
              V+ E++D VTIYFSDIVGFTA+SAESTP++
Sbjct:   655 TVQAEAFDSVTIYFSDIVGFTALSAESTPMQ 685

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	4.6.1.2	LOW CONFIDENCE prediction!
3rd Layer	4.6.1	0.691

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	413
pfam00211	184	pfam00211, Guanylate_cyc, Adenylate and Guanylate	2e-23
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-17
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-17
cd07302	177	cd07302, CHD, cyclase homology domain	1e-16
smart00044	194	smart00044, CYCc, Adenylyl- / guanylyl cyclase, ca	7e-15
smart00044	194	smart00044, CYCc, Adenylyl- / guanylyl cyclase, ca	7e-15
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-14
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-14
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-12
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-12
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	4e-12
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-11
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-11
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	4e-11
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-11
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	5e-11
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-11
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-10
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-10
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	2e-10
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-10
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	3e-10
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	6e-10
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-09
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	3e-09
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	3e-09
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	7e-09
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-08
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-08
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-08
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	1e-08
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-08
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	2e-08
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-08
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	3e-08
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-08
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	4e-08
smart00044	194	smart00044, CYCc, Adenylyl- / guanylyl cyclase, ca	5e-08
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	6e-08
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	7e-08
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	7e-08
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-07
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-07
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-07
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	2e-07
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-07
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	2e-07
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	3e-07
pfam00211	184	pfam00211, Guanylate_cyc, Adenylate and Guanylate	4e-07
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	5e-07
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	5e-07
pfam07701	209	pfam07701, HNOBA, Heme NO binding associated	5e-07
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	5e-07
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	5e-07
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	6e-07
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	7e-07
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	7e-07
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	7e-07
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	7e-07
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	8e-07
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	9e-07
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-06
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-06
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-06
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	2e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	3e-06
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	3e-06
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	6e-06
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	6e-06
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	7e-06
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	7e-06
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	9e-06
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	9e-06
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-05
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	2e-05
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	2e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-05
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	2e-05
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	3e-05
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-05
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	5e-05
pfam00211	184	pfam00211, Guanylate_cyc, Adenylate and Guanylate	8e-05
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-04
cd07302	177	cd07302, CHD, cyclase homology domain	2e-04
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	2e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	2e-04
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	2e-04
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	2e-04
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-04
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	3e-04
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	3e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	3e-04
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	4e-04
cd07556	133	cd07556, Nucleotidyl_cyc_III, Class III nucleotidy	4e-04
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	4e-04
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	5e-04
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	6e-04
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	9e-04
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	9e-04
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	0.001
COG2114	227	COG2114, CyaA, Adenylate cyclase, family 3 (some p	0.001
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	0.001
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	0.001
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	0.001
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	0.001
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	0.001
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	0.001
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	0.001
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	0.002
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.002
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	0.002
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	0.002
cd07302	177	cd07302, CHD, cyclase homology domain	0.003
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	0.003
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	0.003
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	0.004

>gnl|CDD|201086 pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain

 Score = 95.8 bits (239), Expect = 2e-23
 Identities = 33/65 (50%), Positives = 42/65 (64%)

Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLT 60
            PRY ++GDTVN ASRMESTG P +IH+S      L     +   ERG V +KGKG++ T
Sbjct: 120 RPRYDVWGDTVNLASRMESTGVPGKIHVSEETYRLLKTREQFEFTERGEVEVKGKGKMET 179

Query: 61  YWLVG 65
           Y+L G
Sbjct: 180 YFLNG 184

Length = 184

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 80.7 bits (200), Expect = 3e-17
 Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 30/164 (18%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
           GM +L       H +L + NC+V    V++++DFGL      + +  + +  YY+     
Sbjct: 115 GMEYLESKNF-IHRDLAARNCLVGENLVVKISDFGL------SRD--LYDDDYYKVKGGK 165

Query: 203 ----WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE--PKGEDC 254
               W APE L++     + T K+DV++F V+L EI   G   P+ G    E     +  
Sbjct: 166 LPIRWMAPESLKEG----KFTSKSDVWSFGVLLWEIFTLGEE-PYPGMSNAEVLEYLKKG 220

Query: 255 EEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
               +P       +C P +   M  CWAE PE RP F  +   L
Sbjct: 221 YRLPKP------PNCPPELYKLMLQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 80.3 bits (199), Expect = 3e-17
 Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 48/173 (27%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
           GM +L       H +L + NC+V    V++++DFGL      + +  + +  YYR     
Sbjct: 114 GMEYLESKNF-IHRDLAARNCLVGENLVVKISDFGL------SRD--LYDDDYYRKRGGK 164

Query: 203 ----WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF 258
               W APE L++     + T K+DV++F V+L EI                    E+P+
Sbjct: 165 LPIRWMAPESLKEG----KFTSKSDVWSFGVLLWEIF----------------TLGEQPY 204

Query: 259 R--PNLELLR-----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
               N E+L             +C P +   M  CWAE PE RP F  +   L
Sbjct: 205 PGMSNEEVLEYLKNGYRLPQPPNCPPELYDLMLQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|143636 cd07302, CHD, cyclase homology domain

 Score = 76.8 bits (190), Expect = 1e-16
 Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGK-GEVL 59
            P Y + GDTVN A+R+ES  +P +I +S A    L    G+  EE G V +KGK G V 
Sbjct: 115 RPEYTVIGDTVNLAARLESLAKPGQILVSEATYELL-GDAGFEFEELGEVELKGKSGPVR 173

Query: 60  TYWL 63
            Y L
Sbjct: 174 VYRL 177

Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide. Length = 177

>gnl|CDD|214485 smart00044, CYCc, Adenylyl- / guanylyl cyclase, catalytic domain

 Score = 72.3 bits (178), Expect = 7e-15
 Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)

Query: 351 EEKRKTEDLLHRMLPAPVASRLTRGYG-VEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
           EEK+KT+ LL ++LPA VA +L RG   V  ESYD VTI FSDIVGFT++ + STP +
Sbjct: 1   EEKKKTDRLLDQLLPASVAEQLKRGGSPVPAESYDNVTILFSDIVGFTSLCSTSTPEQ 58

Present in two copies in mammalian adenylyl cyclases. Eubacterial homologues are known. Two residues (Asn, Arg) are thought to be involved in catalysis. These cyclases have important roles in a diverse range of cellular processes. Length = 194

>gnl|CDD|214485 smart00044, CYCc, Adenylyl- / guanylyl cyclase, catalytic domain

 Score = 72.3 bits (178), Expect = 7e-15
 Identities = 26/45 (57%), Positives = 31/45 (68%)

Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVE 45
           MPRYCLFGDTVN ASRMES G+P +I +S    + L + GG  V 
Sbjct: 150 MPRYCLFGDTVNLASRMESAGDPGQIQVSEETYSLLARRGGQFVF 194

Present in two copies in mammalian adenylyl cyclases. Eubacterial homologues are known. Two residues (Asn, Arg) are thought to be involved in catalysis. These cyclases have important roles in a diverse range of cellular processes. Length = 194

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 72.9 bits (180), Expect = 1e-14
 Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 33/167 (19%)

Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           +GM +L        H +L + NC+VT   V++++DFGL        +  I E  YYR   
Sbjct: 113 KGMEYLES--KNFVHRDLAARNCLVTENLVVKISDFGL--------SRDIYEDDYYRKRG 162

Query: 203 -------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPKG-- 251
                  W APE L+D     + T K+DV++F V+L EI   G + P+ G    E     
Sbjct: 163 GGKLPIKWMAPESLKDG----KFTSKSDVWSFGVLLWEIFTLGEQ-PYPGMSNEEVLELL 217

Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           ED     RP      ++C   +   M  CWA  PE RP F  +   L
Sbjct: 218 EDGYRLPRP------ENCPDELYELMLQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 71.4 bits (176), Expect = 4e-14
 Identities = 49/174 (28%), Positives = 70/174 (40%), Gaps = 47/174 (27%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
           GM +L       H +L + NC+V    V++++DFGL   R   ++D      YYR     
Sbjct: 117 GMEYLASKKF-VHRDLAARNCLVGEDLVVKISDFGL--SRDVYDDD------YYRKKTGG 167

Query: 203 -----WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCGLYEPKGEDCEE 256
                W APE L+D       T K+DV++F V+L EI      P+ G             
Sbjct: 168 KLPIRWMAPESLKDG----IFTSKSDVWSFGVLLWEIFTLGATPYPGL------------ 211

Query: 257 PFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
               N E+L            + C   +   M  CW   PE RP F  +  RL+
Sbjct: 212 ---SNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 67.5 bits (165), Expect = 1e-12
 Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 25/163 (15%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----S 200
           GM +L       H +L + NC+V     ++++DFGL           I    YYR    S
Sbjct: 136 GMEYLSSHHF-VHRDLAARNCLVGEGLTVKISDFGLSRD--------IYSADYYRVQSKS 186

Query: 201 LL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEP 257
           LL   W  PE +       + T ++D+++F V+L EI      +G    Y    ++  E 
Sbjct: 187 LLPVRWMPPEAILYG----KFTTESDIWSFGVVLWEIFS----YGLQPYYGFSNQEVIEM 238

Query: 258 FRPNLEL-LRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
            R    L   + C   V A M +CW E P  RP F  I  RL+
Sbjct: 239 IRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLR 281

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 66.3 bits (162), Expect = 2e-12
 Identities = 48/166 (28%), Positives = 66/166 (39%), Gaps = 33/166 (19%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS--- 200
           +GM +L       H +L + N +V    V +V DFGL  L        I E  Y  S   
Sbjct: 115 EGMAYLEEQNS-IHRDLAARNILVGEDLVCKVADFGLARL--------IKEDVYLSSDKK 165

Query: 201 --LLWKAPELLRDTHAPIRGT--QKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEE 256
               W APE      A   GT   K+DV++F ++L+E+       G    Y   G +  E
Sbjct: 166 IPYKWTAPE------AASHGTFSTKSDVWSFGILLYEMFTY----GQVP-YP--GMNNHE 212

Query: 257 PFRPNLELLR----DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
            +       R      C   +   M +CWA  PE RP F  +R  L
Sbjct: 213 VYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREEL 258

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 65.9 bits (161), Expect = 4e-12
 Identities = 60/209 (28%), Positives = 83/209 (39%), Gaps = 44/209 (21%)

Query: 111 AHRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVT 168
           A RP                +T   L++F   + R GM FL       H +L + N +VT
Sbjct: 109 ARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVAR-GMEFLASKKC-IHRDLAARNVLVT 166

Query: 169 SRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRD---THAPIRG 218
              V+++ DFGL    H  +        YYR        + W APE L D   TH     
Sbjct: 167 EDHVMKIADFGLARDIHHID--------YYRKTTNGRLPVKWMAPEALFDRVYTHQ---- 214

Query: 219 TQKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPF 272
              +DV++F V+L EI    G P+ G  + E      +G   E+P          +C   
Sbjct: 215 ---SDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKP---------QNCTQE 262

Query: 273 VLACMRDCWAEAPESRPDFPTIRARLKHM 301
           +   MRDCW E P  RP F  +   L  M
Sbjct: 263 LYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 64.2 bits (156), Expect = 1e-11
 Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 16/157 (10%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +L    +  H +L + N +V+   V +V+DFGL      A   S+G       + W
Sbjct: 111 EGMEYLESKKL-VHRDLAARNILVSEDGVAKVSDFGL------ARVGSMGVDNSKLPVKW 163

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L+      + + K+DV+++ V+L E+    R P+    L E K E  E+ +R   
Sbjct: 164 TAPEALKHK----KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK-ECVEKGYRMEP 218

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
               + C   V   M  CW   P+ RP F  +R +L+
Sbjct: 219 P---EGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 63.6 bits (155), Expect = 2e-11
 Identities = 47/194 (24%), Positives = 75/194 (38%), Gaps = 33/194 (17%)

Query: 116 ETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQV 175
           + L+          +I+ L ++   I   GM +L       H +L + N ++ S   +++
Sbjct: 84  DRLRKD---ALGHFLISTLCDYAVQIA-NGMRYLESKRF-IHRDLAARNILLASDDKVKI 138

Query: 176 TDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKADVYAFA 228
            DFGL  +R   +N+      +Y           W APE LR        +  +DV+ F 
Sbjct: 139 GDFGL--MRALPQNE-----DHYVMEEHLKVPFAWCAPESLRT----RTFSHASDVWMFG 187

Query: 229 VILHEII--GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR--DSCEPFVLACMRDCWAEA 284
           V L E+   G   P+ G       G    +      E L   ++C   +   M  CWA  
Sbjct: 188 VTLWEMFTYGEE-PWAGL-----SGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHN 241

Query: 285 PESRPDFPTIRARL 298
           P  RP F  +R  L
Sbjct: 242 PADRPTFAALREFL 255

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 62.7 bits (153), Expect = 4e-11
 Identities = 53/170 (31%), Positives = 74/170 (43%), Gaps = 39/170 (22%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----S 200
           GM +L       H +L + NC+V     +++ DFG+           I E  YYR     
Sbjct: 131 GMAYLAAKKF-VHRDLAARNCMVAEDLTVKIGDFGMTRD--------IYETDYYRKGGKG 181

Query: 201 LL---WKAPELLRDTHAPIRG--TQKADVYAFAVILHEIIGRRGPFGGCGLYE-P-KGED 253
           LL   W APE L+D      G  T K+DV++F V+L E+           L E P +G  
Sbjct: 182 LLPVRWMAPESLKD------GVFTTKSDVWSFGVVLWEM---------ATLAEQPYQGLS 226

Query: 254 CEEPFR----PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
            EE  +         L ++C   +L  MR CW   P+ RP F  I + LK
Sbjct: 227 NEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 61.9 bits (151), Expect = 4e-11
 Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 8/92 (8%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           +G+ +LH + I  H +LK  N ++ S    +++ DFGL   +    + S+       +  
Sbjct: 103 EGLEYLHSNGI-IHRDLKPENILLDSDNGKVKLADFGLS--KLLTSDKSL-LKTIVGTPA 158

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEI 234
           + APE+L         ++K+D+++  VIL+E+
Sbjct: 159 YMAPEVLLGKG---YYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 62.0 bits (151), Expect = 5e-11
 Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 26/163 (15%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +L       H +L + N +V+   V +V+DFGL      A+  S G+      + W
Sbjct: 113 EGMEYLEEKNF-VHRDLAARNVLVSEDLVAKVSDFGL------AKEASQGQDSGKLPVKW 165

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEI--IGR----RGPFGGCGLYEPKGEDCEEP 257
            APE LR+     + + K+DV++F ++L EI   GR    R P      +  KG   E P
Sbjct: 166 TAPEALREK----KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAP 221

Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
                    + C P V   M+DCW   P  RP F  +R +L  
Sbjct: 222 ---------EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 62.4 bits (152), Expect = 6e-11
 Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 30/174 (17%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS--- 200
           +GM +L       H +L + N +V S  +++++DFGL ++      D      YY     
Sbjct: 120 KGMDYLGSQRY-IHRDLAARNILVESEDLVKISDFGLAKV---LPED----KDYYYVKEP 171

Query: 201 ----LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF----------GGCGL 246
               + W APE LR +    + +  +DV++F V L+E+     P            G   
Sbjct: 172 GESPIFWYAPECLRTS----KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQ 227

Query: 247 YEPKGEDCEEPFRPNLELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
            +       E  +    L R  SC   V   M+ CW   P+ RP F  +   + 
Sbjct: 228 GQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVD 281

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 61.5 bits (150), Expect = 1e-10
 Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 22/164 (13%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLL 202
           +G+ +LH + I  H +LK  N ++    V+++ DFGL +        S      +  +  
Sbjct: 109 RGLEYLHSNGI-IHRDLKPENILLDENGVVKIADFGLAKKLLK----SSSSLTTFVGTPW 163

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCE------E 256
           + APE+L           K DV++  VIL+E++  + PF G  + +             E
Sbjct: 164 YMAPEVLLG-GNGY--GPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLE 220

Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
              P      +  +      ++ C  + P  RP    I   L+H
Sbjct: 221 FDEPKWSSGSEEAKDL----IKKCLNKDPSKRPTAEEI---LQH 257

Length = 260

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 61.0 bits (148), Expect = 1e-10
 Identities = 52/164 (31%), Positives = 71/164 (43%), Gaps = 24/164 (14%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 116 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 171

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGL---YE--PKGEDCEEP 257
            APE L    A  + + K+DV+AF V+L EI      P+ G  L   YE   KG   E P
Sbjct: 172 TAPESL----AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERP 227

Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                    + C P V   MR CW   P  RP F  I    + M
Sbjct: 228 ---------EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 60.5 bits (147), Expect = 2e-10
 Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 30/161 (18%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS--- 200
           + M +L  +    H +L + NC+V    V++V+DFGL           + + QY  S   
Sbjct: 111 EAMEYLESNGF-IHRDLAARNCLVGEDNVVKVSDFGLARY--------VLDDQYTSSQGT 161

Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYEPKGEDCEE 256
              + W  PE+    ++  R + K+DV++F V++ E+    + P+      E   E    
Sbjct: 162 KFPVKWAPPEVF--DYS--RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV-ESVSA 216

Query: 257 PFR---PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
            +R   P L          V   M  CW E PE RP F  +
Sbjct: 217 GYRLYRPKL------APTEVYTIMYSCWHEKPEDRPAFKKL 251

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 60.4 bits (146), Expect = 2e-10
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 26/161 (16%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +   F+HR       +L + N +V+   V +V+DFGL       +  S  +      + W
Sbjct: 119 EANNFVHR-------DLAARNVLVSEDNVAKVSDFGL------TKEASSTQDTGKLPVKW 165

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYE--PKGEDCEEPFRP 260
            APE LR+     + + K+DV++F ++L EI    R P+    L +  P+ E   +   P
Sbjct: 166 TAPEALREK----KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 221

Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                 D C P V   M+ CW     +RP F  +R +L+H+
Sbjct: 222 ------DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 60.4 bits (146), Expect = 3e-10
 Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 45/231 (19%)

Query: 100 NLLDAVKNHK---------IAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLH 150
           NLLD ++  +         IA+    TL  +            L++F   + R GM +L 
Sbjct: 94  NLLDFLRKSRVLETDPAFAIANSTASTLSSQ-----------QLLHFAADVAR-GMDYLS 141

Query: 151 RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR 210
           +     H +L + N +V   +V ++ DFGL   +      ++G       + W A E L 
Sbjct: 142 QKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR----LPVRWMAIESLN 196

Query: 211 DTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGG--CG-LYE--PKGEDCEEPFRPNLEL 264
            +      T  +DV+++ V+L EI+   G P+ G  C  LYE  P+G   E+P       
Sbjct: 197 YSVY----TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPL------ 246

Query: 265 LRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMME 315
              +C+  V   MR CW E P  RP F  I   L  M + ++  +   + E
Sbjct: 247 ---NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYE 294

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 59.6 bits (144), Expect = 6e-10
 Identities = 52/174 (29%), Positives = 76/174 (43%), Gaps = 36/174 (20%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
           GM +L       H +L + N +V      ++ DFGL          S GE  Y +  +  
Sbjct: 131 GMQYLSEKQF-IHRDLAARNVLVGENLASKIADFGL----------SRGEEVYVKKTMGR 179

Query: 203 ----WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGG--CG-LYE--PKGE 252
               W A E L  +      T K+DV++F V+L EI+   G P+ G  C  LYE  P+G 
Sbjct: 180 LPVRWMAIESLNYSVY----TTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 235

Query: 253 DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ 306
             E+P          +C+  V   MR CW + P  RP F  I  +L  M + ++
Sbjct: 236 RMEKP---------RNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 46/169 (27%), Positives = 70/169 (41%), Gaps = 40/169 (23%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
           GM +L       H +L + N +V    V ++ DFGL  L    E+D     +  +  + W
Sbjct: 115 GMAYLESRNY-IHRDLAARNILVGENLVCKIADFGLARL---IEDDEYTAREGAKFPIKW 170

Query: 204 KAPELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGC-----------GLYEP 249
            APE      A   G  T K+DV++F ++L EI+   R P+ G            G   P
Sbjct: 171 TAPE------AANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMP 224

Query: 250 KGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           +  +C E               + L  M  CW + PE RP F  +++ L
Sbjct: 225 RPPNCPEEL-------------YDL--MLQCWDKDPEERPTFEYLQSFL 258

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 57.3 bits (138), Expect = 3e-09
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 23/165 (13%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLL 202
           +GM +L    +  H +L + N +V     ++++DFGL   R   E DS  +    R  + 
Sbjct: 138 RGMQYLAEMKL-VHRDLAARNVLVAEGRKMKISDFGLS--RDVYEEDSYVKRSKGRIPVK 194

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCG---LYE--PKGEDCEE 256
           W A E L D H     T ++DV++F V+L EI+   G P+ G     L+     G   E 
Sbjct: 195 WMAIESLFD-HIY---TTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMER 250

Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           P         ++C   +   M  CW + P+ RP F  I   L+ M
Sbjct: 251 P---------ENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 57.0 bits (138), Expect = 3e-09
 Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 51/204 (25%)

Query: 100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGN 159
            LLD V+NHK     Q                 YL+N+   I + GM++L    +  H +
Sbjct: 94  CLLDYVRNHKDNIGSQ-----------------YLLNWCVQIAK-GMSYLEEKRL-VHRD 134

Query: 160 LKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-----LLWKAPELLRDTHA 214
           L + N +V +   +++TDFGL +L        + E +Y+       + W A E +     
Sbjct: 135 LAARNVLVKTPQHVKITDFGLAKLL------DVDEKEYHAEGGKVPIKWMALESILHR-- 186

Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
               T K+DV+++ V + E++  G + P+ G    E      KGE   +P          
Sbjct: 187 --IYTHKSDVWSYGVTVWELMTFGAK-PYEGIPAVEIPDLLEKGERLPQP---------P 234

Query: 268 SCEPFVLACMRDCWAEAPESRPDF 291
            C   V   +  CW    ESRP F
Sbjct: 235 ICTIDVYMVLVKCWMIDAESRPTF 258

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 55.9 bits (135), Expect = 7e-09
 Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 17/159 (10%)

Query: 145 GMTFLH-RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSLL 202
           GM +L  ++ I  H +L + NC+V    VL+++DFG+           S G  Q    + 
Sbjct: 105 GMEYLESKNCI--HRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI--PIK 160

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYEPKGEDCEEPFR-P 260
           W APE L       R T ++DV+++ ++L E       P+ G    + + E  E  +R P
Sbjct: 161 WTAPEALNYG----RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTR-ERIESGYRMP 215

Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             +L    C   +   M  CWA  PE+RP F  I   L+
Sbjct: 216 APQL----CPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 55.6 bits (135), Expect = 1e-08
 Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 23/162 (14%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLL 202
             + +LH   I  H +LK  N ++     +++ DFGL       + D   +   +  +  
Sbjct: 108 SALEYLHSKGI-VHRDLKPENILLDEDGHVKLADFGL-----ARQLDPGEKLTTFVGTPE 161

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG----LYEPKGEDCEEPF 258
           + APE+L          +  D+++  VIL+E++  + PF G      L++  G+      
Sbjct: 162 YMAPEVLLGKGY----GKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFP 217

Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
            P  ++  ++ +      +R    + PE R    T    L+H
Sbjct: 218 PPEWDISPEAKD-----LIRKLLVKDPEKR---LTAEEALQH 251

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 55.2 bits (133), Expect = 1e-08
 Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 16/151 (10%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +L R+    H +L + NC+V+S  V++V+DFG+   R+  +++          + W
Sbjct: 111 EGMEYLERNSF-IHRDLAARNCLVSSTGVVKVSDFGM--TRYVLDDEYTSSSGAKFPVKW 167

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCE--EPFRP 260
             PE+   +    + + K+DV++F V++ E+    + PF     YE           +RP
Sbjct: 168 SPPEVFNFS----KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRP 223

Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRPDF 291
            L          V   M  CW E PE RP F
Sbjct: 224 KL------ASMTVYEVMYSCWHEKPEGRPTF 248

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 55.3 bits (133), Expect = 1e-08
 Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 28/157 (17%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +L  S +  H +L + NC+V    V++V+DFG+   R   ++           + W
Sbjct: 111 EGMAYLESSNV-IHRDLAARNCLVGENQVVKVSDFGMT--RFVLDDQYTSSTGTKFPVKW 167

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-----EDCEEP 257
            +PE+   +    + + K+DV++F V++ E+    + P      YE +      E     
Sbjct: 168 SSPEVFSFS----KYSSKSDVWSFGVLMWEVFSEGKTP------YENRSNSEVVETINAG 217

Query: 258 FR---PNLELLRDSCEPFVLACMRDCWAEAPESRPDF 291
           FR   P L          V   M+ CW E PE RP F
Sbjct: 218 FRLYKPRL------ASQSVYELMQHCWKERPEDRPSF 248

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 55.1 bits (132), Expect = 1e-08
 Identities = 51/169 (30%), Positives = 74/169 (43%), Gaps = 36/169 (21%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
           GM +L +     H +L + N +V   +V ++ DFGL          S G+  Y +  +  
Sbjct: 124 GMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGL----------SRGQEVYVKKTMGR 172

Query: 203 ----WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGG--CG-LYE--PKGE 252
               W A E L  +      T  +DV+++ V+L EI+   G P+ G  C  LYE  P+G 
Sbjct: 173 LPVRWMAIESLNYSVY----TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 228

Query: 253 DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
             E+P          +C+  V   MR CW E P  RP F  I   L  M
Sbjct: 229 RLEKP---------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 54.8 bits (132), Expect = 2e-08
 Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 29/165 (17%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----S 200
           GM +L  S    H +L + NC+V    V+++ DFG+   R     D      YYR    +
Sbjct: 134 GMVYL-ASQHFVHRDLATRNCLVGYDLVVKIGDFGMS--RDVYTTD------YYRVGGHT 184

Query: 201 LL---WKAPE--LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCE 255
           +L   W  PE  + R      + T ++DV++F V+L EI      +G    Y    E+  
Sbjct: 185 MLPIRWMPPESIMYR------KFTTESDVWSFGVVLWEIF----TYGKQPWYGLSNEEVI 234

Query: 256 EPFRPNLELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           E       L R  +C   V   M  CW   P+ R +   I  RL+
Sbjct: 235 ECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 54.4 bits (131), Expect = 2e-08
 Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 38/183 (20%)

Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM +L       H +L + NC++   + ++V DFGL    +  E  S+ 
Sbjct: 100 LIGFGLQVAK-GMEYLASKKF-VHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157

Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------------ 240
            H   +  + W A E L+ T    + T K+DV++F V+L E++ R  P            
Sbjct: 158 NHTGAKLPVKWMALESLQ-TQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITV 213

Query: 241 --FGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
               G  L +P  E C +P               +   M  CW   PE RP F  + +R+
Sbjct: 214 YLLQGRRLLQP--EYCPDP---------------LYEVMLSCWHPKPEMRPTFSELVSRI 256

Query: 299 KHM 301
           + +
Sbjct: 257 EQI 259

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 54.3 bits (130), Expect = 2e-08
 Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 13/167 (7%)

Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L++F   I  +GM F+ +     H +L+++N +V++  V ++ DFGL   R   +N+   
Sbjct: 104 LIDFSAQIA-EGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGL--ARVIEDNEYTA 159

Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGE 252
                  + W APE +      I    K+DV++F ++L EI+   R P+ G    E    
Sbjct: 160 REGAKFPIKWTAPEAINFGSFTI----KSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-R 214

Query: 253 DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             E  +R       ++C   +   M  CW   PE RP F  I++ L 
Sbjct: 215 ALERGYRMPRP---ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 258

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 54.3 bits (130), Expect = 3e-08
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 33/167 (19%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+ +    H +L + NC+V   + +++ DFG+           I E  YYR     
Sbjct: 131 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 181

Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
              + W +PE L+D       T  +DV++F V+L EI      P+        +G   E+
Sbjct: 182 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPY--------QGMSNEQ 229

Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             R  +E  LL   D+C   +   MR CW   P+ RP F  I + +K
Sbjct: 230 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 54.0 bits (130), Expect = 3e-08
 Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 58/206 (28%)

Query: 128 IIIITYLMNFGD-------------GIPRQ---------GMTFLH-RSPIGCHGNLKSSN 164
           I I+T LM +G               +P+          GM +L  ++ I  H +L + N
Sbjct: 76  IYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYI--HRDLAARN 133

Query: 165 CVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADV 224
            +V    + +V DFGL   R   E+           + W APE         R + K+DV
Sbjct: 134 VLVGENNICKVADFGLA--RVIKEDIYEAREGAKFPIKWTAPEAALYN----RFSIKSDV 187

Query: 225 YAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSCEPF 272
           ++F ++L EI+   R P+ G                 N E+L+             C   
Sbjct: 188 WSFGILLTEIVTYGRMPYPG---------------MTNAEVLQQVDQGYRMPCPPGCPKE 232

Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
           +   M DCW E P+ RP F T++ +L
Sbjct: 233 LYDIMLDCWKEDPDDRPTFETLQWKL 258

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 53.9 bits (129), Expect = 4e-08
 Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 25/163 (15%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----S 200
           GM FL    +  H +L + N +V  +  ++++D GL    + A+        YY+    S
Sbjct: 136 GMEFLSSHHV-VHKDLATRNVLVFDKLNVKISDLGLFREVYAAD--------YYKLMGNS 186

Query: 201 LL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEP 257
           LL   W +PE +      I     +D++++ V+L E+    G    CG      +D  E 
Sbjct: 187 LLPIRWMSPEAIMYGKFSI----DSDIWSYGVVLWEVFSY-GLQPYCGY---SNQDVIEM 238

Query: 258 FRPNLELL-RDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
            R    L   D C  +V   M +CW E P  RP F  I +RL+
Sbjct: 239 IRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|214485 smart00044, CYCc, Adenylyl- / guanylyl cyclase, catalytic domain

 Score = 52.6 bits (127), Expect = 5e-08
 Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 79  VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
            SGLP +    HA  IA  +L++++ +K   + HR +E L++RIGIH+
Sbjct: 92  ASGLPEEALVDHAELIADEALDMVEELKTVLVQHR-EEGLRVRIGIHT 138

Present in two copies in mammalian adenylyl cyclases. Eubacterial homologues are known. Two residues (Asn, Arg) are thought to be involved in catalysis. These cyclases have important roles in a diverse range of cellular processes. Length = 194

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 53.1 bits (127), Expect = 6e-08
 Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 16/158 (10%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+S+N +V    V ++ DFGL  L    +N+          + W 
Sbjct: 114 GMAYIERMNY-IHRDLRSANILVGDGLVCKIADFGLARL--IEDNEYTARQGAKFPIKWT 170

Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E++ + R P+ G    E   E  E  +R  
Sbjct: 171 APE------AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL-EQVERGYRMP 223

Query: 262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
                  C   +   M  CW + PE RP F  +++ L+
Sbjct: 224 CP---QDCPISLHELMLQCWKKDPEERPTFEYLQSFLE 258

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 53.1 bits (127), Expect = 7e-08
 Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 13/171 (7%)

Query: 129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE 188
           +++  L++F   I  +GM ++ R     H +L+++N +V+   + ++ DFGL   R   +
Sbjct: 100 VLLPKLIDFSAQIA-EGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGL--ARVIED 155

Query: 189 NDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
           N+          + W APE +      I    K+DV++F ++L+EI+     +G      
Sbjct: 156 NEYTAREGAKFPIKWTAPEAINFGSFTI----KSDVWSFGILLYEIV----TYGKIPYPG 207

Query: 249 PKGEDCEEPFRPNLELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
               D     +    + R ++C   +   M+ CW E  E RP F  +++ L
Sbjct: 208 MSNSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVL 258

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 52.8 bits (126), Expect = 7e-08
 Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 16/158 (10%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V ++ DFGL  L    +N+          + W 
Sbjct: 114 GMAYIERMNY-IHRDLRAANILVGDNLVCKIADFGLARL--IEDNEYTARQGAKFPIKWT 170

Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E++ + R P+ G    E   E  E  +R  
Sbjct: 171 APE------AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVL-EQVERGYRMP 223

Query: 262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
                  C   +   M+ CW + P+ RP F  I++ L+
Sbjct: 224 CP---QGCPESLHELMKLCWKKDPDERPTFEYIQSFLE 258

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 20/161 (12%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+ R     H +L+++N +V+     ++ DFGL   R   +N+          + W
Sbjct: 113 EGMAFIERKNY-IHRDLRAANILVSETLCCKIADFGL--ARLIEDNEYTAREGAKFPIKW 169

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFR-- 259
            APE +      I    K+DV++F ++L EI+   R P+ G  +  P+  ++ E  +R  
Sbjct: 170 TAPEAINYGTFTI----KSDVWSFGILLTEIVTYGRIPYPG--MTNPEVIQNLERGYRMP 223

Query: 260 -PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
            P      D+C   +   MR CW E PE RP F  +R+ L+
Sbjct: 224 RP------DNCPEELYELMRLCWKEKPEERPTFEYLRSVLE 258

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 43/170 (25%), Positives = 65/170 (38%), Gaps = 49/170 (28%)

Query: 146 MTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR------ 199
           + F+HR       +L + NC+V   + +++ DFG+   R+   +D      YYR      
Sbjct: 149 LNFVHR-------DLATRNCLVGKNYTIKIADFGMS--RNLYSSD------YYRVQGRAP 193

Query: 200 -SLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEI--IGRRGPFG-----------GC 244
             + W A E +L         T K+DV+AF V L EI  + R  P+            G 
Sbjct: 194 LPIRWMAWESVLLGKF-----TTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGH 248

Query: 245 GLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
              +   +      RP        C   +   M +CW    E RP F  I
Sbjct: 249 FFRDDGRQIYLP--RPPN------CPKDIYELMLECWRRDEEDRPTFREI 290

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 52.3 bits (125), Expect = 1e-07
 Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 31/166 (18%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----S 200
           GM +L  S    H +L + N ++  +  ++++D GL    + A+        YYR    S
Sbjct: 136 GMEYL-SSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSAD--------YYRVQPKS 186

Query: 201 LL---WKAPELLRDTHAPIRG--TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCE 255
           LL   W  PE      A + G  +  +D+++F V+L EI      FG    Y    ++  
Sbjct: 187 LLPIRWMPPE------AIMYGKFSSDSDIWSFGVVLWEIFS----FGLQPYYGFSNQEVI 236

Query: 256 EPFRPNLELL--RDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           E  R   +LL   + C P + + M +CW E P  RP F  I  RL+
Sbjct: 237 EMVRKR-QLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 51.6 bits (123), Expect = 2e-07
 Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 21/160 (13%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI-----GEHQYYR 199
           GM +L  S    H +L + NC+VT + VL+++DFG+       E D +     G  Q   
Sbjct: 106 GMEYLE-SKHCIHRDLAARNCLVTEKNVLKISDFGMSR----EEEDGVYASTGGMKQI-- 158

Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR 259
            + W APE L       R + ++DV++F ++L E        G         +   E   
Sbjct: 159 PVKWTAPEALNYG----RYSSESDVWSFGILLWEAFS----LGAVPYANLSNQQTREAIE 210

Query: 260 PNLELL-RDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
             + L   + C   V   M  CW   P  RP F T+   L
Sbjct: 211 QGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQEL 250

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 42/182 (23%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---- 199
           +GM +LH S    H +L + N ++ +  ++++ DFGL   +   E      H+YYR    
Sbjct: 118 EGMAYLH-SQHYIHRDLAARNVLLDNDRLVKIGDFGL--AKAVPEG-----HEYYRVRED 169

Query: 200 ---SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEE 256
               + W A E L++     + +  +DV++F V L+E++        C   +   +  EE
Sbjct: 170 GDSPVFWYAVECLKEN----KFSYASDVWSFGVTLYELLTH------CDSKQSPPKKFEE 219

Query: 257 PFRPN---------LELLR--------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
              P          +ELL          +C   V   M++CW    + RP F ++   LK
Sbjct: 220 MIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILK 279

Query: 300 HM 301
            M
Sbjct: 280 EM 281

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 51.5 bits (123), Expect = 2e-07
 Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 35/165 (21%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----- 199
            + F+HR       +L + NC+V    V+++ DFG+           I    YYR     
Sbjct: 140 SLHFVHR-------DLATRNCLVGQGLVVKIGDFGMSR--------DIYSTDYYRVGGRT 184

Query: 200 --SLLWKAPE--LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCE 255
              + W  PE  L R      + T ++D+++F V+L EI      +G    Y+    +  
Sbjct: 185 MLPIRWMPPESILYR------KFTTESDIWSFGVVLWEIF----TYGKQPWYQLSNTEAI 234

Query: 256 EPFRPNLELLRD-SCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           E      EL R  +C P V A M+ CW   P+ R     I +RL+
Sbjct: 235 ECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 51.6 bits (123), Expect = 3e-07
 Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 35/161 (21%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS--- 200
           +GM +L  S    H +L + N +VT   V+++ DFGL           I    YY+    
Sbjct: 151 RGMEYL-ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--------DIHHIDYYKKTTN 201

Query: 201 ----LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PK 250
               + W APE L D       T ++DV++F V+L EI    G P+ G  + E      +
Sbjct: 202 GRLPVKWMAPEALFDRIY----THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 257

Query: 251 GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF 291
           G   ++P          +C   +   MRDCW   P  RP F
Sbjct: 258 GHRMDKP---------SNCTNELYMMMRDCWHAVPSQRPTF 289

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|201086 pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 18/30 (60%), Positives = 23/30 (76%)

Query: 378 VEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
           V  +SYD VTI F+DIVGFTA+S+  +P E
Sbjct: 1   VYAQSYDNVTILFADIVGFTALSSRHSPEE 30

Length = 184

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 50.6 bits (121), Expect = 5e-07
 Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 56/178 (31%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTS-----RWVLQVTDFGLHELRHCAENDSIGEHQYY 198
           + M F+HR       +L + NC+V+        V+++ DFGL   R   ++D      YY
Sbjct: 123 EQMHFIHR-------DLAARNCLVSEKGYDADRVVKIGDFGL--ARDIYKSD------YY 167

Query: 199 R----SLL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG 251
           R     LL   W APE L D     + T ++DV++F V++ EI+      G     +P  
Sbjct: 168 RKEGEGLLPVRWMAPESLLDG----KFTTQSDVWSFGVLMWEIL----TLG----QQPY- 214

Query: 252 EDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
                P   N E+L+           ++C   +   M +CWA+ P  RP F  I+  L
Sbjct: 215 -----PALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEIL 267

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 50.7 bits (121), Expect = 5e-07
 Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 63/207 (30%)

Query: 113 RPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWV 172
           RP  TL+  I + ++I                GM +L+      H +L + NC+V   + 
Sbjct: 113 RPPPTLQEMIQMAAEI--------------ADGMAYLNAKKF-VHRDLAARNCMVAHDFT 157

Query: 173 LQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKADVY 225
           +++ DFG+           I E  YYR        + W APE L+D       T  +D++
Sbjct: 158 VKIGDFGM--------TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVF----TTSSDMW 205

Query: 226 AFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR--PNLELLR-----------DSCEPF 272
           +F V+L EI                    E+P++   N ++L+           D+C   
Sbjct: 206 SFGVVLWEITSL----------------AEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER 249

Query: 273 VLACMRDCWAEAPESRPDFPTIRARLK 299
           V   MR CW   P+ RP F  I   LK
Sbjct: 250 VTDLMRMCWQFNPKMRPTFLEIVNLLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|219526 pfam07701, HNOBA, Heme NO binding associated

 Score = 49.5 bits (119), Expect = 5e-07
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 4/57 (7%)

Query: 316 MMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRL 372
           ++ +Q     ++ + +EK  + LE    +   E+ EEK+KT+DLL+ MLP  VA+RL
Sbjct: 157 LLGEQARAQLKLKKRLEKLKDKLE----EAHRELEEEKKKTDDLLYSMLPKSVANRL 209

The HNOBA domain is found associated with the HNOB domain and pfam00211 in soluble cyclases and signalling proteins. The HNOB domain is predicted to function as a heme-dependent sensor for gaseous ligands, and transduce diverse downstream signals, in both bacteria and animals. Length = 209

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 50.4 bits (120), Expect = 5e-07
 Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 18/158 (11%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L  S    H +L + NC+V    VL+++DFG+          S G  Q    + W 
Sbjct: 105 GMAYLE-SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI--PIKWT 161

Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGC---GLYEPKG-EDCEEPFRP 260
           APE L       R + ++DV+++ ++L E        G C   G+   +  E  E+ +R 
Sbjct: 162 APEALNYG----RYSSESDVWSYGILLWETFS----LGVCPYPGMTNQQAREQVEKGYRM 213

Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           +       C   V   M+ CW   PE+RP F  ++  L
Sbjct: 214 SCP---QKCPDDVYKVMQRCWDYKPENRPKFSELQKEL 248

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 50.8 bits (121), Expect = 5e-07
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)

Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
           ++ IA  P E +  +     D++  TY +        +GM +L  S    H +L + N +
Sbjct: 123 SYDIARVPDEQMTFK-----DLVSCTYQV-------ARGMEYL-ASQKCIHRDLAARNVL 169

Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
           VT   V+++ DFGL           +    YY+        + W APE L D       T
Sbjct: 170 VTENNVMKIADFGLAR--------DVNNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 217

Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
            ++DV++F V++ EI    G P+ G  + E      +G   ++P          +C   +
Sbjct: 218 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP---------ANCTNEL 268

Query: 274 LACMRDCWAEAPESRPDF 291
              MRDCW   P  RP F
Sbjct: 269 YMMMRDCWHAIPSHRPTF 286

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 50.0 bits (119), Expect = 6e-07
 Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 34/169 (20%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L  +    H +L + N ++ ++   +++DFGL +     EN       YY++    
Sbjct: 107 GMKYLEETNF-VHRDLAARNVLLVTQHYAKISDFGLSKALGADEN-------YYKAKTHG 158

Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKG 251
              + W APE +       + + K+DV++F V++ E     + P+ G    E       G
Sbjct: 159 KWPVKWYAPECMN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG 214

Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
           E  E P R         C P +   M+ CW    + RP F  +  RL++
Sbjct: 215 ERMECPQR---------CPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 49.9 bits (119), Expect = 7e-07
 Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 24/155 (15%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND---SIGEHQYYRS 200
           +GM +L  S    H +L + NC+V  +  ++V+DFGL   R+  +++   S+G     R 
Sbjct: 111 EGMAYLE-SKQFIHRDLAARNCLVDDQGCVKVSDFGLS--RYVLDDEYTSSVGSKFPVR- 166

Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEI--IGRRGPFGGCGLYE--PKGEDCEE 256
             W  PE+L  +    + + K+DV+AF V++ E+  +G+  P+      E   K      
Sbjct: 167 --WSPPEVLLYS----KFSSKSDVWAFGVLMWEVYSLGKM-PYERFNNSETVEKVSQGLR 219

Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF 291
            +RP+L   +      V A M  CW E  E RP F
Sbjct: 220 LYRPHLASEK------VYAIMYSCWHEKAEERPTF 248

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 50.4 bits (120), Expect = 7e-07
 Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 35/161 (21%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS--- 200
           +GM +L  S    H +L + N +VT   V+++ DFGL    H  +        YY+    
Sbjct: 145 RGMEYL-ASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNID--------YYKKTTN 195

Query: 201 ----LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PK 250
               + W APE L D       T ++DV++F V+L EI    G P+ G  + E      +
Sbjct: 196 GRLPVKWMAPEALFDRVY----THQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE 251

Query: 251 GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF 291
           G   ++P          +C   +   MR+CW   P  RP F
Sbjct: 252 GHRMDKP---------ANCTHELYMIMRECWHAVPSQRPTF 283

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 50.1 bits (120), Expect = 7e-07
 Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 21/161 (13%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            GM++LH+  +  H ++ + NCV+     +++TD  L       +   +G+++  R + W
Sbjct: 128 CGMSYLHKRGV-IHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNEN-RPVKW 185

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEP 257
            A E L +       +  +DV++F V+L E++     P+     +E       G    +P
Sbjct: 186 MALESLVNKEY----SSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQP 241

Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
                     +C   + A M  CWA  PE RP F  +   L
Sbjct: 242 I---------NCPDELFAVMACCWALDPEERPSFSQLVQCL 273

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 50.0 bits (120), Expect = 7e-07
 Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 39/172 (22%)

Query: 145 GMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLL 202
           GM +L  S +   H +L + N +V S  V +V+DFGL   R   ++++    +  +  + 
Sbjct: 118 GMKYL--SEMNYVHRDLAARNILVNSNLVCKVSDFGLS--RRLEDSEATYTTKGGKIPIR 173

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGC-----------GLYEP 249
           W APE +         T  +DV++F +++ E++  G R P+              G   P
Sbjct: 174 WTAPEAIAYRKF----TSASDVWSFGIVMWEVMSYGER-PYWDMSNQDVIKAVEDGYRLP 228

Query: 250 KGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
              DC        +L            M DCW +    RP F  I + L  M
Sbjct: 229 PPMDCPSALY---QL------------MLDCWQKDRNERPTFSQIVSTLDKM 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 49.9 bits (119), Expect = 8e-07
 Identities = 55/195 (28%), Positives = 81/195 (41%), Gaps = 36/195 (18%)

Query: 118 LKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTD 177
           L  RIG     + +  L+ F   I   GM +L       H +L + NC++     + V D
Sbjct: 99  LMSRIGEEPFTLPLQTLVRFMIDIAS-GMEYLSSKNF-IHRDLAARNCMLNENMTVCVAD 156

Query: 178 FGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKADVYAFAVI 230
           FGL +         I    YYR        + W A E L D       T  +DV+AF V 
Sbjct: 157 FGLSK--------KIYSGDYYRQGCASKLPVKWLALESLADNVY----TTHSDVWAFGVT 204

Query: 231 LHEIIGR-RGPFGG---CGLYE--PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA 284
           + EI+ R + P+ G     +Y    KG   ++P     + L D     V   M  CW+  
Sbjct: 205 MWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQP----PDCLED-----VYELMCQCWSPE 255

Query: 285 PESRPDFPTIRARLK 299
           P+ RP F  +R +L+
Sbjct: 256 PKCRPSFQHLRDQLE 270

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 50.0 bits (119), Expect = 9e-07
 Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 45/166 (27%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQ--YYRS- 200
           +GM +L  S    H +L + N +VT   V+++ DFGL            G H   YY+  
Sbjct: 145 RGMEYL-ESRRCIHRDLAARNVLVTEDNVMKIADFGLAR----------GVHDIDYYKKT 193

Query: 201 ------LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCGLYEPKGED 253
                 + W APE L D       T ++DV++F +++ EI    G P+ G          
Sbjct: 194 SNGRLPVKWMAPEALFDRVY----THQSDVWSFGILMWEIFTLGGSPYPGI--------- 240

Query: 254 CEEPFRPNLELLRD--------SCEPFVLACMRDCWAEAPESRPDF 291
              P     +LLR+        +C   +   MR+CW   P  RP F
Sbjct: 241 ---PVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTF 283

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 49.4 bits (118), Expect = 1e-06
 Identities = 48/166 (28%), Positives = 68/166 (40%), Gaps = 51/166 (30%)

Query: 157 HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAP 206
           H ++ + NC++T +    V ++ DFG+           I    YYR    ++L   W  P
Sbjct: 139 HRDIAARNCLLTCKGPGRVAKIADFGMAR--------DIYRASYYRKGGRAMLPIKWMPP 190

Query: 207 ELLRDTHAPIRG--TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLEL 264
           E      A + G  T K DV++F V+L EI       G    Y P       P R N E+
Sbjct: 191 E------AFLDGIFTSKTDVWSFGVLLWEIFS----LG----YMPY------PGRTNQEV 230

Query: 265 LR-----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           +              C   V   M DCW   PE RP+F TI  R++
Sbjct: 231 MEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 49.6 bits (119), Expect = 1e-06
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 13/104 (12%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY----YRS 200
           G+ ++H + +  H +LK SN +V     L++ DFG+        +    EH+Y    Y +
Sbjct: 119 GLKYIHSANV-IHRDLKPSNLLVNEDCELRIGDFGMAR---GLSSSPT-EHKYFMTEYVA 173

Query: 201 LLW-KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
             W +APELL         T   D+++   I  E++GRR  F G
Sbjct: 174 TRWYRAPELLLSLP---EYTTAIDMWSVGCIFAEMLGRRQLFPG 214

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 49.4 bits (118), Expect = 1e-06
 Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 22/151 (14%)

Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCA------ENDSIGEHQYYRSLLWKAPELLR 210
           H +L + NC+V    V+++ DFGL    + A      END+I        + W  PE + 
Sbjct: 153 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAI-------PIRWMPPESIF 205

Query: 211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRP-NLELLRDSC 269
                 R T ++DV+A+ V+L EI      +G    Y    E+     R  N+    D+C
Sbjct: 206 YN----RYTTESDVWAYGVVLWEIFS----YGMQPYYGMAHEEVIYYVRDGNVLSCPDNC 257

Query: 270 EPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
              +   MR CW++ P  RP F +I   L+ 
Sbjct: 258 PLELYNLMRLCWSKLPSDRPSFASINRILQR 288

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 17/180 (9%)

Query: 123 GIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHE 182
           G     + +  L++    I   GM ++ R     H +L+++N +V    V +V DFGL  
Sbjct: 93  GEMGKYLRLPQLVDMAAQIA-SGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLAR 150

Query: 183 LRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RG 239
           L    +N+          + W APE      A + G  T K+DV++F ++L E+  + R 
Sbjct: 151 L--IEDNEYTARQGAKFPIKWTAPE------AALYGRFTIKSDVWSFGILLTELTTKGRV 202

Query: 240 PFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           P+ G    E   +  E  +R         C   +   M  CW + PE RP F  ++A L+
Sbjct: 203 PYPGMVNREVL-DQVERGYRMPCP---PECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 258

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 34/162 (20%)

Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHE-LRHCAENDSIGEHQYYRS------ 200
           F+HR       +L + N ++ +R   +++DFG+   L   A +D      YYR+      
Sbjct: 116 FVHR-------DLAARNVLLVNRHQAKISDFGMSRALG--AGSD------YYRATTAGRW 160

Query: 201 -LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCGLYEPKGEDCEEPF 258
            L W APE +       + + K+DV+++ V L E       P+G       KG +     
Sbjct: 161 PLKWYAPECINYG----KFSSKSDVWSYGVTLWEAFSYGAKPYGEM-----KGAEVIAML 211

Query: 259 RPNLELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
                L R + C   + + M  CW   PE RP F  + +  +
Sbjct: 212 ESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFR 253

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 38/171 (22%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS--- 200
           +   F+HR       ++ + N +V+S   +++ DFGL           + +  YY++   
Sbjct: 124 ESKRFVHR-------DIAARNVLVSSPDCVKLGDFGLSRY--------LEDESYYKASKG 168

Query: 201 ---LLWKAPELL--RDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--E 252
              + W APE +  R      R T  +DV+ F V + EI+     PF G    +  G  E
Sbjct: 169 KLPIKWMAPESINFR------RFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE 222

Query: 253 DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
           + E    P       +C P + + M  CWA  P  RP F  ++A+L  +  
Sbjct: 223 NGERLPMP------PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 47.5 bits (113), Expect = 6e-06
 Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 23/162 (14%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG-EHQYYRSLL 202
            GM  L  +    H +L + NC+V+S+  ++V+   L         D    E+   R+ L
Sbjct: 128 LGMDHLSNARF-VHRDLAARNCLVSSQREVKVSLLSL-------SKDVYNSEYYKLRNAL 179

Query: 203 ----WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEP 257
               W APE +++       + K+DV++F V++ E+  +   PF G        E     
Sbjct: 180 IPLRWLAPEAVQEDDF----STKSDVWSFGVLMWEVFTQGELPFYGL----SDEEVLNRL 231

Query: 258 FRPNLEL-LRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
               LEL + + C   +   M  CWA  P+ RP F  + + L
Sbjct: 232 QAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSAL 273

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 47.5 bits (113), Expect = 6e-06
 Identities = 47/163 (28%), Positives = 69/163 (42%), Gaps = 24/163 (14%)

Query: 144 QGMTFL-HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-- 200
           +GM FL  R  I  H +L + N +++   V+++ DFGL         D   +  Y R   
Sbjct: 184 RGMEFLASRKCI--HRDLAARNILLSENNVVKICDFGL-------ARDIYKDPDYVRKGD 234

Query: 201 ----LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCGLYEPKGEDCE 255
               L W APE + D       T ++DV++F V+L EI      P+ G  + E   E C 
Sbjct: 235 ARLPLKWMAPESIFDKVY----TTQSDVWSFGVLLWEIFSLGASPYPGVQIDE---EFCR 287

Query: 256 EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
                      +   P + + M DCW   PE RP F  +   L
Sbjct: 288 RLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEIL 330

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 46.9 bits (111), Expect = 7e-06
 Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 36/179 (20%)

Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ F   I   GM +L       H +L + NC++     + V DFGL +         I 
Sbjct: 114 LVKFMTDIAS-GMEYLSSKSF-IHRDLAARNCMLNENMNVCVADFGLSK--------KIY 163

Query: 194 EHQYYRS-------LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCG 245
              YYR        + W A E L D       T K+DV++F V + EI  R + P+ G  
Sbjct: 164 NGDYYRQGRIAKMPVKWIAIESLADRVY----TTKSDVWSFGVTMWEIATRGQTPYPGVE 219

Query: 246 L-----YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
                 Y  +G   ++P           C   + + M  CW   P+ RP F T+R  L+
Sbjct: 220 NSEIYDYLRQGNRLKQP---------PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELE 269

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 47.1 bits (112), Expect = 7e-06
 Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 24/159 (15%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEHQYYRSLL 202
           +GM FL  S    H +L + N ++T   ++++ DFGL  ++ +  +++ + +      + 
Sbjct: 152 KGMAFL-ASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMN--DSNYVVKGNARLPVK 208

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGC----GLYEP--KGEDCE 255
           W APE + +       T ++DV+++ ++L EI      P+ G       Y+   +G    
Sbjct: 209 WMAPESIFNCVY----TFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMA 264

Query: 256 EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
           +P     E         +   M+ CW   P  RP F  I
Sbjct: 265 QPEHAPAE---------IYDIMKTCWDADPLKRPTFKQI 294

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 46.9 bits (111), Expect = 9e-06
 Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 24/166 (14%)

Query: 144 QGMTFL-HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-- 200
           +GM FL  R  I  H +L + N +++   V+++ DFGL         D   +  Y R   
Sbjct: 190 KGMEFLASRKCI--HRDLAARNILLSENNVVKICDFGL-------ARDIYKDPDYVRKGD 240

Query: 201 ----LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCE 255
               L W APE + D       T ++DV++F V+L EI      P+ G  + E      +
Sbjct: 241 ARLPLKWMAPETIFDRVY----TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 296

Query: 256 EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           E  R       D   P +   M DCW   P  RP F  +   L ++
Sbjct: 297 EGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 339

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 46.7 bits (111), Expect = 9e-06
 Identities = 65/272 (23%), Positives = 104/272 (38%), Gaps = 72/272 (26%)

Query: 50  VCMKGKGEVLTYWLVGATEGAVQGRERNQVSG----LP-IKNGDSHAGEIASMSLNLLDA 104
            CMK         L+G      +     ++      LP +K+GD H+  + S        
Sbjct: 53  ACMKDFDHPNVMKLIGV---CFEASSLQKIPKPMVILPFMKHGDLHSFLLYS-------- 101

Query: 105 VKNHKIAHRPQE-TLKLRIGIHSDIII-ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKS 162
               ++   P++  L+  +    DI + + YL N      R    F+HR       +L +
Sbjct: 102 ----RLGGLPEKLPLQTLLKFMVDIALGMEYLSN------RN---FIHR-------DLAA 141

Query: 163 SNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAP 215
            NC++     + V DFGL +         I    YYR        + W A E L D    
Sbjct: 142 RNCMLREDMTVCVADFGLSK--------KIYSGDYYRQGRIAKMPVKWIAIESLADRVY- 192

Query: 216 IRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPFRPNLELLRDSC 269
              T K+DV+AF V + EI  R + P+ G   +E       G   ++P         + C
Sbjct: 193 ---TSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQP---------EDC 240

Query: 270 EPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
              +   M  CW   P+ RP F  +R  L+++
Sbjct: 241 LDELYDLMYSCWRADPKDRPTFTKLREVLENI 272

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 12/98 (12%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEH---QYYRS 200
           +G+ +LH + I  H ++K  N +V S  VL++ DFGL  +    E+  + +    QYYR 
Sbjct: 114 RGLKYLHSAGI-LHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYR- 171

Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRR 238
               APE+L    +    T   D+++   I  E++GRR
Sbjct: 172 ----APEIL--MGSR-HYTSAVDIWSVGCIFAELLGRR 202

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 26/160 (16%)

Query: 144 QGMTFL-HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-- 200
           +GM FL  R  I  H +L + N +++   V+++ DFGL         D   +  Y R   
Sbjct: 185 RGMEFLASRKCI--HRDLAARNILLSENNVVKICDFGL-------ARDIYKDPDYVRKGS 235

Query: 201 ----LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCE 255
               L W APE + D       T ++DV++F V+L EI      P+ G  + E   E C+
Sbjct: 236 ARLPLKWMAPESIFDKVY----TTQSDVWSFGVLLWEIFSLGASPYPGVQINE---EFCQ 288

Query: 256 EPFRPNLEL-LRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
              +    +   ++  P +   M  CW   P+ RP F  +
Sbjct: 289 R-LKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSAL 327

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 30/164 (18%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS--- 200
           +G  F+HR       +L + N ++ ++   +++DFGL   +    +DS     YY++   
Sbjct: 112 EGKNFVHR-------DLAARNVLLVNQHYAKISDFGLS--KALGADDS-----YYKARSA 157

Query: 201 ----LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEE 256
               L W APE +       + + ++DV+++ + + E       +G     + KG +   
Sbjct: 158 GKWPLKWYAPECINFR----KFSSRSDVWSYGITMWEAFS----YGQKPYKKMKGPEVMS 209

Query: 257 PFRPNLEL-LRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
                  L     C P + A M+DCW    E RP+F  +  R++
Sbjct: 210 FIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMR 253

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 42/167 (25%)

Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-------SLLWKAPELL 209
           H +L + N +V S   +++ DFGL ++          + +YY+        + W APE L
Sbjct: 131 HRDLATRNILVESENRVKIGDFGLTKVLPQ-------DKEYYKVREPGESPIFWYAPESL 183

Query: 210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLY-EPKGE-----DCEEPFRPN-- 261
            ++    + +  +DV++F V+L+E+      F        P  E       ++  +    
Sbjct: 184 TES----KFSVASDVWSFGVVLYEL------FTYSDKSCSPPAEFMRMMGNDKQGQMIVY 233

Query: 262 --LELLR--------DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
             +ELL+          C   + A M++CW   P  RP F  +  ++
Sbjct: 234 HLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQV 280

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 25/184 (13%)

Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFG-LHE 182
           H   ++   LM    G+   GM +L  S +G  H  L +   +V S  V +++ F  L E
Sbjct: 100 HEGQLVAGQLMGMLPGLA-SGMKYL--SEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQE 156

Query: 183 LRHCAENDSIGEHQYYRSL-LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
            +  A   ++      +S  LW APE ++  H     +  +DV++F +++ E++     +
Sbjct: 157 DKSEAIYTTMSG----KSPVLWAAPEAIQYHHF----SSASDVWSFGIVMWEVMS----Y 204

Query: 242 GGCGLYEPKGEDC----EEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
           G    ++  G+D     E+ FR  L   R+ C   +   M DCW +    RP F  I + 
Sbjct: 205 GERPYWDMSGQDVIKAVEDGFR--LPAPRN-CPNLLHQLMLDCWQKERGERPRFSQIHSI 261

Query: 298 LKHM 301
           L  M
Sbjct: 262 LSKM 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 36/168 (21%)

Query: 146 MTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL---- 201
           M ++HR       +L + N +V S  V +V+DFGL   R   ++ S  +  Y  SL    
Sbjct: 125 MNYVHR-------DLAARNILVNSNLVCKVSDFGLS--RFLEDDTS--DPTYTSSLGGKI 173

Query: 202 --LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC----E 255
              W APE +    A  + T  +DV+++ +++ E++     +G    ++   +D     E
Sbjct: 174 PIRWTAPEAI----AYRKFTSASDVWSYGIVMWEVMS----YGERPYWDMSNQDVINAIE 225

Query: 256 EPFR--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           + +R  P ++     C   +   M DCW +   +RP F  I + L  M
Sbjct: 226 QDYRLPPPMD-----CPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 44.5 bits (106), Expect = 4e-05
 Identities = 24/99 (24%), Positives = 51/99 (51%), Gaps = 11/99 (11%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE-NDSIGEHQYYRSLL 202
           +G+ +LH + I  H ++K++N ++TS   +++ DFGL      A+ +D+   +    +  
Sbjct: 109 KGLEYLHSNGI-IHRDIKAANILLTSDGEVKLIDFGL-----SAQLSDTKARNTMVGTPY 162

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
           W APE++           KAD+++  +   E+   + P+
Sbjct: 163 WMAPEVINGKPY----DYKADIWSLGITAIELAEGKPPY 197

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 44.3 bits (104), Expect = 5e-05
 Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 34/206 (16%)

Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I    L+N+   I + GM +L    +  H +L + N +V S   +++TDFGL  L 
Sbjct: 102 HKDNIGSQLLLNWCVQIAK-GMMYLEERRL-VHRDLAARNVLVKSPNHVKITDFGLARLL 159

Query: 185 HCAENDSIGEHQYYRS------LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRR 238
                   G+ + Y +      + W A E +       + T ++DV+++ V + E++   
Sbjct: 160 E-------GDEKEYNADGGKMPIKWMALECIHYR----KFTHQSDVWSYGVTIWELMTFG 208

Query: 239 G-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP 292
           G P+ G    E      KGE   +P           C   V   M  CW    +SRP F 
Sbjct: 209 GKPYDGIPTREIPDLLEKGERLPQP---------PICTIDVYMVMVKCWMIDADSRPKFK 259

Query: 293 TIRARLKHMKDGKQKNIIDQMMEMME 318
            + A    M    Q+ ++ Q  + M+
Sbjct: 260 ELAAEFSRMARDPQRYLVIQGDDRMK 285

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|201086 pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain

 Score = 43.0 bits (102), Expect = 8e-05
 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 79  VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
            SGLP +   +HA  +A M+L++L+A+K+  I       L++R+GIH+
Sbjct: 64  ASGLP-EPSPAHAQTLAEMALDMLEAIKSVNIHSFEG--LRVRVGIHT 108

Length = 184

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 18/106 (16%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEH-------QY 197
           G+ +LH + +  H +LK SN +V S   L++ DFGL   R    ++            ++
Sbjct: 115 GLKYLHSANV-IHRDLKPSNILVNSNCDLKICDFGLA--RGVDPDEDEKGFLTEYVVTRW 171

Query: 198 YRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
           YR     APELL  +    R T+  D+++   I  E++ R+  F G
Sbjct: 172 YR-----APELLLSSS---RYTKAIDIWSVGCIFAELLTRKPLFPG 209

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143636 cd07302, CHD, cyclase homology domain

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 79  VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
           V GLP  + D HA      +L + +A+            L+LRIGIH+
Sbjct: 57  VFGLPGAHED-HAERAVRAALEMQEALAELNAEREGGPPLRLRIGIHT 103

Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide. Length = 177

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 36/201 (17%)

Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           + D I    L+N+   I + GM++L    +  H +L + N +V S   +++TDFGL  L 
Sbjct: 102 NKDRIGSQDLLNWCVQIAK-GMSYLEEVRL-VHRDLAARNVLVKSPNHVKITDFGLARLL 159

Query: 185 HCAENDSIGEHQYYRS-----LLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--G 236
                  I E +Y+       + W A E +L       R T ++DV+++ V + E++  G
Sbjct: 160 ------DIDETEYHADGGKVPIKWMALESILHR-----RFTHQSDVWSYGVTVWELMTFG 208

Query: 237 RRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF 291
            + P+ G    E      KGE   +P  P        C   V   M  CW    E RP F
Sbjct: 209 AK-PYDGIPAREIPDLLEKGERLPQP--PI-------CTIDVYMIMVKCWMIDSECRPRF 258

Query: 292 PTIRARLKHMKDGKQKNIIDQ 312
             +      M     + ++ Q
Sbjct: 259 RELVDEFSRMARDPSRFVVIQ 279

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 27/106 (25%), Positives = 56/106 (52%), Gaps = 12/106 (11%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---- 199
           +G+ +LH   I  H ++K +N +V ++  ++++DFG+   +    N    +    R    
Sbjct: 117 KGLNYLHNRGI-IHRDIKGANILVDNKGGIKISDFGIS--KKLEANSLSTKTNGARPSLQ 173

Query: 200 -SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGC 244
            S+ W APE+++ T      T+KAD+++   ++ E++  + PF  C
Sbjct: 174 GSVFWMAPEVVKQTSY----TRKADIWSLGCLVVEMLTGKHPFPDC 215

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 42.7 bits (100), Expect = 2e-04
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)

Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 102 HKDNIGSQYLLNWCVQIAK-GMNYLEERRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 159

Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 160 GADEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 212

Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   M  CW    +SRP F  +  
Sbjct: 213 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 263

Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 264 EFSKMARDPQRYLVIQGDERM 284

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 5/93 (5%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           G+ +LH++    H +L   NC +T+   +++ D+GL   ++  E+  I +  +   L W 
Sbjct: 112 GLLWLHQADF-IHSDLALRNCQLTADLSVKIGDYGLALEQY-PEDYYITKDCHAVPLRWL 169

Query: 205 APELLRDTHA---PIRGTQKADVYAFAVILHEI 234
           APEL+        P   T+K+++++  V + E+
Sbjct: 170 APELVEIRGQDLLPKDQTKKSNIWSLGVTMWEL 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 28/167 (16%)

Query: 145 GMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS--- 200
           GM +L  S +G  H +L + N +V S  V +V+DFGL  +    E+D   E  Y      
Sbjct: 118 GMKYL--SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRV---LEDDP--EAAYTTRGGK 170

Query: 201 --LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC---- 254
             + W APE +    A  + T  +DV+++ +++ E++     +G    +E   +D     
Sbjct: 171 IPIRWTAPEAI----AYRKFTSASDVWSYGIVMWEVMS----YGERPYWEMSNQDVIKAI 222

Query: 255 EEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           EE +R    +    C   +   M DCW +    RP F  I + L  +
Sbjct: 223 EEGYRLPAPM---DCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 25/164 (15%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +G+ +LH + I  H ++K +N +V S  V+++ DFG  +     E    G      +  W
Sbjct: 112 EGLAYLHSNGI-VHRDIKGANILVDSDGVVKLADFGCAKRLGDIET-GEGTGSVRGTPYW 169

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG-----LYEPK-GEDCEEP 257
            APE++R         + AD+++    + E+   + P+   G     LY  K G   E P
Sbjct: 170 MAPEVIRGE----EYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALY--KIGSSGEPP 223

Query: 258 FRPNLELLRDSCEPFVLACM-RDCWAEAPESRPDFPTIRARLKH 300
             P  E L +  + F+  C+ RD     P+ R   PT    L+H
Sbjct: 224 EIP--EHLSEEAKDFLRKCLRRD-----PKKR---PTADELLQH 257

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 42.3 bits (99), Expect = 3e-04
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 13/160 (8%)

Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSI 192
           L++F   + R GM FL  S    H +L + N ++    ++++ DFGL  ++ H  +++ +
Sbjct: 239 LLSFTYQVAR-GMEFL-ASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMH--DSNYV 294

Query: 193 GEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCGLYEPKG 251
            +   +  + W APE + D       T  +DV+++ ++L EI    G P+ G  +     
Sbjct: 295 SKGSTFLPVKWMAPESIFDNLY----TTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFY 350

Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF 291
              +  +R       D     V   M  CW   PE RP F
Sbjct: 351 NKIKSGYRMAKP---DHATQEVYDIMVKCWNSEPEKRPSF 387

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 25/107 (23%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL--- 201
           G+ FLH   I  H +LK  N +VTS   +++ DFGL  +           + +  +L   
Sbjct: 119 GVDFLHSHRI-VHRDLKPQNILVTSDGQVKIADFGLARI-----------YSFEMALTSV 166

Query: 202 ---LW-KAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
              LW +APE LL+ ++A        D+++   I  E+  RR  F G
Sbjct: 167 VVTLWYRAPEVLLQSSYAT-----PVDMWSVGCIFAELFRRRPLFRG 208

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 41.9 bits (98), Expect = 3e-04
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 20/156 (12%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           G+ FLH + I  H +LK  N +VTS   +++ DFGL  +  C     +       +L ++
Sbjct: 120 GLDFLHANCI-VHRDLKPENILVTSGGQVKLADFGLARIYSC----QMALTPVVVTLWYR 174

Query: 205 APE-LLRDTHA-PIRGTQKADVYAFAVILHEIIGRRGPFGG-------CGLYEPKGEDCE 255
           APE LL+ T+A P+      D+++   I  E+  R+  F G         +++  G   E
Sbjct: 175 APEVLLQSTYATPV------DMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 228

Query: 256 EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF 291
           + +  ++ L R +  P     ++    E  ES    
Sbjct: 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQL 264

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 41.8 bits (98), Expect = 4e-04
 Identities = 24/93 (25%), Positives = 51/93 (54%), Gaps = 5/93 (5%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           G+  LH++    H +L   NC++T+   +++ D+GL   ++  E+  +   Q +  L W 
Sbjct: 112 GLLHLHKNNF-IHSDLALRNCLLTADLTVKIGDYGLSHNKY-KEDYYVTPDQLWVPLRWI 169

Query: 205 APELLRDTHAP---IRGTQKADVYAFAVILHEI 234
           APEL+ + H     +  T++++V++  V + E+
Sbjct: 170 APELVDEVHGNLLVVDQTKESNVWSLGVTIWEL 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|143637 cd07556, Nucleotidyl_cyc_III, Class III nucleotidyl cyclases

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIH 27
            P+Y ++G  VN ASRMES  +  ++ 
Sbjct: 107 RPQYDVWGALVNLASRMESQAKAGQVL 133

Class III nucleotidyl cyclases are the largest, most diverse group of nucleotidyl cyclases (NC's) containing prokaryotic and eukaryotic proteins. They can be divided into two major groups; the mononucleotidyl cyclases (MNC's) and the diguanylate cyclases (DGC's). The MNC's, which include the adenylate cyclases (AC's) and the guanylate cyclases (GC's), have a conserved cyclase homology domain (CHD), while the DGC's have a conserved GGDEF domain, named after a conserved motif within this subgroup. Their products, cyclic guanylyl and adenylyl nucleotides, are second messengers that play important roles in eukaryotic signal transduction and prokaryotic sensory pathways. Length = 133

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 26/155 (16%)

Query: 146 MTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS----- 200
           M ++HR       +L + N +V S    +V+DFGL  +    E+D   E  Y  S     
Sbjct: 126 MNYVHR-------DLAARNILVNSNLECKVSDFGLSRV---LEDDP--EGTYTTSGGKIP 173

Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRP 260
           + W APE +    A  + T  +DV++F +++ E++     FG    ++    +  +    
Sbjct: 174 IRWTAPEAI----AYRKFTSASDVWSFGIVMWEVMS----FGERPYWDMSNHEVMKAIND 225

Query: 261 NLELLRD-SCEPFVLACMRDCWAEAPESRPDFPTI 294
              L     C   V   M  CW +    RP F  I
Sbjct: 226 GFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDI 260

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 41.2 bits (96), Expect = 5e-04
 Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 11/158 (6%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L       H +L + NC+V    ++++ DFG+    +  +   +G H     + W 
Sbjct: 132 GMVYLASQHF-VHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML-PIRWM 189

Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLEL 264
            PE +       + T ++DV++  V+L EI      +G    Y+    +  E       L
Sbjct: 190 PPESIMYR----KFTTESDVWSLGVVLWEIF----TYGKQPWYQLSNNEVIECITQGRVL 241

Query: 265 LRD-SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            R  +C   V   M  CW   P  R +   I + L+++
Sbjct: 242 QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 41.3 bits (95), Expect = 6e-04
 Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 6/104 (5%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTS-RWVLQVTDFGL-HELRHCAENDSIGEHQ--YYR 199
             + +LH   I  H ++K  N ++     V+++ DFGL   L       SI         
Sbjct: 112 SALEYLHSKGI-IHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVG 170

Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
           +  + APE+L         +  +D+++  + L+E++    PF G
Sbjct: 171 TPGYMAPEVLLGLSLA-YASSSSDIWSLGITLYELLTGLPPFEG 213

Length = 384

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 40.7 bits (95), Expect = 9e-04
 Identities = 56/204 (27%), Positives = 85/204 (41%), Gaps = 39/204 (19%)

Query: 112 HRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS 169
           H PQE         +D++ I+Y  L+     I   GM +L  S    H +L + NC+V  
Sbjct: 113 HEPQEA-----AEKADVVTISYSTLIFMATQIA-SGMKYL-SSLNFVHRDLATRNCLVGK 165

Query: 170 RWVLQVTDFGLHELRHCAENDSIGEHQYYR-------SLLWKAPE--LLRDTHAPIRGTQ 220
            + +++ DFG+   R+    D      YYR        + W + E  LL       + T 
Sbjct: 166 NYTIKIADFGMS--RNLYSGD------YYRIQGRAVLPIRWMSWESILLG------KFTT 211

Query: 221 KADVYAFAVILHEIIG--RRGPFGGCGLYEPKGEDCEEPFRP---NLELLRDSCEP-FVL 274
            +DV+AF V L EI+   +  P+      E   E+  E FR     + L + +  P  + 
Sbjct: 212 ASDVWAFGVTLWEILTLCKEQPYSQLS-DEQVIENTGEFFRDQGRQVYLPKPALCPDSLY 270

Query: 275 ACMRDCWAEAPESRPDFPTIRARL 298
             M  CW    + RP F  I A L
Sbjct: 271 KLMLSCWRRNAKERPSFQEIHATL 294

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 40.6 bits (96), Expect = 9e-04
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 24/106 (22%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQ----YYR 199
           +G+ +LH + I  H +LK +N ++ S  VL++ DFGL   R     +    HQ    +YR
Sbjct: 113 RGLEYLHSNWI-LHRDLKPNNLLIASDGVLKLADFGL--ARSFGSPNRKMTHQVVTRWYR 169

Query: 200 SLLWKAPELLRDTHAPIRGTQK----ADVYAFAVILHEIIGRRGPF 241
                APELL        G +      D+++   I  E++ R  PF
Sbjct: 170 -----APELL-------FGARHYGVGVDMWSVGCIFAELLLRV-PF 202

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 20/121 (16%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN--DSIGEHQYYRSLL 202
           G+ FLH   I  + +LK  N ++ S   +++ DFG+     C EN  D +    +  +  
Sbjct: 113 GLFFLHSKGI-IYRDLKLDNVMLDSEGHIKIADFGM-----CKENMWDGVTTKTFCGTPD 166

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
           + APE++   + P    +  D +AF V+L+E++  + PF        +GED +E F+  +
Sbjct: 167 YIAPEIIA--YQPY--GKSVDWWAFGVLLYEMLAGQAPF--------EGEDEDELFQSIM 214

Query: 263 E 263
           E
Sbjct: 215 E 215

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|225025 COG2114, CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms]

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 5/76 (6%)

Query: 3   RYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGG--YIVEERGVVCMKGKGEVLT 60
            Y + G  VN A+R+ES  +P ++ +S   +A  D +     +    G   +KG    + 
Sbjct: 153 GYTVVGSAVNQAARLESLAKPGQVLLS---EATYDLVRDLVDLFSGLGSHRLKGLARPVR 209

Query: 61  YWLVGATEGAVQGRER 76
            + +           R
Sbjct: 210 VYQLCHRSLRRNLELR 225

Length = 227

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEH---QYYRSL 201
           G+ ++H + +  H +LK  N +V +   L++ DFGL   R  +EN         +Y  + 
Sbjct: 117 GLKYIHSANV-LHRDLKPGNLLVNADCELKICDFGLA--RGFSENPGENAGFMTEYVATR 173

Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
            ++APE++         T+  DV++   IL E++GR+  F G
Sbjct: 174 WYRAPEIMLSFQ---SYTKAIDVWSVGCILAELLGRKPVFKG 212

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 20/121 (16%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN--DSIGEHQYYRSLL 202
           G+ FLHR  I  + +LK  N ++ S   +++ DFG+     C E+  D +    +  +  
Sbjct: 113 GLFFLHRRGI-IYRDLKLDNVMLDSEGHIKIADFGM-----CKEHMVDGVTTRTFCGTPD 166

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
           + APE++   + P    +  D +A+ V+L+E++  + PF         GED +E F+  +
Sbjct: 167 YIAPEII--AYQPY--GKSVDWWAYGVLLYEMLAGQPPF--------DGEDEDELFQSIM 214

Query: 263 E 263
           E
Sbjct: 215 E 215

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 14/151 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEHQYYRSLL 202
            GM FL  S    H +L + N ++    ++++ DFGL  ++    +++ I +   +  L 
Sbjct: 250 NGMEFL-ASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMR--DSNYISKGSTFLPLK 306

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE-PKGEDCEEPFRPN 261
           W APE + +       T  +DV++F ++L EI       GG    E P  E      +  
Sbjct: 307 WMAPESIFNNLY----TTLSDVWSFGILLWEIF----TLGGTPYPELPMNEQFYNAIKRG 358

Query: 262 LELLRDS-CEPFVLACMRDCWAEAPESRPDF 291
             + + +     +   M+ CW E  E RPDF
Sbjct: 359 YRMAKPAHASDEIYEIMQKCWEEKFEIRPDF 389

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 40.2 bits (95), Expect = 0.001
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 24/99 (24%)

Query: 144 QGMTFLHRSPIGCHG----NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR 199
           QG+  +H+     HG    +LK  N +V+   V+++ DFGL   R         +   Y 
Sbjct: 110 QGLAHIHK-----HGFFHRDLKPENLLVSGPEVVKIADFGL--AREIRSRPPYTD---YV 159

Query: 200 SLLW-KAPE-LLRDTH--APIRGTQKADVYAFAVILHEI 234
           S  W +APE LLR T   +P+      D++A   I+ E+
Sbjct: 160 STRWYRAPEILLRSTSYSSPV------DIWALGCIMAEL 192

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW- 203
           G+ ++HR+ I  H ++K++N ++T   +L++ DFGL      ++N     +      LW 
Sbjct: 131 GLYYIHRNKI-LHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWY 189

Query: 204 KAPELL---RDTHAPI 216
           + PELL   RD   PI
Sbjct: 190 RPPELLLGERDYGPPI 205

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 41/166 (24%)

Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS----LLW 203
           +LH+     H +L  +N ++     + +TDFGL + +               S    +L+
Sbjct: 128 YLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQK--------QPESKLTSVVGTILY 179

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGC-----------GLYEPKGE 252
             PE++++   P    +KADV+AF  IL+++   + PF               +YEP  E
Sbjct: 180 SCPEIVKNE--PY--GEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPE 235

Query: 253 DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
                     E + D         +  C     E+RPD   + A +
Sbjct: 236 GMYS------EDVTDV--------ITSCLTPDAEARPDIIQVSAMI 267

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 16/149 (10%)

Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H ++K +N  +T+  V+++ D GL        + +   H    +  + +PE + +     
Sbjct: 129 HRDIKPANVFITATGVVKLGDLGLGRF---FSSKTTAAHSLVGTPYYMSPERIHENGYNF 185

Query: 217 RGTQKADVYAFAVILHEIIGRRGPFGG--CGLYE--PKGEDCEEPFRPNLELLRDSCEPF 272
               K+D+++   +L+E+   + PF G    LY    K E C+ P  P+     D     
Sbjct: 186 ----KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPS-----DHYSEE 236

Query: 273 VLACMRDCWAEAPESRPDFPTIRARLKHM 301
           +   +  C    PE RPD   +    K M
Sbjct: 237 LRQLVNMCINPDPEKRPDITYVYDVAKRM 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 39/208 (18%)

Query: 100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGN 159
           +LLD V+ H+ +  PQ                  L+N+   I + GM +L    +  H N
Sbjct: 94  SLLDHVRQHRDSLDPQR-----------------LLNWCVQIAK-GMYYLEEHRM-VHRN 134

Query: 160 LKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGT 219
           L + N ++ S  ++Q+ DFG+ +L +  ++      ++   + W A E +       R T
Sbjct: 135 LAARNILLKSDSIVQIADFGVADLLY-PDDKKYFYSEHKTPIKWMALESILFG----RYT 189

Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
            ++DV+++ V + E++     P+ G   +E      KGE   +P           C   V
Sbjct: 190 HQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQP---------QICTIDV 240

Query: 274 LACMRDCWAEAPESRPDFPTIRARLKHM 301
              M  CW      RP F  +      M
Sbjct: 241 YMVMVKCWMIDENVRPTFKELANEFTRM 268

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 17/105 (16%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
           QG+ F H   I  H +LK  N ++ +  VL++ DFGL          S    + Y     
Sbjct: 109 QGLAFCHSHGI-LHRDLKPENLLINTEGVLKLADFGL-----ARSFGS--PVRPYTHYVV 160

Query: 201 LLW-KAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
             W +APE LL D       +   D+++   I  E++ RR  F G
Sbjct: 161 TRWYRAPELLLGDKGY----STPVDIWSVGCIFAELLSRRPLFPG 201

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 17/104 (16%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL--L 202
           G+ +LH + I  H +LK SN ++T +  L++ DFGL      A    +        +  L
Sbjct: 120 GLQYLHENFI-IHRDLKVSNLLLTDKGCLKIADFGL------ARTYGLPAKPMTPKVVTL 172

Query: 203 W-KAPELL--RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
           W +APELL    T+     T   D++A   IL E++  +    G
Sbjct: 173 WYRAPELLLGCTTY-----TTAIDMWAVGCILAELLAHKPLLPG 211

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 31/169 (18%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----- 199
           GM +L  S    H +L + NC+V     +++ DFG+      + N   G+  YYR     
Sbjct: 150 GMKYL-SSLNFVHRDLATRNCLVGENLTIKIADFGM------SRNLYAGD--YYRIQGRA 200

Query: 200 --SLLWKAPELLRDTHAPIRG--TQKADVYAFAVILHEIIG--RRGPFGGCGLYEPKGED 253
              + W A E +      + G  T  +DV+AF V L EI+   +  P+G     E   E+
Sbjct: 201 VLPIRWMAWECI------LMGKFTTASDVWAFGVTLWEILMLCKEQPYGELT-DEQVIEN 253

Query: 254 CEEPFRPN---LELLRDS-CEPFVLACMRDCWAEAPESRPDFPTIRARL 298
             E FR     + L R   C   +   M  CW+     RP F  I A L
Sbjct: 254 AGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFL 302

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|143636 cd07302, CHD, cyclase homology domain

 Score = 37.9 bits (89), Expect = 0.003
 Identities = 13/22 (59%), Positives = 16/22 (72%)

Query: 386 VTIYFSDIVGFTAMSAESTPLE 407
           VT+ F+DIVGFTA+S    P E
Sbjct: 2   VTVLFADIVGFTALSERLGPEE 23

Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide. Length = 177

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 39.5 bits (92), Expect = 0.003
 Identities = 25/92 (27%), Positives = 53/92 (57%), Gaps = 5/92 (5%)

Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H ++KS+N ++ S  ++++ DFG  ++     +D +G   +  +  + APE+ R    P 
Sbjct: 166 HRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGR-TFCGTPYYVAPEIWR--RKPY 222

Query: 217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
             ++KAD+++  V+L+E++  + PF G  + E
Sbjct: 223 --SKKADMFSLGVLLYELLTLKRPFDGENMEE 252

Length = 496

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 39.0 bits (91), Expect = 0.003
 Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 22/165 (13%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE---NDSIGEHQYYRS 200
           +G+ +LH   I  H +LK+ N +V +  + +++DFG+   +   +   ND     Q   S
Sbjct: 119 EGLAYLHSKGI-LHRDLKADNLLVDADGICKISDFGIS--KKSDDIYDNDQNMSMQ--GS 173

Query: 201 LLWKAPELLRDTHAPIRG-TQKADVYAFAVILHEIIGRRGPFGG----CGLYEPKGEDCE 255
           + W APE++       +G + K D+++   ++ E+   R P+        +++   +   
Sbjct: 174 VFWMAPEVIHSYS---QGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSA 230

Query: 256 EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
            P  P++ +      P  L  +  C+   P++R   PT R  L+H
Sbjct: 231 PPIPPDVSMN---LSPVALDFLNACFTINPDNR---PTARELLQH 269

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 38.8 bits (90), Expect = 0.004
 Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 11/158 (6%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L       H +L + NC+V +  ++++ DFG+    +  +   +G H     + W 
Sbjct: 135 GMVYLASQHF-VHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML-PIRWM 192

Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLEL 264
            PE +       + T ++DV++F VIL EI      +G    ++    +  E       L
Sbjct: 193 PPESIMYR----KFTTESDVWSFGVILWEIF----TYGKQPWFQLSNTEVIECITQGRVL 244

Query: 265 LRDS-CEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            R   C   V   M  CW   P+ R +   I   L  +
Sbjct: 245 ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL 282

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	413
KOG1023|consensus	484		100.0
KOG0192|consensus	362		100.0
KOG0197|consensus	468		100.0
KOG0591|consensus	375		100.0
KOG0581|consensus	364		100.0
KOG0615|consensus	475		100.0
KOG4721|consensus	904		100.0
KOG0193|consensus	678		99.98
KOG0575|consensus	592		99.97
KOG0598|consensus	357		99.97
KOG0592|consensus	604		99.97
KOG0582|consensus	516		99.97
KOG0198|consensus	313		99.97
KOG0661|consensus	538		99.97
KOG0201|consensus	467		99.97
KOG0578|consensus	550		99.97
KOG0588|consensus	786		99.97
PTZ00283	496	serine/threonine protein kinase; Provisional	99.96
KOG1026|consensus	774		99.96
KOG0593|consensus	396		99.96
KOG0983|consensus	391		99.96
KOG0660|consensus	359		99.96
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.96
PHA02988	283	hypothetical protein; Provisional	99.96
KOG0595|consensus	429		99.96
KOG0583|consensus	370		99.96
KOG1095|consensus	1025		99.96
KOG0599|consensus	411		99.96
KOG0585|consensus	576		99.96
KOG0033|consensus	355		99.96
KOG0605|consensus	550		99.96
KOG0596|consensus	677		99.96
KOG0600|consensus	560		99.95
KOG0616|consensus	355		99.95
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.95
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.95
KOG0694|consensus	694		99.95
KOG0659|consensus	318		99.95
KOG0196|consensus	996		99.95
KOG0658|consensus	364		99.95
KOG0594|consensus	323		99.95
KOG0597|consensus	808		99.95
PHA02882	294	putative serine/threonine kinase; Provisional	99.95
KOG1187|consensus	361		99.95
KOG4257|consensus	974		99.95
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.95
KOG4278|consensus	1157		99.95
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.95
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.95
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.95
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.95
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.95
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.95
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.95
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.95
KOG4279|consensus	1226		99.95
KOG0604|consensus	400		99.95
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.94
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.94
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.94
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.94
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.94
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.94
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.94
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.94
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.94
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.94
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.94
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.94
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.94
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.94
KOG0199|consensus	1039		99.94
KOG0194|consensus	474		99.94
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.94
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.94
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.94
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.94
PTZ00036	440	glycogen synthase kinase; Provisional	99.94
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.94
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.94
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.94
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.94
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.94
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.94
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.94
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.94
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.94
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.94
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.94
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.94
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.94
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.94
PHA03212	391	serine/threonine kinase US3; Provisional	99.94
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.94
KOG4645|consensus	1509		99.94
PTZ00267	478	NIMA-related protein kinase; Provisional	99.94
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.94
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.94
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.94
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.94
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.94
KOG0589|consensus	426		99.94
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.94
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.94
KOG4717|consensus	864		99.94
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.94
KOG2345|consensus	302		99.94
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.94
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.94
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.94
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.94
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.94
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.94
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.94
PHA03207	392	serine/threonine kinase US3; Provisional	99.94
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.94
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.94
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.94
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.94
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.94
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.94
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.93
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.93
KOG0663|consensus	419		99.93
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.93
KOG1006|consensus	361		99.93
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.93
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.93
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.93
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.93
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.93
KOG0577|consensus	948		99.93
KOG1989|consensus	738		99.93
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.93
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.93
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.93
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.93
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.93
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.93
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.93
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.93
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.93
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.93
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.93
KOG0200|consensus	609		99.93
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.93
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.93
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.93
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.93
KOG0667|consensus	586		99.93
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.93
KOG0690|consensus	516		99.93
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.93
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.93
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.93
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.93
KOG0579|consensus	1187		99.93
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.93
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.93
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.93
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.93
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.93
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.93
KOG0584|consensus	632		99.93
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.93
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.93
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.93
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.93
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.93
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.93
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.93
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.93
KOG0603|consensus	612		99.93
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.93
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.93
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.93
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.93
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.93
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.93
PTZ00284	467	protein kinase; Provisional	99.93
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.93
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.93
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.93
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.93
KOG0611|consensus	668		99.93
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.93
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.93
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.93
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.93
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.93
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.93
KOG3653|consensus	534		99.93
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.93
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.93
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.93
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.93
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.93
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.93
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.93
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.93
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.93
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.93
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.93
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.93
KOG0614|consensus	732		99.93
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.93
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.93
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.93
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.92
PHA03211	461	serine/threonine kinase US3; Provisional	99.92
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.92
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.92
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.92
KOG0580|consensus	281		99.92
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.92
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.92
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.92
PHA03210	501	serine/threonine kinase US3; Provisional	99.92
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.92
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.92
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.92
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.92
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.92
KOG1035|consensus	1351		99.92
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.92
PHA03209	357	serine/threonine kinase US3; Provisional	99.92
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.92
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.92
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.92
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.92
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.92
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.92
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.92
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.92
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.92
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.92
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.92
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.92
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.92
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.92
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.92
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.92
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.92
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.92
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.92
KOG2052|consensus	513		99.92
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.92
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.92
KOG0032|consensus	382		99.92
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.92
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.92
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.92
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.92
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.92
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.92
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.92
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.92
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.92
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.92
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.92
KOG0610|consensus	459		99.92
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.92
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.92
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.92
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.92
KOG0986|consensus	591		99.92
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.92
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.92
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.92
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.92
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.92
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.92
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.92
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.92
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.92
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.92
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.92
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.92
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.92
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.92
KOG0574|consensus	502		99.92
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.92
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.92
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.92
PLN00181	793	protein SPA1-RELATED; Provisional	99.92
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.91
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.91
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.91
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.91
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.91
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.91
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.91
KOG0612|consensus	1317		99.91
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.91
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.91
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.91
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.91
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.91
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.91
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.91
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.91
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.91
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.91
KOG1024|consensus	563		99.91
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.91
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.91
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.91
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.91
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.91
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.91
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.91
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.91
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.91
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.91
KOG1094|consensus	807		99.91
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.91
KOG0666|consensus	438		99.91
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.91
KOG1027|consensus	903		99.91
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.91
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.91
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.91
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.91
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.91
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.91
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.91
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.91
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.91
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.91
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.91
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.91
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.91
KOG0669|consensus	376		99.9
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.9
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.9
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.9
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.9
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.9
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.9
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.9
KOG1025|consensus	1177		99.9
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.9
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.9
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.9
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.9
KOG0984|consensus	282		99.9
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.9
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.9
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.9
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.9
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.9
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.9
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.9
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.9
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.9
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.9
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.9
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.9
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.9
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.9
KOG0586|consensus	596		99.9
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.9
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.9
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.9
KOG0696|consensus	683		99.9
PLN00009	294	cyclin-dependent kinase A; Provisional	99.9
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.9
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.9
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.9
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.89
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.89
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.89
KOG0671|consensus	415		99.89
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.89
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.89
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.89
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.89
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.88
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.88
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.88
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.88
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.88
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.88
KOG0664|consensus	449		99.87
KOG4236|consensus	888		99.87
KOG0665|consensus	369		99.87
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.86
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.86
KOG0587|consensus	953		99.86
KOG4250|consensus	732		99.86
KOG0662|consensus	292		99.85
KOG0608|consensus	1034		99.85
KOG0695|consensus	593		99.85
KOG1151|consensus	775		99.85
KOG0607|consensus	463		99.85
KOG0670|consensus	752		99.83
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.83
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.83
KOG0668|consensus	338		99.8
KOG1345|consensus	378		99.76
KOG4171|consensus	671		99.75
KOG0576|consensus	829		99.75
KOG0590|consensus	601		99.74
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.74
KOG1167|consensus	418		99.72
KOG1152|consensus	772		99.71
KOG0195|consensus	448		99.71
KOG1290|consensus	590		99.7
KOG4158|consensus	598		99.69
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.67
KOG0606|consensus	1205		99.67
KOG1164|consensus	322		99.65
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.62
KOG1163|consensus	341		99.62
KOG3619|consensus	867		99.6
KOG1033|consensus	516		99.59
KOG1165|consensus	449		99.59
KOG1240|consensus	1431		99.57
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.55
KOG1023|consensus	484		99.55
KOG0603|consensus	612		99.55
KOG4171|consensus	671		99.51
KOG3618|consensus	1318		99.44
KOG0590|consensus	601		99.34
PRK09188	365	serine/threonine protein kinase; Provisional	99.22
PRK12274	218	serine/threonine protein kinase; Provisional	99.2
KOG2137|consensus	700		99.1
PF00211	184	Guanylate_cyc: Adenylate and Guanylate cyclase cat	99.07
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.02
COG4248	637	Uncharacterized protein with protein kinase and he	98.94
KOG1166|consensus	974		98.93
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.85
KOG0606|consensus	1205		98.85
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.83
KOG0601|consensus	524		98.77
KOG1266|consensus	458		98.72
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.6
smart00090	237	RIO RIO-like kinase.	98.53
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.53
KOG0601|consensus	524		98.49
PRK10345	210	hypothetical protein; Provisional	98.45
COG2114	227	CyaA Adenylate cyclase, family 3 (some proteins co	98.4
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.39
PRK14879	211	serine/threonine protein kinase; Provisional	98.34
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.34
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.25
KOG1243|consensus	690		98.24
cd07302	177	CHD cyclase homology domain. Catalytic domains of	98.22
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.86
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.85
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.83
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.78
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.6
KOG3618|consensus	1318		97.45
smart00044	194	CYCc Adenylyl- / guanylyl cyclase, catalytic domai	97.4
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.4
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.35
KOG3087|consensus	229		97.26
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.16
PF07701	219	HNOBA: Heme NO binding associated; InterPro: IPR01	97.06
KOG3741|consensus	655		97.05
KOG3619|consensus	867		96.96
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	96.77
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	96.59
PRK09902	216	hypothetical protein; Provisional	96.39
KOG0576|consensus	829		95.9
KOG1035|consensus	1351		95.22
COG0478	304	RIO-like serine/threonine protein kinase fused to	94.64
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	94.29
KOG1826|consensus	2724		94.1
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	93.57
PRK05231	319	homoserine kinase; Provisional	93.19
PRK10271	188	thiK thiamine kinase; Provisional	93.03
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	92.85
PF01636	239	APH: Phosphotransferase enzyme family This family	92.65
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	92.14
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	92.13
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	92.08
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	91.98
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	91.59
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	91.5
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	90.87
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	90.59
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	90.48
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	90.23
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	89.75
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	89.21
COG0661	517	AarF Predicted unusual protein kinase [General fun	89.07
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	88.93
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	88.46
COG2334	331	Putative homoserine kinase type II (protein kinase	88.37
PHA03111	444	Ser/Thr kinase; Provisional	87.95
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	87.85
PLN02236	344	choline kinase	87.64
COG2114	227	CyaA Adenylate cyclase, family 3 (some proteins co	87.42
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	85.91
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	84.36
KOG1093|consensus	725		83.08
PRK06148	1013	hypothetical protein; Provisional	82.93
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	80.83

>KOG1023|consensus

Probab=100.00  E-value=3.7e-44  Score=340.20  Aligned_cols=271  Identities=46%  Similarity=0.783  Sum_probs=226.6

Q ss_pred             ccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcc
Q psy16840        122 IGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL  201 (413)
Q Consensus       122 ~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~  201 (413)
                      ..+.+|+.|+.++++  ||+  .||+|||+..+..|+.|++.|+++|..|.+||+|||+....... .............
T Consensus        41 ~~~~~d~~F~~s~~r--di~--~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~-~~~~~~~~~~~~~  115 (484)
T KOG1023|consen   41 EDIKLDYFFILSFIR--DIS--KGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEET-AEPEAHHPIRKAL  115 (484)
T ss_pred             cccCccHHHHHHHHH--HHH--HHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhccccccc-ccccccchhHHHH
Confidence            467899999999999  999  99999999888799999999999999999999999997765321 1111112223456


Q ss_pred             cccCcccccCCCCCCC---CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-------CCCCCCCCCCcccccCCChH
Q psy16840        202 LWKAPELLRDTHAPIR---GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-------EDCEEPFRPNLELLRDSCEP  271 (413)
Q Consensus       202 ~y~aPE~~~~~~~~~~---~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~  271 (413)
                      .|.|||.+++......   .+.++||||||++++|+++.+.||..........       .......+|.+.... ..++
T Consensus       116 lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~-e~~~  194 (484)
T KOG1023|consen  116 LWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLN-ELPP  194 (484)
T ss_pred             hccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhh-hcch
Confidence            7999999988643222   4888999999999999999999998754333211       113445666665433 5677


Q ss_pred             HHHHHHHHHhccCCCCCCChhHHHHHHHhhcccCcccHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q psy16840        272 FVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYE  351 (413)
Q Consensus       272 ~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~le~~~~e~~~~l~~  351 (413)
                      ++..++.+||..+|..||+++++...++.+......            ..+.+|++++++++|+++||+.+++|+.++.+
T Consensus       195 ~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~~~------------~~nl~D~m~~~le~Y~~nLe~~v~eRt~~l~~  262 (484)
T KOG1023|consen  195 ELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGGSS------------KGNLMDSLFRMLESYADNLEKLVDERTAELEE  262 (484)
T ss_pred             HHHHHHHHhcccChhhCccHHHHHhhhhhhcccccc------------cchhHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            899999999999999999999999999888776421            12349999999999999999999999999999


Q ss_pred             HHHhHHHHHHhcCCHHHHHHHhcCCCCCCCccCeEEEEeccccccccccCCCCCCcccC
Q psy16840        352 EKRKTEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLERPV  410 (413)
Q Consensus       352 e~~~~~~ll~~~lp~~va~~lk~g~~v~~e~~~~vti~fsdi~gft~~~~~~~p~~~~~  410 (413)
                      |+++++.||.++||++||++++.|+.|+|+.|++||++||||||||.+|++++|+|||.
T Consensus       263 e~~k~d~LL~~mLP~~VA~~lk~G~~v~pe~~~~vti~fsDiv~fT~l~~~~~P~~vv~  321 (484)
T KOG1023|consen  263 EKKKTDTLLGQMLPKSVAESLKLGKTVDPESFDSVTIYFSDIVGFTVLSSNSTPIQVVT  321 (484)
T ss_pred             HHHHHHHHHHHhcCHHHhhHhhcCCcCCccccCceeeeeHHHHHHHHHHhcCCCceeee
Confidence            99999999999999999999999999999999999999999999999999999999875

>KOG0192|consensus

Probab=100.00  E-value=1.7e-35  Score=276.79  Aligned_cols=178  Identities=30%  Similarity=0.524  Sum_probs=145.2

Q ss_pred             hhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCC-CcccCCCCCCCeEEcCCe-EEEEec
Q psy16840        100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSP-IGCHGNLKSSNCVVTSRW-VLQVTD  177 (413)
Q Consensus       100 ~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~-iiiHrdlkp~Nill~~~~-~~kl~D  177 (413)
                      +|.+++...   ....+++..++.+++|++              +||.|||+++ | |||||||+|||++.++ ++||+|
T Consensus       126 sL~~~l~~~---~~~~l~~~~~l~~aldiA--------------rGm~YLH~~~~i-IHrDLK~~NiLv~~~~~~~KI~D  187 (362)
T KOG0192|consen  126 SLSVLLHKK---RKRKLPLKVRLRIALDIA--------------RGMEYLHSEGPI-IHRDLKSDNILVDLKGKTLKIAD  187 (362)
T ss_pred             cHHHHHhhc---ccCCCCHHHHHHHHHHHH--------------HHHHHHhcCCCe-eecccChhhEEEcCCCCEEEECC
Confidence            666666554   345677888888888777              9999999999 7 9999999999999998 999999


Q ss_pred             cccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCC
Q psy16840        178 FGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEP  257 (413)
Q Consensus       178 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  257 (413)
                      ||+++......   .......||+.|||||++++.  ...|+.|+||||||+++|||+||+.||.+..............
T Consensus       188 FGlsr~~~~~~---~~~~~~~GT~~wMAPEv~~~~--~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~  262 (362)
T KOG0192|consen  188 FGLSREKVISK---TSMTSVAGTYRWMAPEVLRGE--KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGG  262 (362)
T ss_pred             Cccceeecccc---ccccCCCCCccccChhhhcCC--CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcC
Confidence            99998765332   122336799999999999954  1233999999999999999999999999877544444555566


Q ss_pred             CCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       258 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      .+|.++   ..+++.+..+|..||..||..||++.+++..|+.+..
T Consensus       263 ~Rp~~p---~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  263 LRPPIP---KECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             CCCCCC---ccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence            666654   4599999999999999999999999999999987754

>KOG0197|consensus

Probab=100.00  E-value=6e-35  Score=272.65  Aligned_cols=177  Identities=29%  Similarity=0.471  Sum_probs=138.7

Q ss_pred             hhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccc
Q psy16840        100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFG  179 (413)
Q Consensus       100 ~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg  179 (413)
                      +|++||+..   .+..+...+-++++.|++              +||+||+++++ |||||..+||||+++..+||+|||
T Consensus       287 sLl~yLr~~---~~~~l~~~~Ll~~a~qIa--------------eGM~YLes~~~-IHRDLAARNiLV~~~~~vKIsDFG  348 (468)
T KOG0197|consen  287 SLLDYLRTR---EGGLLNLPQLLDFAAQIA--------------EGMAYLESKNY-IHRDLAARNILVDEDLVVKISDFG  348 (468)
T ss_pred             cHHHHhhhc---CCCccchHHHHHHHHHHH--------------HHHHHHHhCCc-cchhhhhhheeeccCceEEEcccc
Confidence            889999872   233445555555555444              99999999999 999999999999999999999999


Q ss_pred             cccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCC
Q psy16840        180 LHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPF  258 (413)
Q Consensus       180 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~  258 (413)
                      +|+....+......  ...-...|.|||++....+    +.+||||||||+|||++| |+.||.+.+..+.... ...+.
T Consensus       349 LAr~~~d~~Y~~~~--~~kfPIkWtAPEa~~~~~F----S~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~-le~Gy  421 (468)
T KOG0197|consen  349 LARLIGDDEYTASE--GGKFPIKWTAPEALNYGKF----SSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLEL-LERGY  421 (468)
T ss_pred             cccccCCCceeecC--CCCCCceecCHHHHhhCCc----ccccceeehhhhHHHHhccCCCCCCCCCHHHHHHH-HhccC
Confidence            99965443332221  2223578999999999988    999999999999999998 8999988765444332 33344


Q ss_pred             CCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhccc
Q psy16840        259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~~  304 (413)
                      |.+.+   +.||+++.++|..||..+|++||||+.+...|..+...
T Consensus       422 Rlp~P---~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  422 RLPRP---EGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             cCCCC---CCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence            44332   68999999999999999999999999998888877543

>KOG0591|consensus

Probab=100.00  E-value=3.5e-34  Score=246.20  Aligned_cols=150  Identities=20%  Similarity=0.305  Sum_probs=123.4

Q ss_pred             CCchHHhhHhhhc---CCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCC
Q psy16840        139 DGIPRQGMTFLHR---SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAP  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~---~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  215 (413)
                      |++  .||..+|+   +|.|+||||||.||+++.+|.+||+|||+++.+..   ......+.+|||.||+||.+.+.++ 
T Consensus       132 QL~--~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s---~~tfA~S~VGTPyYMSPE~i~~~~Y-  205 (375)
T KOG0591|consen  132 QLC--RALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSS---KTTFAHSLVGTPYYMSPERIHESGY-  205 (375)
T ss_pred             HHH--HHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcc---hhHHHHhhcCCCcccCHHHHhcCCC-
Confidence            777  99999997   45569999999999999999999999999998753   3334567899999999999999988 


Q ss_pred             CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        216 IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                         +.+|||||+||++|||+.-++||.+.+..+....+......| ++.  ..++.++..||..|+..||+.||+...++
T Consensus       206 ---~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~-~p~--~~YS~~l~~li~~ci~vd~~~RP~t~~~v  279 (375)
T KOG0591|consen  206 ---NFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPP-LPD--EHYSTDLRELINMCIAVDPEQRPDTVPYV  279 (375)
T ss_pred             ---CcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCC-CcH--HHhhhHHHHHHHHHccCCcccCCCcchHH
Confidence               999999999999999999999999986554444444443322 221  56889999999999999999999966665


Q ss_pred             HHHHh
Q psy16840        296 ARLKH  300 (413)
Q Consensus       296 ~~l~~  300 (413)
                      ..+..
T Consensus       280 ~di~~  284 (375)
T KOG0591|consen  280 QDIQS  284 (375)
T ss_pred             HHHHH
Confidence            55544

>KOG0581|consensus

Probab=100.00  E-value=3e-34  Score=256.56  Aligned_cols=145  Identities=19%  Similarity=0.322  Sum_probs=118.8

Q ss_pred             CCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      +++  +||.|||+ ++| |||||||+|||+++.|.+||||||.++.+.+.     ...+.+||..|||||.+.+..|   
T Consensus       186 ~VL--~GL~YLh~~~~I-IHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-----~a~tfvGT~~YMsPERi~g~~Y---  254 (364)
T KOG0581|consen  186 AVL--RGLSYLHEERKI-IHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-----IANTFVGTSAYMSPERISGESY---  254 (364)
T ss_pred             HHH--HHHHHHhhccCe-eeccCCHHHeeeccCCCEEeccccccHHhhhh-----hcccccccccccChhhhcCCcC---
Confidence            777  99999995 888 99999999999999999999999999876543     3467789999999999999988   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCC--CCC---CCCCCCCCCCCCcccccC-CChHHHHHHHHHHhccCCCCCCCh
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGL--YEP---KGEDCEEPFRPNLELLRD-SCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~---~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                       +.++||||||+.++|+++|+.||.....  ...   ...++. ...|.   +|. .+++++++++..||.+||.+|||+
T Consensus       255 -s~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~-~ppP~---lP~~~fS~ef~~FV~~CL~Kdp~~R~s~  329 (364)
T KOG0581|consen  255 -SVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD-EPPPR---LPEGEFSPEFRSFVSCCLRKDPSERPSA  329 (364)
T ss_pred             -CcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc-CCCCC---CCcccCCHHHHHHHHHHhcCCcccCCCH
Confidence             9999999999999999999999976411  111   111221 12222   234 499999999999999999999999


Q ss_pred             hHHHHHHH
Q psy16840        292 PTIRARLK  299 (413)
Q Consensus       292 ~~i~~~l~  299 (413)
                      .+++++-.
T Consensus       330 ~qLl~Hpf  337 (364)
T KOG0581|consen  330 KQLLQHPF  337 (364)
T ss_pred             HHHhcCHH
Confidence            99987654

>KOG0615|consensus

Probab=100.00  E-value=4.8e-34  Score=257.31  Aligned_cols=153  Identities=19%  Similarity=0.222  Sum_probs=121.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCC---eEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAP  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  215 (413)
                      |++  .|+.|||++|| +||||||+|||+..+   ..+||+|||+|+....    .....+.|||+.|.|||++.+....
T Consensus       284 Qll--~avkYLH~~GI-~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~----~sfm~TlCGTpsYvAPEVl~~kg~~  356 (475)
T KOG0615|consen  284 QLL--TAVKYLHSQGI-IHRDIKPENILLSNDAEDCLLKITDFGLAKVSGE----GSFMKTLCGTPSYVAPEVLASKGVE  356 (475)
T ss_pred             HHH--HHHHHHHHcCc-ccccCCcceEEeccCCcceEEEecccchhhcccc----ceehhhhcCCccccChhheecCCee
Confidence            777  99999999999 999999999999866   8999999999998652    2234678999999999999887652


Q ss_pred             CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC-CCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHH
Q psy16840        216 IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE-PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI  294 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i  294 (413)
                       .+..++|+||+||+||-+++|.+||.+..... ..+.+....+ +-.+.....++++..+||.+||..||++|||+.++
T Consensus       357 -~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y-~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~ea  434 (475)
T KOG0615|consen  357 -YYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRY-AFGPLQWDRISEEALDLINWMLVVDPENRPSADEA  434 (475)
T ss_pred             -cccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcc-cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHH
Confidence             22468999999999999999999998755333 2222222222 22222336789999999999999999999999999


Q ss_pred             HHHHHh
Q psy16840        295 RARLKH  300 (413)
Q Consensus       295 ~~~l~~  300 (413)
                      +++.+-
T Consensus       435 L~hpW~  440 (475)
T KOG0615|consen  435 LNHPWF  440 (475)
T ss_pred             hcChhh
Confidence            987653

>KOG4721|consensus

Probab=100.00  E-value=3.1e-33  Score=260.73  Aligned_cols=149  Identities=23%  Similarity=0.442  Sum_probs=125.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      +|+  .||.|||.+.| ||||||+-||||+.+-.+||+|||.++.....    ....+++||..|||||++++.+.    
T Consensus       220 ~IA--~GM~YLH~hKI-IHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~----STkMSFaGTVaWMAPEvIrnePc----  288 (904)
T KOG4721|consen  220 GIA--GGMNYLHLHKI-IHRDLKSPNILISYDDVVKISDFGTSKELSDK----STKMSFAGTVAWMAPEVIRNEPC----  288 (904)
T ss_pred             Hhh--hhhHHHHHhhH-hhhccCCCceEeeccceEEeccccchHhhhhh----hhhhhhhhhHhhhCHHHhhcCCc----
Confidence            566  99999999999 99999999999999999999999998876432    22456789999999999999998    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      +.|+||||||||||||+||..||.+.................+   .|..||+-++-||++||+-.|.+||+|.+|+.+|
T Consensus       289 sEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~Lp---vPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl  365 (904)
T KOG4721|consen  289 SEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLP---VPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL  365 (904)
T ss_pred             ccccceehhHHHHHHHHhcCCCccccchheeEEeccCCccccc---CcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence            9999999999999999999999987554444433333333333   3478999999999999999999999999999988


Q ss_pred             Hhh
Q psy16840        299 KHM  301 (413)
Q Consensus       299 ~~~  301 (413)
                      ...
T Consensus       366 dIa  368 (904)
T KOG4721|consen  366 DIA  368 (904)
T ss_pred             hhc
Confidence            754

>KOG0193|consensus

Probab=99.98  E-value=8.2e-33  Score=260.31  Aligned_cols=160  Identities=28%  Similarity=0.425  Sum_probs=132.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  +||.|||.++| ||||||+.|||+.+++.|||+|||++...... ..........|...|||||+++... ...|
T Consensus       496 Qia--qGM~YLHAK~I-IHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w-~g~~q~~qp~gsilwmAPEvIRmqd-~nPf  570 (678)
T KOG0193|consen  496 QIA--QGMDYLHAKNI-IHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW-SGEQQLEQPHGSLLWMAPEVIRMQD-DNPF  570 (678)
T ss_pred             HHH--Hhhhhhhhhhh-hhhhccccceEEccCCcEEEecccceeeeeee-ccccccCCCccchhhhcHHHHhhcc-cCCC
Confidence            666  99999999999 99999999999999999999999998754322 2223344556789999999998554 2456


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ++.+||||||+++|||++|..||...........+......|.......+|+.++++|+..||..++++||.|.+|+..|
T Consensus       571 S~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l  650 (678)
T KOG0193|consen  571 SFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKL  650 (678)
T ss_pred             CcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHH
Confidence            99999999999999999999999955544444555556566777667788999999999999999999999999999988


Q ss_pred             Hhhcc
Q psy16840        299 KHMKD  303 (413)
Q Consensus       299 ~~~~~  303 (413)
                      ..+..
T Consensus       651 ~~l~~  655 (678)
T KOG0193|consen  651 EELLP  655 (678)
T ss_pred             HHhhh
Confidence            77765

>KOG0575|consensus

Probab=99.97  E-value=3.8e-33  Score=263.51  Aligned_cols=149  Identities=17%  Similarity=0.311  Sum_probs=125.0

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ..+++  ||+  .||.|||+++| ||||||..|+|++++.++||+|||+|..+..+.   ....+.||||.|.|||++..
T Consensus       121 ry~l~--QIv--~GlkYLH~~~I-iHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~---Erk~TlCGTPNYIAPEVl~k  192 (592)
T KOG0575|consen  121 RYFLR--QIV--EGLKYLHSLGI-IHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG---ERKKTLCGTPNYIAPEVLNK  192 (592)
T ss_pred             HHHHH--HHH--HHHHHHHhcCc-eecccchhheeecCcCcEEecccceeeeecCcc---cccceecCCCcccChhHhcc
Confidence            34555  888  99999999998 999999999999999999999999998775332   23467899999999999998


Q ss_pred             CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        212 THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       212 ~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      ..+    +..+||||+||++|.|+.|++||...+..+....+.....     .+|..++.++.+||.++|+.||.+|||+
T Consensus       193 ~gH----sfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y-----~~P~~ls~~A~dLI~~lL~~~P~~Rpsl  263 (592)
T KOG0575|consen  193 SGH----SFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEY-----SMPSHLSAEAKDLIRKLLRPNPSERPSL  263 (592)
T ss_pred             CCC----CCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCc-----ccccccCHHHHHHHHHHhcCCcccCCCH
Confidence            887    9999999999999999999999987654444433322222     2345788999999999999999999999


Q ss_pred             hHHHHH
Q psy16840        292 PTIRAR  297 (413)
Q Consensus       292 ~~i~~~  297 (413)
                      ++|+.+
T Consensus       264 ~~vL~h  269 (592)
T KOG0575|consen  264 DEVLDH  269 (592)
T ss_pred             HHHhcC
Confidence            999864

>KOG0598|consensus

Probab=99.97  E-value=2.3e-33  Score=250.86  Aligned_cols=140  Identities=16%  Similarity=0.238  Sum_probs=116.1

Q ss_pred             ccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCC
Q psy16840        137 FGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI  216 (413)
Q Consensus       137 ~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  216 (413)
                      +|+|+  .||.|||++|| |||||||+|||+|.+|+++|+|||+++.....   ...+.+.+||+.|||||++.+..+  
T Consensus       131 laEi~--lAL~~LH~~gI-iyRDlKPENILLd~~GHi~LtDFgL~k~~~~~---~~~t~tfcGT~eYmAPEil~~~gy--  202 (357)
T KOG0598|consen  131 LAEIV--LALGYLHSKGI-IYRDLKPENILLDEQGHIKLTDFGLCKEDLKD---GDATRTFCGTPEYMAPEILLGKGY--  202 (357)
T ss_pred             HHHHH--HHHHHHHhCCe-eeccCCHHHeeecCCCcEEEeccccchhcccC---CCccccccCCccccChHHHhcCCC--
Confidence            34788  99999999999 99999999999999999999999999864322   223456899999999999999988  


Q ss_pred             CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       217 ~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                        +..+|.||+|+++|||++|.+||.+.+.......+.....    ...+...+++.++++.++|..||++|..
T Consensus       203 --~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~----~~~p~~ls~~ardll~~LL~rdp~~RLg  270 (357)
T KOG0598|consen  203 --DKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL----PLPPGYLSEEARDLLKKLLKRDPRQRLG  270 (357)
T ss_pred             --CcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC----CCCCccCCHHHHHHHHHHhccCHHHhcC
Confidence              9999999999999999999999998765554444443331    1122458899999999999999999963

>KOG0592|consensus

Probab=99.97  E-value=1.3e-32  Score=256.04  Aligned_cols=148  Identities=20%  Similarity=0.324  Sum_probs=125.1

Q ss_pred             cCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC----------CcccccccCcccccCcc
Q psy16840        138 GDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND----------SIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       138 ~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~~~~gt~~y~aPE  207 (413)
                      ++|+  .||+|||++|| |||||||+|||+|+++++||+|||.|+.+......          .....+.+||..|.+||
T Consensus       181 AeIl--dAleylH~~GI-IHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPE  257 (604)
T KOG0592|consen  181 AEIL--DALEYLHSNGI-IHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPE  257 (604)
T ss_pred             HHHH--HHHHHHHhcCc-eeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHH
Confidence            4888  99999999999 99999999999999999999999999987654322          11125689999999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      ++.....    +..+|+|+||||+|+|+.|.+||.+.+.....+.+....+     .+++++++.+.+|+.+.|..||.+
T Consensus       258 lL~~~~~----~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y-----~fp~~fp~~a~dLv~KLLv~dp~~  328 (604)
T KOG0592|consen  258 LLNDSPA----GPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDY-----EFPEGFPEDARDLIKKLLVRDPSD  328 (604)
T ss_pred             HhcCCCC----CcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcc-----cCCCCCCHHHHHHHHHHHccCccc
Confidence            9999988    9999999999999999999999998775555544443332     244678899999999999999999


Q ss_pred             CCChhHHHHH
Q psy16840        288 RPDFPTIRAR  297 (413)
Q Consensus       288 Rps~~~i~~~  297 (413)
                      |++..+|.++
T Consensus       329 Rlt~~qIk~H  338 (604)
T KOG0592|consen  329 RLTSQQIKAH  338 (604)
T ss_pred             cccHHHHhhC
Confidence            9999999764

>KOG0582|consensus

Probab=99.97  E-value=1.7e-31  Score=243.06  Aligned_cols=165  Identities=16%  Similarity=0.250  Sum_probs=125.4

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCccc-ccccCccccc
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGE-HQYYRSLLWK  204 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~-~~~~gt~~y~  204 (413)
                      ++...+..+++  +++  +||.|||++|. ||||||+.||||+++|.|||+|||.+-.+.......... ....||+.||
T Consensus       123 l~E~~Ia~iLr--e~L--kaL~YLH~~G~-IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wm  197 (516)
T KOG0582|consen  123 LEEASIATILR--EVL--KALDYLHQNGH-IHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWM  197 (516)
T ss_pred             ccHHHHHHHHH--HHH--HHHHHHHhcCc-eecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCccccc
Confidence            34455666777  888  99999999999 999999999999999999999999876654433222222 5678999999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCC-CCcc----cccCCChHHHHHHHHH
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR-PNLE----LLRDSCEPFVLACMRD  279 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~l~~li~~  279 (413)
                      |||++.....  .|+.|+||||||++..|+.+|..||.................. +...    .-....+..++.++..
T Consensus       198 APEvl~q~~~--GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~  275 (516)
T KOG0582|consen  198 APEVLMQQLH--GYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIAL  275 (516)
T ss_pred             ChHHhhhccc--CccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHH
Confidence            9999765443  4599999999999999999999999886644433222222111 1110    1113467789999999


Q ss_pred             HhccCCCCCCChhHHHHH
Q psy16840        280 CWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       280 cl~~~P~~Rps~~~i~~~  297 (413)
                      ||..||.+|||+++++..
T Consensus       276 CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  276 CLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             HhhcCcccCCCHHHHhcc
Confidence            999999999999999864

>KOG0198|consensus

Probab=99.97  E-value=2.4e-32  Score=248.12  Aligned_cols=164  Identities=19%  Similarity=0.288  Sum_probs=125.7

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC-CeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      ....+..+.+  ||+  +||+|||++|+ |||||||+|||++. ++.+||+|||+++................||+.|||
T Consensus       115 ~E~~v~~ytr--~iL--~GL~ylHs~g~-vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~ma  189 (313)
T KOG0198|consen  115 PEPLVRRYTR--QIL--EGLAYLHSKGI-VHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMA  189 (313)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCE-eccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccC
Confidence            3334445555  888  99999999999 99999999999999 799999999998876542222233446789999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCC-CCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGC-GLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++.+....   ..++|||||||++.||+||..||... ........+.....   .+.++..++++.++++.+|+..|
T Consensus       190 PEvi~~g~~~---~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~---~P~ip~~ls~~a~~Fl~~C~~~~  263 (313)
T KOG0198|consen  190 PEVIRNGEVA---RRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDS---LPEIPDSLSDEAKDFLRKCFKRD  263 (313)
T ss_pred             chhhcCCCcC---CccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCC---CCCCCcccCHHHHHHHHHHhhcC
Confidence            9999863221   45999999999999999999999873 21222222222222   23456789999999999999999


Q ss_pred             CCCCCChhHHHHHHHhh
Q psy16840        285 PESRPDFPTIRARLKHM  301 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~  301 (413)
                      |++|||+.+++.+....
T Consensus       264 p~~Rpta~eLL~hpf~~  280 (313)
T KOG0198|consen  264 PEKRPTAEELLEHPFLK  280 (313)
T ss_pred             cccCcCHHHHhhChhhh
Confidence            99999999999876543

>KOG0661|consensus

Probab=99.97  E-value=2.2e-31  Score=244.15  Aligned_cols=179  Identities=22%  Similarity=0.289  Sum_probs=138.0

Q ss_pred             hhhhhhhhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEE
Q psy16840         94 IASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVL  173 (413)
Q Consensus        94 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~  173 (413)
                      ++.|+.||++.++.....    ++          ..-+..+|.  ||+  +||+|+|++|+ .||||||+|||+..+..+
T Consensus        89 fE~Md~NLYqLmK~R~r~----fs----------e~~irnim~--Qil--qGL~hiHk~Gf-FHRDlKPENiLi~~~~~i  149 (538)
T KOG0661|consen   89 FEFMDCNLYQLMKDRNRL----FS----------ESDIRNIMY--QIL--QGLAHIHKHGF-FHRDLKPENILISGNDVI  149 (538)
T ss_pred             HHhhhhhHHHHHhhcCCc----CC----------HHHHHHHHH--HHH--HHHHHHHhcCc-ccccCChhheEeccccee
Confidence            788999999888876321    22          223445555  888  99999999999 999999999999988899


Q ss_pred             EEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q psy16840        174 QVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED  253 (413)
Q Consensus       174 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~  253 (413)
                      ||+|||+|+......    ..+.++.|.+|.|||++....+   |+.+.||||+|||++|+.+-++-|.|.+..+....+
T Consensus       150 KiaDFGLARev~Skp----PYTeYVSTRWYRAPEvLLrs~~---Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KI  222 (538)
T KOG0661|consen  150 KIADFGLAREVRSKP----PYTEYVSTRWYRAPEVLLRSGY---YSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKI  222 (538)
T ss_pred             EecccccccccccCC----CcchhhhcccccchHHhhhccc---cCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHH
Confidence            999999999764332    2456788999999999877654   399999999999999999999999987644433322


Q ss_pred             CCCCCCC-------------------------CcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        254 CEEPFRP-------------------------NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       254 ~~~~~~~-------------------------~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      +.....|                         .+..+-+.+++++.++|.+|++.||.+|||+.+++++.
T Consensus       223 c~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p  292 (538)
T KOG0661|consen  223 CEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP  292 (538)
T ss_pred             HHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence            1111111                         11222345889999999999999999999999998763

>KOG0201|consensus

Probab=99.97  E-value=1.4e-30  Score=236.93  Aligned_cols=145  Identities=18%  Similarity=0.325  Sum_probs=122.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      +++  .||.|||.++. +|||||+.|||+..+|.+||+|||.+-......   ....+.+||+.|||||++.+..|    
T Consensus       119 e~l--~~l~ylH~~~k-iHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~---~rr~tfvGTPfwMAPEVI~~~~Y----  188 (467)
T KOG0201|consen  119 EVL--KGLDYLHSEKK-IHRDIKAANILLSESGDVKLADFGVAGQLTNTV---KRRKTFVGTPFWMAPEVIKQSGY----  188 (467)
T ss_pred             HHH--HHhhhhhhcce-ecccccccceeEeccCcEEEEecceeeeeechh---hccccccccccccchhhhccccc----
Confidence            777  99999999999 999999999999999999999999987764332   22367899999999999997777    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||++.+||++|.+|+...........+.. ...|.+   ...+++.++++|..||++||+.||++.+++.+
T Consensus       189 ~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk-~~PP~L---~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  189 DTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPK-SAPPRL---DGDFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             cchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccC-CCCCcc---ccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            9999999999999999999999988765443333322 223333   35889999999999999999999999999865

>KOG0578|consensus

Probab=99.97  E-value=3e-31  Score=248.72  Aligned_cols=197  Identities=18%  Similarity=0.242  Sum_probs=147.2

Q ss_pred             CCCCchhhhhhhh----hhhHhhhhhhhcc--------CCccchhh-cccccCChhhHhhhccccCCchHHhhHhhhcCC
Q psy16840         87 GDSHAGEIASMSL----NLLDAVKNHKIAH--------RPQETLKL-RIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSP  153 (413)
Q Consensus        87 ~~~~~~~~~~~~~----~l~~~l~~~~~~~--------~~~~~~~~-~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~  153 (413)
                      .+...+|..+|..    ++..|+..+....        ....++.. .....++..-+..+++  +++  +||+|||.+|
T Consensus       314 keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~~~~E~qIA~Icr--e~l--~aL~fLH~~g  389 (550)
T KOG0578|consen  314 KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKTRMTEGQIAAICR--EIL--QGLKFLHARG  389 (550)
T ss_pred             hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcccccHHHHHHHHH--HHH--HHHHHHHhcc
Confidence            3444456666654    5666666665431        00111111 1123355556677777  888  9999999999


Q ss_pred             CcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHH
Q psy16840        154 IGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHE  233 (413)
Q Consensus       154 iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~e  233 (413)
                      | +|||||.+|||++.+|.+||+|||++..+.....   ...+.+||+.|||||+.....|    ++++||||||++++|
T Consensus       390 I-iHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~---KR~TmVGTPYWMAPEVvtrk~Y----G~KVDIWSLGIMaIE  461 (550)
T KOG0578|consen  390 I-IHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS---KRSTMVGTPYWMAPEVVTRKPY----GPKVDIWSLGIMAIE  461 (550)
T ss_pred             e-eeeccccceeEeccCCcEEEeeeeeeeccccccC---ccccccCCCCccchhhhhhccc----CccccchhhhhHHHH
Confidence            9 9999999999999999999999999887654332   3567799999999999999988    999999999999999


Q ss_pred             HHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        234 IIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       234 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      |+-|++||...+.......+...+ .|.+. .+..+++.+++++.+||..|+++||++.+++++
T Consensus       462 MveGEPPYlnE~PlrAlyLIa~ng-~P~lk-~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  462 MVEGEPPYLNENPLRALYLIATNG-TPKLK-NPEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             HhcCCCCccCCChHHHHHHHhhcC-CCCcC-CccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            999999998655443333333222 33332 246789999999999999999999999999875

>KOG0588|consensus

Probab=99.97  E-value=4.9e-31  Score=250.50  Aligned_cols=147  Identities=19%  Similarity=0.254  Sum_probs=126.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .|+.|||..+| +||||||+|+|+|..+.+||+|||+|..-.+    .....+.||.++|.|||++.+.+|.   
T Consensus       120 QIi--~gv~yCH~~~i-cHRDLKpENlLLd~~~nIKIADFGMAsLe~~----gklLeTSCGSPHYA~PEIV~G~pYd---  189 (786)
T KOG0588|consen  120 QIL--DGVSYCHAFNI-CHRDLKPENLLLDVKNNIKIADFGMASLEVP----GKLLETSCGSPHYAAPEIVSGRPYD---  189 (786)
T ss_pred             HHH--HHHHHHhhhcc-eeccCCchhhhhhcccCEeeeccceeecccC----CccccccCCCcccCCchhhcCCCCC---
Confidence            888  99999999999 9999999999999999999999999976432    2234567999999999999999985   


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      +.++||||.|||||.|++|..||++.+......++....+.     +|..+++++++|+.+|+..||..|.|.++|+++.
T Consensus       190 G~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~-----MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP  264 (786)
T KOG0588|consen  190 GRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFE-----MPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP  264 (786)
T ss_pred             CCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCccc-----CCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence            89999999999999999999999987755544444444433     3478999999999999999999999999999875


Q ss_pred             Hh
Q psy16840        299 KH  300 (413)
Q Consensus       299 ~~  300 (413)
                      .-
T Consensus       265 ~l  266 (786)
T KOG0588|consen  265 FL  266 (786)
T ss_pred             hh
Confidence            43

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.96  E-value=3.8e-30  Score=254.52  Aligned_cols=226  Identities=17%  Similarity=0.287  Sum_probs=153.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||++++ +||||||+|||++.++.+||+|||+++........ .......||+.|+|||++.+..+    
T Consensus       151 qll--~aL~~lH~~~I-iHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~-~~~~~~~Gt~~Y~aPE~~~~~~~----  222 (496)
T PTZ00283        151 QVL--LAVHHVHSKHM-IHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSD-DVGRTFCGTPYYVAPEIWRRKPY----  222 (496)
T ss_pred             HHH--HHHHHHHhCCE-ecCCCCHHHEEEeCCCCEEEEecccCeeccccccc-cccccccCCcceeCHHHhCCCCC----
Confidence            777  99999999999 99999999999999999999999998765432211 11234578999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      +.++|||||||++|||++|..||.+................    .++..+++++.+++.+||+.||.+||++.+++...
T Consensus       223 s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p  298 (496)
T PTZ00283        223 SKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYD----PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMP  298 (496)
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCH
Confidence            89999999999999999999999765432221111111111    13467889999999999999999999999998653


Q ss_pred             HhhcccCcccHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHHhcCCHHHHHHHhcCCCC
Q psy16840        299 KHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGYGV  378 (413)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~le~~~~e~~~~l~~e~~~~~~ll~~~lp~~va~~lk~g~~v  378 (413)
                      ....      ....+.+.       .+............+...+++..+.+..++++....+....+...+..+..+...
T Consensus       299 ~~~~------~~~~~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~l~~e~~~~~~~~~e~~~~~~~~~~~~~~~~  365 (496)
T PTZ00283        299 ICKL------FISGLLEI-------VQTQPGFSGPLRDTISRQIQQTKQLLQVERRRIVRQMEESLSTAASTTILEGATP  365 (496)
T ss_pred             HHHH------hhhhHHHH-------HhhCcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccCCcc
Confidence            2110      00000111       1110011112223344455555666677777777777777777777777766554


Q ss_pred             CCCccCeEEEEe
Q psy16840        379 EPESYDLVTIYF  390 (413)
Q Consensus       379 ~~e~~~~vti~f  390 (413)
                      ... +..++++-
T Consensus       366 ~~~-~~~~~~~~  376 (496)
T PTZ00283        366 LTT-LGGLTLYE  376 (496)
T ss_pred             ccc-cCCceeee
Confidence            333 44444443

>KOG1026|consensus

Probab=99.96  E-value=1.6e-30  Score=254.78  Aligned_cols=198  Identities=23%  Similarity=0.405  Sum_probs=147.3

Q ss_pred             cCCCCCchh-----hhhhhh-hhhHhhhhhhhcc---------CCccchhhcccccCChhhHhhhccccCCchHHhhHhh
Q psy16840         85 KNGDSHAGE-----IASMSL-NLLDAVKNHKIAH---------RPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFL  149 (413)
Q Consensus        85 ~~~~~~~~~-----~~~~~~-~l~~~l~~~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yL  149 (413)
                      +-|.+..++     |++|.. +|.+||+.+.-..         .++++..+.+.|+.|            |+  .||.||
T Consensus       554 LlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~Q------------IA--aGM~YL  619 (774)
T KOG1026|consen  554 LLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQ------------IA--AGMEYL  619 (774)
T ss_pred             EEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHH------------HH--HHHHHH
Confidence            344555554     333333 6777777553211         112444444555554            44  999999


Q ss_pred             hcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHH
Q psy16840        150 HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAV  229 (413)
Q Consensus       150 H~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~  229 (413)
                      -++.+ |||||-.+||||.++..|||+|||+++-.-..+......++ .-.++|||||.+..+++    |.+||||||||
T Consensus       620 s~~~F-VHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t-~lPIRWMppEsIly~kF----TteSDVWs~GV  693 (774)
T KOG1026|consen  620 SSHHF-VHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNT-LLPIRWMPPESILYGKF----TTESDVWSFGV  693 (774)
T ss_pred             HhCcc-cccchhhhhceeccceEEEecccccchhhhhhhhhcccCCc-eeeeecCCHHHhhcCcc----cchhhhhhhhh
Confidence            99999 99999999999999999999999999865433333222122 23688999999999988    99999999999


Q ss_pred             HHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcccCc
Q psy16840        230 ILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ  306 (413)
Q Consensus       230 il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~~~~  306 (413)
                      +|||+++ |..||.+.+..+..+.+.....-    ..|.+||.++++||..||+.+|.+||+|++|-..|+.......
T Consensus       694 vLWEIFsyG~QPy~glSn~EVIe~i~~g~lL----~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~  767 (774)
T KOG1026|consen  694 VLWEIFSYGKQPYYGLSNQEVIECIRAGQLL----SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP  767 (774)
T ss_pred             hhhhhhccccCcccccchHHHHHHHHcCCcc----cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence            9999997 99999998766655544333331    2347899999999999999999999999999999998766543

>KOG0593|consensus

Probab=99.96  E-value=5.4e-30  Score=222.58  Aligned_cols=159  Identities=17%  Similarity=0.271  Sum_probs=121.5

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      --.+.++++  |++  .|+.|+|++++ |||||||+||||+.++.+||||||+|+.+....   ...+.++.|.+|.|||
T Consensus       100 ~~~vk~~l~--Q~l--~ai~~cHk~n~-IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg---d~YTDYVATRWYRaPE  171 (396)
T KOG0593|consen  100 SELVKKYLY--QLL--KAIHFCHKNNC-IHRDIKPENILITQNGVVKLCDFGFARTLSAPG---DNYTDYVATRWYRAPE  171 (396)
T ss_pred             HHHHHHHHH--HHH--HHhhhhhhcCe-ecccCChhheEEecCCcEEeccchhhHhhcCCc---chhhhhhhhhhccChh
Confidence            334555666  888  99999999999 999999999999999999999999999875321   1234567899999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-----------------------CCCCCCCCccc
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED-----------------------CEEPFRPNLEL  264 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~-----------------------~~~~~~~~~~~  264 (413)
                      .+.+...   |+..+||||+||++.||++|++-|++.+..+....+                       ..-+.......
T Consensus       172 LLvGDtq---YG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~ep  248 (396)
T KOG0593|consen  172 LLVGDTQ---YGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEP  248 (396)
T ss_pred             hhcccCc---CCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccc
Confidence            9988543   389999999999999999999999987643322200                       00011111111


Q ss_pred             c---cCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        265 L---RDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       265 ~---~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +   -+..+.-+.++++.||..||++|++.++++.+
T Consensus       249 Le~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H  284 (396)
T KOG0593|consen  249 LERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH  284 (396)
T ss_pred             hhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence            1   13567789999999999999999999999754

>KOG0983|consensus

Probab=99.96  E-value=1.3e-29  Score=217.35  Aligned_cols=147  Identities=18%  Similarity=0.293  Sum_probs=116.0

Q ss_pred             HhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccc
Q psy16840        144 QGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKA  222 (413)
Q Consensus       144 ~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  222 (413)
                      +||.||-+ +++ ||||+||+|||+|..|++|+||||++..+..+..    .....|.+.|||||.+.-... ..|+.++
T Consensus       202 ~AL~YLKeKH~v-iHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA----htrsAGC~~YMaPERidp~~~-~kYDiRa  275 (391)
T KOG0983|consen  202 KALYYLKEKHGV-IHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA----HTRSAGCAAYMAPERIDPPDK-PKYDIRA  275 (391)
T ss_pred             HHHHHHHHhcce-eecccCccceEEccCCCEEeecccccceeecccc----cccccCCccccCccccCCCCC-Cccchhh
Confidence            89999995 566 9999999999999999999999999877654333    334468899999999976543 3569999


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        223 DVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       223 Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ||||||+.++|+.||+.||.+....-.....+.....|.++.- ..+++.+.+++..||.+|+.+||.+.+++++
T Consensus       276 DVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~-~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  276 DVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGH-MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             hhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcc-cCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence            9999999999999999999886533222222222333444321 3489999999999999999999999999765

>KOG0660|consensus

Probab=99.96  E-value=7.1e-30  Score=227.63  Aligned_cols=164  Identities=21%  Similarity=0.321  Sum_probs=125.6

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..+++  ||+  +||.|+|+.++ +||||||.|+|++.+..+||+|||+|+..... .....-+.++.|.+|.|||++.
T Consensus       127 ~q~f~Y--QiL--rgLKyiHSAnV-iHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~-~~~~~mTeYVaTRWYRAPElll  200 (359)
T KOG0660|consen  127 AQYFLY--QIL--RGLKYIHSANV-IHRDLKPSNLLLNADCDLKICDFGLARYLDKF-FEDGFMTEYVATRWYRAPELLL  200 (359)
T ss_pred             HHHHHH--HHH--Hhcchhhcccc-cccccchhheeeccCCCEEeccccceeecccc-CcccchhcceeeeeecCHHHHh
Confidence            445556  888  99999999999 99999999999999999999999999987654 2223335677899999999886


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC------------------------CCCCCCCc--cc
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC------------------------EEPFRPNL--EL  264 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~------------------------~~~~~~~~--~~  264 (413)
                      ...   .|+...||||.|||+.||++|++-|.|.........+.                        ..+..|..  ..
T Consensus       201 ~~~---~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~  277 (359)
T KOG0660|consen  201 NSS---EYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSS  277 (359)
T ss_pred             ccc---cccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHH
Confidence            543   34999999999999999999999998876333222110                        11111111  12


Q ss_pred             ccCCChHHHHHHHHHHhccCCCCCCChhHHHHH--HHhhcc
Q psy16840        265 LRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR--LKHMKD  303 (413)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~--l~~~~~  303 (413)
                      +-++.++...+|+.+||..||.+|+|+++.+.+  |.....
T Consensus       278 ~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hd  318 (359)
T KOG0660|consen  278 IFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHD  318 (359)
T ss_pred             HcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcC
Confidence            225788999999999999999999999999865  444443

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.96  E-value=8e-30  Score=241.71  Aligned_cols=154  Identities=25%  Similarity=0.438  Sum_probs=118.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++....... ........+++.|+|||++.+..+    
T Consensus       182 qi~--~aL~~LH~~~i-vHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~----  253 (338)
T cd05102         182 QVA--RGMEFLASRKC-IHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGSARLPLKWMAPESIFDKVY----  253 (338)
T ss_pred             HHH--HHHHHHHHCCE-ECCCCccceEEEcCCCcEEEeecccccccccCcc-hhcccCCCCCccccCcHHhhcCCC----
Confidence            777  99999999999 9999999999999999999999999876432211 111223345678999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++|||++ |..||.+................+.   .+..+++.+.+++.+||+.||.+|||+.++++.
T Consensus       254 ~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~  330 (338)
T cd05102         254 TTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMR---APENATPEIYRIMLACWQGDPKERPTFSALVEI  330 (338)
T ss_pred             CcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            899999999999999997 9999976442211111111111111   235678899999999999999999999999999


Q ss_pred             HHhhcc
Q psy16840        298 LKHMKD  303 (413)
Q Consensus       298 l~~~~~  303 (413)
                      |+.+..
T Consensus       331 l~~~~~  336 (338)
T cd05102         331 LGDLLQ  336 (338)
T ss_pred             HHHHHh
Confidence            987654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PHA02988 hypothetical protein; Provisional

Probab=99.96  E-value=8.2e-30  Score=235.37  Aligned_cols=148  Identities=22%  Similarity=0.264  Sum_probs=117.1

Q ss_pred             CCchHHhhHhhhcC-CCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC--CCCC
Q psy16840        139 DGIPRQGMTFLHRS-PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD--THAP  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~-~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~  215 (413)
                      |++  .||.|||+. ++ +||||||+|||++.++.+||+|||+++.....      .....|+..|+|||++.+  ..+ 
T Consensus       130 ~i~--~~l~~lH~~~~~-~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~-  199 (283)
T PHA02988        130 DCC--KGLYNLYKYTNK-PYKNLTSVSFLVTENYKLKIICHGLEKILSSP------PFKNVNFMVYFSYKMLNDIFSEY-  199 (283)
T ss_pred             HHH--HHHHHHHhcCCC-CCCcCChhhEEECCCCcEEEcccchHhhhccc------cccccCcccccCHHHhhhccccc-
Confidence            555  999999985 77 89999999999999999999999998765321      123457889999999976  344 


Q ss_pred             CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        216 IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                         +.++|||||||++|||++|..||.+.+.............++..   +..+++.+.+++.+||+.||++|||+.+++
T Consensus       200 ---~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~ell  273 (283)
T PHA02988        200 ---TIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKL---PLDCPLEIKCIVEACTSHDSIKRPNIKEIL  273 (283)
T ss_pred             ---cchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCC---CCcCcHHHHHHHHHHhcCCcccCcCHHHHH
Confidence               89999999999999999999999875432222222222222322   246889999999999999999999999999


Q ss_pred             HHHHhhc
Q psy16840        296 ARLKHMK  302 (413)
Q Consensus       296 ~~l~~~~  302 (413)
                      ..|+.+.
T Consensus       274 ~~l~~~~  280 (283)
T PHA02988        274 YNLSLYK  280 (283)
T ss_pred             HHHHHHH
Confidence            9988764

>KOG0595|consensus

Probab=99.96  E-value=2.7e-30  Score=233.34  Aligned_cols=156  Identities=20%  Similarity=0.242  Sum_probs=120.7

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC------eEEEEeccccccccccccCCCcccccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR------WVLQVTDFGLHELRHCAENDSIGEHQYYR  199 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~g  199 (413)
                      +..+....||.  ||+  .||++||+++| |||||||+|||++..      -.+||+|||+|+.+....    ...+.+|
T Consensus       106 l~e~t~r~Fm~--QLA--~alq~L~~~~I-iHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~----~a~tlcG  176 (429)
T KOG0595|consen  106 LPEATARHFMQ--QLA--SALQFLHENNI-IHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS----MAETLCG  176 (429)
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCe-eeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh----HHHHhhC
Confidence            44456667777  888  99999999999 999999999999865      579999999999886332    2456799


Q ss_pred             cccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHH
Q psy16840        200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRD  279 (413)
Q Consensus       200 t~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (413)
                      ++.|||||++....|    +.|+|+||+|+|+|++++|+.||...+..+....+....  ...+.++..+++.+.+|+..
T Consensus       177 SplYMAPEV~~~~~Y----dAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~--~~~~~~~~~~s~~~~~Ll~~  250 (429)
T KOG0595|consen  177 SPLYMAPEVIMSQQY----DAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGN--EIVPVLPAELSNPLRELLIS  250 (429)
T ss_pred             CccccCHHHHHhccc----cchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccc--cccCchhhhccCchhhhhhH
Confidence            999999999998877    999999999999999999999998766444333211111  11122234556667788888


Q ss_pred             HhccCCCCCCChhHHHH
Q psy16840        280 CWAEAPESRPDFPTIRA  296 (413)
Q Consensus       280 cl~~~P~~Rps~~~i~~  296 (413)
                      .+..+|.+|-++.+...
T Consensus       251 ll~~~~~~~~~~~~~~~  267 (429)
T KOG0595|consen  251 LLQRNPKDRISFEDFFD  267 (429)
T ss_pred             HHhcCccccCchHHhhh
Confidence            88999999988776543

>KOG0583|consensus

Probab=99.96  E-value=5.2e-30  Score=242.03  Aligned_cols=148  Identities=21%  Similarity=0.283  Sum_probs=120.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-eEEEEeccccccccccccCCCcccccccCcccccCcccccCCC-CCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTH-API  216 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~  216 (413)
                      ||+  .|++|||++|+ +||||||+|||++.+ +.+||+|||++....   .......+.+||+.|+|||++.+.. +. 
T Consensus       128 Qli--sav~y~H~~gi-~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~---~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~-  200 (370)
T KOG0583|consen  128 QLI--SAVAYCHSRGI-VHRDLKPENILLDGNEGNLKLSDFGLSAISP---GEDGLLKTFCGSPAYAAPEVLSGKGTYS-  200 (370)
T ss_pred             HHH--HHHHHHHhCCE-eeCCCCHHHEEecCCCCCEEEeccccccccC---CCCCcccCCCCCcccCCHHHhCCCCCcC-
Confidence            888  99999999999 999999999999999 999999999998763   1222356779999999999999977 63 


Q ss_pred             CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCC-hHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSC-EPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       217 ~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                        +.++||||+|++||.|++|..||.+.+.......+....+     .++..+ ++++..|+.+|+..||.+|+++.+|+
T Consensus       201 --g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~-----~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  201 --GKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF-----KIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             --CchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc-----cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence              7899999999999999999999987443322222222211     233456 99999999999999999999999999


Q ss_pred             HHHHh
Q psy16840        296 ARLKH  300 (413)
Q Consensus       296 ~~l~~  300 (413)
                      ..-+-
T Consensus       274 ~h~w~  278 (370)
T KOG0583|consen  274 EHPWF  278 (370)
T ss_pred             hChhh
Confidence            55443

>KOG1095|consensus

Probab=99.96  E-value=5.3e-30  Score=259.81  Aligned_cols=190  Identities=25%  Similarity=0.410  Sum_probs=144.7

Q ss_pred             hhhhhh-hhhHhhhhhhhccCC--ccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC
Q psy16840         94 IASMSL-NLLDAVKNHKIAHRP--QETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR  170 (413)
Q Consensus        94 ~~~~~~-~l~~~l~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~  170 (413)
                      ++.|+. +|+.||++.+-....  .++...-+.+++|++              +|+.||+++++ |||||..+||||+..
T Consensus       774 leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA--------------~G~~YLe~~~f-vHRDLAaRNCLL~~~  838 (1025)
T KOG1095|consen  774 LEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVA--------------KGMNYLESKHF-VHRDLAARNCLLDER  838 (1025)
T ss_pred             ehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHh--------------hhhHHHHhCCC-cCcchhhhheeeccc
Confidence            445544 888888877433222  355555566666666              99999999999 999999999999999


Q ss_pred             eEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCC
Q psy16840        171 WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEP  249 (413)
Q Consensus       171 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~  249 (413)
                      ..|||+|||+|+.+........... ..-...|||||.+....+    |.|+|||||||++||++| |..||.+.+..+.
T Consensus       839 r~VKIaDFGlArDiy~~~yyr~~~~-a~lPvkWm~PEsl~d~iF----tskSDvWsFGVllWEifslG~~PY~~~~n~~v  913 (1025)
T KOG1095|consen  839 RVVKIADFGLARDIYDKDYYRKHGE-AMLPVKWMPPESLKDGIF----TSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV  913 (1025)
T ss_pred             CcEEEcccchhHhhhhchheeccCc-cccceecCCHHHHhhccc----ccccchhhhHHHHHHHHhCCCCCCCCcchHHH
Confidence            9999999999995433332222211 123478999999998777    999999999999999999 8999998776555


Q ss_pred             CCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcccCcc
Q psy16840        250 KGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQK  307 (413)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~~~~~  307 (413)
                      .......+ |-..   |..||..++++|.+||+.+|++||+|..|++.+..+.+....
T Consensus       914 ~~~~~~gg-RL~~---P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~  967 (1025)
T KOG1095|consen  914 LLDVLEGG-RLDP---PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG  967 (1025)
T ss_pred             HHHHHhCC-ccCC---CCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence            44333333 2222   368999999999999999999999999999988776554433

>KOG0599|consensus

Probab=99.96  E-value=2.5e-30  Score=221.57  Aligned_cols=158  Identities=17%  Similarity=0.168  Sum_probs=124.5

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      ...+|+  |++  .|+.|||.++| |||||||+|||++++.++||+|||+|..+....    .....||||+|+|||.+.
T Consensus       125 tR~iMr--qlf--egVeylHa~~I-VHRDLKpENILlddn~~i~isDFGFa~~l~~Ge----kLrelCGTPgYLAPEtik  195 (411)
T KOG0599|consen  125 TRRIMR--QLF--EGVEYLHARNI-VHRDLKPENILLDDNMNIKISDFGFACQLEPGE----KLRELCGTPGYLAPETIK  195 (411)
T ss_pred             HHHHHH--HHH--HHHHHHHHhhh-hhcccChhheeeccccceEEeccceeeccCCch----hHHHhcCCCcccChhhee
Confidence            345666  888  99999999999 999999999999999999999999998764332    245679999999999986


Q ss_pred             CCCC--CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        211 DTHA--PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       211 ~~~~--~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      -.-+  ...|+..+|+||+|+|+|.++.|.+||...........+....+....+.+ .+++.+.++||.+||+.||.+|
T Consensus       196 C~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speW-adis~~~KdLIsrlLqVdp~~R  274 (411)
T KOG0599|consen  196 CSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEW-ADISATVKDLISRLLQVDPTKR  274 (411)
T ss_pred             eecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcch-hhccccHHHHHHHHHeeCchhc
Confidence            4322  234689999999999999999999999764322222233333333333322 5788899999999999999999


Q ss_pred             CChhHHHHHH
Q psy16840        289 PDFPTIRARL  298 (413)
Q Consensus       289 ps~~~i~~~l  298 (413)
                      .|+++++.+.
T Consensus       275 itake~LaHp  284 (411)
T KOG0599|consen  275 ITAKEALAHP  284 (411)
T ss_pred             ccHHHHhcCh
Confidence            9999998754

>KOG0585|consensus

Probab=99.96  E-value=7.9e-30  Score=233.81  Aligned_cols=172  Identities=19%  Similarity=0.198  Sum_probs=133.1

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEecccccccccccc--CCCcccccccCcccc
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE--NDSIGEHQYYRSLLW  203 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~~~gt~~y  203 (413)
                      +...+...+++  |++  .||+|||.+|| |||||||+|+||+++|++||+|||.+.......  ..........|||.|
T Consensus       207 ls~~~Ar~ylr--Dvv--~GLEYLH~Qgi-iHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF  281 (576)
T KOG0585|consen  207 LSEQQARKYLR--DVV--LGLEYLHYQGI-IHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAF  281 (576)
T ss_pred             ccHHHHHHHHH--HHH--HHHHHHHhcCe-eccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccc
Confidence            44455556667  899  99999999999 999999999999999999999999987653221  111122346899999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      +|||...+.......+.+.||||+||+||.++.|+.||.+....+....+...+...+..   +...+.+++||.++|.+
T Consensus       282 ~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~---pe~~e~~kDli~~lL~K  358 (576)
T KOG0585|consen  282 FAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPEN---PEINEDLKDLIKRLLEK  358 (576)
T ss_pred             cchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCc---ccccHHHHHHHHHHhhc
Confidence            999998874322223789999999999999999999998876555555555544432221   35678999999999999


Q ss_pred             CCCCCCChhHHHHHHHhhcccC
Q psy16840        284 APESRPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l~~~~~~~  305 (413)
                      ||+.|.+..+|..+.+....+.
T Consensus       359 dP~~Ri~l~~ik~Hpwvt~~g~  380 (576)
T KOG0585|consen  359 DPEQRITLPDIKLHPWVTRDGD  380 (576)
T ss_pred             ChhheeehhhheecceeccCCC
Confidence            9999999999998887655533

>KOG0033|consensus

Probab=99.96  E-value=1.1e-29  Score=214.41  Aligned_cols=150  Identities=19%  Similarity=0.222  Sum_probs=123.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCC---eEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAP  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  215 (413)
                      ||+  +||+|+|.++| ||||+||+|+|+.+.   --+||+|||+|....    .........|||.|||||+++..++ 
T Consensus       118 QiL--eal~yCH~n~I-vHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~----~g~~~~G~~GtP~fmaPEvvrkdpy-  189 (355)
T KOG0033|consen  118 QIL--EALAYCHSNGI-VHRDLKPENLLLASKAKGAAVKLADFGLAIEVN----DGEAWHGFAGTPGYLSPEVLKKDPY-  189 (355)
T ss_pred             HHH--HHHHHHHhcCc-eeccCChhheeeeeccCCCceeecccceEEEeC----CccccccccCCCcccCHHHhhcCCC-
Confidence            888  99999999999 999999999999643   479999999998765    2223456789999999999999988 


Q ss_pred             CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        216 IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                         +..+|||+.|+|||-++.|.+||.+.+.....+.+.......+.+.+ +.++++.++|+++||..||.+|.|+.|.+
T Consensus       190 ---~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w-~~is~~Ak~LvrrML~~dP~kRIta~EAL  265 (355)
T KOG0033|consen  190 ---SKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEW-DTVTPEAKSLIRRMLTVNPKKRITADEAL  265 (355)
T ss_pred             ---CCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCccc-CcCCHHHHHHHHHHhccChhhhccHHHHh
Confidence               99999999999999999999999986544444444444433333222 57899999999999999999999999998


Q ss_pred             HHHHh
Q psy16840        296 ARLKH  300 (413)
Q Consensus       296 ~~l~~  300 (413)
                      ++.+-
T Consensus       266 ~HpWi  270 (355)
T KOG0033|consen  266 KHPWI  270 (355)
T ss_pred             CCchh
Confidence            77653

>KOG0605|consensus

Probab=99.96  E-value=4.1e-30  Score=239.43  Aligned_cols=243  Identities=14%  Similarity=0.094  Sum_probs=154.1

Q ss_pred             cceeecceEeecCcceeEEEEEeccccccccccccccccCccccCCCCCc--hhhhhhhhhhhHhhhhhhhccCCccc--
Q psy16840         42 YIVEERGVVCMKGKGEVLTYWLVGATEGAVQGRERNQVSGLPIKNGDSHA--GEIASMSLNLLDAVKNHKIAHRPQET--  117 (413)
Q Consensus        42 ~~~~~~g~v~~kg~g~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~--  117 (413)
                      -.++.-..+++.|+|....+||+.++...-..+.+.......+..+...+  -|-.+|...-..|+-...+..+....  
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY  217 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY  217 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence            44556667788899999999999887755333333333222222222111  12333333333333322222222211  


Q ss_pred             -------------hhhcccccC-ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        118 -------------LKLRIGIHS-DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       118 -------------~~~~~~i~~-~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                                   +..+.+... +++ .+.   +++.+  .|++.||+.|+ |||||||+|+|||..|++||+||||+..
T Consensus       218 LiMEylPGGD~mTLL~~~~~L~e~~a-rfY---iaE~v--lAI~~iH~~gy-IHRDIKPdNlLiD~~GHiKLSDFGLs~g  290 (550)
T KOG0605|consen  218 LIMEYLPGGDMMTLLMRKDTLTEDWA-RFY---IAETV--LAIESIHQLGY-IHRDIKPDNLLIDAKGHIKLSDFGLSTG  290 (550)
T ss_pred             EEEEecCCccHHHHHHhcCcCchHHH-HHH---HHHHH--HHHHHHHHcCc-ccccCChhheeecCCCCEeeccccccch
Confidence                         112222211 222 111   22566  79999999999 9999999999999999999999999853


Q ss_pred             ccccc----------------------CCC----------------------cccccccCcccccCcccccCCCCCCCCC
Q psy16840        184 RHCAE----------------------NDS----------------------IGEHQYYRSLLWKAPELLRDTHAPIRGT  219 (413)
Q Consensus       184 ~~~~~----------------------~~~----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~  219 (413)
                      +....                      ...                      ....+.+|||-|+|||++.+..+    +
T Consensus       291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY----~  366 (550)
T KOG0605|consen  291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGY----G  366 (550)
T ss_pred             hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCC----C
Confidence            32100                      000                      00123589999999999999988    9


Q ss_pred             ccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC---ChhHHHH
Q psy16840        220 QKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP---DFPTIRA  296 (413)
Q Consensus       220 ~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp---s~~~i~~  296 (413)
                      ..+|.||||||+|||+.|.+||.+.+..+....+......-..+. ...+++++++||.+|+. ||++|.   .++||.+
T Consensus       367 ~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~-~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~  444 (550)
T KOG0605|consen  367 KECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE-EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK  444 (550)
T ss_pred             ccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC-cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence            999999999999999999999998776554443332221111110 13567899999999999 999996   4666654


Q ss_pred             H
Q psy16840        297 R  297 (413)
Q Consensus       297 ~  297 (413)
                      +
T Consensus       445 H  445 (550)
T KOG0605|consen  445 H  445 (550)
T ss_pred             C
Confidence            3

>KOG0596|consensus

Probab=99.96  E-value=2.2e-29  Score=234.75  Aligned_cols=152  Identities=21%  Similarity=0.338  Sum_probs=113.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCC---
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAP---  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---  215 (413)
                      |++  .|+.++|++|| ||.||||.|+|+- .|.+||+|||+|..+..+.. .....+.+||+.||+||.+......   
T Consensus       468 qML--~aV~~IH~~gI-VHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT-sI~kdsQvGT~NYMsPEAl~~~~s~~~~  542 (677)
T KOG0596|consen  468 QML--LAVKTIHQHGI-VHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT-SIVKDSQVGTVNYMSPEALTDMSSSREN  542 (677)
T ss_pred             HHH--HHHHHHHHhce-eecCCCcccEEEE-eeeEEeeeechhcccCcccc-ceeeccccCcccccCHHHHhhccccccC
Confidence            677  99999999999 9999999999987 46999999999998765443 3445567899999999998654332   


Q ss_pred             ----CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-CCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        216 ----IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       216 ----~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                          ...++++||||+|||||+|+.|+.||.......... .+....-.-..+..+.  ..++.++|+.||+.||.+||+
T Consensus       543 ~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~--~~~li~~mK~CL~rdPkkR~s  620 (677)
T KOG0596|consen  543 GKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPE--NDELIDVMKCCLARDPKKRWS  620 (677)
T ss_pred             CCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCC--chHHHHHHHHHHhcCcccCCC
Confidence                234789999999999999999999997643111111 1111111111122212  223999999999999999999


Q ss_pred             hhHHHHH
Q psy16840        291 FPTIRAR  297 (413)
Q Consensus       291 ~~~i~~~  297 (413)
                      +.++++.
T Consensus       621 i~eLLqh  627 (677)
T KOG0596|consen  621 IPELLQH  627 (677)
T ss_pred             cHHHhcC
Confidence            9999875

>KOG0600|consensus

Probab=99.95  E-value=5.9e-29  Score=229.87  Aligned_cols=180  Identities=19%  Similarity=0.268  Sum_probs=135.1

Q ss_pred             hhhhhhhhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEE
Q psy16840         94 IASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVL  173 (413)
Q Consensus        94 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~  173 (413)
                      |++|..+|...+.+.              .+.+...-+..+|+  ||+  .||+|||++|+ +|||||.+|||||.+|.+
T Consensus       197 FeYMdhDL~GLl~~p--------------~vkft~~qIKc~mk--QLl--~Gl~~cH~~gv-lHRDIK~SNiLidn~G~L  257 (560)
T KOG0600|consen  197 FEYMDHDLSGLLSSP--------------GVKFTEPQIKCYMK--QLL--EGLEYCHSRGV-LHRDIKGSNILIDNNGVL  257 (560)
T ss_pred             EecccchhhhhhcCC--------------CcccChHHHHHHHH--HHH--HHHHHHhhcCe-eeccccccceEEcCCCCE
Confidence            566666665554443              23344455667788  999  99999999999 999999999999999999


Q ss_pred             EEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q psy16840        174 QVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED  253 (413)
Q Consensus       174 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~  253 (413)
                      ||+|||+|+++.......  .+..+-|++|.|||++.+...   |+.++|+||.||||.||+.|++.|.+.+..++...+
T Consensus       258 KiaDFGLAr~y~~~~~~~--~T~rVvTLWYRpPELLLG~t~---Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kI  332 (560)
T KOG0600|consen  258 KIADFGLARFYTPSGSAP--YTSRVVTLWYRPPELLLGATS---YGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKI  332 (560)
T ss_pred             EeccccceeeccCCCCcc--cccceEEeeccChHHhcCCcc---cccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHH
Confidence            999999999876543322  345567999999999998763   599999999999999999999999876522221110


Q ss_pred             C------------------CCCCCCC------cccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        254 C------------------EEPFRPN------LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       254 ~------------------~~~~~~~------~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .                  ...+.|.      +......+++...+|+..+|..||.+|.|+.+++..
T Consensus       333 fklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s  400 (560)
T KOG0600|consen  333 FKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS  400 (560)
T ss_pred             HHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence            0                  0111111      111124578899999999999999999999998754

>KOG0616|consensus

Probab=99.95  E-value=1.2e-29  Score=219.92  Aligned_cols=133  Identities=16%  Similarity=0.213  Sum_probs=116.9

Q ss_pred             cCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        138 GDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       138 ~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      |+|+  .||+|||+.++ ++|||||+|||+|.+|.+||+|||+|+....      .+.+.||||.|+|||++...++   
T Consensus       151 Aeiv--lAleylH~~~i-iYRDLKPENiLlD~~G~iKitDFGFAK~v~~------rT~TlCGTPeYLAPEii~sk~y---  218 (355)
T KOG0616|consen  151 AEIV--LALEYLHSLDI-IYRDLKPENLLLDQNGHIKITDFGFAKRVSG------RTWTLCGTPEYLAPEIIQSKGY---  218 (355)
T ss_pred             HHHH--HHHHHHHhcCe-eeccCChHHeeeccCCcEEEEeccceEEecC------cEEEecCCccccChHHhhcCCC---
Confidence            4777  99999999999 9999999999999999999999999987632      2567899999999999999988   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                       ..++|.|||||++|||+.|.+||.+.+.......++.....     +|..+++++++|+..+|+.|-.+|
T Consensus       219 -nkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~-----fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  219 -NKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVK-----FPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             -CcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCccc-----CCcccCHHHHHHHHHHHhhhhHhh
Confidence             89999999999999999999999987766666666555543     346788999999999999998888

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.95  E-value=7.7e-29  Score=228.92  Aligned_cols=156  Identities=26%  Similarity=0.424  Sum_probs=120.2

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||.|||++++ +||||||+||++++++.+||+|||+++........ .......+++.|+|||.+.
T Consensus       126 ~~~~~~--~l~--~al~~lH~~~i-~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05048         126 FLHIAI--QIA--AGMEYLSSHHF-VHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYY-RVQSKSLLPVRWMPPEAIL  199 (283)
T ss_pred             HHHHHH--HHH--HHHHHHHhCCe-eccccccceEEEcCCCcEEECCCcceeeccccccc-cccCCCcccccccCHHHhc
Confidence            334444  777  99999999999 99999999999999999999999998754322211 1122335678899999988


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++|||||||++|||++ |..||.+....+....+.... .+   ..+..+++++.+|+.+||+.||.+||
T Consensus       200 ~~~~----~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~-~~---~~~~~~~~~~~~l~~~c~~~~p~~Rp  271 (283)
T cd05048         200 YGKF----TTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQ-LL---PCPEDCPARVYALMIECWNEIPARRP  271 (283)
T ss_pred             cCcC----chhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-cC---CCcccCCHHHHHHHHHHccCChhhCc
Confidence            7766    899999999999999998 999997654322222111111 11   12367899999999999999999999


Q ss_pred             ChhHHHHHHHh
Q psy16840        290 DFPTIRARLKH  300 (413)
Q Consensus       290 s~~~i~~~l~~  300 (413)
                      ++.+|++.|+.
T Consensus       272 ~~~~i~~~l~~  282 (283)
T cd05048         272 RFKDIHTRLRS  282 (283)
T ss_pred             CHHHHHHHHhc
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.95  E-value=1.9e-28  Score=231.77  Aligned_cols=165  Identities=25%  Similarity=0.401  Sum_probs=124.2

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +.+..+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++........ ........++..|+|
T Consensus       170 l~~~~~~~~~~--qi~--~aL~~lH~~~i-vHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~-~~~~~~~~~~~~y~a  243 (337)
T cd05054         170 LTLEDLISYSF--QVA--RGMEFLASRKC-IHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGDARLPLKWMA  243 (337)
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHhCCe-ecCCCCcceEEEeCCCcEEEeccccchhcccCcc-hhhccCCCCCccccC
Confidence            34444555555  788  99999999999 9999999999999999999999999876532221 111223445678999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++.+..+    +.++|||||||++|||++ |..||.+....+..........++.   .+..+++++.+++.+||+.+
T Consensus       244 PE~~~~~~~----~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~~  316 (337)
T cd05054         244 PESIFDKVY----TTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMR---APEYATPEIYSIMLDCWHNN  316 (337)
T ss_pred             cHHhcCCCC----CccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCC---CCccCCHHHHHHHHHHccCC
Confidence            999988776    999999999999999998 9999976432211111111111211   12457789999999999999


Q ss_pred             CCCCCChhHHHHHHHhhcc
Q psy16840        285 PESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~~  303 (413)
                      |++||++.++++.|+.+..
T Consensus       317 p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         317 PEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999987643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0694|consensus

Probab=99.95  E-value=1.9e-28  Score=234.43  Aligned_cols=139  Identities=23%  Similarity=0.310  Sum_probs=116.9

Q ss_pred             cCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        138 GDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       138 ~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      |.|+  .||.|||++|| |+||||.+|||+|.+|++||+|||+++..-.   ....+.+.+|||.|||||++.+..|   
T Consensus       475 Aev~--l~L~fLH~~~I-IYRDlKLdNiLLD~eGh~kiADFGlcKe~m~---~g~~TsTfCGTpey~aPEil~e~~Y---  545 (694)
T KOG0694|consen  475 AEVV--LGLQFLHENGI-IYRDLKLDNLLLDTEGHVKIADFGLCKEGMG---QGDRTSTFCGTPEFLAPEVLTEQSY---  545 (694)
T ss_pred             HHHH--HHHHHHHhcCc-eeeecchhheEEcccCcEEecccccccccCC---CCCccccccCChhhcChhhhccCcc---
Confidence            4677  89999999999 9999999999999999999999999986432   2234678899999999999999988   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                       +..+|.|||||+||||+.|+.||.+.+..+....+......     .|..++.+...+|+++|..+|++|.-.
T Consensus       546 -t~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~-----yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  546 -TRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVR-----YPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             -cchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCC-----CCCcccHHHHHHHHHHhccCcccccCC
Confidence             99999999999999999999999987654444433332222     235788999999999999999999754

>KOG0659|consensus

Probab=99.95  E-value=2.3e-28  Score=208.93  Aligned_cols=159  Identities=21%  Similarity=0.236  Sum_probs=120.9

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      +-+.+++.  +++  +||+|||++.| +||||||.|+|++++|.+||+|||+|+.+.......   ...+-|.+|.|||.
T Consensus       101 a~iK~y~~--m~L--kGl~y~H~~~I-lHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~---~~~V~TRWYRAPEL  172 (318)
T KOG0659|consen  101 ADIKSYML--MTL--KGLAYCHSKWI-LHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ---THQVVTRWYRAPEL  172 (318)
T ss_pred             HHHHHHHH--HHH--HHHHHHHhhhh-hcccCCccceEEcCCCcEEeecccchhccCCCCccc---ccceeeeeccChHH
Confidence            33555555  777  99999999999 999999999999999999999999999876433221   22266899999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-----------------------CCCCCCCCcccc
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED-----------------------CEEPFRPNLELL  265 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~-----------------------~~~~~~~~~~~~  265 (413)
                      +.|...   |+..+||||.|||+.||+-|.+-|.+.+..++...+                       ......+....+
T Consensus       173 LfGsr~---Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~l  249 (318)
T KOG0659|consen  173 LFGSRQ---YGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNL  249 (318)
T ss_pred             hccchh---cCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccc
Confidence            988764   499999999999999999998888876633322111                       010111111222


Q ss_pred             cCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        266 RDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       266 ~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      -..+++++.+|+.++|..||.+|+++.|++++-
T Consensus       250 f~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~  282 (318)
T KOG0659|consen  250 FPAASSDALDLLSKMLTYNPKKRITASQALKHP  282 (318)
T ss_pred             cccccHHHHHHHHhhhccCchhcccHHHHhcch
Confidence            345778889999999999999999999998753

>KOG0196|consensus

Probab=99.95  E-value=2.1e-29  Score=243.06  Aligned_cols=177  Identities=23%  Similarity=0.389  Sum_probs=138.6

Q ss_pred             hhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccc
Q psy16840        100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFG  179 (413)
Q Consensus       100 ~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg  179 (413)
                      +|..||+.+.    .++++.+.+.+..+++              .||.||-+.++ |||||..+||||+++..+|++|||
T Consensus       716 sLDsFLR~~D----GqftviQLVgMLrGIA--------------sGMkYLsdm~Y-VHRDLAARNILVNsnLvCKVsDFG  776 (996)
T KOG0196|consen  716 SLDSFLRQND----GQFTVIQLVGMLRGIA--------------SGMKYLSDMNY-VHRDLAARNILVNSNLVCKVSDFG  776 (996)
T ss_pred             cHHHHHhhcC----CceEeehHHHHHHHHH--------------HHhHHHhhcCc-hhhhhhhhheeeccceEEEecccc
Confidence            7777887765    3355555444444444              99999999999 999999999999999999999999


Q ss_pred             cccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCC
Q psy16840        180 LHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPF  258 (413)
Q Consensus       180 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~  258 (413)
                      +++.+..+...........-..+|.|||.+...++    |.+|||||||++|||+++ |..||.+.+..+....+ ...+
T Consensus       777 LSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKF----TsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaI-e~gy  851 (996)
T KOG0196|consen  777 LSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKF----TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI-EQGY  851 (996)
T ss_pred             ceeecccCCCccccccCCccceeecChhHhhhccc----CchhhccccceEEEEecccCCCcccccchHHHHHHH-Hhcc
Confidence            99987554422222222222578999999999988    999999999999999886 99999887755544433 3334


Q ss_pred             CCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      |.+.+   -+||..+..||..||++|-.+||.|.+|+..|.++..
T Consensus       852 RLPpP---mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  852 RLPPP---MDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             CCCCC---CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence            43332   5799999999999999999999999999999998643

>KOG0658|consensus

Probab=99.95  E-value=5.3e-29  Score=222.49  Aligned_cols=181  Identities=20%  Similarity=0.293  Sum_probs=130.9

Q ss_pred             hhhhhhhhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-eE
Q psy16840         94 IASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-WV  172 (413)
Q Consensus        94 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-~~  172 (413)
                      ++.|-.+|.++++.+-...           ..++...+.-++.  ||+  +||+|||+.|| +||||||+|+|+|.+ |.
T Consensus       101 leymP~tL~~~~r~~~~~~-----------~~mp~~~iKLYt~--Qlf--rgl~yLh~~~I-cHRDIKPqNlLvD~~tg~  164 (364)
T KOG0658|consen  101 LEYMPETLYRVIRHYTRAN-----------QRMPLLEIKLYTY--QLF--RGLAYLHSHGI-CHRDIKPQNLLVDPDTGV  164 (364)
T ss_pred             HHhchHHHHHHHHHHhhcC-----------CCCceeeeHHHHH--HHH--HHHHHHHhcCc-ccCCCChheEEEcCCCCe
Confidence            4556667777777542211           1111222222333  777  99999999999 999999999999976 99


Q ss_pred             EEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q psy16840        173 LQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE  252 (413)
Q Consensus       173 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~  252 (413)
                      +||||||.|+....++..    .++..|..|.|||.+.+...   |+.+.||||.||++.||+-|++-|.+.+..++...
T Consensus       165 LKicDFGSAK~L~~~epn----iSYicSRyYRaPELifga~~---Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~e  237 (364)
T KOG0658|consen  165 LKICDFGSAKVLVKGEPN----ISYICSRYYRAPELIFGATE---YTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVE  237 (364)
T ss_pred             EEeccCCcceeeccCCCc----eeEEEeccccCHHHHcCccc---cCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHH
Confidence            999999999987654432    45567889999999988764   49999999999999999999999988763322111


Q ss_pred             CCC----------------------CCCC-CCc-ccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        253 DCE----------------------EPFR-PNL-ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       253 ~~~----------------------~~~~-~~~-~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +..                      ..+. ... ..+....+++..+|+.+++..+|.+|.++.+++.+
T Consensus       238 Iik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  238 IIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             HHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence            100                      0000 010 12345688999999999999999999999998753

>KOG0594|consensus

Probab=99.95  E-value=6.2e-29  Score=222.19  Aligned_cols=158  Identities=21%  Similarity=0.305  Sum_probs=119.7

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      -.+..+|+  ||+  .||+|||+++| +||||||+||||+++|.+||+|||+|+...-...   .....++|.+|.|||+
T Consensus       120 ~~ik~~m~--Qll--~gl~~~H~~~I-lHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~---~yt~evvTlWYRaPEv  191 (323)
T KOG0594|consen  120 RLIKSFMR--QLL--RGLAFLHSHGI-LHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR---TYTPEVVTLWYRAPEV  191 (323)
T ss_pred             HHHHHHHH--HHH--HHHHHHHhCCe-ecccCCcceEEECCCCcEeeeccchHHHhcCCcc---cccccEEEeeccCHHH
Confidence            45677888  999  99999999999 9999999999999999999999999986542221   1334567999999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC----------------CCCCCCCCCCc---------c
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG----------------EDCEEPFRPNL---------E  263 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~----------------~~~~~~~~~~~---------~  263 (413)
                      +.+...   |+...||||+|||+.||++++.-|.+.+..+...                ......+.+..         .
T Consensus       192 LlGs~~---Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~  268 (323)
T KOG0594|consen  192 LLGSTS---YSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLS  268 (323)
T ss_pred             hcCCCc---CCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchH
Confidence            998854   3999999999999999999999998765221111                00000001000         0


Q ss_pred             cccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       264 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ...+...++..+++.+|++.+|.+|.|++.++.+
T Consensus       269 ~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  269 SILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             HhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence            1112334689999999999999999999998876

>KOG0597|consensus

Probab=99.95  E-value=5e-29  Score=232.72  Aligned_cols=144  Identities=19%  Similarity=0.331  Sum_probs=123.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||+.+| +|||+||+|||++..+++|+||||+|+....+   .....+..|||.|||||+..+..+    
T Consensus       108 ~LV--saL~yLhs~ri-lhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~---t~vltsikGtPlYmAPElv~e~py----  177 (808)
T KOG0597|consen  108 DLV--SALYYLHSNRI-LHRDMKPQNILLEKGGTLKLCDFGLARAMSTN---TSVLTSIKGTPLYMAPELVEEQPY----  177 (808)
T ss_pred             HHH--HHHHHHHhcCc-ccccCCcceeeecCCCceeechhhhhhhcccC---ceeeeeccCcccccCHHHHcCCCc----
Confidence            666  99999999999 99999999999999999999999999987542   333567789999999999998887    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +..+|+||+|||+||+++|++||...+.......+...+..++     ...+..+.+++...|.+||..|.+..+++.+
T Consensus       178 d~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p-----~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  178 DHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP-----STASSSFVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             cchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc-----ccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence            9999999999999999999999987665554444544444332     4788899999999999999999999998754

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.95  E-value=1.2e-28  Score=228.92  Aligned_cols=156  Identities=14%  Similarity=0.225  Sum_probs=118.1

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC----CcccccccCcccccCcc
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND----SIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~gt~~y~aPE  207 (413)
                      ..++.  |++  .||+|||++++ +||||||+|||++.++.+||+|||+|+........    ........||+.|+|||
T Consensus       129 ~~i~~--qi~--~~l~~lH~~~i-iHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape  203 (294)
T PHA02882        129 KNIMK--DML--TTLEYIHEHGI-SHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLD  203 (294)
T ss_pred             HHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHH
Confidence            34555  777  99999999999 99999999999999999999999999765322111    11122346899999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-----CCCCCCCCcccccCCChHHHHHHHHHHhc
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED-----CEEPFRPNLELLRDSCEPFVLACMRDCWA  282 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (413)
                      ++.+..+    +.++|||||||++|||++|..||.+.+........     ......+..  ....+++++.+++..||.
T Consensus       204 ~~~~~~~----~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  277 (294)
T PHA02882        204 AHNGACV----TRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKI--KIKNANKFIYDFIECVTK  277 (294)
T ss_pred             HhCCCCC----CcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHh
Confidence            9988776    99999999999999999999999875322111100     000011111  124578899999999999


Q ss_pred             cCCCCCCChhHHHHHH
Q psy16840        283 EAPESRPDFPTIRARL  298 (413)
Q Consensus       283 ~~P~~Rps~~~i~~~l  298 (413)
                      .+|++||++.++++.|
T Consensus       278 ~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        278 LSYEEKPDYDALIKIF  293 (294)
T ss_pred             CCCCCCCCHHHHHHhh
Confidence            9999999999998765

>KOG1187|consensus

Probab=99.95  E-value=2.2e-28  Score=230.51  Aligned_cols=180  Identities=23%  Similarity=0.321  Sum_probs=130.6

Q ss_pred             hhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCC--CcccCCCCCCCeEEcCCeEEEEec
Q psy16840        100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSP--IGCHGNLKSSNCVVTSRWVLQVTD  177 (413)
Q Consensus       100 ~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~--iiiHrdlkp~Nill~~~~~~kl~D  177 (413)
                      +|.++|......   .++|..|+.|++++|              +||+|||+..  .||||||||+|||+|+++.+||+|
T Consensus       158 sL~d~L~~~~~~---~L~W~~R~kIa~g~A--------------~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD  220 (361)
T KOG1187|consen  158 SLEDHLHGKKGE---PLDWETRLKIALGAA--------------RGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD  220 (361)
T ss_pred             CHHHHhCCCCCC---CCCHHHHHHHHHHHH--------------HHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence            777777665433   679999999999888              9999999744  349999999999999999999999


Q ss_pred             cccccccccccCCCcccccc-cCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-----
Q psy16840        178 FGLHELRHCAENDSIGEHQY-YRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----  251 (413)
Q Consensus       178 fg~a~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-----  251 (413)
                      ||+|+..... ...  .... .||..|+|||++.....    +.++||||||+++.|++||+.|...........     
T Consensus       221 FGLa~~~~~~-~~~--~~~~~~gt~gY~~PEy~~~g~l----t~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~  293 (361)
T KOG1187|consen  221 FGLAKLGPEG-DTS--VSTTVMGTFGYLAPEYASTGKL----TEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWA  293 (361)
T ss_pred             ccCcccCCcc-ccc--eeeecCCCCccCChhhhccCCc----CcccccccchHHHHHHHhCCcccCCCCCcccccHHHHH
Confidence            9999665321 111  1111 78999999999988666    999999999999999999998876432111110     


Q ss_pred             ------CCCCCCCCCCccc--ccC-CChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        252 ------EDCEEPFRPNLEL--LRD-SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       252 ------~~~~~~~~~~~~~--~~~-~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                            ........|.+..  .+. ..-..+..+...|++.+|..||++.+++..|+.+..
T Consensus       294 ~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  294 KPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             HHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence                  1122223333221  010 122346677789999999999999999888865543

>KOG4257|consensus

Probab=99.95  E-value=2.9e-28  Score=229.80  Aligned_cols=152  Identities=26%  Similarity=0.428  Sum_probs=127.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||+..+ |||||..+|||+.+.-.|||+|||+++.+.........  ...-.+.|||||.++-..+    
T Consensus       499 Qi~--talaYLeSkrf-VHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS--~~kLPIKWmaPESINfRrF----  569 (974)
T KOG4257|consen  499 QIC--TALAYLESKRF-VHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS--RGKLPIKWMAPESINFRRF----  569 (974)
T ss_pred             HHH--HHHHHHHhhch-hhhhhhhhheeecCcceeeecccchhhhccccchhhcc--ccccceeecCccccchhcc----
Confidence            777  99999999999 99999999999999999999999999987654432221  2223578999999988877    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.+||||.||+++||++. |..||.+....+....+ ..+.|++.   |++||+.++.||.+||+.+|.+||+|.++...
T Consensus       570 TtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i-EnGeRlP~---P~nCPp~LYslmskcWayeP~kRPrftei~~~  645 (974)
T KOG4257|consen  570 TTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI-ENGERLPC---PPNCPPALYSLMSKCWAYEPSKRPRFTEIKAI  645 (974)
T ss_pred             cchhhHHHHHHHHHHHHHhcCCccccccccceEEEe-cCCCCCCC---CCCCChHHHHHHHHHhccCcccCCcHHHHHHH
Confidence            999999999999999997 99999987766655443 33444444   47999999999999999999999999999999


Q ss_pred             HHhhcc
Q psy16840        298 LKHMKD  303 (413)
Q Consensus       298 l~~~~~  303 (413)
                      |..+..
T Consensus       646 lsdv~q  651 (974)
T KOG4257|consen  646 LSDVLQ  651 (974)
T ss_pred             HHHHHH
Confidence            887765

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.95  E-value=2.7e-28  Score=233.93  Aligned_cols=163  Identities=23%  Similarity=0.384  Sum_probs=122.0

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +++..+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++........ .......++..|+|
T Consensus       209 l~~~~~~~i~~--qi~--~aL~yLH~~gi-iHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~a  282 (374)
T cd05106         209 LDLDDLLRFSS--QVA--QGMDFLASKNC-IHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY-VVKGNARLPVKWMA  282 (374)
T ss_pred             cCHHHHHHHHH--HHH--HHHHHHHHCCE-EeccCchheEEEeCCCeEEEeeceeeeeccCCcce-eeccCCCCccceeC
Confidence            34444455555  888  99999999999 99999999999999999999999998765322111 11122234667999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++.+..+    +.++|||||||++|+|++ |..||.................++.   .+...++++.+++.+||+.|
T Consensus       283 PE~~~~~~~----~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~d  355 (374)
T cd05106         283 PESIFDCVY----TVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMS---RPDFAPPEIYSIMKMCWNLE  355 (374)
T ss_pred             HHHhcCCCC----CccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCcc---CCCCCCHHHHHHHHHHcCCC
Confidence            999987766    899999999999999997 9999976432211111111112221   12456889999999999999


Q ss_pred             CCCCCChhHHHHHHHhh
Q psy16840        285 PESRPDFPTIRARLKHM  301 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~  301 (413)
                      |.+|||+.++++.|+++
T Consensus       356 p~~RPs~~~l~~~l~~~  372 (374)
T cd05106         356 PTERPTFSQISQLIQRQ  372 (374)
T ss_pred             hhhCcCHHHHHHHHHHH
Confidence            99999999999998875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG4278|consensus

Probab=99.95  E-value=1.7e-28  Score=231.18  Aligned_cols=156  Identities=29%  Similarity=0.496  Sum_probs=127.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||.  .||.||..+++ |||||..+|||+.++..||++|||+++++..+......  ...-.+.|.|||.+..+.+    
T Consensus       373 QIs--SaMeYLEkknF-IHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHA--GAKFPIKWTAPEsLAyNtF----  443 (1157)
T KOG4278|consen  373 QIS--SAMEYLEKKNF-IHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHA--GAKFPIKWTAPESLAYNTF----  443 (1157)
T ss_pred             HHH--HHHHHHHHhhh-hhhhhhhhhccccccceEEeeccchhhhhcCCceeccc--CccCcccccCccccccccc----
Confidence            555  99999999999 99999999999999999999999999998765443221  1122578999999998888    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.|+|||+||++|||+.| |-.||.+....... ......++...   +.+||+.+++||+.||+..|.+||+|.++-+.
T Consensus       444 SiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY-~LLEkgyRM~~---PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqa  519 (1157)
T KOG4278|consen  444 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-GLLEKGYRMDG---PEGCPPKVYELMRACWNWSPSDRPSFAEIHQA  519 (1157)
T ss_pred             ccchhhHHHHHHHHHHHhcCCCCCCCccHHHHH-HHHhccccccC---CCCCCHHHHHHHHHHhcCCcccCccHHHHHHH
Confidence            999999999999999997 88899886533222 22334444433   37899999999999999999999999999999


Q ss_pred             HHhhcccCcc
Q psy16840        298 LKHMKDGKQK  307 (413)
Q Consensus       298 l~~~~~~~~~  307 (413)
                      ++.+......
T Consensus       520 fEtmf~~sSi  529 (1157)
T KOG4278|consen  520 FETMFSSSSI  529 (1157)
T ss_pred             HHHHhccccc
Confidence            9999876543

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.95  E-value=4.8e-28  Score=224.46  Aligned_cols=153  Identities=22%  Similarity=0.344  Sum_probs=115.5

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++.....    .......|++.|+|||++.
T Consensus       112 ~~~i~~--qi~--~aL~~lH~~~i-iH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~  182 (290)
T cd07862         112 IKDMMF--QLL--RGLDFLHSHRV-VHRDLKPQNILVTSSGQIKLADFGLARIYSFQ----MALTSVVVTLWYRAPEVLL  182 (290)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-eeCCCCHHHEEEcCCCCEEEccccceEeccCC----cccccccccccccChHHHh
Confidence            334444  777  99999999999 99999999999999999999999998765322    1223456899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC----------------------CCCCCCCCcccccCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----------------------CEEPFRPNLELLRDS  268 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~  268 (413)
                      +..+    +.++|||||||++|||++|.+||.+....+....+                      .............+.
T Consensus       183 ~~~~----~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (290)
T cd07862         183 QSSY----ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTD  258 (290)
T ss_pred             CCCC----CCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccC
Confidence            7766    88999999999999999999999765421110000                      000000111122245


Q ss_pred             ChHHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        269 CEPFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       269 ~~~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                      +++.+.+++.+||+.||++|||+.++++
T Consensus       259 ~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         259 IDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             CCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            7888999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.95  E-value=5.5e-28  Score=220.09  Aligned_cols=152  Identities=24%  Similarity=0.422  Sum_probs=116.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++|+ +||||||.||+++.++.+||+|||+++................++..|+|||.+.....    
T Consensus       103 qi~--~al~~lH~~~i-~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~----  175 (257)
T cd05116         103 QVS--MGMKYLEETNF-VHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKF----  175 (257)
T ss_pred             HHH--HHHHHHHHCCE-eecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCc----
Confidence            677  99999999999 99999999999999999999999998765433221111122234578999999877665    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++|||++ |..||.+.........+. ....+.   .+..+++++.++|.+||+.||++||++.+|...
T Consensus       176 ~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~-~~~~~~---~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~  251 (257)
T cd05116         176 SSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIE-SGERME---CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELR  251 (257)
T ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-CCCCCC---CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHH
Confidence            889999999999999998 999997654222111111 111222   235688999999999999999999999999998


Q ss_pred             HHhh
Q psy16840        298 LKHM  301 (413)
Q Consensus       298 l~~~  301 (413)
                      |+..
T Consensus       252 l~~~  255 (257)
T cd05116         252 LRNY  255 (257)
T ss_pred             Hhcc
Confidence            8753

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.95  E-value=6.4e-28  Score=231.54  Aligned_cols=164  Identities=22%  Similarity=0.350  Sum_probs=123.5

Q ss_pred             cCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       125 ~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      .+++..+..++.  ||+  .||+|||++++ +||||||+|||++.++.+||+|||+++........ .......++..|+
T Consensus       210 ~l~~~~~~~~~~--qi~--~~l~~lH~~~i-vH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~~~~~y~  283 (375)
T cd05104         210 ALDTEDLLSFSY--QVA--KGMSFLASKNC-IHRDLAARNILLTHGRITKICDFGLARDIRNDSNY-VVKGNARLPVKWM  283 (375)
T ss_pred             CCCHHHHHHHHH--HHH--HHHHHHHHCCe-eccCCchhhEEEECCCcEEEecCccceeccCcccc-cccCCCCCCccee
Confidence            456666666666  888  99999999999 99999999999999999999999998765332211 1112233467799


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      |||++.+..+    +.++|||||||++|||++ |..||.................++..   +...+.++.+++.+||+.
T Consensus       284 aPE~~~~~~~----~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~  356 (375)
T cd05104         284 APESIFNCVY----TFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLS---PECAPSEMYDIMKSCWDA  356 (375)
T ss_pred             ChhHhcCCCC----CCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCC---CCCCCHHHHHHHHHHccC
Confidence            9999988776    899999999999999998 88898764322111111111122211   234678999999999999


Q ss_pred             CCCCCCChhHHHHHHHhh
Q psy16840        284 APESRPDFPTIRARLKHM  301 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l~~~  301 (413)
                      ||++|||+.++++.|++.
T Consensus       357 dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         357 DPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             ChhHCcCHHHHHHHHHhh
Confidence            999999999999998753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.95  E-value=3.5e-28  Score=230.41  Aligned_cols=160  Identities=18%  Similarity=0.316  Sum_probs=115.6

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++................||+.|+|||++.
T Consensus       105 ~~~i~~--qi~--~aL~~LH~~~i-vH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  179 (338)
T cd07859         105 HQFFLY--QLL--RALKYIHTANV-FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG  179 (338)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-ecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHh
Confidence            334444  777  99999999999 9999999999999999999999999876433222222223457899999999987


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---------------C-----------CCCCCCCCCccc
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------------E-----------DCEEPFRPNLEL  264 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---------------~-----------~~~~~~~~~~~~  264 (413)
                      +...  .++.++|||||||++|+|++|+.||.+.+......               .           ............
T Consensus       180 ~~~~--~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  257 (338)
T cd07859         180 SFFS--KYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQ  257 (338)
T ss_pred             cccc--ccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHH
Confidence            6211  22889999999999999999999997643211000               0           000000011111


Q ss_pred             ccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        265 LRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ..+.+++.+.+++.+||+.||++|||++++++.
T Consensus       258 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         258 KFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             hcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            113567889999999999999999999999875

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.95  E-value=5.5e-28  Score=223.26  Aligned_cols=161  Identities=22%  Similarity=0.391  Sum_probs=121.5

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +.+..+..++.  |++  .||.|||++|+ +||||||+||++++++.+||+|||+++........ .......+++.|+|
T Consensus       121 ~~~~~~~~~~~--ql~--~aL~~lH~~gi-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~a  194 (283)
T cd05091         121 LEPADFVHIVT--QIA--AGMEFLSSHHV-VHKDLATRNVLVFDKLNVKISDLGLFREVYAADYY-KLMGNSLLPIRWMS  194 (283)
T ss_pred             cCHHHHHHHHH--HHH--HHHHHHHHcCc-cccccchhheEecCCCceEecccccccccccchhe-eeccCccCCccccC
Confidence            34444445555  777  99999999999 99999999999999999999999998765322211 11223345778999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||.+.+..+    +.++|||||||++|||++ |..||.+.........+.....    ...+..++..+.+++.+||+.+
T Consensus       195 PE~~~~~~~----~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~li~~cl~~~  266 (283)
T cd05091         195 PEAIMYGKF----SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQV----LPCPDDCPAWVYTLMLECWNEF  266 (283)
T ss_pred             HHHHhcCCC----CcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc----CCCCCCCCHHHHHHHHHHhCCC
Confidence            999977766    889999999999999998 8888876443222211111111    1223678999999999999999


Q ss_pred             CCCCCChhHHHHHHHh
Q psy16840        285 PESRPDFPTIRARLKH  300 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~  300 (413)
                      |.+||++.+|+..|+.
T Consensus       267 p~~RP~~~~i~~~l~~  282 (283)
T cd05091         267 PSRRPRFKDIHSRLRT  282 (283)
T ss_pred             cccCCCHHHHHHHhhC
Confidence            9999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.95  E-value=6.9e-28  Score=223.58  Aligned_cols=165  Identities=21%  Similarity=0.308  Sum_probs=124.1

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +.+..+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++......... .......++..|+|
T Consensus       120 ~~~~~~~~i~~--~i~--~al~~lH~~~i-~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~-~~~~~~~~~~~y~a  193 (291)
T cd05094         120 LGLSQMLHIAS--QIA--SGMVYLASQHF-VHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY-RVGGHTMLPIRWMP  193 (291)
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHhCCe-eecccCcceEEEccCCcEEECCCCcccccCCCcee-ecCCCCCcceeecC
Confidence            34444445555  777  99999999999 99999999999999999999999998754322111 11223356788999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||.+.+..+    +.++||||||+++|||++ |..||............ .....+   ..+..++..+.+++.+||+.+
T Consensus       194 PE~~~~~~~----~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~li~~~l~~~  265 (291)
T cd05094         194 PESIMYRKF----TTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI-TQGRVL---ERPRVCPKEVYDIMLGCWQRE  265 (291)
T ss_pred             hHHhccCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-hCCCCC---CCCccCCHHHHHHHHHHcccC
Confidence            999987766    889999999999999998 99998664422211111 111111   122457889999999999999


Q ss_pred             CCCCCChhHHHHHHHhhccc
Q psy16840        285 PESRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~~~  304 (413)
                      |++||++.++++.|+.+...
T Consensus       266 P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         266 PQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             hhhCcCHHHHHHHHHHHHhh
Confidence            99999999999999988654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.95  E-value=5.6e-28  Score=225.62  Aligned_cols=161  Identities=22%  Similarity=0.335  Sum_probs=116.3

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++........ .......++..|+|||+
T Consensus       138 ~~~~~i~~--~i~--~al~~lH~~~i-vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~~~~~~y~aPE~  211 (304)
T cd05096         138 SSLLHVAL--QIA--SGMKYLSSLNF-VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY-RIQGRAVLPIRWMAWEC  211 (304)
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCc-cccCcchhheEEcCCccEEECCCccceecccCcee-EecCcCCCCccccCHHH
Confidence            33444555  777  99999999999 99999999999999999999999998754322111 11223345788999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHh--CCCCCCCCCCCCCCCCC---CCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIG--RRGPFGGCGLYEPKGED---CEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~--g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      +.+..+    +.++||||||+++|||++  +..||.+.+........   ............+..+++.+.+++.+||+.
T Consensus       212 ~~~~~~----~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  287 (304)
T cd05096         212 ILMGKF----TTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSR  287 (304)
T ss_pred             HhcCCC----CchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccC
Confidence            887766    899999999999999987  56677654322111100   000000111112346788999999999999


Q ss_pred             CCCCCCChhHHHHHHH
Q psy16840        284 APESRPDFPTIRARLK  299 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l~  299 (413)
                      ||.+|||+.+|...|+
T Consensus       288 ~p~~RPs~~~i~~~l~  303 (304)
T cd05096         288 DCRERPSFSDIHAFLT  303 (304)
T ss_pred             CchhCcCHHHHHHHHh
Confidence            9999999999988775

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.95  E-value=7.2e-28  Score=221.07  Aligned_cols=157  Identities=27%  Similarity=0.405  Sum_probs=118.3

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||+|||++++ +||||||+|||++.++.+||+|||+++........ .......+++.|+|||.+.
T Consensus       114 ~~~~~~--~i~--~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~  187 (272)
T cd05075         114 LVKFMT--DIA--SGMEYLSSKSF-IHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYY-RQGRIAKMPVKWIAIESLA  187 (272)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-eccccchhheEEcCCCCEEECCCCcccccCcccce-ecCCcccCCcccCCHHHcc
Confidence            334444  777  99999999999 99999999999999999999999998865432211 1112234567899999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++||||||+++||+++ |..||.+............ ...+.   .+..++..+.+++.+||+.+|++||
T Consensus       188 ~~~~----~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp  259 (272)
T cd05075         188 DRVY----TTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ-GNRLK---QPPDCLDGLYSLMSSCWLLNPKDRP  259 (272)
T ss_pred             CCCc----ChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-CCCCC---CCCCCCHHHHHHHHHHcCCCcccCc
Confidence            8766    899999999999999999 8899976432211111111 11111   2246788999999999999999999


Q ss_pred             ChhHHHHHHHhh
Q psy16840        290 DFPTIRARLKHM  301 (413)
Q Consensus       290 s~~~i~~~l~~~  301 (413)
                      |+.++++.|+.+
T Consensus       260 s~~~l~~~l~~~  271 (272)
T cd05075         260 SFETLRCELEKA  271 (272)
T ss_pred             CHHHHHHHHHhh
Confidence            999999988764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG4279|consensus

Probab=99.95  E-value=6.5e-28  Score=229.87  Aligned_cols=148  Identities=20%  Similarity=0.339  Sum_probs=120.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEc-CCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVT-SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      ||+  +||.|||++.| ||||||-+||||+ -.|.+||+|||-++.+...   ...+.+..||+.|||||++..+.-  .
T Consensus       683 QIL--eGLkYLHen~I-VHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi---nP~TETFTGTLQYMAPEvIDqG~R--G  754 (1226)
T KOG4279|consen  683 QIL--EGLKYLHENKI-VHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI---NPCTETFTGTLQYMAPEVIDQGPR--G  754 (1226)
T ss_pred             HHH--HHhhhhhhcce-eeccccCCcEEEeeccceEEecccccchhhccC---CccccccccchhhhChHhhccCCc--C
Confidence            788  99999999999 9999999999997 4699999999999876432   223556789999999999987653  5


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-CCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                      |+.++|||||||++.||.||++||.......... ...--...|+   +|..++.+.+.+|.+|+..||.+||++.+++.
T Consensus       755 YG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~---iPeelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  755 YGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPP---IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             CCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCC---CcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            6999999999999999999999997655322221 2222223333   45788999999999999999999999999986


Q ss_pred             H
Q psy16840        297 R  297 (413)
Q Consensus       297 ~  297 (413)
                      .
T Consensus       832 D  832 (1226)
T KOG4279|consen  832 D  832 (1226)
T ss_pred             C
Confidence            3

>KOG0604|consensus

Probab=99.95  E-value=7.9e-28  Score=208.83  Aligned_cols=163  Identities=16%  Similarity=0.136  Sum_probs=125.1

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC---CeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS---RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      .++++  ||.  .|+.|||+.+| .||||||+|+|...   |..+||+|||+|+....    .....+.+-|+.|.|||+
T Consensus       164 ~eI~~--qI~--~Av~~lH~~nI-AHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~----~~~L~TPc~TPyYvaPev  234 (400)
T KOG0604|consen  164 SEIMK--QIG--LAVRYLHSMNI-AHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE----PGDLMTPCFTPYYVAPEV  234 (400)
T ss_pred             HHHHH--HHH--HHHHHHHhcch-hhccCChhheeeecCCCCcceEecccccccccCC----CccccCCcccccccCHHH
Confidence            45566  777  99999999999 99999999999975   46899999999986432    222445677999999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC----CCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK----GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      +....+    +...|+||+||++|-|++|.+||.........    .++....+..+.+. .+.+++..+++|+.+|..+
T Consensus       235 lg~eKy----dkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pE-Ws~VSe~aKdlIR~LLkt~  309 (400)
T KOG0604|consen  235 LGPEKY----DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPE-WSCVSEAAKDLIRKLLKTE  309 (400)
T ss_pred             hCchhc----CCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChh-HhHHHHHHHHHHHHHhcCC
Confidence            988887    89999999999999999999999765422111    12222222222222 2568999999999999999


Q ss_pred             CCCCCChhHHHHHHHhhcccCccc
Q psy16840        285 PESRPDFPTIRARLKHMKDGKQKN  308 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~~~~~~~  308 (413)
                      |.+|.|+.++++.-+-.......+
T Consensus       310 PteRlTI~~~m~hpwi~~~~~vp~  333 (400)
T KOG0604|consen  310 PTERLTIEEVMDHPWINQYEAVPQ  333 (400)
T ss_pred             chhheeHHHhhcCchhcccccCCC
Confidence            999999999998876555444333

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.94  E-value=2.1e-27  Score=219.33  Aligned_cols=163  Identities=21%  Similarity=0.340  Sum_probs=119.8

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..+..++.  |++  .||.|||++++ +||||||+|||++.++.+||+|||+++................++..|+|||
T Consensus       106 ~~~~~~i~~--~l~--~~l~~lH~~~i-~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE  180 (283)
T cd05080         106 LAQLLLFAQ--QIC--EGMAYLHSQHY-IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVE  180 (283)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCe-eccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHh
Confidence            333444444  777  99999999999 9999999999999999999999999876543222111112234566799999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--CC------------CCCCCCCCcccccCCChHHH
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--ED------------CEEPFRPNLELLRDSCEPFV  273 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--~~------------~~~~~~~~~~~~~~~~~~~l  273 (413)
                      .+.+...    +.++||||||+++|+|++|..||..........  ..            ......+   ..+..++..+
T Consensus       181 ~~~~~~~----~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  253 (283)
T cd05080         181 CLKENKF----SYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRL---PCPKNCPQEV  253 (283)
T ss_pred             HhcccCC----CcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCC---CCCCCCCHHH
Confidence            9987766    899999999999999999999986432110000  00            0001111   1235678999


Q ss_pred             HHHHHHHhccCCCCCCChhHHHHHHHhhc
Q psy16840        274 LACMRDCWAEAPESRPDFPTIRARLKHMK  302 (413)
Q Consensus       274 ~~li~~cl~~~P~~Rps~~~i~~~l~~~~  302 (413)
                      .+++.+||+.+|++|||+++++..|+.+.
T Consensus       254 ~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         254 YILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             HHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            99999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.94  E-value=1.1e-27  Score=220.91  Aligned_cols=162  Identities=22%  Similarity=0.337  Sum_probs=122.0

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||+|||++++ +||||||+|||++.++.+||+|||+++........ .......++..|+|||.+.
T Consensus       111 ~~~i~~--qi~--~~l~~lH~~~i-iH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~~pE~~~  184 (279)
T cd05111         111 LLNWCV--QIA--KGMYYLEEHRM-VHRNLAARNILLKSDSIVQIADFGVADLLYPDDKK-YFYSEHKTPIKWMALESIL  184 (279)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCE-eccccCcceEEEcCCCcEEEcCCccceeccCCCcc-cccCCCCCcccccCHHHhc
Confidence            334444  777  99999999998 99999999999999999999999998765322211 1122344677899999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++||||||+++||+++ |..||.+........ ......++..   +..++.++.+++.+||..||.+||
T Consensus       185 ~~~~----~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~li~~c~~~~p~~Rp  256 (279)
T cd05111         185 FGRY----THQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPD-LLEKGERLAQ---PQICTIDVYMVMVKCWMIDENVRP  256 (279)
T ss_pred             cCCc----CchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHHCCCcCCC---CCCCCHHHHHHHHHHcCCCcccCc
Confidence            7766    899999999999999998 999997653221111 1111112211   234677899999999999999999


Q ss_pred             ChhHHHHHHHhhcccCc
Q psy16840        290 DFPTIRARLKHMKDGKQ  306 (413)
Q Consensus       290 s~~~i~~~l~~~~~~~~  306 (413)
                      |+.++++.|..+.....
T Consensus       257 s~~el~~~l~~~~~~~~  273 (279)
T cd05111         257 TFKELANEFTRMARDPP  273 (279)
T ss_pred             CHHHHHHHHHHHHhCCc
Confidence            99999999988766543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.94  E-value=3.8e-28  Score=224.64  Aligned_cols=147  Identities=18%  Similarity=0.218  Sum_probs=112.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++++ +||||||+|||+++++.+||+|||++.......    ......||+.|+|||++.+..+    
T Consensus       110 qi~--~~l~~lH~~~i-iH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~----  178 (285)
T cd05631         110 ELC--CGLEDLQRERI-VYRDLKPENILLDDRGHIRISDLGLAVQIPEGE----TVRGRVGTVGYMAPEVINNEKY----  178 (285)
T ss_pred             HHH--HHHHHHHhCCE-EeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC----eecCCCCCCCccCHhhhcCCCC----
Confidence            777  99999999999 999999999999999999999999987643211    1234468999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC-----hhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD-----FPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps-----~~~  293 (413)
                      +.++|||||||++|+|++|+.||.+........... ..........+..+++++.+|+.+||+.||.+||+     +++
T Consensus       179 ~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~  257 (285)
T cd05631         179 TFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVD-RRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAG  257 (285)
T ss_pred             CcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHH-HHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHH
Confidence            899999999999999999999998644221111000 00011111233567889999999999999999997     666


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      +++.
T Consensus       258 ~~~h  261 (285)
T cd05631         258 VKQH  261 (285)
T ss_pred             HhcC
Confidence            6653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.94  E-value=8.9e-28  Score=222.48  Aligned_cols=164  Identities=20%  Similarity=0.319  Sum_probs=122.6

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..+..++.  |++  .||+|||++|+ +||||||+||++++++.+||+|||+++........ .......++..|+||
T Consensus       118 ~~~~~~~~~~--ql~--~aL~~lH~~~i-~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aP  191 (288)
T cd05093         118 TQSQMLHIAQ--QIA--AGMVYLASQHF-VHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY-RVGGHTMLPIRWMPP  191 (288)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCe-eecccCcceEEEccCCcEEeccCCccccccCCcee-ecCCCCCccccccCH
Confidence            3333444444  777  99999999999 99999999999999999999999998755322111 111223456789999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |.+.+..+    +.++|||||||++|+|++ |..||...........+..... +   ..+..+++++.+++.+||+.||
T Consensus       192 E~~~~~~~----~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~-~---~~~~~~~~~l~~li~~~l~~~p  263 (288)
T cd05093         192 ESIMYRKF----TTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV-L---QRPRTCPKEVYDLMLGCWQREP  263 (288)
T ss_pred             HHhccCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc-C---CCCCCCCHHHHHHHHHHccCCh
Confidence            99987766    889999999999999998 8999876442221111111111 1   1224578899999999999999


Q ss_pred             CCCCChhHHHHHHHhhccc
Q psy16840        286 ESRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~~~  304 (413)
                      .+|||+.++...|+.+...
T Consensus       264 ~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         264 HMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             hhCCCHHHHHHHHHHHHHh
Confidence            9999999999999887643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=1e-27  Score=218.31  Aligned_cols=152  Identities=22%  Similarity=0.382  Sum_probs=115.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++++ +||||||+|||++.++.+||+|||+++................++..|+|||.+.+..+    
T Consensus       103 qi~--~~l~~lh~~~i-~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~----  175 (257)
T cd05060         103 QVA--MGMAYLESKHF-VHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKF----  175 (257)
T ss_pred             HHH--HHHHHHhhcCe-eccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCC----
Confidence            666  99999999999 99999999999999999999999998765432211111112223567999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++ |..||............. .....   ..+..+++.+.+++.+||..+|++||++.++++.
T Consensus       176 ~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~  251 (257)
T cd05060         176 SSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLE-SGERL---PRPEECPQEIYSIMLSCWKYRPEDRPTFSELEST  251 (257)
T ss_pred             CccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH-cCCcC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            889999999999999998 999997643221111111 11111   1235678899999999999999999999999999


Q ss_pred             HHhh
Q psy16840        298 LKHM  301 (413)
Q Consensus       298 l~~~  301 (413)
                      |+.+
T Consensus       252 l~~~  255 (257)
T cd05060         252 FRRD  255 (257)
T ss_pred             HHhc
Confidence            8765

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.94  E-value=3.8e-28  Score=231.50  Aligned_cols=161  Identities=16%  Similarity=0.203  Sum_probs=116.4

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......   .......||..|+|||+
T Consensus       168 ~~~~~i~~--qi~--~aL~~LH~~~i-vHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~---~~~~~~~gt~~y~aPE~  239 (353)
T PLN00034        168 QFLADVAR--QIL--SGIAYLHRRHI-VHRDIKPSNLLINSAKNVKIADFGVSRILAQTM---DPCNSSVGTIAYMSPER  239 (353)
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCE-eecCCCHHHEEEcCCCCEEEcccccceeccccc---ccccccccCccccCccc
Confidence            33445555  888  99999999999 999999999999999999999999987653221   11234578999999998


Q ss_pred             ccCCCCC-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        209 LRDTHAP-IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       209 ~~~~~~~-~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      +...... ...+.++|||||||++|||++|+.||............... ........+..+++++.++|.+||+.||++
T Consensus       240 ~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~P~~  318 (353)
T PLN00034        240 INTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI-CMSQPPEAPATASREFRHFISCCLQREPAK  318 (353)
T ss_pred             cccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH-hccCCCCCCCccCHHHHHHHHHHccCChhh
Confidence            8543210 11256899999999999999999999743211111000000 000111123567889999999999999999


Q ss_pred             CCChhHHHHHH
Q psy16840        288 RPDFPTIRARL  298 (413)
Q Consensus       288 Rps~~~i~~~l  298 (413)
                      |||+.+++++-
T Consensus       319 Rpt~~ell~hp  329 (353)
T PLN00034        319 RWSAMQLLQHP  329 (353)
T ss_pred             CcCHHHHhcCc
Confidence            99999998764

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.94  E-value=5.7e-28  Score=223.76  Aligned_cols=155  Identities=18%  Similarity=0.236  Sum_probs=112.9

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......   .......+++.|+|||++.+
T Consensus       106 ~~~~~--qi~--~aL~~LH~~~i-vH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~  177 (288)
T cd07871         106 KIFMF--QLL--RGLSYCHKRKI-LHRDLKPQNLLINEKGELKLADFGLARAKSVPT---KTYSNEVVTLWYRPPDVLLG  177 (288)
T ss_pred             HHHHH--HHH--HHHHHHHhCCc-ccCCCCHHHEEECCCCCEEECcCcceeeccCCC---ccccCceecccccChHHhcC
Confidence            34444  777  99999999999 999999999999999999999999987543211   11233467899999999875


Q ss_pred             CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---------------C---------CCCCCCC-CCccccc
Q psy16840        212 THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------------E---------DCEEPFR-PNLELLR  266 (413)
Q Consensus       212 ~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---------------~---------~~~~~~~-~~~~~~~  266 (413)
                      ...   ++.++||||+||++|+|++|+.||.+.+..+...               .         ......+ .......
T Consensus       178 ~~~---~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (288)
T cd07871         178 STE---YSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHA  254 (288)
T ss_pred             Ccc---cCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhC
Confidence            431   2889999999999999999999997644211000               0         0000000 0001112


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        267 DSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       267 ~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ..+++++.+|+.+||..||.+|||+++++++
T Consensus       255 ~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         255 PRLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             CCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            3567889999999999999999999999754

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.94  E-value=9.1e-28  Score=218.67  Aligned_cols=152  Identities=22%  Similarity=0.406  Sum_probs=115.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.................++..|+|||.+.+..+    
T Consensus       103 ~i~--~~l~~lH~~~i-~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~----  175 (257)
T cd05115         103 QVS--MGMKYLEGKNF-VHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKF----  175 (257)
T ss_pred             HHH--HHHHHHHhcCe-eecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCC----
Confidence            666  99999999999 99999999999999999999999998765332221111112223578999999887666    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++ |..||.+.......... ....++.   .+..+++++.+++.+||..+|++||++.+|.+.
T Consensus       176 ~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~  251 (257)
T cd05115         176 SSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFI-EQGKRLD---CPAECPPEMYALMKDCWIYKWEDRPNFAKVEER  251 (257)
T ss_pred             CchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH-HCCCCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            889999999999999996 99999765422211111 1111221   235678999999999999999999999999998


Q ss_pred             HHhh
Q psy16840        298 LKHM  301 (413)
Q Consensus       298 l~~~  301 (413)
                      |+.+
T Consensus       252 l~~~  255 (257)
T cd05115         252 MRTY  255 (257)
T ss_pred             Hhhh
Confidence            8764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.94  E-value=9.3e-28  Score=225.39  Aligned_cols=155  Identities=24%  Similarity=0.381  Sum_probs=119.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++++ +||||||+|||++.++.+||+|||+++......... ......++..|+|||.+.+..+    
T Consensus       117 qi~--~~L~~LH~~~i-iH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~----  188 (316)
T cd05108         117 QIA--KGMNYLEERRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEY-HAEGGKVPIKWMALESILHRIY----  188 (316)
T ss_pred             HHH--HHHHHHHhcCe-eccccchhheEecCCCcEEEccccccccccCCCcce-eccCCccceeecChHHhccCCC----
Confidence            777  99999999999 999999999999999999999999998764322211 1122234678999999987776    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++||+++ |..||.+....... .......++..   +..++.++.+++.+||..+|.+||++.+++..
T Consensus       189 ~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         189 THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQ---PPICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             CchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHhCCCCCCC---CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            899999999999999997 99999764322211 11111112111   24577899999999999999999999999999


Q ss_pred             HHhhcccC
Q psy16840        298 LKHMKDGK  305 (413)
Q Consensus       298 l~~~~~~~  305 (413)
                      +..+....
T Consensus       265 l~~~~~~~  272 (316)
T cd05108         265 FSKMARDP  272 (316)
T ss_pred             HHHHHcCC
Confidence            98876543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.94  E-value=1.5e-28  Score=224.02  Aligned_cols=172  Identities=28%  Similarity=0.468  Sum_probs=121.1

Q ss_pred             hhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccc
Q psy16840        100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFG  179 (413)
Q Consensus       100 ~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg  179 (413)
                      +|.++|+..   ....+++..+..++.            ||+  .||.|||++++ +|+||+|+|||+++++.+||+|||
T Consensus        87 ~L~~~L~~~---~~~~~~~~~~~~i~~------------~i~--~~l~~Lh~~~i-iH~~l~~~nill~~~~~~Kl~~f~  148 (259)
T PF07714_consen   87 SLDDYLKSK---NKEPLSEQQRLSIAI------------QIA--EALSYLHSNNI-IHGNLSPSNILLDSNGQVKLSDFG  148 (259)
T ss_dssp             BHHHHHHHT---CTTTSBHHHHHHHHH------------HHH--HHHHHHHHTTE-EEST-SGGGEEEETTTEEEEESTT
T ss_pred             ccccccccc---ccccccccccccccc------------ccc--ccccccccccc-cccccccccccccccccccccccc
Confidence            566666665   122344444444444            555  99999999998 999999999999999999999999


Q ss_pred             cccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCC
Q psy16840        180 LHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPF  258 (413)
Q Consensus       180 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~  258 (413)
                      ++......... .......+...|+|||.+.+..+    +.++||||||+++||+++ |+.||.+.......... ....
T Consensus       149 ~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~----~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~-~~~~  222 (259)
T PF07714_consen  149 LSRPISEKSKY-KNDSSQQLPLRYLAPEVLKDGEY----TKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL-KQGQ  222 (259)
T ss_dssp             TGEETTTSSSE-EESTTSESGGGGS-HHHHHHSEE----SHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH-HTTE
T ss_pred             ccccccccccc-ccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccc-cccc
Confidence            98765221111 11223345778999999988876    999999999999999999 78998764322211111 1222


Q ss_pred             CCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ++.   .+..++..+.++|.+||+.+|++|||+.++++.|
T Consensus       223 ~~~---~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  223 RLP---IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             ETT---SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             cce---eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            222   2356899999999999999999999999998875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.94  E-value=3.2e-28  Score=229.12  Aligned_cols=144  Identities=19%  Similarity=0.233  Sum_probs=113.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+..+    
T Consensus       103 qi~--~~L~~lH~~~i-vHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  172 (323)
T cd05571         103 EIV--SALGYLHSCDV-VYRDLKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKTFCGTPEYLAPEVLEDNDY----  172 (323)
T ss_pred             HHH--HHHHHHHhCCe-EeCCCCHHHEEECCCCCEEEeeCCCCcccccCC---CcccceecCccccChhhhcCCCC----
Confidence            777  99999999999 999999999999999999999999987532111   11234578999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----ChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~  293 (413)
                      +.++|||||||++|||++|..||.+.+.......+....     ..++..+++++.+++.+||+.||++||     ++.+
T Consensus       173 ~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~-----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~  247 (323)
T cd05571         173 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE-----IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKE  247 (323)
T ss_pred             CccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHH
Confidence            899999999999999999999997644222111111111     112356889999999999999999999     7888


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++++
T Consensus       248 ll~h  251 (323)
T cd05571         248 IMEH  251 (323)
T ss_pred             HHcC
Confidence            7654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.94  E-value=3.4e-27  Score=221.61  Aligned_cols=163  Identities=18%  Similarity=0.236  Sum_probs=114.2

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEE----cCCeEEEEeccccccccccccCCCcccccccCccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVV----TSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL  202 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~  202 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||+    +.++.+||+|||+++................||+.
T Consensus       106 ~~~~~~~i~~--qi~--~al~~LH~~~i-vHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~  180 (317)
T cd07868         106 PRGMVKSLLY--QIL--DGIHYLHANWV-LHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW  180 (317)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCE-EcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCcccccc
Confidence            3344455666  888  99999999999 999999999999    45578999999999876433222222334578999


Q ss_pred             ccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC------------CCC------------CC-
Q psy16840        203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE------------DCE------------EP-  257 (413)
Q Consensus       203 y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~------------~~~------------~~-  257 (413)
                      |+|||++.+...   ++.++||||+||++|+|++|+.||...........            ...            .. 
T Consensus       181 y~aPE~~~~~~~---~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (317)
T cd07868         181 YRAPELLLGARH---YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPE  257 (317)
T ss_pred             ccCCHHHcCCCC---cCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccc
Confidence            999999876432   28899999999999999999999965331100000            000            00 


Q ss_pred             -------CC----------CCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        258 -------FR----------PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       258 -------~~----------~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                             ..          ..........+..+.+||.+||+.||.+|||+++++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h  314 (317)
T cd07868         258 HSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD  314 (317)
T ss_pred             hhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence                   00          00000001234578899999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.94  E-value=2.1e-27  Score=218.89  Aligned_cols=157  Identities=23%  Similarity=0.367  Sum_probs=118.7

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  ||+  .||.|||++|+ +||||||+||+++.++.+||+|||++......... .......+++.|+|||+
T Consensus       122 ~~~~~~~~--~i~--~~l~~lH~~~i-~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~  195 (280)
T cd05049         122 SQLLQIAV--QIA--SGMVYLASQHF-VHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYY-RVGGHTMLPIRWMPPES  195 (280)
T ss_pred             HHHHHHHH--HHH--HHHHHHhhCCe-eccccccceEEEcCCCeEEECCcccceecccCcce-ecCCCCcccceecChhh
Confidence            33344444  777  99999999999 99999999999999999999999998754322111 11122345678999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      +.+..+    +.++||||||+++|||++ |..||.+...............    ...+..++..+.+++.+||+.||++
T Consensus       196 ~~~~~~----~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~  267 (280)
T cd05049         196 IMYRKF----TTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRL----LQRPRTCPSEVYDIMLGCWKRDPQQ  267 (280)
T ss_pred             hccCCc----chhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCc----CCCCCCCCHHHHHHHHHHcCCCccc
Confidence            988776    899999999999999998 9999876443222111111111    1122467889999999999999999


Q ss_pred             CCChhHHHHHHH
Q psy16840        288 RPDFPTIRARLK  299 (413)
Q Consensus       288 Rps~~~i~~~l~  299 (413)
                      ||++.++++.|+
T Consensus       268 Rp~~~eil~~l~  279 (280)
T cd05049         268 RINIKDIHERLQ  279 (280)
T ss_pred             CCCHHHHHHHhh
Confidence            999999998875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.94  E-value=5.3e-27  Score=218.94  Aligned_cols=155  Identities=18%  Similarity=0.275  Sum_probs=110.9

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ..++.  ||+  .||+|||++++ +||||||+|||++.++.+||+|||++.......   .......+++.|+|||++.+
T Consensus       106 ~~~~~--qi~--~al~~lH~~~i-vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~  177 (303)
T cd07869         106 KLFLF--QLL--RGLSYIHQRYI-LHRDLKPQNLLISDTGELKLADFGLARAKSVPS---HTYSNEVVTLWYRPPDVLLG  177 (303)
T ss_pred             HHHHH--HHH--HHHHHHHHCCe-ecCCCCHHHEEECCCCCEEECCCCcceeccCCC---ccCCCCcccCCCCChHHHcC
Confidence            34444  777  99999999999 999999999999999999999999986542211   11233467899999999875


Q ss_pred             CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC------------CC----C-CCCCCCC---------Cccc-
Q psy16840        212 THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK------------GE----D-CEEPFRP---------NLEL-  264 (413)
Q Consensus       212 ~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~------------~~----~-~~~~~~~---------~~~~-  264 (413)
                      ...   ++.++|||||||++|+|++|..||.+.......            ..    . ......+         .... 
T Consensus       178 ~~~---~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (303)
T cd07869         178 STE---YSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQA  254 (303)
T ss_pred             CCC---CCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHH
Confidence            432   288999999999999999999999764211000            00    0 0000000         0000 


Q ss_pred             -ccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        265 -LRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       265 -~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                       .....++.+.+|+.+||+.||.+|||+.+++++
T Consensus       255 ~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h  288 (303)
T cd07869         255 WNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH  288 (303)
T ss_pred             hhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence             001245788999999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0199|consensus

Probab=99.94  E-value=3.3e-27  Score=225.31  Aligned_cols=148  Identities=25%  Similarity=0.433  Sum_probs=121.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.||.++++ |||||..+|+|+...-.+||+|||+.+.+..+...........-...|+|||.++...+    
T Consensus       220 QiA--~aM~YLeskrl-vHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kF----  292 (1039)
T KOG0199|consen  220 QIA--KAMQYLESKRL-VHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKF----  292 (1039)
T ss_pred             HHH--HHHHHHhhhhh-hhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccc----
Confidence            566  99999999999 99999999999999999999999999987655443322222333578999999999988    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.+||||+|||++|||++ |+.||.+.+.......+- ...+...   +..|++++++++..||+.+|.+||+|..|.+.
T Consensus       293 ShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD-~~erLpR---Pk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  293 SHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID-AGERLPR---PKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             cccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc-ccccCCC---CCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence            999999999999999998 899999887555554443 2222222   36899999999999999999999999999744

>KOG0194|consensus

Probab=99.94  E-value=2.3e-28  Score=232.06  Aligned_cols=178  Identities=26%  Similarity=0.476  Sum_probs=142.6

Q ss_pred             hhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccc
Q psy16840        100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFG  179 (413)
Q Consensus       100 ~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg  179 (413)
                      +|.+||+....    .+++.+++..+++.+              .||+|||++++ |||||-.+|||++.++.+||+|||
T Consensus       247 sL~~~L~k~~~----~v~~~ek~~~~~~AA--------------~Gl~YLh~k~~-IHRDIAARNcL~~~~~~vKISDFG  307 (474)
T KOG0194|consen  247 SLDDYLKKNKK----SLPTLEKLRFCYDAA--------------RGLEYLHSKNC-IHRDIAARNCLYSKKGVVKISDFG  307 (474)
T ss_pred             cHHHHHHhCCC----CCCHHHHHHHHHHHH--------------hHHHHHHHCCC-cchhHhHHHheecCCCeEEeCccc
Confidence            88888887753    466666766666666              99999999999 999999999999999999999999


Q ss_pred             cccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCC
Q psy16840        180 LHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPF  258 (413)
Q Consensus       180 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~  258 (413)
                      +++....  . ........-...|+|||.+....+    +.++|||||||++||+++ |..||.+....+....+.....
T Consensus       308 Ls~~~~~--~-~~~~~~~klPirWLAPEtl~~~~~----s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~  380 (474)
T KOG0194|consen  308 LSRAGSQ--Y-VMKKFLKKLPIRWLAPETLNTGIF----SFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGY  380 (474)
T ss_pred             cccCCcc--e-eeccccccCcceecChhhhccCcc----ccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCc
Confidence            9875421  1 111111123578999999998876    999999999999999998 8889998776655555545555


Q ss_pred             CCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcccCc
Q psy16840        259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ  306 (413)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~~~~  306 (413)
                      +...+   ...|.++..++.+||..+|++||++.++.+.++.+.....
T Consensus       381 r~~~~---~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  381 RMPIP---SKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             cCCCC---CCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence            55443   4788899999999999999999999999999988876544

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.94  E-value=2.2e-27  Score=218.84  Aligned_cols=155  Identities=25%  Similarity=0.382  Sum_probs=117.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++++ +||||||+|||+++++.+||+|||+++........ .......+++.|+|||.+.+..+    
T Consensus       117 qi~--~~L~~lH~~~i-iH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~----  188 (279)
T cd05109         117 QIA--KGMSYLEEVRL-VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE-YHADGGKVPIKWMALESILHRRF----  188 (279)
T ss_pred             HHH--HHHHHHHHCCe-eccccccceEEEcCCCcEEECCCCceeecccccce-eecCCCccchhhCCHHHhccCCC----
Confidence            677  99999999999 99999999999999999999999998765432211 11112234678999999977766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++||+++ |..||.......... .......+.   .+..++..+.+++.+||..||+.||++.+++..
T Consensus       189 ~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~  264 (279)
T cd05109         189 THQSDVWSYGVTVWELMTFGAKPYDGIPAREIPD-LLEKGERLP---QPPICTIDVYMIMVKCWMIDSECRPRFRELVDE  264 (279)
T ss_pred             CchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHHCCCcCC---CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            899999999999999998 899986543211111 111111111   124578899999999999999999999999999


Q ss_pred             HHhhcccC
Q psy16840        298 LKHMKDGK  305 (413)
Q Consensus       298 l~~~~~~~  305 (413)
                      |..+....
T Consensus       265 l~~~~~~~  272 (279)
T cd05109         265 FSRMARDP  272 (279)
T ss_pred             HHHhhcCC
Confidence            88776544

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.94  E-value=2.6e-27  Score=216.37  Aligned_cols=150  Identities=30%  Similarity=0.522  Sum_probs=116.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++++ +||||||+||++++++.+||+|||++.........  ......++..|+|||.+.+...    
T Consensus       112 ql~--~~l~~lH~~~i-~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~----  182 (263)
T cd05052         112 QIS--SAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT--AHAGAKFPIKWTAPESLAYNKF----  182 (263)
T ss_pred             HHH--HHHHHHHhCCE-eecccCcceEEEcCCCcEEeCCCccccccccceee--ccCCCCCccccCCHHHhccCCC----
Confidence            777  99999999999 99999999999999999999999998765432211  1112233567999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++|||++ |..||.+.......... ....++.   .+..+++++.+++.+||+.+|++||++.++++.
T Consensus       183 ~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~  258 (263)
T cd05052         183 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-EKGYRME---RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA  258 (263)
T ss_pred             CchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HCCCCCC---CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence            889999999999999998 89999764422211111 1111221   235688999999999999999999999999999


Q ss_pred             HHhh
Q psy16840        298 LKHM  301 (413)
Q Consensus       298 l~~~  301 (413)
                      |+.+
T Consensus       259 l~~~  262 (263)
T cd05052         259 FETM  262 (263)
T ss_pred             HHhh
Confidence            8765

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=6.2e-28  Score=226.11  Aligned_cols=145  Identities=19%  Similarity=0.234  Sum_probs=112.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+..+    
T Consensus       101 qi~--~~l~~lH~~~i-~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  170 (312)
T cd05585         101 ELL--CALENLHKFNV-IYRDLKPENILLDYQGHIALCDFGLCKLNMKDD---DKTNTFCGTPEYLAPELLLGHGY----  170 (312)
T ss_pred             HHH--HHHHHHHhCCe-EeCCCCHHHeEECCCCcEEEEECcccccCccCC---CccccccCCcccCCHHHHcCCCC----
Confidence            777  99999999999 999999999999999999999999987532211   12234578999999999988766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      +.++|||||||++|+|++|..||.+.+............     ..++..+++.+.+++.+||..||.+||++..+.+.|
T Consensus       171 ~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l  245 (312)
T cd05585         171 TKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP-----LRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK  245 (312)
T ss_pred             CCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC-----CCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence            899999999999999999999997654222211111111     123356889999999999999999998765444444

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.94  E-value=2.1e-27  Score=216.08  Aligned_cols=151  Identities=26%  Similarity=0.436  Sum_probs=115.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++++ +||||||+||+++.++.+||+|||+++................++..|+|||.+.+..+    
T Consensus       105 qi~--~~L~~lH~~~i-~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~----  177 (257)
T cd05040         105 QIA--NGMRYLESKRF-IHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTF----  177 (257)
T ss_pred             HHH--HHHHHHHhCCc-cccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCc----
Confidence            677  99999999999 99999999999999999999999998876432221111223456788999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++|+|++ |..||...+..+.............   .+..++..+.+++.+||+.+|++|||+.++++.
T Consensus       178 ~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~  254 (257)
T cd05040         178 SHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLE---RPEACPQDIYNVMLQCWAHNPADRPTFAALREF  254 (257)
T ss_pred             CchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCC---CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHH
Confidence            889999999999999998 9999965442221111111111111   224578899999999999999999999999987


Q ss_pred             HH
Q psy16840        298 LK  299 (413)
Q Consensus       298 l~  299 (413)
                      |.
T Consensus       255 l~  256 (257)
T cd05040         255 LP  256 (257)
T ss_pred             hc
Confidence            74

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.94  E-value=7.3e-28  Score=235.43  Aligned_cols=150  Identities=18%  Similarity=0.250  Sum_probs=112.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-eEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      ||+  .||+|||++++ +||||||+|||++.+ +.+||+|||+|+......    ......||+.|+|||++.+...   
T Consensus       178 qi~--~gL~yLH~~~I-iHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~---  247 (440)
T PTZ00036        178 QLC--RALAYIHSKFI-CHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ----RSVSYICSRFYRAPELMLGATN---  247 (440)
T ss_pred             HHH--HHHHHHHHCCE-ecCCcCHHHEEEcCCCCceeeeccccchhccCCC----CcccCCCCcCccCHHHhcCCCC---
Confidence            777  99999999999 999999999999966 479999999998653221    1234567999999999876431   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC----------------------CCCC--CCcccccCCChHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCE----------------------EPFR--PNLELLRDSCEPFV  273 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~----------------------~~~~--~~~~~~~~~~~~~l  273 (413)
                      ++.++|||||||++|||++|.+||.+.+..+....+..                      ....  .....++...++++
T Consensus       248 ~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~  327 (440)
T PTZ00036        248 YTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDA  327 (440)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHH
Confidence            28999999999999999999999987542211100000                      0000  00112334578899


Q ss_pred             HHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        274 LACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       274 ~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      .+||.+||..||.+|||+.+++.+.
T Consensus       328 ~~li~~~L~~dP~~R~ta~e~l~hp  352 (440)
T PTZ00036        328 INFISQFLKYEPLKRLNPIEALADP  352 (440)
T ss_pred             HHHHHHHCCCChhHCcCHHHHhCCh
Confidence            9999999999999999999998653

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.94  E-value=3.8e-27  Score=218.13  Aligned_cols=156  Identities=18%  Similarity=0.236  Sum_probs=115.4

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||+.++ +||||||+||+++.++.+||+|||++........  .......|++.|+|||++.
T Consensus       102 ~~~~~~--qi~--~~L~~lH~~~i-~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  174 (287)
T cd07848         102 VRSYIY--QLI--KAIHWCHKNDI-VHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN--ANYTEYVATRWYRSPELLL  174 (287)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-ecCCCCHHHEEEcCCCcEEEeeccCccccccccc--ccccccccccccCCcHHHc
Confidence            344455  788  99999999999 9999999999999999999999999876532211  1123456899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC--------------------CCCCCCCCCc-------c
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE--------------------DCEEPFRPNL-------E  263 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~--------------------~~~~~~~~~~-------~  263 (413)
                      +..+    +.++|||||||++|||++|+.||.+.+.......                    .......+..       .
T Consensus       175 ~~~~----~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (287)
T cd07848         175 GAPY----GKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLER  250 (287)
T ss_pred             CCCC----CCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHH
Confidence            7766    8899999999999999999999976432110000                    0000000000       0


Q ss_pred             cccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       264 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .....+++++.+++.+||+.||++|||+++++++
T Consensus       251 ~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         251 RYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             hhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            1112467889999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.94  E-value=2.6e-27  Score=218.45  Aligned_cols=159  Identities=23%  Similarity=0.366  Sum_probs=118.4

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ++..+..++.  ||+  .||+|||+.|+ +||||||+|||+++++.+||+|||++......... .......+++.|+||
T Consensus       120 ~~~~~~~~~~--qi~--~al~~LH~~~i-~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aP  193 (280)
T cd05092         120 TLGQMLAIAS--QIA--SGMVYLASLHF-VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY-RVGGRTMLPIRWMPP  193 (280)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCe-ecccccHhhEEEcCCCCEEECCCCceeEcCCCcee-ecCCCccccccccCH
Confidence            3444445555  777  99999999999 99999999999999999999999998754322111 111223346789999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |.+.+..+    +.++|||||||++|||++ |..||............. ....+   ..+..+++.+.+++.+||+.||
T Consensus       194 E~~~~~~~----~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~li~~cl~~~P  265 (280)
T cd05092         194 ESILYRKF----TTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT-QGREL---ERPRTCPPEVYAIMQGCWQREP  265 (280)
T ss_pred             HHhccCCc----CchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH-cCccC---CCCCCCCHHHHHHHHHHccCCh
Confidence            99987766    899999999999999998 899986543221111111 11111   1224678899999999999999


Q ss_pred             CCCCChhHHHHHHH
Q psy16840        286 ESRPDFPTIRARLK  299 (413)
Q Consensus       286 ~~Rps~~~i~~~l~  299 (413)
                      .+||++.+++..|+
T Consensus       266 ~~Rp~~~~l~~~l~  279 (280)
T cd05092         266 QQRMVIKDIHSRLQ  279 (280)
T ss_pred             hhCCCHHHHHHHHh
Confidence            99999999998875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.94  E-value=2.6e-27  Score=216.08  Aligned_cols=149  Identities=25%  Similarity=0.467  Sum_probs=114.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||+.++ +||||||+||+++.++.+||+|||++........  .......++..|+|||.+.+...    
T Consensus       111 ~l~--~~l~~LH~~~i-~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~----  181 (261)
T cd05072         111 QIA--EGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVIEDNEY--TAREGAKFPIKWTAPEAINFGSF----  181 (261)
T ss_pred             HHH--HHHHHHHHCCe-eccccchhhEEecCCCcEEECCCccceecCCCce--eccCCCccceecCCHHHhccCCC----
Confidence            666  99999999999 9999999999999999999999999876532211  11122345678999999887766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|+|++ |..||............. ...+..   ....++.++.+++.+||..+|++||+++++.+.
T Consensus       182 ~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  257 (261)
T cd05072         182 TIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQ-RGYRMP---RMENCPDELYDIMKTCWKEKAEERPTFDYLQSV  257 (261)
T ss_pred             ChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHH-cCCCCC---CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            889999999999999998 999997643222111111 111111   124578899999999999999999999999998


Q ss_pred             HHh
Q psy16840        298 LKH  300 (413)
Q Consensus       298 l~~  300 (413)
                      |+.
T Consensus       258 l~~  260 (261)
T cd05072         258 LDD  260 (261)
T ss_pred             Hhc
Confidence            875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.94  E-value=5.6e-27  Score=223.73  Aligned_cols=154  Identities=20%  Similarity=0.296  Sum_probs=114.8

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....    .......||+.|+|||++.
T Consensus       121 ~~~~~~--qi~--~aL~~LH~~gi-vHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~t~~y~aPE~~~  191 (355)
T cd07874         121 MSYLLY--QML--CGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----FMMTPYVVTRYYRAPEVIL  191 (355)
T ss_pred             HHHHHH--HHH--HHHHHHHhCCc-ccCCCChHHEEECCCCCEEEeeCcccccCCCc----cccCCccccCCccCHHHHc
Confidence            334455  888  99999999999 99999999999999999999999998764321    1123456899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC-----------------------------C--------
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE-----------------------------D--------  253 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~-----------------------------~--------  253 (413)
                      +..+    +.++|||||||++|+|++|+.||.+.........                             .        
T Consensus       192 ~~~~----~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (355)
T cd07874         192 GMGY----KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL  267 (355)
T ss_pred             CCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhh
Confidence            8766    8999999999999999999999976431110000                             0        


Q ss_pred             CCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        254 CEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ......+.........+..+.+++.+||..||.+|||+.+++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         268 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             ccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence            00000000011112345688999999999999999999999876

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.94  E-value=4.8e-27  Score=218.56  Aligned_cols=163  Identities=26%  Similarity=0.421  Sum_probs=121.4

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..+..++.  |++  .||+|||++|+ +||||||+|||++.++.+||+|||++.......    .......+..|+|||
T Consensus       118 ~~~~~~i~~--qi~--~al~~lH~~~i-vH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE  188 (297)
T cd05089         118 SQQLLQFAS--DVA--TGMQYLSEKQF-IHRDLAARNVLVGENLASKIADFGLSRGEEVYV----KKTMGRLPVRWMAIE  188 (297)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCc-ccCcCCcceEEECCCCeEEECCcCCCcccccee----ccCCCCcCccccCch
Confidence            333444444  777  99999999999 999999999999999999999999976422110    111112345799999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      .+.+..+    +.++|||||||++|||++ |..||.+........... ....+.   .+..+++.+.+++.+||..+|.
T Consensus       189 ~~~~~~~----~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~li~~~l~~~p~  260 (297)
T cd05089         189 SLNYSVY----TTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLP-QGYRME---KPRNCDDEVYELMRQCWRDRPY  260 (297)
T ss_pred             hhccCCC----CchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-cCCCCC---CCCCCCHHHHHHHHHHcCCChh
Confidence            9987766    899999999999999997 999997654222111111 111111   2246788999999999999999


Q ss_pred             CCCChhHHHHHHHhhcccCcc
Q psy16840        287 SRPDFPTIRARLKHMKDGKQK  307 (413)
Q Consensus       287 ~Rps~~~i~~~l~~~~~~~~~  307 (413)
                      +|||+.+++..|..+......
T Consensus       261 ~Rp~~~~i~~~l~~~~~~~~~  281 (297)
T cd05089         261 ERPPFAQISVQLSRMLEARKA  281 (297)
T ss_pred             hCcCHHHHHHHHHHHHHhhcc
Confidence            999999999999887765544

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.94  E-value=4.3e-27  Score=214.72  Aligned_cols=153  Identities=25%  Similarity=0.433  Sum_probs=113.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC-cccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      ||+  .||+|||+.++ +||||||+|||+++++.+||+|||+++......... .......++..|+|||.+.+..+   
T Consensus       106 ~i~--~~l~~lH~~~i-~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~---  179 (262)
T cd05058         106 QVA--KGMEYLASKKF-VHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKF---  179 (262)
T ss_pred             HHH--HHHHHHHhCCc-cccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCcc---
Confidence            666  99999999999 999999999999999999999999987543221111 11123345678999999887766   


Q ss_pred             CCccchhHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                       +.++||||||+++|||++| .+||............ .....+.   .+..+++.+.+++.+||..+|++||++.+++.
T Consensus       180 -~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~  254 (262)
T cd05058         180 -TTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYL-LQGRRLL---QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS  254 (262)
T ss_pred             -chHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-hcCCCCC---CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence             8999999999999999995 5666543321111111 1111111   12456789999999999999999999999999


Q ss_pred             HHHhhc
Q psy16840        297 RLKHMK  302 (413)
Q Consensus       297 ~l~~~~  302 (413)
                      .|+.+.
T Consensus       255 ~l~~~~  260 (262)
T cd05058         255 RIEQIF  260 (262)
T ss_pred             HHHHHh
Confidence            998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.94  E-value=4.4e-27  Score=222.19  Aligned_cols=153  Identities=20%  Similarity=0.312  Sum_probs=113.6

Q ss_pred             HhhhccccCCchHHhhHhhhcC-CCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRS-PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~-~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      +..++.  |++  .||.|||+. ++ +||||||+|||++.++.+||+|||++......     ......|++.|+|||++
T Consensus       105 ~~~~~~--~i~--~~l~~lH~~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~g~~~y~aPE~~  174 (331)
T cd06649         105 LGKVSI--AVL--RGLAYLREKHQI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERL  174 (331)
T ss_pred             HHHHHH--HHH--HHHHHHhhcCCE-EcCCCChhhEEEcCCCcEEEccCccccccccc-----ccccCCCCcCcCCHhHh
Confidence            334444  777  999999986 57 99999999999999999999999998754321     12345689999999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--------------CCCC--------------------
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--------------EDCE--------------------  255 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--------------~~~~--------------------  255 (413)
                      .+..+    +.++|||||||++|||++|+.||......+...              ....                    
T Consensus       175 ~~~~~----~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (331)
T cd06649         175 QGTHY----SVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPA  250 (331)
T ss_pred             cCCCC----CchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccc
Confidence            88766    899999999999999999999996432110000              0000                    


Q ss_pred             -----------CCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHH
Q psy16840        256 -----------EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK  299 (413)
Q Consensus       256 -----------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~  299 (413)
                                 ...++..+  ...+++++.+||.+||..||++|||+.+++++..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~  303 (331)
T cd06649         251 MAIFELLDYIVNEPPPKLP--NGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF  303 (331)
T ss_pred             hhHHHHHHHHHhCCCcCCC--CccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence                       00000000  1246789999999999999999999999987654

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.94  E-value=1.3e-27  Score=225.34  Aligned_cols=144  Identities=19%  Similarity=0.221  Sum_probs=113.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++++ +||||||+|||++.++.+||+|||+++.....   ........||+.|+|||++.+..+    
T Consensus       103 qi~--~aL~~LH~~~i-vHrDikp~NIll~~~~~~kL~DfG~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~----  172 (328)
T cd05593         103 EIV--SALDYLHSGKI-VYRDLKLENLMLDKDGHIKITDFGLCKEGITD---AATMKTFCGTPEYLAPEVLEDNDY----  172 (328)
T ss_pred             HHH--HHHHHHHhCCe-EecccCHHHeEECCCCcEEEecCcCCccCCCc---ccccccccCCcCccChhhhcCCCC----
Confidence            777  99999999999 99999999999999999999999998753211   111234578999999999988766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----ChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~  293 (413)
                      +.++|||||||++|+|++|..||.+..............     ..++..+++++.+++.+||..||.+||     ++.+
T Consensus       173 ~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~-----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~  247 (328)
T cd05593         173 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED-----IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKE  247 (328)
T ss_pred             CccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC-----ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHH
Confidence            899999999999999999999997654322211111111     123356889999999999999999997     7888


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++++
T Consensus       248 il~h  251 (328)
T cd05593         248 IMRH  251 (328)
T ss_pred             HhcC
Confidence            8755

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.94  E-value=5.2e-27  Score=220.34  Aligned_cols=162  Identities=19%  Similarity=0.261  Sum_probs=113.4

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEE----cCCeEEEEeccccccccccccCCCcccccccCcccc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVV----TSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      ...+..++.  ||+  .||.|||++++ +||||||+|||+    +.++.+||+|||+++................||+.|
T Consensus       107 ~~~~~~i~~--qi~--~aL~~lH~~~i-vH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y  181 (317)
T cd07867         107 RSMVKSLLY--QIL--DGIHYLHANWV-LHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY  181 (317)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCE-EcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccc
Confidence            334445555  788  99999999999 999999999999    456799999999998764332222223345688999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC------------------------CCCCC--
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE------------------------DCEEP--  257 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~------------------------~~~~~--  257 (413)
                      +|||++.+...   ++.++|||||||++|||++|..||...........                        .....  
T Consensus       182 ~aPE~~~~~~~---~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (317)
T cd07867         182 RAPELLLGARH---YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEY  258 (317)
T ss_pred             cCcHHhcCCCc---cCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccc
Confidence            99999876432   28899999999999999999999964321100000                        00000  


Q ss_pred             ------CC------CC----cccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        258 ------FR------PN----LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       258 ------~~------~~----~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                            ..      +.    ........+..+.+|+.+||..||.+|||+.+++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h  314 (317)
T cd07867         259 PTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD  314 (317)
T ss_pred             hhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence                  00      00    000011235678899999999999999999999753

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.94  E-value=3.8e-27  Score=216.97  Aligned_cols=149  Identities=26%  Similarity=0.459  Sum_probs=114.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||+.++ +||||||+||++++++.+||+|||+++......... ......+++.|+|||.+.+..+    
T Consensus       127 ~l~--~~l~~lH~~~~-vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~----  198 (277)
T cd05062         127 EIA--DGMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-KGGKGLLPVRWMSPESLKDGVF----  198 (277)
T ss_pred             HHH--HHHHHHHHCCc-ccCCcchheEEEcCCCCEEECCCCCccccCCcceee-cCCCCccCHhhcChhHhhcCCc----
Confidence            677  99999999999 999999999999999999999999987543221111 1112345678999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++|||++ |..||.+............... +   ..+..+++.+.+++.+||+.+|++|||+.+++..
T Consensus       199 ~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         199 TTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL-L---DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc-C---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            899999999999999999 7889876442221111111111 1   1235678899999999999999999999999988


Q ss_pred             HH
Q psy16840        298 LK  299 (413)
Q Consensus       298 l~  299 (413)
                      |+
T Consensus       275 l~  276 (277)
T cd05062         275 IK  276 (277)
T ss_pred             hh
Confidence            75

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=5.3e-27  Score=214.04  Aligned_cols=155  Identities=26%  Similarity=0.445  Sum_probs=117.0

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||.|||++|+ +||||||+||+++.++.+||+|||+++........  .......+..|+|||.+.
T Consensus       105 ~~~~~~--~i~--~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~  177 (261)
T cd05068         105 LIDMAA--QVA--SGMAYLEAQNY-IHRDLAARNVLVGENNICKVADFGLARVIKEDIYE--AREGAKFPIKWTAPEAAL  177 (261)
T ss_pred             HHHHHH--HHH--HHHHHHHhCCe-eeccCCcceEEEcCCCCEEECCcceEEEccCCccc--ccCCCcCceeccCccccc
Confidence            334444  777  99999999999 99999999999999999999999998876422111  111122345799999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +...    +.++||||||+++|++++ |+.||.+........... ......   .+..++..+.+++.+||+.+|.+||
T Consensus       178 ~~~~----~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rp  249 (261)
T cd05068         178 YNRF----SIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVD-QGYRMP---CPPGCPKELYDIMLDCWKEDPDDRP  249 (261)
T ss_pred             cCCC----CchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCC---CCCcCCHHHHHHHHHHhhcCcccCC
Confidence            7766    899999999999999999 999997654222111111 111111   1246788999999999999999999


Q ss_pred             ChhHHHHHHHh
Q psy16840        290 DFPTIRARLKH  300 (413)
Q Consensus       290 s~~~i~~~l~~  300 (413)
                      ++.++...|+.
T Consensus       250 ~~~~l~~~l~~  260 (261)
T cd05068         250 TFETLQWKLED  260 (261)
T ss_pred             CHHHHHHHHhc
Confidence            99999998875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.94  E-value=3.4e-27  Score=216.05  Aligned_cols=150  Identities=23%  Similarity=0.416  Sum_probs=114.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++++ +||||||+|||++.++.+|++|||.+.......  ........++..|+|||.+.+..+    
T Consensus       115 ~i~--~al~~lH~~~i-iH~dikp~nili~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~----  185 (266)
T cd05064         115 GLA--SGMKYLSEMGY-VHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA--IYTTMSGKSPVLWAAPEAIQYHHF----  185 (266)
T ss_pred             HHH--HHHHHHHHCCE-eeccccHhhEEEcCCCcEEECCCcccccccccc--hhcccCCCCceeecCHHHHhhCCc----
Confidence            666  99999999999 999999999999999999999999865432111  111112334678999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++||+++ |..||.+.......... .....+.   .+..++..+.+++.+||+.+|.+||++.+|.+.
T Consensus       186 ~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~  261 (266)
T cd05064         186 SSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAV-EDGFRLP---APRNCPNLLHQLMLDCWQKERGERPRFSQIHSI  261 (266)
T ss_pred             cchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH-HCCCCCC---CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHH
Confidence            899999999999999775 99999765432211111 1111211   235688999999999999999999999999998


Q ss_pred             HHhh
Q psy16840        298 LKHM  301 (413)
Q Consensus       298 l~~~  301 (413)
                      |.++
T Consensus       262 l~~~  265 (266)
T cd05064         262 LSKM  265 (266)
T ss_pred             HHhh
Confidence            8754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.94  E-value=7e-27  Score=218.22  Aligned_cols=163  Identities=26%  Similarity=0.399  Sum_probs=122.5

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..+..++.  ||+  .||.|||++|+ +||||||+||+++.++.+||+|||+++........ .......+++.|+||
T Consensus       135 ~~~~~~~~~~--qi~--~al~~LH~~gi-vH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~-~~~~~~~~~~~y~aP  208 (304)
T cd05101         135 TFKDLVSCTY--QVA--RGMEYLASQKC-IHRDLAARNVLVTENNVMKIADFGLARDVNNIDYY-KKTTNGRLPVKWMAP  208 (304)
T ss_pred             cHHHHHHHHH--HHH--HHHHHHHHCCe-eecccccceEEEcCCCcEEECCCccceeccccccc-ccccCCCCCceeeCc
Confidence            3333444555  777  99999999999 99999999999999999999999998765332211 111223456789999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |++.+..+    +.++||||||+++|++++ |..||.+.+........ ....++.   .+..++..+.+++.+||..+|
T Consensus       209 E~~~~~~~----~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~li~~cl~~~p  280 (304)
T cd05101         209 EALFDRVY----THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHRMD---KPANCTNELYMMMRDCWHAIP  280 (304)
T ss_pred             hhhccCCC----CchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-HcCCcCC---CCCCCCHHHHHHHHHHcccCh
Confidence            99987766    899999999999999998 78888765432222111 1111111   235678899999999999999


Q ss_pred             CCCCChhHHHHHHHhhcc
Q psy16840        286 ESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~~  303 (413)
                      .+|||+.++++.|+++..
T Consensus       281 ~~Rps~~e~l~~l~~~~~  298 (304)
T cd05101         281 SHRPTFKQLVEDLDRILT  298 (304)
T ss_pred             hhCCCHHHHHHHHHHHHH
Confidence            999999999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=4e-27  Score=214.95  Aligned_cols=154  Identities=18%  Similarity=0.305  Sum_probs=117.4

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ..++.  |++  .||.|||+.|+ +||||+|+||+++.++.++|+|||+++................++..|+|||.+.+
T Consensus       107 ~~~~~--~l~--~~l~~lH~~~i-~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  181 (263)
T cd06625         107 RKYTR--QIL--EGVEYLHSNMI-VHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISG  181 (263)
T ss_pred             HHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceecc
Confidence            34444  777  99999999999 99999999999999999999999998765322211111123457889999999988


Q ss_pred             CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        212 THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       212 ~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      ...    +.++||||||+++|++++|+.||..................   ...+..+++.+.+++.+||..+|.+|||+
T Consensus       182 ~~~----~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  254 (263)
T cd06625         182 EGY----GRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN---PQLPSHVSPDARNFLRRTFVENAKKRPSA  254 (263)
T ss_pred             CCC----CchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC---CCCCccCCHHHHHHHHHHhhcCcccCCCH
Confidence            776    89999999999999999999999764322211111111111   22345688899999999999999999999


Q ss_pred             hHHHHH
Q psy16840        292 PTIRAR  297 (413)
Q Consensus       292 ~~i~~~  297 (413)
                      .+++..
T Consensus       255 ~~ll~~  260 (263)
T cd06625         255 EELLRH  260 (263)
T ss_pred             HHHhhC
Confidence            999865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=7.6e-27  Score=224.79  Aligned_cols=156  Identities=15%  Similarity=0.125  Sum_probs=113.6

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++......  ........||+.|+|||++.
T Consensus       184 ~~~i~~--qi~--~aL~ylH~~~I-vHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~--~~~~~~~~gt~~y~aPE~~~  256 (391)
T PHA03212        184 ILAIER--SVL--RAIQYLHENRI-IHRDIKAENIFINHPGDVCLGDFGAACFPVDIN--ANKYYGWAGTIATNAPELLA  256 (391)
T ss_pred             HHHHHH--HHH--HHHHHHHhCCc-ccCCCChHhEEEcCCCCEEEEeCCccccccccc--ccccccccCccCCCChhhhc
Confidence            344455  788  99999999999 999999999999999999999999986532211  11123457899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC------------------C--------------------
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG------------------E--------------------  252 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~------------------~--------------------  252 (413)
                      +..+    +.++|||||||++|||++|..||..........                  .                    
T Consensus       257 ~~~~----~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  332 (391)
T PHA03212        257 RDPY----GPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKS  332 (391)
T ss_pred             CCCC----CcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhcc
Confidence            8766    899999999999999999998865322110000                  0                    


Q ss_pred             CCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        253 DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ......++.... ....+.++.+||.+||+.||.+|||+.++++.-
T Consensus       333 ~~~~~~~~~~~~-~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp  377 (391)
T PHA03212        333 SRKPGSRPLWTN-LYELPIDLEYLICKMLAFDAHHRPSAEALLDFA  377 (391)
T ss_pred             CCCCCCCCCHHH-HhhhhhhHHHHHHHHhcCChhhCCCHHHHhcCh
Confidence            000000111000 123567899999999999999999999998653

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.94  E-value=6.1e-27  Score=214.92  Aligned_cols=151  Identities=27%  Similarity=0.410  Sum_probs=116.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||++++ +||||||+||++++++.+||+|||+++......... ......++..|+|||.+.+..+    
T Consensus       121 ~i~--~aL~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~----  192 (273)
T cd05035         121 DIA--LGMEYLSNRNF-IHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYR-QGRIAKMPVKWIAIESLADRVY----  192 (273)
T ss_pred             HHH--HHHHHHHhCCe-eccccchheEEECCCCeEEECCccceeecccccccc-ccccccCCccccCHhhcccCCC----
Confidence            777  99999999999 999999999999999999999999987653322111 1112234678999999877766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++|||++ |..||.+............ ...+   ..+..+++.+.+++.+||+.||.+|||+.+++..
T Consensus       193 ~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         193 TSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRH-GNRL---KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCC---CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            899999999999999999 8899876443221111111 1111   1235688899999999999999999999999999


Q ss_pred             HHhh
Q psy16840        298 LKHM  301 (413)
Q Consensus       298 l~~~  301 (413)
                      |+.+
T Consensus       269 l~~~  272 (273)
T cd05035         269 LENI  272 (273)
T ss_pred             HHhh
Confidence            8765

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG4645|consensus

Probab=99.94  E-value=2.3e-27  Score=240.19  Aligned_cols=163  Identities=14%  Similarity=0.233  Sum_probs=125.7

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC-CcccccccCccccc
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSLLWK  204 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~  204 (413)
                      .+.+....+..  |++  .|++|||++|| |||||||.|||++.+|.+|++|||.|..+.+.... ........||+.||
T Consensus      1331 ~dE~vt~vyt~--qll--~gla~LH~~gI-VHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YM 1405 (1509)
T KOG4645|consen 1331 EDEMVTRVYTK--QLL--EGLAYLHEHGI-VHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYM 1405 (1509)
T ss_pred             hhhhHHHHHHH--HHH--HHHHHHHhcCc-eecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhc
Confidence            34443333444  777  99999999999 99999999999999999999999999877554211 12234678999999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      |||++.+..... ...++||||+|||+.||+||+.||......-........+-.|..   |..++++-++++..||..|
T Consensus      1406 APEvit~t~~kG-~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~---P~~ls~~g~dFle~Cl~~d 1481 (1509)
T KOG4645|consen 1406 APEVITGTKGKG-HGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQI---PERLSSEGRDFLEHCLEQD 1481 (1509)
T ss_pred             CchhhcccccCC-CCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCC---chhhhHhHHHHHHHHHhcC
Confidence            999998765321 267899999999999999999999875543333333333444444   4569999999999999999


Q ss_pred             CCCCCChhHHHHH
Q psy16840        285 PESRPDFPTIRAR  297 (413)
Q Consensus       285 P~~Rps~~~i~~~  297 (413)
                      |..|.++.|+++.
T Consensus      1482 P~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1482 PKMRWTASQLLEH 1494 (1509)
T ss_pred             chhhhHHHHHHHh
Confidence            9999988877654

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=2.7e-27  Score=233.99  Aligned_cols=152  Identities=19%  Similarity=0.265  Sum_probs=117.7

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++++ +||||||+|||++.++.+||+|||+++....... .......+||+.|+|||++.
T Consensus       171 ~~~i~~--qi~--~aL~~lH~~~i-vHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~  244 (478)
T PTZ00267        171 VGLLFY--QIV--LALDEVHSRKM-MHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS-LDVASSFCGTPYYLAPELWE  244 (478)
T ss_pred             HHHHHH--HHH--HHHHHHHhCCE-EECCcCHHhEEECCCCcEEEEeCcCceecCCccc-cccccccCCCccccCHhHhC
Confidence            334444  888  99999999999 9999999999999999999999999986543211 11233457899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +..+    +.++|||||||++|+|++|..||.+.+..............    ..+..+++++.++|.+||..||++||+
T Consensus       245 ~~~~----~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~----~~~~~~s~~~~~li~~~L~~dP~~Rps  316 (478)
T PTZ00267        245 RKRY----SKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD----PFPCPVSSGMKALLDPLLSKNPALRPT  316 (478)
T ss_pred             CCCC----CcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC----CCCccCCHHHHHHHHHHhccChhhCcC
Confidence            8766    89999999999999999999999764422211111111111    123467889999999999999999999


Q ss_pred             hhHHHH
Q psy16840        291 FPTIRA  296 (413)
Q Consensus       291 ~~~i~~  296 (413)
                      +.+++.
T Consensus       317 ~~~~l~  322 (478)
T PTZ00267        317 TQQLLH  322 (478)
T ss_pred             HHHHHh
Confidence            999875

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.94  E-value=3.8e-27  Score=214.35  Aligned_cols=146  Identities=29%  Similarity=0.556  Sum_probs=113.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++|+ +||||||+||+++.++.+||+|||+++......      ....++..|+|||++.+..+    
T Consensus       110 ~i~--~~l~~lH~~~i-~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~----  176 (256)
T cd05082         110 DVC--EAMEYLEANNF-VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ------DTGKLPVKWTAPEALREKKF----  176 (256)
T ss_pred             HHH--HHHHHHHhCCE-eccccchheEEEcCCCcEEecCCccceeccccC------CCCccceeecCHHHHccCCC----
Confidence            666  99999999999 999999999999999999999999987542211      12234567999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++|+|++ |..||............ .....+   ..++.+++.+.+++.+||+.+|++|||+.++++.
T Consensus       177 ~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~  252 (256)
T cd05082         177 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-EKGYKM---DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQ  252 (256)
T ss_pred             CchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-hcCCCC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            889999999999999997 99998754322211111 111111   1235688999999999999999999999999998


Q ss_pred             HHhh
Q psy16840        298 LKHM  301 (413)
Q Consensus       298 l~~~  301 (413)
                      |+.+
T Consensus       253 l~~~  256 (256)
T cd05082         253 LEHI  256 (256)
T ss_pred             HhcC
Confidence            8753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.94  E-value=3.6e-27  Score=216.14  Aligned_cols=156  Identities=22%  Similarity=0.353  Sum_probs=111.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCC---C
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA---P  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~  215 (413)
                      ||+  .||+|||++++ +||||||+|||++.++.+||+|||++......... .......+++.|+|||++.....   .
T Consensus       108 qi~--~~l~~lH~~~i-vH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~  183 (269)
T cd05042         108 EVA--SGLLWLHQADF-IHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY-ITKDCHAVPLRWLAPELVEIRGQDLLP  183 (269)
T ss_pred             HHH--HHHHHHHhcCE-ecccccHhheEecCCCcEEEeccccccccccchhe-eccCCCCCcccccCHHHHhhccccccc
Confidence            666  99999999999 99999999999999999999999998653221111 11123345678999999764221   1


Q ss_pred             CCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCC-CCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhH
Q psy16840        216 IRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGE-DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPT  293 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~  293 (413)
                      ..++.++|||||||++|||++ |..||......+.... ..........+..+..+++.+.+++..|| .||++|||+++
T Consensus       184 ~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~  262 (269)
T cd05042         184 KDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEE  262 (269)
T ss_pred             cccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHH
Confidence            234889999999999999999 7888876432211111 11111122222334568889999999999 59999999999


Q ss_pred             HHHHHH
Q psy16840        294 IRARLK  299 (413)
Q Consensus       294 i~~~l~  299 (413)
                      |++.|.
T Consensus       263 v~~~l~  268 (269)
T cd05042         263 VHELLT  268 (269)
T ss_pred             HHHHhc
Confidence            998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.3e-27  Score=221.62  Aligned_cols=141  Identities=13%  Similarity=0.200  Sum_probs=112.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....      .....|++.|+|||++.+..+    
T Consensus       109 qi~--~~l~~lH~~~i-~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~----  175 (291)
T cd05612         109 EIV--CALEYLHSKEI-VYRDLKPENILLDKEGHIKLTDFGFAKKLRDR------TWTLCGTPEYLAPEVIQSKGH----  175 (291)
T ss_pred             HHH--HHHHHHHHCCe-eecCCCHHHeEECCCCCEEEEecCcchhccCC------cccccCChhhcCHHHHcCCCC----
Confidence            777  99999999999 99999999999999999999999998765321      223468999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC-----hhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD-----FPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps-----~~~  293 (413)
                      +.++|||||||++|+|++|..||.+.........+....  +   .++..+++.+.+++.+||+.||.+||+     +++
T Consensus       176 ~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~--~---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~  250 (291)
T cd05612         176 NKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGK--L---EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADD  250 (291)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--c---CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHH
Confidence            899999999999999999999997654222111111111  1   123456889999999999999999995     777


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++.+
T Consensus       251 ~l~h  254 (291)
T cd05612         251 VKNH  254 (291)
T ss_pred             HhcC
Confidence            7654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.94  E-value=5.3e-27  Score=214.89  Aligned_cols=152  Identities=24%  Similarity=0.390  Sum_probs=114.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||+.|+ +||||||+||+++.++.+||+|||++..................+..|+|||++.+..+    
T Consensus       115 ~l~--~al~~lH~~~i-~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~----  187 (268)
T cd05063         115 GIA--AGMKYLSDMNY-VHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKF----  187 (268)
T ss_pred             HHH--HHHHHHHHCCe-eccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCc----
Confidence            666  99999999999 99999999999999999999999998765432221111112223457999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++||+++ |..||...........+.. ..+.+   .+..++..+.+++.+||+.+|++||++.++++.
T Consensus       188 ~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~-~~~~~---~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~  263 (268)
T cd05063         188 TSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIND-GFRLP---APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNL  263 (268)
T ss_pred             ChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhc-CCCCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            899999999999999997 9999965442221111111 11111   124578899999999999999999999999999


Q ss_pred             HHhh
Q psy16840        298 LKHM  301 (413)
Q Consensus       298 l~~~  301 (413)
                      |+++
T Consensus       264 l~~~  267 (268)
T cd05063         264 LDKL  267 (268)
T ss_pred             HHhh
Confidence            8764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.94  E-value=9.3e-27  Score=215.57  Aligned_cols=154  Identities=23%  Similarity=0.308  Sum_probs=114.9

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.......    ......|+..|+|||++.
T Consensus       110 ~~~~~~--qi~--~al~~lH~~~i-vH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~  180 (288)
T cd07863         110 IKDLMR--QFL--RGLDFLHANCI-VHRDLKPENILVTSGGQVKLADFGLARIYSCQM----ALTPVVVTLWYRAPEVLL  180 (288)
T ss_pred             HHHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEECCCCCEEECccCccccccCcc----cCCCccccccccCchHhh
Confidence            334444  777  99999999999 999999999999999999999999987653221    122346789999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC----------------------CCCCCCCCCcccccCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE----------------------DCEEPFRPNLELLRDS  268 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~  268 (413)
                      +..+    +.++|||||||++|+|++|.+||.+.........                      ..............+.
T Consensus       181 ~~~~----~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (288)
T cd07863         181 QSTY----ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPE  256 (288)
T ss_pred             CCCC----CCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcC
Confidence            7766    8999999999999999999999965432110000                      0000000111122245


Q ss_pred             ChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        269 CEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       269 ~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ++..+.+++.+||+.||++|||+.+++..
T Consensus       257 ~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         257 IEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             cCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            77889999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0589|consensus

Probab=99.94  E-value=8.1e-28  Score=224.19  Aligned_cols=145  Identities=19%  Similarity=0.307  Sum_probs=125.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .|+.|||++.| +|||||+.|||++.++.+||+|||+|+......   ....+..||+.|++||++.+.+|    
T Consensus       114 Q~~--~av~ylH~~~i-LHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~---~~a~tvvGTp~YmcPEil~d~pY----  183 (426)
T KOG0589|consen  114 QIL--LAVNYLHENRV-LHRDLKCANIFLTKDKKVKLGDFGLAKILNPED---SLASTVVGTPYYMCPEILSDIPY----  183 (426)
T ss_pred             HHH--HHHHHHHhhhh-hcccchhhhhhccccCceeecchhhhhhcCCch---hhhheecCCCcccCHHHhCCCCC----
Confidence            777  99999999998 999999999999999999999999999876443   12456789999999999999988    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ..|+|||||||++|||++-+++|.+.+.......+......|    ++...+.+++.+|..|+..+|..||++.+++..
T Consensus       184 n~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~P----lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  184 NEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSP----LPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             CccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCC----CCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            999999999999999999999999877555555444444333    346789999999999999999999999999865

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.94  E-value=3.7e-27  Score=217.41  Aligned_cols=153  Identities=24%  Similarity=0.454  Sum_probs=117.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++++ +||||||+||++++++.+||+|||+++.+........ .....++..|+|||++.+..+    
T Consensus       125 ~i~--~~l~~LH~~~i-~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~-~~~~~~~~~y~apE~~~~~~~----  196 (280)
T cd05043         125 QIA--CGMSYLHKRGV-IHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCL-GDNENRPVKWMALESLVNKEY----  196 (280)
T ss_pred             HHH--HHHHHHHHCCE-eecccCHhhEEEcCCCcEEECCCCCcccccCCceEEe-CCCCCcchhccCHHHHhcCCC----
Confidence            666  99999999999 9999999999999999999999999876533221111 122345678999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++||+++ |..||........... .....++..   +..+++++.+++.+||..+|++|||+.+++..
T Consensus       197 ~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~  272 (280)
T cd05043         197 SSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAY-LKDGYRLAQ---PINCPDELFAVMACCWALDPEERPSFSQLVQC  272 (280)
T ss_pred             CchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHH-HHcCCCCCC---CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            899999999999999998 9999976432221111 111122211   24578899999999999999999999999999


Q ss_pred             HHhhcc
Q psy16840        298 LKHMKD  303 (413)
Q Consensus       298 l~~~~~  303 (413)
                      |+.+..
T Consensus       273 l~~~~~  278 (280)
T cd05043         273 LTDFHA  278 (280)
T ss_pred             HHHHHh
Confidence            987754

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.94  E-value=9.3e-27  Score=222.51  Aligned_cols=156  Identities=21%  Similarity=0.281  Sum_probs=115.4

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....    .......||+.|+|||++.
T Consensus       125 ~~~~~~--qi~--~~L~~LH~~~i-vHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~~t~~y~aPE~~~  195 (359)
T cd07876         125 MSYLLY--QML--CGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTACTN----FMMTPYVVTRYYRAPEVIL  195 (359)
T ss_pred             HHHHHH--HHH--HHHHHHHhCCc-ccCCCCHHHEEECCCCCEEEecCCCccccccC----ccCCCCcccCCCCCchhcc
Confidence            334445  888  99999999999 99999999999999999999999998754221    1123456789999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-----------------------CCCCC---------
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED-----------------------CEEPF---------  258 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~-----------------------~~~~~---------  258 (413)
                      +..+    +.++|||||||++|+|++|..||.+..........                       ...+.         
T Consensus       196 ~~~~----~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (359)
T cd07876         196 GMGY----KENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEEL  271 (359)
T ss_pred             CCCC----CcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhh
Confidence            8776    88999999999999999999999764321100000                       00000         


Q ss_pred             -----CCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHH
Q psy16840        259 -----RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK  299 (413)
Q Consensus       259 -----~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~  299 (413)
                           .+.........++.+.+|+.+||..||++|||+.+++.+..
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~  317 (359)
T cd07876         272 FPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY  317 (359)
T ss_pred             ccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence                 00000111234678999999999999999999999988643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG4717|consensus

Probab=99.94  E-value=1.3e-26  Score=214.43  Aligned_cols=146  Identities=18%  Similarity=0.288  Sum_probs=121.9

Q ss_pred             ccCCchHHhhHhhhcCCCcccCCCCCCCeEEc-CCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCC
Q psy16840        137 FGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVT-SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAP  215 (413)
Q Consensus       137 ~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  215 (413)
                      |+||+  .|+.|+|+-.+ |||||||+||.+- .-|.|||.|||++..+....    ...+.||++.|-|||++.+..|.
T Consensus       124 F~QI~--~AI~YCHqLHV-VHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~----kL~TsCGSLAYSAPEILLGDsYD  196 (864)
T KOG4717|consen  124 FAQIV--HAISYCHQLHV-VHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK----KLTTSCGSLAYSAPEILLGDSYD  196 (864)
T ss_pred             HHHHH--HHHHHHhhhhh-hcccCCcceeEEeeecCceEeeeccccccCCCcc----hhhcccchhhccCchhhhcCccC
Confidence            44888  99999999999 9999999998664 56899999999986553322    24567999999999999999885


Q ss_pred             CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        216 IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                         .+++||||||||||-+.+|++||...+..+..-.+....+.     +|..++.+.++||..||..||.+|.+.++|.
T Consensus       197 ---APAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYt-----vPshvS~eCrdLI~sMLvRdPkkRAslEeI~  268 (864)
T KOG4717|consen  197 ---APAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYT-----VPSHVSKECRDLIQSMLVRDPKKRASLEEIV  268 (864)
T ss_pred             ---CcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccccc-----CchhhhHHHHHHHHHHHhcCchhhccHHHHh
Confidence               78999999999999999999999877655555444433332     3467889999999999999999999999998


Q ss_pred             HH
Q psy16840        296 AR  297 (413)
Q Consensus       296 ~~  297 (413)
                      ..
T Consensus       269 s~  270 (864)
T KOG4717|consen  269 ST  270 (864)
T ss_pred             cc
Confidence            64

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.94  E-value=5.4e-27  Score=215.17  Aligned_cols=149  Identities=28%  Similarity=0.464  Sum_probs=113.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++|+ +||||||+|||+++++.+||+|||++.......    .......+..|+|||++.+..+    
T Consensus       120 ~i~--~al~~lH~~~i-~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~----~~~~~~~~~~y~apE~~~~~~~----  188 (270)
T cd05047         120 DVA--RGMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYV----KKTMGRLPVRWMAIESLNYSVY----  188 (270)
T ss_pred             HHH--HHHHHHHHCCE-eecccccceEEEcCCCeEEECCCCCccccchhh----hccCCCCccccCChHHHccCCC----
Confidence            677  99999999999 999999999999999999999999975321110    1111223567999999877766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|||++ |..||.+.......... ....+..   .+..++.++.+++.+||..+|.+|||+.+++..
T Consensus       189 ~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  264 (270)
T cd05047         189 TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-PQGYRLE---KPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  264 (270)
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHH-hCCCCCC---CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            899999999999999997 99999764322111111 1111111   124577899999999999999999999999999


Q ss_pred             HHhhc
Q psy16840        298 LKHMK  302 (413)
Q Consensus       298 l~~~~  302 (413)
                      |..+.
T Consensus       265 l~~~~  269 (270)
T cd05047         265 LNRML  269 (270)
T ss_pred             HHHhh
Confidence            88764

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG2345|consensus

Probab=99.94  E-value=9.4e-27  Score=197.18  Aligned_cols=161  Identities=16%  Similarity=0.225  Sum_probs=115.5

Q ss_pred             HhhhccccCCchHHhhHhhhcCC--CcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCc------ccccccCccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSP--IGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI------GEHQYYRSLL  202 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~--iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~------~~~~~~gt~~  202 (413)
                      +..++.  +|+  +||.+||+..  + .||||||.|||+++++.++|.|||.+......-....      .......|..
T Consensus       129 iL~if~--gic--~gL~~lH~~~~~y-AH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~p  203 (302)
T KOG2345|consen  129 ILWIFL--GIC--RGLEALHEKEPPY-AHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIP  203 (302)
T ss_pred             HHHHHH--HHH--HHHHHHhccCCcc-cccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCc
Confidence            334444  777  9999999877  7 9999999999999999999999999765432211111      0112245889


Q ss_pred             ccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCC--CCCCCCCC-CCCCCCcccccCCChHHHHHHHHH
Q psy16840        203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLY--EPKGEDCE-EPFRPNLELLRDSCEPFVLACMRD  279 (413)
Q Consensus       203 y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~  279 (413)
                      |.|||.+.-.... ..+.++|||||||++|+|+.|..||...-..  .....+.. ...-|..    ..+++.+.++|+.
T Consensus       204 yRAPELf~vk~~~-ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~----~~yse~l~~lik~  278 (302)
T KOG2345|consen  204 YRAPELFNVKSHC-TITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNS----SRYSEALHQLIKS  278 (302)
T ss_pred             ccCchheecccCc-ccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCC----CCccHHHHHHHHH
Confidence            9999998755432 3389999999999999999999999532110  00001111 1111111    3488999999999


Q ss_pred             HhccCCCCCCChhHHHHHHHhh
Q psy16840        280 CWAEAPESRPDFPTIRARLKHM  301 (413)
Q Consensus       280 cl~~~P~~Rps~~~i~~~l~~~  301 (413)
                      |++.||.+||++.+++..+..+
T Consensus       279 mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  279 MLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             HhcCCcccCCCHHHHHHHHHhh
Confidence            9999999999999999887654

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.94  E-value=5.7e-27  Score=216.49  Aligned_cols=150  Identities=23%  Similarity=0.437  Sum_probs=115.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||++++ +||||||+|||++.++.+||+|||+++........ .......++..|+|||.+.+..+    
T Consensus       132 ~i~--~al~~lH~~~i-~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~----  203 (283)
T cd05090         132 QIA--AGMEYLSSHFF-VHKDLAARNILIGEQLHVKISDLGLSREIYSADYY-RVQPKSLLPIRWMPPEAIMYGKF----  203 (283)
T ss_pred             HHH--HHHHHHHhcCe-ehhccccceEEEcCCCcEEeccccccccccCCcce-ecccCCCccceecChHHhccCCC----
Confidence            777  99999999999 99999999999999999999999998765322211 11223345678999999987666    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|||++ |..||.+.+..............    ..+..+++.+.+++.+||+.||.+||++.++.+.
T Consensus       204 ~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         204 SSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLL----PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             CchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC----CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            899999999999999998 99999764322111111111111    1235678999999999999999999999999988


Q ss_pred             HHh
Q psy16840        298 LKH  300 (413)
Q Consensus       298 l~~  300 (413)
                      |..
T Consensus       280 l~~  282 (283)
T cd05090         280 LRS  282 (283)
T ss_pred             hhc
Confidence            764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.94  E-value=1.9e-27  Score=223.86  Aligned_cols=144  Identities=17%  Similarity=0.237  Sum_probs=112.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+..+    
T Consensus       103 qi~--~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  172 (323)
T cd05595         103 EIV--SALEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKTFCGTPEYLAPEVLEDNDY----  172 (323)
T ss_pred             HHH--HHHHHHHHCCe-EecCCCHHHEEEcCCCCEEecccHHhccccCCC---CccccccCCcCcCCcccccCCCC----
Confidence            777  99999999999 999999999999999999999999986532111   11234568999999999988766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----ChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~  293 (413)
                      +.++|||||||++|||++|..||...+.............     .++..+++++.+++.+||..||.+||     ++.+
T Consensus       173 ~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~  247 (323)
T cd05595         173 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKE  247 (323)
T ss_pred             CchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-----CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHH
Confidence            8999999999999999999999976442221111111111     12356789999999999999999998     7777


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      +++.
T Consensus       248 ~l~h  251 (323)
T cd05595         248 VMEH  251 (323)
T ss_pred             HHcC
Confidence            7654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.94  E-value=3e-27  Score=217.67  Aligned_cols=149  Identities=18%  Similarity=0.176  Sum_probs=112.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||+.|+ +||||||+||+++.++.+||+|||++.......    ......|+..|+|||++.+..+    
T Consensus       103 qi~--~al~~lH~~~i-vH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~----  171 (277)
T cd05607         103 QIT--CGILHLHSMDI-VYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK----TITQRAGTNGYMAPEILKEEPY----  171 (277)
T ss_pred             HHH--HHHHHHHHCCE-EEccCChHhEEEcCCCCEEEeeceeeeecCCCc----eeeccCCCCCccCHHHHccCCC----
Confidence            777  99999999999 999999999999999999999999987653221    1223467899999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      +.++|||||||++|||++|..||...........................+++++.+++.+||+.||.+||++.++++.+
T Consensus       172 ~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~  251 (277)
T cd05607         172 SYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDP  251 (277)
T ss_pred             CCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence            89999999999999999999999753311110000000111111111245788999999999999999999998766443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.94  E-value=7.9e-27  Score=224.90  Aligned_cols=165  Identities=22%  Similarity=0.381  Sum_probs=124.0

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +.+..+..++.  ||+  .||+|||+.++ +||||||+|||++.++.+||+|||+++....... ........++..|+|
T Consensus       234 l~~~~~~~~~~--qi~--~aL~~LH~~~i-vH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~-~~~~~~~~~~~~y~a  307 (400)
T cd05105         234 LTTLDLLSFTY--QVA--RGMEFLASKNC-VHRDLAARNVLLAQGKIVKICDFGLARDIMHDSN-YVSKGSTFLPVKWMA  307 (400)
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHhCCe-eCCCCChHhEEEeCCCEEEEEeCCcceecccccc-ccccCCcCCCcceEC
Confidence            34444455555  788  99999999999 9999999999999999999999999876532221 111223456788999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||.+.+..+    +.++|||||||++|||++ |..||.................++.   .+..+++++.+++.+||+.|
T Consensus       308 PE~~~~~~~----~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~d  380 (400)
T cd05105         308 PESIFDNLY----TTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMA---KPDHATQEVYDIMVKCWNSE  380 (400)
T ss_pred             hhhhcCCCC----CchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCC---CCccCCHHHHHHHHHHCccC
Confidence            999987766    899999999999999997 8999876432211111111122222   22567889999999999999


Q ss_pred             CCCCCChhHHHHHHHhhcc
Q psy16840        285 PESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~~  303 (413)
                      |++||++.++.+.|+.+..
T Consensus       381 P~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         381 PEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             HhHCcCHHHHHHHHHHHcC
Confidence            9999999999999987643

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.94  E-value=7.1e-27  Score=213.81  Aligned_cols=151  Identities=25%  Similarity=0.418  Sum_probs=115.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++++ +||||||+|||+++++.+||+|||++......... .......+++.|+|||.+.+..+    
T Consensus       114 ~l~--~~l~~Lh~~~i-~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~----  185 (266)
T cd05033         114 GIA--SGMKYLSEMNY-VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT-YTTKGGKIPIRWTAPEAIAYRKF----  185 (266)
T ss_pred             HHH--HHHHHHHhCCc-ccCCCCcceEEEcCCCCEEECccchhhcccccccc-eeccCCCCCccccChhhhccCCC----
Confidence            677  99999999999 99999999999999999999999999876421111 11112234678999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++ |..||............. ....+.   .+..+++.+.+++.+||+.+|++||++.++++.
T Consensus       186 ~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         186 TSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVE-DGYRLP---PPMDCPSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             ccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH-cCCCCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            899999999999999998 999986543221111111 111111   124678899999999999999999999999999


Q ss_pred             HHhh
Q psy16840        298 LKHM  301 (413)
Q Consensus       298 l~~~  301 (413)
                      |.++
T Consensus       262 l~~~  265 (266)
T cd05033         262 LDKM  265 (266)
T ss_pred             HHhh
Confidence            8764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.94  E-value=4.2e-27  Score=217.10  Aligned_cols=148  Identities=24%  Similarity=0.316  Sum_probs=111.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++++ +||||||+||+++.++.+||+|||++........   ......||+.|+|||++.+..+    
T Consensus       105 qi~--~~l~~lH~~~i-~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~----  174 (280)
T cd05608         105 QII--SGLEHLHQRRI-IYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS---KTKGYAGTPGFMAPELLQGEEY----  174 (280)
T ss_pred             HHH--HHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEeeCccceecCCCCc---cccccCCCcCccCHHHhcCCCC----
Confidence            777  99999999999 9999999999999999999999999876532211   1234568999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----ChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~  293 (413)
                      +.++|||||||++|+|++|+.||................... ....+..+++.+.+++.+||+.||++||     ++++
T Consensus       175 ~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~  253 (280)
T cd05608         175 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND-SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDG  253 (280)
T ss_pred             CccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc-CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHH
Confidence            889999999999999999999997643211111000001111 1122356889999999999999999999     4555


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++++
T Consensus       254 ~l~h  257 (280)
T cd05608         254 LRTH  257 (280)
T ss_pred             HhcC
Confidence            6543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.94  E-value=1.5e-27  Score=225.54  Aligned_cols=148  Identities=19%  Similarity=0.284  Sum_probs=110.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.......  .......||+.|+|||++.+...   +
T Consensus       113 qi~--~~l~~lH~~~i-vHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~---~  184 (332)
T cd05614         113 EII--LALEHLHKLGI-VYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK--ERTYSFCGTIEYMAPEIIRGKGG---H  184 (332)
T ss_pred             HHH--HHHHHHHHCCc-EecCCCHHHeEECCCCCEEEeeCcCCccccccCC--CccccccCCccccCHHHhcCCCC---C
Confidence            777  99999999999 9999999999999999999999999875432211  12234578999999999976542   2


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC--CCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----Ch
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCE--EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DF  291 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~  291 (413)
                      +.++|||||||++|||++|..||..............  ....+   .++..+++.+.+++.+||+.||++||     ++
T Consensus       185 ~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~  261 (332)
T cd05614         185 GKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP---PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGA  261 (332)
T ss_pred             CCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCH
Confidence            7899999999999999999999975332111110000  01111   22356788999999999999999999     55


Q ss_pred             hHHHHH
Q psy16840        292 PTIRAR  297 (413)
Q Consensus       292 ~~i~~~  297 (413)
                      ++++++
T Consensus       262 ~~~l~h  267 (332)
T cd05614         262 SEIKEH  267 (332)
T ss_pred             HHHHcC
Confidence            566544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=7.7e-27  Score=225.47  Aligned_cols=159  Identities=16%  Similarity=0.155  Sum_probs=117.1

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++........ ........||+.|+|||++.
T Consensus       187 ~~~i~~--ql~--~aL~~LH~~gi-vHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~  260 (392)
T PHA03207        187 AITIQR--RLL--EALAYLHGRGI-IHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD-TPQCYGWSGTLETNSPELLA  260 (392)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCc-cccCCCHHHEEEcCCCCEEEccCccccccCcccc-cccccccccccCccCHhHhc
Confidence            334444  777  99999999999 9999999999999999999999999876533221 11223457899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-----------------C-----------CCCCCCCCCc
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----------------E-----------DCEEPFRPNL  262 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-----------------~-----------~~~~~~~~~~  262 (413)
                      +..+    +.++|||||||++|||++|..||.+........                 .           ......++..
T Consensus       261 ~~~~----~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (392)
T PHA03207        261 LDPY----CAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPY  336 (392)
T ss_pred             CCCC----CchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCc
Confidence            8776    899999999999999999999997644211000                 0           0000011111


Q ss_pred             c----cccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHH
Q psy16840        263 E----LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK  299 (413)
Q Consensus       263 ~----~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~  299 (413)
                      .    ......+.++.++|.+||..||++|||+.+++.+-.
T Consensus       337 ~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~  377 (392)
T PHA03207        337 TIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL  377 (392)
T ss_pred             cccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence            0    001245678999999999999999999999987743

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=5e-27  Score=216.05  Aligned_cols=149  Identities=28%  Similarity=0.442  Sum_probs=115.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||+.++ +||||||+||+++.++.+||+|||+++........ .......++..|+|||.+.+...    
T Consensus       127 ~i~--~~l~~lH~~~i-~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~----  198 (277)
T cd05032         127 EIA--DGMAYLAAKKF-VHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWMAPESLKDGVF----  198 (277)
T ss_pred             HHH--HHHHHHHhCCc-cccccChheEEEcCCCCEEECCcccchhhccCccc-ccCCCCCccccccCHHHHhcCCC----
Confidence            677  99999999999 99999999999999999999999998765432211 11223346788999999877666    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++||+++ |..||.+.+......... ....+   ..+..++..+.+++.+||+.+|++|||+.++++.
T Consensus       199 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~  274 (277)
T cd05032         199 TTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI-DGGHL---DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS  274 (277)
T ss_pred             CcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh-cCCCC---CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            899999999999999998 999997644222111111 11111   1235678899999999999999999999999988


Q ss_pred             HH
Q psy16840        298 LK  299 (413)
Q Consensus       298 l~  299 (413)
                      |+
T Consensus       275 l~  276 (277)
T cd05032         275 LK  276 (277)
T ss_pred             hc
Confidence            75

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2e-27  Score=224.79  Aligned_cols=146  Identities=20%  Similarity=0.204  Sum_probs=114.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.....      ......||+.|+|||++.+..+    
T Consensus       109 qi~--~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~----  175 (333)
T cd05600         109 EMF--EAVDALHELGY-IHRDLKPENFLIDASGHIKLTDFGLSKGIVT------YANSVVGSPDYMAPEVLRGKGY----  175 (333)
T ss_pred             HHH--HHHHHHHHCCc-cccCCCHHHEEECCCCCEEEEeCcCCccccc------ccCCcccCccccChhHhcCCCC----
Confidence            777  99999999999 9999999999999999999999999875432      2334578999999999988766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC---CCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC---EEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                      +.++|||||||++|||++|..||.+.+..+......   .....|........+++++.+++.+||..+|.+||++.+++
T Consensus       176 ~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll  255 (333)
T cd05600         176 DFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIK  255 (333)
T ss_pred             CCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHH
Confidence            899999999999999999999997654322111100   00111111111135688999999999999999999999998


Q ss_pred             HH
Q psy16840        296 AR  297 (413)
Q Consensus       296 ~~  297 (413)
                      .+
T Consensus       256 ~h  257 (333)
T cd05600         256 NH  257 (333)
T ss_pred             hC
Confidence            75

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.94  E-value=7.2e-27  Score=217.89  Aligned_cols=152  Identities=23%  Similarity=0.393  Sum_probs=116.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||++++ +|+||||+|||++.++.+||+|||+++....... ........++..|+|||.+.+...    
T Consensus       149 ~i~--~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~----  220 (302)
T cd05055         149 QVA--KGMAFLASKNC-IHRDLAARNVLLTHGKIVKICDFGLARDIMNDSN-YVVKGNARLPVKWMAPESIFNCVY----  220 (302)
T ss_pred             HHH--HHHHHHHHCCe-ehhhhccceEEEcCCCeEEECCCcccccccCCCc-eeecCCCCcccccCCHhhhccCCC----
Confidence            777  99999999999 9999999999999999999999999876532211 111122345678999999987776    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++|++++ |..||.+...............++.   .+...++.+.+++.+||+.+|++|||+.+++..
T Consensus       221 ~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~  297 (302)
T cd05055         221 TFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMA---QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL  297 (302)
T ss_pred             CcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            899999999999999998 9999976442221111111112221   124567899999999999999999999999999


Q ss_pred             HHhh
Q psy16840        298 LKHM  301 (413)
Q Consensus       298 l~~~  301 (413)
                      |+++
T Consensus       298 l~~~  301 (302)
T cd05055         298 IGKQ  301 (302)
T ss_pred             HHhh
Confidence            8764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.94  E-value=2.2e-27  Score=222.73  Aligned_cols=142  Identities=20%  Similarity=0.256  Sum_probs=110.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....   ........||+.|+|||++.+..+    
T Consensus       104 qi~--~~l~~lH~~~i-vHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~----  173 (316)
T cd05620         104 EIV--CGLQFLHSKGI-IYRDLKLDNVMLDRDGHIKIADFGMCKENVFG---DNRASTFCGTPDYIAPEILQGLKY----  173 (316)
T ss_pred             HHH--HHHHHHHHCCe-EecCCCHHHeEECCCCCEEeCccCCCeecccC---CCceeccCCCcCccCHHHHcCCCC----
Confidence            777  99999999999 99999999999999999999999998643211   112234578999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh-HHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP-TIR  295 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~-~i~  295 (413)
                      +.++|||||||++|||++|..||.+.+..........     ..+..+..+++++.+++.+||..||.+||++. +++
T Consensus       174 ~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         174 TFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRV-----DTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             CcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh-----CCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            8999999999999999999999976542211111110     11122345788999999999999999999984 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.94  E-value=8.7e-27  Score=212.55  Aligned_cols=149  Identities=27%  Similarity=0.460  Sum_probs=114.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      +++  .||.|||+.|+ +||||||+||++++++.+||+|||++.........  ......++..|+|||...+...    
T Consensus       110 ~l~--~al~~lH~~~i-~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~y~~Pe~~~~~~~----  180 (260)
T cd05069         110 QIA--DGMAYIERMNY-IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRF----  180 (260)
T ss_pred             HHH--HHHHHHHhCCE-eecccCcceEEEcCCCeEEECCCccceEccCCccc--ccCCCccchhhCCHHHhccCCc----
Confidence            666  99999999998 99999999999999999999999998765322111  1122345678999999887766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++ |..||.+........... ....+.   .+...+..+.+++.+||..||++||+++++++.
T Consensus       181 ~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  256 (260)
T cd05069         181 TIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVE-RGYRMP---CPQGCPESLHELMKLCWKKDPDERPTFEYIQSF  256 (260)
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCC---CCcccCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            899999999999999999 899997644222111111 111111   224678899999999999999999999999998


Q ss_pred             HHh
Q psy16840        298 LKH  300 (413)
Q Consensus       298 l~~  300 (413)
                      |+.
T Consensus       257 l~~  259 (260)
T cd05069         257 LED  259 (260)
T ss_pred             Hhc
Confidence            864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.94  E-value=6.9e-27  Score=217.00  Aligned_cols=162  Identities=29%  Similarity=0.451  Sum_probs=121.6

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +++..+..++.  ||+  .||+|||++++ +||||||+|||++.++.+||+|||+++......... ......++..|+|
T Consensus       129 l~~~~~~~i~~--qi~--~al~~LH~~~i-vH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~a  202 (293)
T cd05053         129 LTQKDLVSFAY--QVA--RGMEFLASKKC-IHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYR-KTTNGRLPVKWMA  202 (293)
T ss_pred             cCHHHHHHHHH--HHH--HHHHHHHHCCc-cccccceeeEEEcCCCeEEeCcccccccccccccee-ccCCCCCCccccC
Confidence            44444555555  788  99999999999 999999999999999999999999988654322111 1112234567999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||.+.+..+    +.++|||||||++||+++ |..||.+.......... .....+.   .+..++..+.+++.+||..+
T Consensus       203 PE~~~~~~~----~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~li~~~l~~~  274 (293)
T cd05053         203 PEALFDRVY----THQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLL-KEGYRME---KPQNCTQELYHLMRDCWHEV  274 (293)
T ss_pred             HHHhccCCc----CcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHH-HcCCcCC---CCCCCCHHHHHHHHHHcccC
Confidence            999877766    899999999999999997 99998764422211111 1111111   23467889999999999999


Q ss_pred             CCCCCChhHHHHHHHhh
Q psy16840        285 PESRPDFPTIRARLKHM  301 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~  301 (413)
                      |++|||+.++++.|+.+
T Consensus       275 p~~Rps~~eil~~l~~~  291 (293)
T cd05053         275 PSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             cccCcCHHHHHHHHHHh
Confidence            99999999999998765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.93  E-value=6.5e-27  Score=218.32  Aligned_cols=154  Identities=27%  Similarity=0.462  Sum_probs=116.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++.......    ......++..|+|||.+.+..+    
T Consensus       132 qi~--~al~~LH~~gi-~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~----  200 (303)
T cd05088         132 DVA--RGMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYV----KKTMGRLPVRWMAIESLNYSVY----  200 (303)
T ss_pred             HHH--HHHHHHHhCCc-cccccchheEEecCCCcEEeCccccCcccchhh----hcccCCCcccccCHHHHhccCC----
Confidence            777  99999999999 999999999999999999999999976421111    1111223567999999877665    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++||+++ |..||.+....+..... ....++.   .+..+++.+.+++.+||+.+|++||++.+++..
T Consensus       201 ~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         201 TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-PQGYRLE---KPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             cccccchhhhhHHHHHHhcCCCCcccCChHHHHHHH-hcCCcCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            889999999999999998 99999764422211111 1111111   124577899999999999999999999999999


Q ss_pred             HHhhcccCcc
Q psy16840        298 LKHMKDGKQK  307 (413)
Q Consensus       298 l~~~~~~~~~  307 (413)
                      |..+......
T Consensus       277 l~~~~~~~~~  286 (303)
T cd05088         277 LNRMLEERKT  286 (303)
T ss_pred             HHHHHHhhhh
Confidence            9877655543

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.93  E-value=8.4e-27  Score=216.15  Aligned_cols=164  Identities=23%  Similarity=0.376  Sum_probs=122.9

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +.+..+..++.  |++  .||.|||+.++ +||||||+|||+++++.+||+|||+++........ .......++..|+|
T Consensus       124 l~~~~~~~i~~--~i~--~~l~~LH~~~i-vH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~a  197 (290)
T cd05045         124 LTMGDLISFAW--QIS--RGMQYLAEMKL-VHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY-VKRSKGRIPVKWMA  197 (290)
T ss_pred             cCHHHHHHHHH--HHH--HHHHHHHHCCe-ehhhhhhheEEEcCCCcEEeccccccccccCccch-hcccCCCCCccccC
Confidence            33444455555  777  99999999999 99999999999999999999999998754322111 11122345678999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||.+.+..+    +.++||||||+++|+|++ |..||.+........ .......+.   .+..++.++.+++.+||+.+
T Consensus       198 pE~~~~~~~----~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~i~~cl~~~  269 (290)
T cd05045         198 IESLFDHIY----TTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN-LLKTGYRME---RPENCSEEMYNLMLTCWKQE  269 (290)
T ss_pred             HHHHccCCc----chHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-HHhCCCCCC---CCCCCCHHHHHHHHHHccCC
Confidence            999877766    899999999999999998 999997643222111 111111221   13567889999999999999


Q ss_pred             CCCCCChhHHHHHHHhhcc
Q psy16840        285 PESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~~  303 (413)
                      |.+||++.++++.|+++..
T Consensus       270 P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         270 PDKRPTFADISKELEKMMV  288 (290)
T ss_pred             cccCCCHHHHHHHHHHHHh
Confidence            9999999999999988754

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0663|consensus

Probab=99.93  E-value=3.2e-27  Score=207.98  Aligned_cols=150  Identities=19%  Similarity=0.248  Sum_probs=115.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  +|++|||.+.| +||||||+|+|++..|.+||+|||+|+.+.....   ..+..+-|.+|.|||.+.+...   |
T Consensus       185 QlL--~glk~lH~~wi-lHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k---~~T~lVVTLWYRaPELLLG~~t---y  255 (419)
T KOG0663|consen  185 QLL--RGLKHLHDNWI-LHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK---PYTPLVVTLWYRAPELLLGAKT---Y  255 (419)
T ss_pred             HHH--HHHHHHhhcee-EecccchhheeeccCCcEEecccchhhhhcCCcc---cCcceEEEeeecCHHHhcCCcc---c
Confidence            777  99999999999 9999999999999999999999999998865422   2344567999999999998764   4


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC-----------------------CCCCCCc---ccccC-CChH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCE-----------------------EPFRPNL---ELLRD-SCEP  271 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~-----------------------~~~~~~~---~~~~~-~~~~  271 (413)
                      +...|+||+|||+.|++++.+-|.+.+..+....+..                       ....|..   ..++. ..++
T Consensus       256 st~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse  335 (419)
T KOG0663|consen  256 STAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSE  335 (419)
T ss_pred             CcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccch
Confidence            9999999999999999999999988663332211100                       0000000   01111 1568


Q ss_pred             HHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        272 FVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       272 ~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .-.+|+..++..||.+|.|+.+.+++
T Consensus       336 ~g~~Lln~llt~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  336 QGFDLLNKLLTYDPGKRITAEDGLKH  361 (419)
T ss_pred             hHHHHHHHHhccCccccccHHHhhcc
Confidence            88999999999999999999999865

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.93  E-value=8.9e-27  Score=218.54  Aligned_cols=163  Identities=25%  Similarity=0.385  Sum_probs=120.8

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++......... ......++..|+||
T Consensus       132 ~~~~~~~~~~--qi~--~aL~~lH~~gi-~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aP  205 (314)
T cd05099         132 SFKDLVSCAY--QVA--RGMEYLESRRC-IHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYK-KTSNGRLPVKWMAP  205 (314)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCe-eeccccceeEEEcCCCcEEEcccccccccccccccc-ccccCCCCccccCH
Confidence            3333444444  777  99999999999 999999999999999999999999987653221111 11112334679999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |.+.+..+    +.++||||||+++|++++ |..||.+........... ....+   ..+..++.++.+++.+||..+|
T Consensus       206 E~~~~~~~----~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~l~~li~~cl~~~p  277 (314)
T cd05099         206 EALFDRVY----THQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLR-EGHRM---DKPSNCTHELYMLMRECWHAVP  277 (314)
T ss_pred             HHHccCCc----CccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCC---CCCCCCCHHHHHHHHHHcCCCc
Confidence            99987766    899999999999999999 889987644222111111 11111   1235678899999999999999


Q ss_pred             CCCCChhHHHHHHHhhcc
Q psy16840        286 ESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~~  303 (413)
                      ++|||+.++++.|+.+..
T Consensus       278 ~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         278 TQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             ccCcCHHHHHHHHHHHHH
Confidence            999999999999887653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG1006|consensus

Probab=99.93  E-value=6.2e-28  Score=206.23  Aligned_cols=195  Identities=15%  Similarity=0.174  Sum_probs=132.0

Q ss_pred             CccccCCCCCchhhhhhhhhhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcC-CCcccCC
Q psy16840         81 GLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRS-PIGCHGN  159 (413)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~-~iiiHrd  159 (413)
                      |.....|++|.+ ++.|..++.-+.+.-.......+.-...-.|+.            -.+  .||.||-+. .+ ||||
T Consensus       130 Ga~F~EGdcWiC-MELMd~SlDklYk~vy~vq~~~ipE~Ilg~Itv------------atV--~AL~yLK~~lki-IHRD  193 (361)
T KOG1006|consen  130 GALFSEGDCWIC-MELMDISLDKLYKRVYSVQKSRIPENILGHITV------------ATV--DALDYLKEELKI-IHRD  193 (361)
T ss_pred             hhhhcCCceeee-HHHHhhhHHHHHHHHHHHHhccCcHhhhhheee------------eeh--hHHHHHHHHhhh-hhcc
Confidence            444567888888 888888876444332222111111111111221            223  899999964 55 9999


Q ss_pred             CCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCC
Q psy16840        160 LKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG  239 (413)
Q Consensus       160 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~  239 (413)
                      +||+|||++..|.+||||||++..+..+    ...+.-.|...|||||.+.....  .|+.+|||||||++|||+.||..
T Consensus       194 vKPSNILldr~G~vKLCDFGIcGqLv~S----iAkT~daGCrpYmAPERi~p~~~--gyDiRSDvWSLGITL~EvAtG~f  267 (361)
T KOG1006|consen  194 VKPSNILLDRHGDVKLCDFGICGQLVDS----IAKTVDAGCRPYMAPERIDPSDK--GYDIRSDVWSLGITLYEVATGNF  267 (361)
T ss_pred             CChhheEEecCCCEeeecccchHhHHHH----HHhhhccCCccccChhccCCccC--CcchhhhhhhhcceEeeeecCCC
Confidence            9999999999999999999998765432    22334467889999999876543  35899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCcc--cccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        240 PFGGCGLYEPKGEDCEEPFRPNLE--LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       240 pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ||.+....-........+..|.+.  ...-..+..+..+|..|+.+|-..||.+.++...
T Consensus       268 Pyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  268 PYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             CcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence            997643211111111112222221  1112478899999999999999999999988653

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.93  E-value=2.7e-27  Score=222.47  Aligned_cols=140  Identities=17%  Similarity=0.200  Sum_probs=110.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++++ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+..+    
T Consensus       104 ql~--~~L~~lH~~~i-vH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  173 (320)
T cd05590         104 EIT--SALMFLHDKGI-IYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG---KTTSTFCGTPDYIAPEILQEMLY----  173 (320)
T ss_pred             HHH--HHHHHHHHCCe-EeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC---CcccccccCccccCHHHHcCCCC----
Confidence            777  99999999999 999999999999999999999999986532111   11234578999999999987766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~  293 (413)
                      +.++|||||||++|+|++|..||.+.+.......+....     ...+..+++++.+++.+||+.||.+||++.+
T Consensus       174 ~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~  243 (320)
T cd05590         174 GPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE-----VVYPTWLSQDAVDILKAFMTKNPTMRLGSLT  243 (320)
T ss_pred             CCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence            889999999999999999999997654222211111111     1123457889999999999999999999843

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.93  E-value=3e-27  Score=222.53  Aligned_cols=144  Identities=17%  Similarity=0.251  Sum_probs=112.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+..+    
T Consensus       108 qi~--~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  177 (323)
T cd05584         108 EIS--LALEHLHQQGI-IYRDLKPENILLDAQGHVKLTDFGLCKESIHEG---TVTHTFCGTIEYMAPEILMRSGH----  177 (323)
T ss_pred             HHH--HHHHHHHHCCe-ecCCCCHHHeEECCCCCEEEeeCcCCeecccCC---CcccccCCCccccChhhccCCCC----
Confidence            777  99999999999 999999999999999999999999986432211   11234578999999999988766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----ChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~  293 (413)
                      +.++|||||||++|||++|..||.+..............     ..++..+++.+.+++.+||+.+|++||     ++.+
T Consensus       178 ~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~  252 (323)
T cd05584         178 GKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGK-----LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAE  252 (323)
T ss_pred             CCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHH
Confidence            889999999999999999999997654222111111111     112356788999999999999999999     6777


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++..
T Consensus       253 l~~h  256 (323)
T cd05584         253 VQSH  256 (323)
T ss_pred             HhcC
Confidence            6654

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.93  E-value=3.2e-27  Score=221.63  Aligned_cols=139  Identities=22%  Similarity=0.332  Sum_probs=110.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++++ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+..+    
T Consensus       104 qi~--~al~~LH~~~i-vH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  173 (316)
T cd05592         104 EII--CGLQFLHKKGI-IYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE---GKASTFCGTPDYIAPEILKGQKY----  173 (316)
T ss_pred             HHH--HHHHHHHHCCE-EeCCCCHHHeEECCCCCEEEccCcCCeECCCCC---CccccccCCccccCHHHHcCCCC----
Confidence            777  99999999999 999999999999999999999999987542221   12334578999999999988766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP  292 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~  292 (413)
                      +.++|||||||++|||++|..||.+.+.......+..  ..+   ..+..++.++.+++.+||+.||.+||++.
T Consensus       174 ~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--~~~---~~~~~~~~~~~~ll~~~l~~~P~~R~~~~  242 (316)
T cd05592         174 NESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN--DRP---HFPRWISKEAKDCLSKLFERDPTKRLGVD  242 (316)
T ss_pred             CCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCC---CCCCCCCHHHHHHHHHHccCCHHHcCCCh
Confidence            8999999999999999999999986542221111111  111   12356788999999999999999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.93  E-value=1.1e-26  Score=215.88  Aligned_cols=163  Identities=23%  Similarity=0.366  Sum_probs=117.1

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ++..+..++.  |++  .||+|||++++ +||||||+||+++.++.++|+|||+++........ .......+++.|+||
T Consensus       128 ~~~~~~~~~~--~i~--~al~~LH~~~i-~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aP  201 (296)
T cd05051         128 SFSTLLYMAT--QIA--SGMRYLESLNF-VHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYY-RVQGRAPLPIRWMAW  201 (296)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHcCc-cccccchhceeecCCCceEEccccceeecccCcce-eecCcCCCCceecCH
Confidence            3333444444  777  99999999999 99999999999999999999999998754322111 112233457789999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCCC---CCCCCCcccccCCChHHHHHHHHHHh
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIG--RRGPFGGCGLYEPKGEDCE---EPFRPNLELLRDSCEPFVLACMRDCW  281 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~--g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl  281 (413)
                      |.+.+..+    +.++|||||||++||+++  +..||...+..........   ..........+..+++++.+++.+||
T Consensus       202 E~~~~~~~----~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  277 (296)
T cd05051         202 ESVLLGKF----TTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECW  277 (296)
T ss_pred             HHhhcCCC----CccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHh
Confidence            99887665    899999999999999998  6778865432211110000   00011111122457789999999999


Q ss_pred             ccCCCCCCChhHHHHHHH
Q psy16840        282 AEAPESRPDFPTIRARLK  299 (413)
Q Consensus       282 ~~~P~~Rps~~~i~~~l~  299 (413)
                      +.||.+|||+.++++.|+
T Consensus       278 ~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         278 RRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             ccChhcCCCHHHHHHHhc
Confidence            999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.93  E-value=7.9e-27  Score=214.88  Aligned_cols=149  Identities=29%  Similarity=0.448  Sum_probs=112.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe---EEEEeccccccccccccCCCcccccccCcccccCcccccCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAP  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  215 (413)
                      ||+  .||+|||++++ +||||||+||+++.++   .+||+|||+++......... .......+..|+|||++.+..+ 
T Consensus       124 qi~--~~l~~LH~~~i-vH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~-  198 (277)
T cd05036         124 DVA--KGCKYLEENHF-IHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYR-KGGRAMLPIKWMPPEAFLDGIF-  198 (277)
T ss_pred             HHH--HHHHHHHHCCE-eecccchheEEEeccCCCcceEeccCccccccCCcccee-cCCCCCccHhhCCHHHHhcCCc-
Confidence            666  99999999999 9999999999998654   69999999987653221111 1112233567999999987766 


Q ss_pred             CCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHH
Q psy16840        216 IRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI  294 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i  294 (413)
                         +.++|||||||++|||++ |..||.+............ ..++   ..+..++..+.+++.+||+.+|++|||+.++
T Consensus       199 ---~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~v  271 (277)
T cd05036         199 ---TSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTG-GGRL---DPPKGCPGPVYRIMTDCWQHTPEDRPNFATI  271 (277)
T ss_pred             ---CchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-CCcC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence               999999999999999997 9999976542221111111 1111   1235678899999999999999999999999


Q ss_pred             HHHHH
Q psy16840        295 RARLK  299 (413)
Q Consensus       295 ~~~l~  299 (413)
                      ++.|+
T Consensus       272 l~~l~  276 (277)
T cd05036         272 LERIQ  276 (277)
T ss_pred             HHHhh
Confidence            98875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0577|consensus

Probab=99.93  E-value=1.6e-26  Score=216.86  Aligned_cols=151  Identities=17%  Similarity=0.347  Sum_probs=119.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      +.+  .||+|||+.+. ||||||..|||+++.|.|||+|||.|.....       .++++|||.|||||++..-.- ..|
T Consensus       134 gaL--~gLaYLHS~~~-IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-------AnsFvGTPywMAPEVILAMDE-GqY  202 (948)
T KOG0577|consen  134 GAL--QGLAYLHSHNR-IHRDIKAGNILLSEPGLVKLADFGSASIMAP-------ANSFVGTPYWMAPEVILAMDE-GQY  202 (948)
T ss_pred             HHH--HHHHHHHHhhH-HhhhccccceEecCCCeeeeccccchhhcCc-------hhcccCCccccchhHheeccc-ccc
Confidence            555  99999999999 9999999999999999999999999876532       456799999999999864221 124


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      +-++||||||++..|+.-+++|+...+-......+ .....|.+.  ....+..++.++..||.+-|.+|||.++++.+-
T Consensus       203 dgkvDvWSLGITCIELAERkPPlFnMNAMSALYHI-AQNesPtLq--s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~  279 (948)
T KOG0577|consen  203 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-AQNESPTLQ--SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR  279 (948)
T ss_pred             CCccceeeccchhhhhhhcCCCccCchHHHHHHHH-HhcCCCCCC--CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence            88999999999999999999998765533333322 223334443  256889999999999999999999999998765


Q ss_pred             Hhhcc
Q psy16840        299 KHMKD  303 (413)
Q Consensus       299 ~~~~~  303 (413)
                      --...
T Consensus       280 fv~R~  284 (948)
T KOG0577|consen  280 FVLRE  284 (948)
T ss_pred             hhccC
Confidence            43333

>KOG1989|consensus

Probab=99.93  E-value=1.8e-26  Score=227.42  Aligned_cols=169  Identities=15%  Similarity=0.211  Sum_probs=124.3

Q ss_pred             cCChhhHhhhccccCCchHHhhHhhhcCC--CcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcc------ccc
Q psy16840        125 HSDIIIITYLMNFGDGIPRQGMTFLHRSP--IGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG------EHQ  196 (413)
Q Consensus       125 ~~~~~~~~~~~~~~~i~~a~gL~yLH~~~--iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~------~~~  196 (413)
                      .+....+..|+.  |++  +|+++||...  + ||||||-+||||+.++..||||||.|.-..........      .-.
T Consensus       140 ~lte~eVLkIf~--dv~--~AVa~mH~~~pPi-IHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~  214 (738)
T KOG1989|consen  140 RLTEDEVLKIFY--DVC--EAVAAMHYLKPPI-IHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIE  214 (738)
T ss_pred             cCChHHHHHHHH--HHH--HHHHHHhcCCCcc-chhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHH
Confidence            344455566666  888  9999999754  6 99999999999999999999999997543222111000      012


Q ss_pred             ccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHH
Q psy16840        197 YYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLAC  276 (413)
Q Consensus       197 ~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (413)
                      ...|+.|.|||++.-... ...+.|+|||+|||+||-|+....||.+.+...    ++...+..+.   .+.++..+.+|
T Consensus       215 k~TTp~YRsPEMIDlysg-~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la----Ilng~Y~~P~---~p~ys~~l~~L  286 (738)
T KOG1989|consen  215 KYTTPQYRSPEMIDLYSG-LPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA----ILNGNYSFPP---FPNYSDRLKDL  286 (738)
T ss_pred             hhCCccccChHHHhhhcC-CCCcchhHHHHHHHHHHHHHHhCCCcCcCccee----EEeccccCCC---CccHHHHHHHH
Confidence            245899999998753221 233999999999999999999999998754222    2222222111   14688999999


Q ss_pred             HHHHhccCCCCCCChhHHHHHHHhhcccCc
Q psy16840        277 MRDCWAEAPESRPDFPTIRARLKHMKDGKQ  306 (413)
Q Consensus       277 i~~cl~~~P~~Rps~~~i~~~l~~~~~~~~  306 (413)
                      |..||+.||.+||++.+++..+.++.....
T Consensus       287 I~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~  316 (738)
T KOG1989|consen  287 IRTMLQPNPDERPNIYQVLEEIFELANKPC  316 (738)
T ss_pred             HHHHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence            999999999999999999999988876543

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.93  E-value=1.6e-26  Score=211.45  Aligned_cols=152  Identities=20%  Similarity=0.330  Sum_probs=117.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +|+||||+||+++.++.++|+|||++........   ......++..|+|||.+.+...    
T Consensus       114 ~i~--~~l~~LH~~~i-~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~----  183 (267)
T cd08229         114 QLC--SALEHMHSRRV-MHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT---AAHSLVGTPYYMSPERIHENGY----  183 (267)
T ss_pred             HHH--HHHHHHHHCCe-ecCCCCHHHEEEcCCCCEEECcchhhhccccCCc---ccccccCCcCccCHHHhcCCCc----
Confidence            677  99999999999 9999999999999999999999999876532211   1223467889999999987766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCC-CCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPK-GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+||||+++|+|++|..||.+....... .........+..  ....+++.+.+++.+||..+|.+|||+.+|++.
T Consensus       184 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~  261 (267)
T cd08229         184 NFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPL--PSDHYSEELRQLVNMCINPDPEKRPDITYVYDV  261 (267)
T ss_pred             cchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCC--CcccccHHHHHHHHHhcCCCcccCCCHHHHHHH
Confidence            88999999999999999999999654321100 011111111111  124578899999999999999999999999998


Q ss_pred             HHhhc
Q psy16840        298 LKHMK  302 (413)
Q Consensus       298 l~~~~  302 (413)
                      ++++.
T Consensus       262 ~~~~~  266 (267)
T cd08229         262 AKRMH  266 (267)
T ss_pred             Hhhhc
Confidence            88763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.93  E-value=8e-27  Score=218.14  Aligned_cols=162  Identities=27%  Similarity=0.415  Sum_probs=120.1

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..+..++.  |++  .||+|||++|+ +||||||+||+++.++.+||+|||++.......... ......+++.|+|||
T Consensus       139 ~~~~~~~~~--qi~--~aL~~lH~~gi-~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~-~~~~~~~~~~y~aPE  212 (307)
T cd05098         139 FKDLVSCAY--QVA--RGMEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK-KTTNGRLPVKWMAPE  212 (307)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCc-ccccccHHheEEcCCCcEEECCCcccccccccchhh-ccccCCCccceeChH
Confidence            333344444  777  99999999999 999999999999999999999999987553211111 111123456899999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      .+.+..+    +.++|||||||++|+|++ |..||.+......... .....++   ..+..++.++.+++.+||..+|.
T Consensus       213 ~~~~~~~----~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~  284 (307)
T cd05098         213 ALFDRIY----THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL-LKEGHRM---DKPSNCTNELYMMMRDCWHAVPS  284 (307)
T ss_pred             HhccCCC----CcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH-HHcCCCC---CCCCcCCHHHHHHHHHHcccChh
Confidence            9987766    899999999999999998 8889876442211111 1111111   12356788999999999999999


Q ss_pred             CCCChhHHHHHHHhhcc
Q psy16840        287 SRPDFPTIRARLKHMKD  303 (413)
Q Consensus       287 ~Rps~~~i~~~l~~~~~  303 (413)
                      +|||+.++++.|+.+..
T Consensus       285 ~Rps~~evl~~l~~~~~  301 (307)
T cd05098         285 QRPTFKQLVEDLDRILA  301 (307)
T ss_pred             hCcCHHHHHHHHHHHHH
Confidence            99999999999988754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.93  E-value=1.6e-26  Score=211.03  Aligned_cols=150  Identities=28%  Similarity=0.447  Sum_probs=115.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||+.++ +||||||+||+++.++.+||+|||.+.........  ......++..|+|||...+..+    
T Consensus       110 ~l~--~aL~~lH~~~i-~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~----  180 (262)
T cd05071         110 QIA--SGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRF----  180 (262)
T ss_pred             HHH--HHHHHHHHCCc-cccccCcccEEEcCCCcEEeccCCceeeccccccc--cccCCcccceecCHhHhccCCC----
Confidence            777  99999999999 99999999999999999999999998765432211  1123345678999999877766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++ |..||.+........... ......   .+..++..+.+++.+||+.+|++||++.++++.
T Consensus       181 ~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~  256 (262)
T cd05071         181 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMP---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAF  256 (262)
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHh-cCCCCC---CccccCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence            899999999999999999 888987643221111111 111111   124578899999999999999999999999999


Q ss_pred             HHhh
Q psy16840        298 LKHM  301 (413)
Q Consensus       298 l~~~  301 (413)
                      |+..
T Consensus       257 l~~~  260 (262)
T cd05071         257 LEDY  260 (262)
T ss_pred             HHHh
Confidence            8764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.93  E-value=1.5e-26  Score=221.51  Aligned_cols=155  Identities=21%  Similarity=0.270  Sum_probs=114.7

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....    .......||+.|+|||++.
T Consensus       128 ~~~~~~--qi~--~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~----~~~~~~~~t~~y~aPE~~~  198 (364)
T cd07875         128 MSYLLY--QML--CGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----FMMTPYVVTRYYRAPEVIL  198 (364)
T ss_pred             HHHHHH--HHH--HHHHHHhhCCe-ecCCCCHHHEEECCCCcEEEEeCCCccccCCC----CcccCCcccCCcCCHHHHh
Confidence            334444  888  99999999999 99999999999999999999999998764321    1123456899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC-----------------------------------
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCE-----------------------------------  255 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~-----------------------------------  255 (413)
                      +..+    +.++|||||||++|+|++|+.||.+.+..........                                   
T Consensus       199 ~~~~----~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (364)
T cd07875         199 GMGY----KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKL  274 (364)
T ss_pred             CCCC----CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhh
Confidence            8776    8999999999999999999999976432111000000                                   


Q ss_pred             --CCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        256 --EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       256 --~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                        ....+.........+..+.+++.+||..||.+|||+.+++++-
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp  319 (364)
T cd07875         275 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP  319 (364)
T ss_pred             CccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence              0000000011122356789999999999999999999998753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.93  E-value=4.8e-27  Score=221.32  Aligned_cols=138  Identities=21%  Similarity=0.267  Sum_probs=108.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......   .......|++.|+|||.+.+..+    
T Consensus       109 qi~--~al~~lH~~~i-vHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~----  178 (324)
T cd05589         109 CVV--LGLQYLHENKI-VYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG---DRTSTFCGTPEFLAPEVLTETSY----  178 (324)
T ss_pred             HHH--HHHHHHHhCCe-EecCCCHHHeEECCCCcEEeCcccCCccCCCCC---CcccccccCccccCHhHhcCCCC----
Confidence            777  99999999999 999999999999999999999999986432111   11234578999999999988766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      +.++|||||||++|+|++|..||.+..............     ...+..+++.+.+++.+||..||.+||+.
T Consensus       179 ~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~-----~~~p~~~~~~~~~li~~~L~~dP~~R~~~  246 (324)
T cd05589         179 TRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDE-----VRYPRFLSREAISIMRRLLRRNPERRLGS  246 (324)
T ss_pred             CcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----CCCCCCCCHHHHHHHHHHhhcCHhHcCCC
Confidence            899999999999999999999997644222111111111     11235678899999999999999999954

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.93  E-value=9.8e-27  Score=211.70  Aligned_cols=147  Identities=25%  Similarity=0.454  Sum_probs=112.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++++ +||||||+||++++++.+||+|||+++........  ......++..|+|||.+.+..+    
T Consensus       108 qi~--~~l~~lH~~~i-~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~y~~Pe~~~~~~~----  178 (256)
T cd05059         108 DVC--EAMEYLESNGF-IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT--SSQGTKFPVKWAPPEVFDYSRF----  178 (256)
T ss_pred             HHH--HHHHHHHHCCc-ccccccHhhEEECCCCcEEECCcccceeccccccc--ccCCCCCCccccCHHHhccCCC----
Confidence            666  99999999999 99999999999999999999999998765322111  1111223457999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++ |..||............ ....++.   .+..+++.+.+++.+||..+|++|||+.++++.
T Consensus       179 ~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         179 SSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESV-SAGYRLY---RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             CchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH-HcCCcCC---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            889999999999999998 89999764322211111 1111222   124578899999999999999999999999887


Q ss_pred             H
Q psy16840        298 L  298 (413)
Q Consensus       298 l  298 (413)
                      |
T Consensus       255 l  255 (256)
T cd05059         255 L  255 (256)
T ss_pred             h
Confidence            5

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.93  E-value=2.6e-27  Score=222.77  Aligned_cols=144  Identities=17%  Similarity=0.241  Sum_probs=111.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.......   .......||+.|+|||++.+..+    
T Consensus       104 qi~--~aL~~LH~~~i-vHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  173 (321)
T cd05591         104 EVT--LALMFLHRHGV-IYRDLKLDNILLDAEGHCKLADFGMCKEGILNG---VTTTTFCGTPDYIAPEILQELEY----  173 (321)
T ss_pred             HHH--HHHHHHHHCCe-eccCCCHHHeEECCCCCEEEeecccceecccCC---ccccccccCccccCHHHHcCCCC----
Confidence            777  99999999999 999999999999999999999999986532211   11234568999999999988766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-------Ch
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-------DF  291 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-------s~  291 (413)
                      +.++|||||||++|+|++|+.||.+.+.......+.....     ..+..+++++.+++.+||+.||++||       ++
T Consensus       174 ~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~  248 (321)
T cd05591         174 GPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV-----LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGE  248 (321)
T ss_pred             CCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-----CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCH
Confidence            8999999999999999999999986543222221111111     12245788999999999999999999       55


Q ss_pred             hHHHHH
Q psy16840        292 PTIRAR  297 (413)
Q Consensus       292 ~~i~~~  297 (413)
                      .+++.+
T Consensus       249 ~~~~~h  254 (321)
T cd05591         249 DAIKQH  254 (321)
T ss_pred             HHHhcC
Confidence            666543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.93  E-value=9.9e-27  Score=211.82  Aligned_cols=156  Identities=28%  Similarity=0.431  Sum_probs=118.9

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  |++  .||+|||++++ +||||||+||+++.++.+||+|||.+........ ........++..|+|||.+
T Consensus       106 ~~~~~~~--~l~--~al~~lH~~~i-~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~  179 (262)
T cd00192         106 DLLSFAI--QIA--KGMEYLASKKF-VHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY-YRKKTGGKLPIRWMAPESL  179 (262)
T ss_pred             HHHHHHH--HHH--HHHHHHHcCCc-ccCccCcceEEECCCCcEEEcccccccccccccc-cccccCCCcCccccCHHHh
Confidence            3344444  677  99999999999 9999999999999999999999999876643221 1122334568899999998


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      ....+    +.++||||+|+++|+|++ |..||.............. ..+.   ..+..+++++.+++.+||..+|.+|
T Consensus       180 ~~~~~----~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~li~~~l~~~p~~R  251 (262)
T cd00192         180 KDGIF----TSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-GYRL---PKPEYCPDELYELMLSCWQLDPEDR  251 (262)
T ss_pred             ccCCc----chhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCC---CCCccCChHHHHHHHHHccCCcccC
Confidence            87755    899999999999999999 6999976532221111111 1111   1235678999999999999999999


Q ss_pred             CChhHHHHHHH
Q psy16840        289 PDFPTIRARLK  299 (413)
Q Consensus       289 ps~~~i~~~l~  299 (413)
                      ||+.+++..|+
T Consensus       252 ps~~~l~~~l~  262 (262)
T cd00192         252 PTFSELVERLE  262 (262)
T ss_pred             cCHHHHHHhhC
Confidence            99999988763

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.93  E-value=1.8e-26  Score=211.57  Aligned_cols=156  Identities=22%  Similarity=0.396  Sum_probs=111.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCC---
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAP---  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---  215 (413)
                      |++  .||+|||+.++ +||||||+||+++.++.+||+|||+++....... ........++..|+|||++.+....   
T Consensus       108 qi~--~al~~lH~~~i-~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~  183 (269)
T cd05087         108 EIA--LGLLHLHKNNF-IHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY-YVTPDQLWVPLRWIAPELVDEVHGNLLV  183 (269)
T ss_pred             HHH--HHHHHHHHCCE-eccccCcceEEEcCCCcEEECCccccccccCcce-eecCCCcCCcccccCHhHhccccccccc
Confidence            666  99999999999 9999999999999999999999999865422211 1112234567889999998653211   


Q ss_pred             CCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCC-CCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhH
Q psy16840        216 IRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGE-DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPT  293 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~  293 (413)
                      ..++.++||||||+++|||++ |..||........... ......+...+......++.+.+++..|| .+|++|||+++
T Consensus       184 ~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~  262 (269)
T cd05087         184 VDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEE  262 (269)
T ss_pred             cCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHH
Confidence            123789999999999999996 9999975432221110 11111111112222356788999999999 68999999999


Q ss_pred             HHHHHH
Q psy16840        294 IRARLK  299 (413)
Q Consensus       294 i~~~l~  299 (413)
                      |+..|.
T Consensus       263 l~~~l~  268 (269)
T cd05087         263 VHLLLS  268 (269)
T ss_pred             HHHHhc
Confidence            987764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.93  E-value=8.6e-27  Score=213.31  Aligned_cols=152  Identities=19%  Similarity=0.317  Sum_probs=116.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++++ +||||||+||+++.++.++|+|||++.......   .......|++.|+|||.+.+...    
T Consensus       114 ~i~--~~l~~LH~~~i-~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~~~----  183 (267)
T cd08228         114 QLC--SAVEHMHSRRV-MHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---TAAHSLVGTPYYMSPERIHENGY----  183 (267)
T ss_pred             HHH--HHHHHHhhCCe-eCCCCCHHHEEEcCCCCEEECccccceeccchh---HHHhcCCCCccccChhhhccCCC----
Confidence            677  99999999999 999999999999999999999999987653221   11223467889999999987766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCC-CCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPK-GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+||||+++|+|++|..||......... .........+..  ....++..+.+++.+||..+|++||++.++++.
T Consensus       184 ~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         184 NFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPL--PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             CchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCC--ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence            88999999999999999999998653311100 001111111111  123567889999999999999999999999999


Q ss_pred             HHhhc
Q psy16840        298 LKHMK  302 (413)
Q Consensus       298 l~~~~  302 (413)
                      ++.+.
T Consensus       262 ~~~~~  266 (267)
T cd08228         262 AKQMH  266 (267)
T ss_pred             HHHhc
Confidence            88763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.93  E-value=2.3e-27  Score=223.88  Aligned_cols=141  Identities=16%  Similarity=0.196  Sum_probs=111.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....      .....||+.|+|||++.+..+    
T Consensus       126 qi~--~aL~~LH~~~i-vH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~----  192 (329)
T PTZ00263        126 ELV--LAFEYLHSKDI-IYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR------TFTLCGTPEYLAPEVIQSKGH----  192 (329)
T ss_pred             HHH--HHHHHHHHCCe-eecCCCHHHEEECCCCCEEEeeccCceEcCCC------cceecCChhhcCHHHHcCCCC----
Confidence            777  99999999999 99999999999999999999999998765321      223578999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC-----hhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD-----FPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps-----~~~  293 (413)
                      +.++|||||||++|+|++|..||.+.........+....  .   .++..+++.+.+++.+||+.||.+||+     +.+
T Consensus       193 ~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~--~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~  267 (329)
T PTZ00263        193 GKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGR--L---KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVAD  267 (329)
T ss_pred             CCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC--c---CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHH
Confidence            899999999999999999999997654222111111111  1   123457889999999999999999997     466


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++.+
T Consensus       268 ll~h  271 (329)
T PTZ00263        268 VKNH  271 (329)
T ss_pred             HhcC
Confidence            5544

>KOG0200|consensus

Probab=99.93  E-value=9.8e-27  Score=234.60  Aligned_cols=153  Identities=27%  Similarity=0.432  Sum_probs=118.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+||++.++ |||||-.+|||++.+..+||+|||+|+................-...|||||.+....+    
T Consensus       426 QIa--~GMe~L~~~~~-vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~f----  498 (609)
T KOG0200|consen  426 QIA--NGMEYLASVPC-VHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVF----  498 (609)
T ss_pred             HHH--HHHHHHhhCCc-cchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcc----
Confidence            666  99999999999 99999999999999999999999999864333222111111002356999999999777    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||++|||+++ |..||.+.............+.+...   |..|+++++++|+.||+.+|++||+|.++.+.
T Consensus       499 t~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~---P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~  575 (609)
T KOG0200|consen  499 TSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQ---PEHCSDEIYDLMKSCWNADPEDRPTFSECVEF  575 (609)
T ss_pred             cccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCC---CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            999999999999999998 88999873311111223344444443   36789999999999999999999999999998


Q ss_pred             HHhh
Q psy16840        298 LKHM  301 (413)
Q Consensus       298 l~~~  301 (413)
                      +...
T Consensus       576 ~~~~  579 (609)
T KOG0200|consen  576 FEKH  579 (609)
T ss_pred             HHHH
Confidence            8764

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.93  E-value=1.7e-26  Score=210.06  Aligned_cols=155  Identities=27%  Similarity=0.473  Sum_probs=116.0

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  |++  .||+|||++|+ +||||||+||+++.++.+||+|||+++.......  .......++..|+|||.
T Consensus       100 ~~~~~~~~--~i~--~~l~~lH~~~i-~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~y~aPE~  172 (256)
T cd05114         100 DMLLSMCQ--DVC--EGMEYLERNSF-IHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY--TSSSGAKFPVKWSPPEV  172 (256)
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCc-cccccCcceEEEcCCCeEEECCCCCccccCCCce--eccCCCCCchhhCChhh
Confidence            33344444  777  99999999999 9999999999999999999999999875432211  11122234568999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      +.+..+    +.++||||||+++|++++ |+.||.............. ..++..   +...+..+.+++.+||+.+|.+
T Consensus       173 ~~~~~~----~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~-~~~~~~---~~~~~~~~~~li~~c~~~~p~~  244 (256)
T cd05114         173 FNFSKY----SSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISR-GFRLYR---PKLASMTVYEVMYSCWHEKPEG  244 (256)
T ss_pred             cccCcc----chhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCCCCC---CCCCCHHHHHHHHHHccCCccc
Confidence            987766    889999999999999999 8999976543222221111 111111   2346778999999999999999


Q ss_pred             CCChhHHHHHH
Q psy16840        288 RPDFPTIRARL  298 (413)
Q Consensus       288 Rps~~~i~~~l  298 (413)
                      ||++.+++..|
T Consensus       245 Rps~~~l~~~l  255 (256)
T cd05114         245 RPTFAELLRAI  255 (256)
T ss_pred             CcCHHHHHHhh
Confidence            99999998876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.93  E-value=3.9e-27  Score=221.81  Aligned_cols=138  Identities=22%  Similarity=0.291  Sum_probs=109.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....   ........||+.|+|||++.+..+    
T Consensus       109 qi~--~aL~~LH~~~i-vHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~----  178 (323)
T cd05616         109 EIA--IGLFFLHSKGI-IYRDLKLDNVMLDSEGHIKIADFGMCKENMWD---GVTTKTFCGTPDYIAPEIIAYQPY----  178 (323)
T ss_pred             HHH--HHHHHHHHCCE-EecCCCHHHeEECCCCcEEEccCCCceecCCC---CCccccCCCChhhcCHHHhcCCCC----
Confidence            777  99999999999 99999999999999999999999998653211   112234578999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      +.++|||||||++|||++|+.||.+.+.......+.....     ..+..+++++.+++.+||+.+|.+|++.
T Consensus       179 ~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         179 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV-----AYPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             CCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            8999999999999999999999986543222221111111     1235678899999999999999999986

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.93  E-value=1.9e-26  Score=211.15  Aligned_cols=153  Identities=17%  Similarity=0.245  Sum_probs=112.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||+.++ +||||||+||+++.++.+||+|||++.......   .......|++.|+|||.+..... ..+
T Consensus       114 qi~--~~l~~lH~~~i-~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~-~~~  186 (267)
T cd06646         114 ETL--QGLAYLHSKGK-MHRDIKGANILLTDNGDVKLADFGVAAKITATI---AKRKSFIGTPYWMAPEVAAVEKN-GGY  186 (267)
T ss_pred             HHH--HHHHHHHHCCc-cccCCCHHHEEECCCCCEEECcCccceeecccc---cccCccccCccccCHhHcccccC-CCC
Confidence            777  99999999999 999999999999999999999999987653211   11233467889999998853221 123


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      +.++|||||||++|||++|..||..................+........++..+.+++.+||..+|++|||++++++.|
T Consensus       187 ~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         187 NQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             cchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            78999999999999999999998654322221111111222221111235678999999999999999999999998653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.93  E-value=2.4e-27  Score=223.41  Aligned_cols=143  Identities=17%  Similarity=0.181  Sum_probs=112.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+..+    
T Consensus       104 qi~--~~L~~lH~~gi-iHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  173 (325)
T cd05602         104 EIA--SALGYLHSLNI-VYRDLKPENILLDSQGHIVLTDFGLCKENIEHN---GTTSTFCGTPEYLAPEVLHKQPY----  173 (325)
T ss_pred             HHH--HHHHHHHHCCe-EecCCCHHHeEECCCCCEEEccCCCCcccccCC---CCcccccCCccccCHHHHcCCCC----
Confidence            777  99999999999 999999999999999999999999987532211   11234578999999999988766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                      +.++|||||||++|+|++|..||.+.+.............     ..+..+++.+.+++.+||+.||.+||++.+.+.
T Consensus       174 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~  246 (325)
T cd05602         174 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL-----QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM  246 (325)
T ss_pred             CCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc-----CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence            8899999999999999999999976543222111111111     122467889999999999999999999875443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0667|consensus

Probab=99.93  E-value=1.4e-26  Score=221.45  Aligned_cols=124  Identities=25%  Similarity=0.378  Sum_probs=101.4

Q ss_pred             hhhhhhhhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC--e
Q psy16840         94 IASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR--W  171 (413)
Q Consensus        94 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~--~  171 (413)
                      ++.++.||.++|+.+++..   +++..          +..+..  ||+  .||.+||+.+| ||+||||+||||..-  .
T Consensus       267 fELL~~NLYellK~n~f~G---lsl~~----------ir~~~~--Qil--~~L~~L~~l~I-IHcDLKPENILL~~~~r~  328 (586)
T KOG0667|consen  267 FELLSTNLYELLKNNKFRG---LSLPL----------VRKFAQ--QIL--TALLFLHELGI-IHCDLKPENILLKDPKRS  328 (586)
T ss_pred             ehhhhhhHHHHHHhcCCCC---CCHHH----------HHHHHH--HHH--HHHHHHHhCCe-eeccCChhheeeccCCcC
Confidence            7788889999999987653   33333          333444  666  99999999999 999999999999754  4


Q ss_pred             EEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q psy16840        172 VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG  245 (413)
Q Consensus       172 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~  245 (413)
                      .+||+|||.|.....      ...++..+..|.|||++.+.++    +.+.||||||||+.||++|.+-|.+.+
T Consensus       329 ~vKVIDFGSSc~~~q------~vytYiQSRfYRAPEVILGlpY----~~~IDmWSLGCIlAEL~tG~PLfpG~n  392 (586)
T KOG0667|consen  329 RIKVIDFGSSCFESQ------RVYTYIQSRFYRAPEVILGLPY----DTAIDMWSLGCILAELFTGEPLFPGDN  392 (586)
T ss_pred             ceeEEecccccccCC------cceeeeeccccccchhhccCCC----CCccceeehhhhHHhHhcCccccCCCC
Confidence            799999999876432      1236677889999999999988    999999999999999999988887765

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.93  E-value=2.2e-26  Score=209.82  Aligned_cols=149  Identities=28%  Similarity=0.463  Sum_probs=114.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++++ +||||||+||++++++.+||+|||++.........  ......++..|+|||.+.+...    
T Consensus       110 ~l~--~al~~lH~~~i-~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~----  180 (260)
T cd05070         110 QVA--AGMAYIERMNY-IHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRF----  180 (260)
T ss_pred             HHH--HHHHHHHHCCc-ccCCCccceEEEeCCceEEeCCceeeeeccCcccc--cccCCCCCccccChHHHhcCCC----
Confidence            666  99999999999 99999999999999999999999998765322211  1122234567999999877665    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++ |..||.+....+...... ....+.   .+...+..+.+++.+||..+|.+|||+.++.+.
T Consensus       181 ~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~  256 (260)
T cd05070         181 TIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE-RGYRMP---CPQDCPISLHELMLQCWKKDPEERPTFEYLQSF  256 (260)
T ss_pred             cchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCC---CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            899999999999999999 899997644222111111 111111   235678899999999999999999999999988


Q ss_pred             HHh
Q psy16840        298 LKH  300 (413)
Q Consensus       298 l~~  300 (413)
                      |+.
T Consensus       257 l~~  259 (260)
T cd05070         257 LED  259 (260)
T ss_pred             Hhc
Confidence            764

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0690|consensus

Probab=99.93  E-value=2.9e-27  Score=207.49  Aligned_cols=137  Identities=19%  Similarity=0.244  Sum_probs=114.1

Q ss_pred             cCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        138 GDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       138 ~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      ++|+  .||.|||+++| |.||||.+|+|+|.+|++||+|||+++.--.   ......+.||||.|+|||++....+   
T Consensus       275 aEIv--sAL~YLHs~~i-vYRDlKLENLlLDkDGHIKitDFGLCKE~I~---~g~t~kTFCGTPEYLAPEVleDnDY---  345 (516)
T KOG0690|consen  275 AEIV--SALGYLHSRNI-VYRDLKLENLLLDKDGHIKITDFGLCKEEIK---YGDTTKTFCGTPEYLAPEVLEDNDY---  345 (516)
T ss_pred             HHHH--HHhhhhhhCCe-eeeechhhhheeccCCceEeeecccchhccc---ccceeccccCChhhcCchhhccccc---
Confidence            3777  99999999999 9999999999999999999999999875321   1222457899999999999999988   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                       +.++|.|.+|+++|||++|+.||...........+.....+     +|..++++.+.|+..+|.+||.+|.
T Consensus       346 -graVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~k-----FPr~ls~eAktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  346 -GRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLK-----FPRTLSPEAKTLLSGLLKKDPKKRL  411 (516)
T ss_pred             -cceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhcc-----CCccCCHHHHHHHHHHhhcChHhhc
Confidence             99999999999999999999999876544444333333332     3467899999999999999999995

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.93  E-value=2.3e-26  Score=210.70  Aligned_cols=149  Identities=28%  Similarity=0.471  Sum_probs=113.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe-----EEEEeccccccccccccCCCcccccccCcccccCcccccCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW-----VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTH  213 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~-----~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  213 (413)
                      |++  .||+|||+.++ +|+||||+||+++.++     .+||+|||+++......... ......++..|+|||.+.+..
T Consensus       114 ~l~--~~l~~lH~~~i-~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~  189 (269)
T cd05044         114 DVA--KGCVYLEQMHF-IHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYR-KEGEGLLPVRWMAPESLLDGK  189 (269)
T ss_pred             HHH--HHHHHHHhCCc-ccCCCChheEEEecCCCCCCcceEECCcccccccccccccc-cCcccCCCccccCHHHHccCC
Confidence            566  99999999999 9999999999999877     89999999987553221111 112234567899999998776


Q ss_pred             CCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh
Q psy16840        214 APIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP  292 (413)
Q Consensus       214 ~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~  292 (413)
                      .    +.++||||||+++|+|++ |..||............. ....+   ..+..+++.+.+++.+||..+|.+||++.
T Consensus       190 ~----~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  261 (269)
T cd05044         190 F----TTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVT-AGGRL---QKPENCPDKIYQLMTNCWAQDPSERPTFD  261 (269)
T ss_pred             c----ccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHh-cCCcc---CCcccchHHHHHHHHHHcCCCcccCCCHH
Confidence            6    899999999999999998 999997543222111111 11111   12246788999999999999999999999


Q ss_pred             HHHHHHH
Q psy16840        293 TIRARLK  299 (413)
Q Consensus       293 ~i~~~l~  299 (413)
                      ++++.|+
T Consensus       262 ~i~~~l~  268 (269)
T cd05044         262 RIQEILQ  268 (269)
T ss_pred             HHHHHHh
Confidence            9998875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.93  E-value=3e-26  Score=211.77  Aligned_cols=162  Identities=22%  Similarity=0.288  Sum_probs=117.7

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..+..++.  |++  .||+|||++|+ +||||||+||+++.++.+||+|||++.................++..|+|||
T Consensus       108 ~~~~~~i~~--~i~--~aL~~lH~~gi-~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE  182 (284)
T cd05079         108 LKQQLKYAV--QIC--KGMDYLGSRQY-VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPE  182 (284)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCe-eecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHH
Confidence            333344444  777  99999999999 9999999999999999999999999876543322111122345677899999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC--------------CCCCCCCCCcccccCCChHHH
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE--------------DCEEPFRPNLELLRDSCEPFV  273 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~l  273 (413)
                      .+.+..+    +.++||||||+++|+++++..|+...........              ......+.   ..+..+++.+
T Consensus       183 ~~~~~~~----~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  255 (284)
T cd05079         183 CLIQSKF----YIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRL---PRPPNCPEEV  255 (284)
T ss_pred             HhccCCC----CccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccC---CCCCCCCHHH
Confidence            9887766    8899999999999999998776432110000000              00000111   1235678999


Q ss_pred             HHHHHHHhccCCCCCCChhHHHHHHHhh
Q psy16840        274 LACMRDCWAEAPESRPDFPTIRARLKHM  301 (413)
Q Consensus       274 ~~li~~cl~~~P~~Rps~~~i~~~l~~~  301 (413)
                      .+++.+||+.+|.+|||+.+++..|+.+
T Consensus       256 ~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         256 YQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            9999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.93  E-value=1.9e-26  Score=210.28  Aligned_cols=148  Identities=27%  Similarity=0.462  Sum_probs=115.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +||||||+||+++.++.+||+|||++........   ......++..|+|||.+.+..+    
T Consensus       112 ~i~--~al~~lH~~~i-~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~----  181 (261)
T cd05148         112 QVA--EGMAYLEEQNS-IHRDLAARNILVGEDLVCKVADFGLARLIKEDVY---LSSDKKIPYKWTAPEAASHGTF----  181 (261)
T ss_pred             HHH--HHHHHHHHCCe-eccccCcceEEEcCCceEEEccccchhhcCCccc---cccCCCCceEecCHHHHccCCC----
Confidence            677  99999999999 9999999999999999999999999876532211   1123345678999999887766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++ |..||......+...... ...++.   .+..+++.+.+++.+||..||.+|||+.++++.
T Consensus       182 ~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~  257 (261)
T cd05148         182 STKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT-AGYRMP---CPAKCPQEIYKIMLECWAAEPEDRPSFKALREE  257 (261)
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH-hCCcCC---CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            889999999999999998 899997654222211111 122222   235678999999999999999999999999999


Q ss_pred             HHh
Q psy16840        298 LKH  300 (413)
Q Consensus       298 l~~  300 (413)
                      |+.
T Consensus       258 L~~  260 (261)
T cd05148         258 LDN  260 (261)
T ss_pred             Hhc
Confidence            875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.93  E-value=3.8e-26  Score=211.07  Aligned_cols=153  Identities=22%  Similarity=0.371  Sum_probs=112.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++|+ +||||||+||+++.++.+||+|||++.................++..|+|||.+.+..+    
T Consensus       116 ~l~--~aL~~LH~~~i-~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~----  188 (284)
T cd05081         116 QIC--KGMEYLGSKRY-VHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKF----  188 (284)
T ss_pred             HHH--HHHHHHHHCCc-eeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCc----
Confidence            777  99999999999 99999999999999999999999998865432211111112233456999999987766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--CC-------------CCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--ED-------------CEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--~~-------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      +.++||||||+++|||++|..|+..........  ..             ......+   ..+..++.++.+++.+||+.
T Consensus       189 ~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~  265 (284)
T cd05081         189 SVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRL---PAPPGCPAEIYAIMKECWNN  265 (284)
T ss_pred             ChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcC---CCCCCCCHHHHHHHHHHccC
Confidence            889999999999999999877754322110000  00             0000011   11246788999999999999


Q ss_pred             CCCCCCChhHHHHHHHhh
Q psy16840        284 APESRPDFPTIRARLKHM  301 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l~~~  301 (413)
                      +|++|||+.+++..|+.+
T Consensus       266 ~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         266 DPSQRPSFSELALQVEAI  283 (284)
T ss_pred             ChhhCCCHHHHHHHHHhc
Confidence            999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG0579|consensus

Probab=99.93  E-value=1.4e-26  Score=218.73  Aligned_cols=160  Identities=18%  Similarity=0.269  Sum_probs=124.6

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..+++  ++|  .||.|||+++| ||||||..|||++-+|.++|+|||.+...   ........++.|||.|||||+..
T Consensus       132 Iqvvc~--q~l--dALn~LHs~~i-IHRDLKAGNiL~TldGdirLADFGVSAKn---~~t~qkRDsFIGTPYWMAPEVvm  203 (1187)
T KOG0579|consen  132 IQVVCY--QVL--DALNWLHSQNI-IHRDLKAGNILLTLDGDIRLADFGVSAKN---KSTRQKRDSFIGTPYWMAPEVVM  203 (1187)
T ss_pred             HHHHHH--HHH--HHHHHHhhcch-hhhhccccceEEEecCcEeeecccccccc---hhHHhhhccccCCcccccchhee
Confidence            344555  777  99999999999 99999999999999999999999996432   12222345778999999999876


Q ss_pred             CCCC-CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHA-PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~-~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .... +.+|+.++||||||++|.||..+.+|....+.......+.. ..+|.+ .-|...+..+.+++.+||.+||..||
T Consensus       204 CET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaK-SePPTL-lqPS~Ws~~F~DfLk~cL~Knp~~Rp  281 (1187)
T KOG0579|consen  204 CETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK-SEPPTL-LQPSHWSRSFSDFLKRCLVKNPRNRP  281 (1187)
T ss_pred             eccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhh-cCCCcc-cCcchhhhHHHHHHHHHHhcCCccCC
Confidence            4432 23569999999999999999999999887765544433322 222322 23467888999999999999999999


Q ss_pred             ChhHHHHHHHh
Q psy16840        290 DFPTIRARLKH  300 (413)
Q Consensus       290 s~~~i~~~l~~  300 (413)
                      ++.+++++..-
T Consensus       282 ~aaqll~Hpfv  292 (1187)
T KOG0579|consen  282 PAAQLLKHPFV  292 (1187)
T ss_pred             CHHHHhhCccc
Confidence            99999877543

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.93  E-value=2.5e-26  Score=221.32  Aligned_cols=163  Identities=23%  Similarity=0.366  Sum_probs=123.0

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +.+..+..++.  ||+  .||.|||+.++ +||||||+|||+++++.+||+|||+++........ .......++..|+|
T Consensus       236 l~~~~~~~~~~--qi~--~aL~~LH~~~i-vHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~a  309 (401)
T cd05107         236 LSYMDLVGFSY--QVA--NGMEFLASKNC-VHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY-ISKGSTFLPLKWMA  309 (401)
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHhcCCc-CcccCCcceEEEeCCCEEEEEecCcceeccccccc-ccCCCcCCCCceeC
Confidence            34444455555  788  99999999999 99999999999999999999999998764322111 11223356788999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||.+.+..+    +.++||||||+++|||++ |..||......+..........++.   .+..++.++.+++.+||..+
T Consensus       310 PE~~~~~~~----~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~---~p~~~~~~l~~li~~cl~~~  382 (401)
T cd05107         310 PESIFNNLY----TTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMA---KPAHASDEIYEIMQKCWEEK  382 (401)
T ss_pred             hHHhcCCCC----CcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHHcCCC
Confidence            999987766    889999999999999998 8899876432221111111122222   23467889999999999999


Q ss_pred             CCCCCChhHHHHHHHhh
Q psy16840        285 PESRPDFPTIRARLKHM  301 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~  301 (413)
                      |.+||++.+|+..|+.+
T Consensus       383 P~~RPs~~ell~~L~~~  399 (401)
T cd05107         383 FEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             hhHCcCHHHHHHHHHHH
Confidence            99999999999998875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.93  E-value=6.7e-27  Score=220.31  Aligned_cols=138  Identities=20%  Similarity=0.261  Sum_probs=108.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+..+    
T Consensus       109 qi~--~al~~lH~~~i-vH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  178 (324)
T cd05587         109 EIA--IGLFFLHSKGI-IYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG---KTTRTFCGTPDYIAPEIIAYQPY----  178 (324)
T ss_pred             HHH--HHHHHHHHCCe-EecCCCHHHeEEcCCCCEEEeecCcceecCCCC---CceeeecCCccccChhhhcCCCC----
Confidence            777  99999999999 999999999999999999999999986432111   11234578999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      +.++|||||||++|+|++|+.||.+.........+....  +   ..+..+++++.+++.+||..||.+|++.
T Consensus       179 ~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~--~---~~~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         179 GKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHN--V---SYPKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             CcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--C---CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            899999999999999999999997644222111111111  1   1235678899999999999999999987

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.93  E-value=4.3e-27  Score=221.51  Aligned_cols=139  Identities=19%  Similarity=0.212  Sum_probs=109.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....   ........||+.|+|||++.+..+    
T Consensus       104 qi~--~~l~~lH~~gi-vH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~----  173 (323)
T cd05575         104 EIA--SALGYLHSLNI-IYRDLKPENILLDSQGHVVLTDFGLCKEGIEH---SKTTSTFCGTPEYLAPEVLRKQPY----  173 (323)
T ss_pred             HHH--HHHHHHHHCCe-EeCCCCHHHeEECCCCcEEEeccCCCcccccC---CCccccccCChhhcChhhhcCCCC----
Confidence            777  99999999999 99999999999999999999999998653211   112234568999999999988766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP  292 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~  292 (413)
                      +.++|||||||++|+|++|..||.+.+.......+.....     ..+...++.+.+++.+||+.||.+||++.
T Consensus       174 ~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         174 DRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL-----RLKPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             CccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC-----CCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            8999999999999999999999976542221111111111     12245788999999999999999999986

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.93  E-value=1.8e-26  Score=215.29  Aligned_cols=160  Identities=24%  Similarity=0.384  Sum_probs=119.7

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||.|||++++ +||||||+||+++.++.+||+|||+++........ .......++..|+|||.+.
T Consensus       111 ~~~~~~--qi~--~~L~~LH~~~i-vH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~  184 (303)
T cd05110         111 LLNWCV--QIA--KGMMYLEERRL-VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE-YNADGGKMPIKWMALECIH  184 (303)
T ss_pred             HHHHHH--HHH--HHHHHHhhcCe-eccccccceeeecCCCceEEccccccccccCcccc-cccCCCccccccCCHHHhc
Confidence            334444  777  99999999999 99999999999999999999999998765432211 1122334567899999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +...    +.++||||||+++||+++ |..||.+......... ......+..   +..++..+.+++.+||..+|++||
T Consensus       185 ~~~~----~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~li~~c~~~~p~~Rp  256 (303)
T cd05110         185 YRKF----THQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL-LEKGERLPQ---PPICTIDVYMVMVKCWMIDADSRP  256 (303)
T ss_pred             cCCC----ChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHCCCCCCC---CCCCCHHHHHHHHHHcCCChhhCc
Confidence            7766    899999999999999997 8999976432111111 111111111   245678899999999999999999


Q ss_pred             ChhHHHHHHHhhccc
Q psy16840        290 DFPTIRARLKHMKDG  304 (413)
Q Consensus       290 s~~~i~~~l~~~~~~  304 (413)
                      ++.+++..|+.+...
T Consensus       257 ~~~~l~~~l~~~~~~  271 (303)
T cd05110         257 KFKELAAEFSRMARD  271 (303)
T ss_pred             CHHHHHHHHHHHHhc
Confidence            999999998876543

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=3.4e-27  Score=224.76  Aligned_cols=150  Identities=20%  Similarity=0.259  Sum_probs=114.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEecccccccccccc--------------------------CCCc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE--------------------------NDSI  192 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--------------------------~~~~  192 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++.......                          ....
T Consensus       109 qi~--~aL~~LH~~gi-iH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (350)
T cd05573         109 ELV--LALDSVHKLGF-IHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRV  185 (350)
T ss_pred             HHH--HHHHHHHHCCe-eccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccc
Confidence            777  99999999999 999999999999999999999999987654322                          0011


Q ss_pred             ccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHH
Q psy16840        193 GEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPF  272 (413)
Q Consensus       193 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (413)
                      ......||+.|+|||++.+..+    +.++|||||||++|||++|..||...........+.........+. ...++++
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~----~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~~~~  260 (350)
T cd05573         186 RANSTVGTPDYIAPEVLRGTPY----GLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPP-DPPVSPE  260 (350)
T ss_pred             cccccccCccccCHHHHcCCCC----CCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCC-CCCCCHH
Confidence            2234568999999999988866    8999999999999999999999987552222111111000111111 1236899


Q ss_pred             HHHHHHHHhccCCCCCCC-hhHHHHH
Q psy16840        273 VLACMRDCWAEAPESRPD-FPTIRAR  297 (413)
Q Consensus       273 l~~li~~cl~~~P~~Rps-~~~i~~~  297 (413)
                      +.++|.+||. ||.+||+ +.+++.+
T Consensus       261 ~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         261 AIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             HHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            9999999997 9999999 9999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.93  E-value=7.5e-27  Score=219.35  Aligned_cols=144  Identities=21%  Similarity=0.283  Sum_probs=112.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++++ +||||||+|||++.++.+||+|||+++......   .......|++.|+|||++.+..+    
T Consensus       104 qi~--~~l~~LH~~~i-vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~----  173 (318)
T cd05570         104 EIV--LGLQFLHERGI-IYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG---VTTSTFCGTPDYIAPEILSYQPY----  173 (318)
T ss_pred             HHH--HHHHHHHhCCe-EccCCCHHHeEECCCCcEEecccCCCeecCcCC---CcccceecCccccCHHHhcCCCC----
Confidence            777  99999999999 999999999999999999999999986432111   11234468999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh-----hH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF-----PT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~-----~~  293 (413)
                      +.++|||||||++|+|++|..||.+.+.......+....  +   ..+..+++.+.++|.+||..||.+||++     .+
T Consensus       174 ~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~--~---~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~  248 (318)
T cd05570         174 GPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDE--V---RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQD  248 (318)
T ss_pred             CcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--C---CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHH
Confidence            899999999999999999999997644222111111111  1   1234678899999999999999999999     66


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++..
T Consensus       249 ll~~  252 (318)
T cd05570         249 IKGH  252 (318)
T ss_pred             HhcC
Confidence            6543

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0584|consensus

Probab=99.93  E-value=6.2e-27  Score=222.04  Aligned_cols=150  Identities=21%  Similarity=0.340  Sum_probs=120.4

Q ss_pred             HhhhccccCCchHHhhHhhhcC-CCcccCCCCCCCeEEcCC-eEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRS-PIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~-~iiiHrdlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      +.+.++  ||+  +||.|||++ +.|||||||.+||+|+++ |.|||+|+|||.......     .....|||.|||||+
T Consensus       145 ik~W~R--QIL--kGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~-----aksvIGTPEFMAPEm  215 (632)
T KOG0584|consen  145 IKSWCR--QIL--KGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH-----AKSVIGTPEFMAPEM  215 (632)
T ss_pred             HHHHHH--HHH--HHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc-----cceeccCccccChHH
Confidence            344455  889  999999965 455999999999999977 899999999998764322     234689999999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      +. ..|    +..+||||||+++.||.|+..||..+.......+....+..|.-  +..--.++++++|.+|+.. ..+|
T Consensus       216 YE-E~Y----nE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s--l~kV~dPevr~fIekCl~~-~~~R  287 (632)
T KOG0584|consen  216 YE-ENY----NELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA--LSKVKDPEVREFIEKCLAT-KSER  287 (632)
T ss_pred             Hh-hhc----chhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH--hhccCCHHHHHHHHHHhcC-chhc
Confidence            87 444    89999999999999999999999887766555555545544432  1223468999999999999 9999


Q ss_pred             CChhHHHHH
Q psy16840        289 PDFPTIRAR  297 (413)
Q Consensus       289 ps~~~i~~~  297 (413)
                      ||+.+++..
T Consensus       288 ~sa~eLL~d  296 (632)
T KOG0584|consen  288 LSAKELLKD  296 (632)
T ss_pred             cCHHHHhhC
Confidence            999999864

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.93  E-value=2.9e-26  Score=217.68  Aligned_cols=164  Identities=26%  Similarity=0.402  Sum_probs=120.8

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+.....++.  ||+  .||+|||++++ +||||||+|||++.++.+||+|||++........ ........++..|+||
T Consensus       177 ~~~~~~~~~~--qi~--~al~~lH~~~i-~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aP  250 (343)
T cd05103         177 TLEDLICYSF--QVA--KGMEFLASRKC-IHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGDARLPLKWMAP  250 (343)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCe-ecCCCccCeEEEcCCCcEEEEecccccccccCcc-hhhcCCCCCCcceECc
Confidence            3333444444  777  99999999999 9999999999999999999999999876432211 1111223456779999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |.+.+..+    +.++||||||+++|++++ |..||.................++..   +...++++.+++..||+.+|
T Consensus       251 E~~~~~~~----~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~cl~~~p  323 (343)
T cd05103         251 ETIFDRVY----TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA---PDYTTPEMYQTMLDCWHGEP  323 (343)
T ss_pred             HHhcCCCC----CchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCC---CCCCCHHHHHHHHHHccCCh
Confidence            99887766    899999999999999997 89999764322111111111111111   23467889999999999999


Q ss_pred             CCCCChhHHHHHHHhhcc
Q psy16840        286 ESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~~  303 (413)
                      .+|||+.++++.|+.+.+
T Consensus       324 ~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         324 SQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             hhCcCHHHHHHHHHHHHh
Confidence            999999999999987754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.93  E-value=7.3e-27  Score=219.14  Aligned_cols=142  Identities=22%  Similarity=0.283  Sum_probs=110.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||++++ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+..+    
T Consensus       104 qi~--~al~~LH~~~i-vHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  173 (316)
T cd05619         104 EII--CGLQFLHSKGI-VYRDLKLDNILLDTDGHIKIADFGMCKENMLGD---AKTCTFCGTPDYIAPEILLGQKY----  173 (316)
T ss_pred             HHH--HHHHHHHhCCe-EeCCCCHHHEEECCCCCEEEccCCcceECCCCC---CceeeecCCccccCHHHHcCCCC----
Confidence            777  99999999999 999999999999999999999999986432111   11234568999999999988766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh-HHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP-TIR  295 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~-~i~  295 (413)
                      +.++|||||||++|||++|..||.+............  ..+   ..+..++.++.+++.+||..||.+||++. ++.
T Consensus       174 ~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~--~~~---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         174 NTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM--DNP---CYPRWLTREAKDILVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             CchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCC---CCCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence            8999999999999999999999976442211111111  011   12345788999999999999999999996 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.93  E-value=2.7e-26  Score=210.48  Aligned_cols=161  Identities=24%  Similarity=0.409  Sum_probs=121.0

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..+..++.  |++  .||+|||+.++ +||||||+||+++.++.+||+|||+++.......  .......++..|+|||
T Consensus       106 ~~~~~~~~~--~l~--~~l~~lH~~~~-~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~y~aPE  178 (270)
T cd05056         106 LASLILYSY--QLS--TALAYLESKRF-VHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY--YKASKGKLPIKWMAPE  178 (270)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCe-eccccChheEEEecCCCeEEccCceeeecccccc--eecCCCCccccccChh
Confidence            333344444  777  99999999999 9999999999999999999999999876543211  1111223456799999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      .+....+    +.++||||||+++||+++ |..||.+.......... ....++.   .+..+++.+.+++.+||..+|.
T Consensus       179 ~~~~~~~----~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~li~~~l~~~P~  250 (270)
T cd05056         179 SINFRRF----TSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRI-ENGERLP---MPPNCPPTLYSLMTKCWAYDPS  250 (270)
T ss_pred             hhccCCC----CchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-HcCCcCC---CCCCCCHHHHHHHHHHcCCChh
Confidence            9877766    899999999999999986 99999765432211111 1111111   2356788999999999999999


Q ss_pred             CCCChhHHHHHHHhhcc
Q psy16840        287 SRPDFPTIRARLKHMKD  303 (413)
Q Consensus       287 ~Rps~~~i~~~l~~~~~  303 (413)
                      +|||+.+++..|..+..
T Consensus       251 ~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         251 KRPRFTELKAQLSDILQ  267 (270)
T ss_pred             hCcCHHHHHHHHHHHHh
Confidence            99999999999987654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.93  E-value=2.1e-26  Score=217.84  Aligned_cols=164  Identities=26%  Similarity=0.391  Sum_probs=121.8

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +.+..+..++.  |++  .||+|||++|+ +||||||+|||++.++.+||+|||+++........ .......++..|+|
T Consensus       131 l~~~~~~~~~~--qi~--~al~~LH~~gi-vH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~a  204 (334)
T cd05100         131 LTFKDLVSCAY--QVA--RGMEYLASQKC-IHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYY-KKTTNGRLPVKWMA  204 (334)
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCe-eccccccceEEEcCCCcEEECCcccceeccccccc-ccccCCCcCceEcC
Confidence            33333444444  777  99999999999 99999999999999999999999998765322111 11122234567999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++.+..+    +.++||||||+++|||++ |..||.+........... ....+.   .+..++..+.+++.+||+.+
T Consensus       205 PE~~~~~~~----~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~l~~li~~cl~~~  276 (334)
T cd05100         205 PEALFDRVY----THQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK-EGHRMD---KPANCTHELYMIMRECWHAV  276 (334)
T ss_pred             HHHhccCCc----CchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCC---CCCCCCHHHHHHHHHHcccC
Confidence            999988766    889999999999999998 888987654222211111 111111   23467889999999999999


Q ss_pred             CCCCCChhHHHHHHHhhcc
Q psy16840        285 PESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~~  303 (413)
                      |++|||+.+++..|..+..
T Consensus       277 p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         277 PSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             hhhCcCHHHHHHHHHHHhh
Confidence            9999999999999987754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.93  E-value=8.4e-27  Score=223.36  Aligned_cols=154  Identities=13%  Similarity=0.120  Sum_probs=115.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++.......  ........||+.|+|||++.+......+
T Consensus       150 qi~--~aL~~LH~~~i-vHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~  224 (370)
T cd05596         150 EVV--LALDAIHSMGF-IHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG--MVRCDTAVGTPDYISPEVLKSQGGDGYY  224 (370)
T ss_pred             HHH--HHHHHHHHCCe-eccCCCHHHEEEcCCCCEEEEeccceeeccCCC--cccCCCCCCCcCeECHHHhccCCCCCCC
Confidence            777  99999999999 999999999999999999999999987653221  1112345789999999998765422234


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC--CCChhHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES--RPDFPTIRA  296 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rps~~~i~~  296 (413)
                      +.++|||||||++|||++|..||.+.+.......+.........+. ...++.++.++|.+||..+|.+  ||++.+++.
T Consensus       225 ~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~  303 (370)
T cd05596         225 GRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPD-DIEISKQAKDLICAFLTDREVRLGRNGVDEIKS  303 (370)
T ss_pred             CCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCC-cCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence            8899999999999999999999987553222222211111111111 1257889999999999999987  999999977


Q ss_pred             HH
Q psy16840        297 RL  298 (413)
Q Consensus       297 ~l  298 (413)
                      +.
T Consensus       304 h~  305 (370)
T cd05596         304 HP  305 (370)
T ss_pred             Cc
Confidence            63

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.93  E-value=8.1e-27  Score=220.08  Aligned_cols=143  Identities=18%  Similarity=0.263  Sum_probs=107.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++++ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+..+    
T Consensus       104 qi~--~~l~~lH~~~i-vH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  173 (329)
T cd05618         104 EIS--LALNYLHERGI-IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---DTTSTFCGTPNYIAPEILRGEDY----  173 (329)
T ss_pred             HHH--HHHHHHHHCCe-eeCCCCHHHEEECCCCCEEEeeCCccccccCCC---CccccccCCccccCHHHHcCCCC----
Confidence            777  99999999999 999999999999999999999999986532111   11234578999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC----CCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC----EEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      +.++|||||||++|+|++|..||.............    ..........++..++..+.+++.+||+.||.+||++
T Consensus       174 ~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         174 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             CCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence            889999999999999999999996432111110000    0000001112345678899999999999999999985

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.93  E-value=1.8e-26  Score=210.05  Aligned_cols=154  Identities=25%  Similarity=0.431  Sum_probs=115.7

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||+|||+.|+ +|+||||+||+++.++.+||+|||.++.......  .......++..|+|||.+
T Consensus       101 ~~~~~~~--~i~--~~l~~lH~~~i-~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~y~~pe~~  173 (256)
T cd05113         101 QLLEMCK--DVC--EGMAYLESKQF-IHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY--TSSVGSKFPVRWSPPEVL  173 (256)
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCe-eccccCcceEEEcCCCCEEECCCccceecCCCce--eecCCCccChhhCCHHHH
Confidence            3344444  777  99999999999 9999999999999999999999999876532211  111122356789999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      .+..+    +.++||||||+++|+|++ |..||...+.......... ..++..   +...++.+.+++.+||+.+|.+|
T Consensus       174 ~~~~~----~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~li~~cl~~~p~~R  245 (256)
T cd05113         174 LYSKF----SSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQ-GLRLYR---PHLASEKVYAIMYSCWHEKAEER  245 (256)
T ss_pred             hcCcc----cchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhc-CCCCCC---CCCCCHHHHHHHHHHcCCCcccC
Confidence            87666    889999999999999998 9999976442221111111 111111   23467899999999999999999


Q ss_pred             CChhHHHHHH
Q psy16840        289 PDFPTIRARL  298 (413)
Q Consensus       289 ps~~~i~~~l  298 (413)
                      |++.+++..|
T Consensus       246 p~~~~ll~~~  255 (256)
T cd05113         246 PTFQQLLSSI  255 (256)
T ss_pred             CCHHHHHHhh
Confidence            9999998765

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.93  E-value=2.8e-27  Score=223.02  Aligned_cols=144  Identities=19%  Similarity=0.238  Sum_probs=112.3

Q ss_pred             CCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      ||+  .||+|||+ +|+ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+..+   
T Consensus       103 qi~--~aL~~lH~~~~i-vHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~---  173 (325)
T cd05594         103 EIV--SALDYLHSEKNV-VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKTFCGTPEYLAPEVLEDNDY---  173 (325)
T ss_pred             HHH--HHHHHHHhcCCE-EecCCCCCeEEECCCCCEEEecCCCCeecCCCC---cccccccCCcccCCHHHHccCCC---
Confidence            777  99999997 788 999999999999999999999999986532111   11234568999999999988766   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----Chh
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DFP  292 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~  292 (413)
                       +.++|||||||++|+|++|..||.+.........+.....     .++..+++++.+++.+||+.||.+|+     ++.
T Consensus       174 -~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~  247 (325)
T cd05594         174 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-----RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAK  247 (325)
T ss_pred             -CCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC-----CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHH
Confidence             8999999999999999999999976442221111111111     12356788999999999999999997     888


Q ss_pred             HHHHH
Q psy16840        293 TIRAR  297 (413)
Q Consensus       293 ~i~~~  297 (413)
                      +++++
T Consensus       248 ~il~h  252 (325)
T cd05594         248 EIMQH  252 (325)
T ss_pred             HHhcC
Confidence            88754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0603|consensus

Probab=99.93  E-value=8.6e-27  Score=221.88  Aligned_cols=143  Identities=20%  Similarity=0.213  Sum_probs=116.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEE-cCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVV-TSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      +|+  .|+.|||++|+ |||||||+|||+ ++.++++|+|||.++.....      ..+.+-|..|.|||++....+   
T Consensus       423 ~lv--~Av~~LH~~gv-vhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~------~~tp~~t~~y~APEvl~~~~y---  490 (612)
T KOG0603|consen  423 ELV--SAVDYLHEQGV-VHRDLKPGNILLDGSAGHLRLTYFGFWSELERS------CDTPALTLQYVAPEVLAIQEY---  490 (612)
T ss_pred             HHH--HHHHHHHhcCe-eecCCChhheeecCCCCcEEEEEechhhhCchh------hcccchhhcccChhhhccCCC---
Confidence            777  99999999999 999999999999 58899999999998875433      223355889999999997776   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                       +.++|+||||++||+|++|+.||......   ..+......+..   ...+++.+++|+.+||+.||.+||++.++...
T Consensus       491 -t~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~~~~~---s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  491 -TEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQMPKF---SECVSDEAKDLLQQLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             -CcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhcCCcc---ccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence             99999999999999999999999764433   111111112221   26789999999999999999999999999877


Q ss_pred             HHh
Q psy16840        298 LKH  300 (413)
Q Consensus       298 l~~  300 (413)
                      -+.
T Consensus       564 ~w~  566 (612)
T KOG0603|consen  564 PWF  566 (612)
T ss_pred             cch
Confidence            655

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.93  E-value=1.3e-26  Score=218.64  Aligned_cols=143  Identities=18%  Similarity=0.273  Sum_probs=107.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++.....   ........||+.|+|||++.+..+    
T Consensus       104 qi~--~~l~~lH~~~i-vH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~----  173 (329)
T cd05588         104 EIS--LALNFLHERGI-IYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP---GDTTSTFCGTPNYIAPEILRGEDY----  173 (329)
T ss_pred             HHH--HHHHHHHHCCe-EecCCCHHHeEECCCCCEEECcCccccccccC---CCccccccCCccccCHHHHcCCCC----
Confidence            777  99999999999 99999999999999999999999998642211   111234578999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC----CCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      +.++|||||||++|+|++|..||............    ...........++..+++.+.+++.+||+.||.+||++
T Consensus       174 ~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~  250 (329)
T cd05588         174 GFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGC  250 (329)
T ss_pred             CCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            88999999999999999999999643321110000    00000001112345678899999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.93  E-value=5.7e-27  Score=221.83  Aligned_cols=141  Identities=16%  Similarity=0.170  Sum_probs=112.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++.....      .....||+.|+|||++.+..+    
T Consensus       139 qi~--~aL~~LH~~~i-vHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~----  205 (340)
T PTZ00426        139 QIV--LIFEYLQSLNI-VYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR------TYTLCGTPEYIAPEILLNVGH----  205 (340)
T ss_pred             HHH--HHHHHHHHCCe-EccCCCHHHEEECCCCCEEEecCCCCeecCCC------cceecCChhhcCHHHHhCCCC----
Confidence            777  99999999999 99999999999999999999999998765321      234578999999999988766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----ChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~  293 (413)
                      +.++|||||||++|||++|..||.+.+.......+.....     .++..+++.+.++|.+||+.||.+|+     ++++
T Consensus       206 ~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~  280 (340)
T PTZ00426        206 GKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII-----YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQN  280 (340)
T ss_pred             CccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC-----CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHH
Confidence            8999999999999999999999986542221111111111     12356788999999999999999995     7777


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++++
T Consensus       281 ~~~h  284 (340)
T PTZ00426        281 VKEH  284 (340)
T ss_pred             HHcC
Confidence            7654

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.93  E-value=9.6e-27  Score=223.46  Aligned_cols=158  Identities=23%  Similarity=0.340  Sum_probs=116.1

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++........  .......+++.|+|||.+.
T Consensus       105 ~~~~~~--qi~--~aL~~LH~~~i-vH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~--~~~~~~~~~~~y~aPE~~~  177 (372)
T cd07853         105 VKVFLY--QIL--RGLKYLHSAGI-LHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES--KHMTQEVVTQYYRAPEILM  177 (372)
T ss_pred             HHHHHH--HHH--HHHHHHHhCCe-eCCCCChHHEEECCCCCEEeccccceeecccCcc--ccCCCCCcCCCcCCHHHHc
Confidence            344455  788  99999999999 9999999999999999999999999876532221  1122345788999999987


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-----------------------CCCCCCC-Cc---c
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED-----------------------CEEPFRP-NL---E  263 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~-----------------------~~~~~~~-~~---~  263 (413)
                      +...   ++.++|||||||++|||++|+.||.+.+.......+                       ......+ ..   .
T Consensus       178 ~~~~---~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (372)
T cd07853         178 GSRH---YTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLY  254 (372)
T ss_pred             CCCC---CCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhc
Confidence            7542   288999999999999999999999765422111000                       0001111 11   1


Q ss_pred             cccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       264 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ......++++.+||.+||+.||.+|||+.+++.+.
T Consensus       255 ~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp  289 (372)
T cd07853         255 TLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP  289 (372)
T ss_pred             ccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence            12245678999999999999999999999998753

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.93  E-value=2.5e-26  Score=208.42  Aligned_cols=149  Identities=26%  Similarity=0.470  Sum_probs=111.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||++++ +||||||+||+++.++.+||+|||++.......... .......+..|+|||.+.+..+    
T Consensus       102 qi~--~~L~~lH~~~i-~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~----  173 (252)
T cd05084         102 NAA--AGMEYLESKHC-IHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAS-TGGMKQIPVKWTAPEALNYGRY----  173 (252)
T ss_pred             HHH--HHHHHHHhCCc-cccccchheEEEcCCCcEEECccccCcccccccccc-cCCCCCCceeecCchhhcCCCC----
Confidence            666  99999999999 999999999999999999999999987543211110 0111123456999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++ |..||............. ...++.   .+..++..+.+++.+||..+|++|||+.++++.
T Consensus       174 ~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~  249 (252)
T cd05084         174 SSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIE-QGVRLP---CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQE  249 (252)
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHH-cCCCCC---CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            889999999999999997 888886543211111111 111111   234678899999999999999999999999988


Q ss_pred             HH
Q psy16840        298 LK  299 (413)
Q Consensus       298 l~  299 (413)
                      |+
T Consensus       250 l~  251 (252)
T cd05084         250 LQ  251 (252)
T ss_pred             Hh
Confidence            75

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.93  E-value=6.8e-26  Score=208.66  Aligned_cols=168  Identities=15%  Similarity=0.306  Sum_probs=125.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||+.++ +|+||+|+||+++.++.++|+|||++.......   .......++..|+|||.+.+...    
T Consensus       109 ~l~--~~l~~lh~~~i-vH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~----  178 (277)
T cd06640         109 EIL--KGLDYLHSEKK-IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---IKRNTFVGTPFWMAPEVIQQSAY----  178 (277)
T ss_pred             HHH--HHHHHHHhCCc-cCcCCChhhEEEcCCCCEEEcccccceeccCCc---cccccccCcccccCHhHhccCCC----
Confidence            777  99999999999 999999999999999999999999987653221   11223457888999999987766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      +.++|+||||+++|||++|..||............ .....   +..+..++..+.+++.+||..+|.+||++.+++...
T Consensus       179 ~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  254 (277)
T cd06640         179 DSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI-PKNNP---PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHK  254 (277)
T ss_pred             ccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh-hcCCC---CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhCh
Confidence            89999999999999999999999764422211111 11111   122346788999999999999999999999998775


Q ss_pred             HhhcccCcccHHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy16840        299 KHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKY  334 (413)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~  334 (413)
                      .-.......              +.++.+++++++|
T Consensus       255 ~~~~~~~~~--------------~~~~~~~~~~~~~  276 (277)
T cd06640         255 FIVKNAKKT--------------SYLTELIDRFKRW  276 (277)
T ss_pred             Hhhhcchhh--------------hHHHHHHHHHHhc
Confidence            544333332              2366666666554

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.93  E-value=2.4e-26  Score=210.42  Aligned_cols=152  Identities=23%  Similarity=0.397  Sum_probs=115.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++++ +||||||+|||++.++.+||+|||++.................++..|+|||.+.+..+    
T Consensus       114 ~i~--~~l~~lH~~~i-~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~----  186 (267)
T cd05066         114 GIA--SGMKYLSDMGY-VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF----  186 (267)
T ss_pred             HHH--HHHHHHHHCCE-eehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCcc----
Confidence            666  99999999999 99999999999999999999999998765432211111112233567999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+||||+++|++++ |..||.+........... ...++..   +..+++.+.+++.+||+.+|.+||++.++++.
T Consensus       187 ~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  262 (267)
T cd05066         187 TSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIE-EGYRLPA---PMDCPAALHQLMLDCWQKDRNERPKFEQIVSI  262 (267)
T ss_pred             CchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHh-CCCcCCC---CCCCCHHHHHHHHHHcccCchhCCCHHHHHHH
Confidence            899999999999999886 999997654222111111 1112211   24578899999999999999999999999998


Q ss_pred             HHhh
Q psy16840        298 LKHM  301 (413)
Q Consensus       298 l~~~  301 (413)
                      |.++
T Consensus       263 l~~~  266 (267)
T cd05066         263 LDKL  266 (267)
T ss_pred             HHhh
Confidence            8764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PTZ00284 protein kinase; Provisional

Probab=99.93  E-value=7.9e-27  Score=230.47  Aligned_cols=153  Identities=10%  Similarity=0.131  Sum_probs=110.2

Q ss_pred             HhhhccccCCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCe----------------EEEEeccccccccccccCCCcc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRW----------------VLQVTDFGLHELRHCAENDSIG  193 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~----------------~~kl~Dfg~a~~~~~~~~~~~~  193 (413)
                      +..++.  ||+  .||+|||+ .|+ |||||||+|||++.++                .+||+|||++....      ..
T Consensus       233 ~~~i~~--qi~--~aL~yLH~~~gI-iHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~------~~  301 (467)
T PTZ00284        233 LAQIIF--QTG--VALDYFHTELHL-MHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER------HS  301 (467)
T ss_pred             HHHHHH--HHH--HHHHHHHhcCCe-ecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCc------cc
Confidence            334455  788  99999997 598 9999999999998664                59999999875321      11


Q ss_pred             cccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC--------------------
Q psy16840        194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED--------------------  253 (413)
Q Consensus       194 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~--------------------  253 (413)
                      .....||+.|+|||++.+..+    +.++|||||||++|||++|+.||.+....+....+                    
T Consensus       302 ~~~~~gt~~Y~APE~~~~~~~----~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~  377 (467)
T PTZ00284        302 RTAIVSTRHYRSPEVVLGLGW----MYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEA  377 (467)
T ss_pred             cccccCCccccCcHHhhcCCC----CcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhH
Confidence            234578999999999988776    89999999999999999999999764421100000                    


Q ss_pred             -----CCCCCCCCcc------------cccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        254 -----CEEPFRPNLE------------LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       254 -----~~~~~~~~~~------------~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                           .....++...            .......+.+.+||.+||..||.+|||+++++++-
T Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp  439 (467)
T PTZ00284        378 RLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHP  439 (467)
T ss_pred             HHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCc
Confidence                 0000000000            00001245678999999999999999999998753

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.93  E-value=1e-25  Score=211.56  Aligned_cols=190  Identities=16%  Similarity=0.336  Sum_probs=132.8

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  |++  .||.|||++++ +||||+|+||+++.++.+||+|||++.....       .....|++.|+|||.
T Consensus       125 ~~~~~i~~--~i~--~~l~~lH~~~i-~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-------~~~~~~~~~y~aPE~  192 (317)
T cd06635         125 VEIAAITH--GAL--QGLAYLHSHNM-IHRDIKAGNILLTEPGQVKLADFGSASIASP-------ANSFVGTPYWMAPEV  192 (317)
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCc-ccCCCCcccEEECCCCCEEEecCCCccccCC-------cccccCCccccChhh
Confidence            33334444  777  99999999999 9999999999999999999999999765321       123457889999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      +..... ..++.++|||||||++|+|++|..||................. +..  ....+++.+.+++.+||+.+|.+|
T Consensus       193 ~~~~~~-~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~l~~li~~~l~~~p~~R  268 (317)
T cd06635         193 ILAMDE-GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-PTL--QSNEWSDYFRNFVDSCLQKIPQDR  268 (317)
T ss_pred             hhcCCC-CCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccC-CCC--CCccccHHHHHHHHHHccCCcccC
Confidence            743111 1128899999999999999999999865432111111111111 111  124567889999999999999999


Q ss_pred             CChhHHHHHHHhhcccCcccHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q psy16840        289 PDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEV  349 (413)
Q Consensus       289 ps~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~le~~~~e~~~~l  349 (413)
                      |++.+++..+..........               ........+++.+++|...-++..++
T Consensus       269 pt~~~il~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (317)
T cd06635         269 PTSEELLKHMFVLRERPETV---------------LIDLIQRTKDAVRELDNLQYRKMKKL  314 (317)
T ss_pred             cCHHHHHhChhhhccCcccc---------------hhhHHHHHHHHHHHHhhhHHHHHHHH
Confidence            99999998876655444322               23344555566666776666555543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.93  E-value=2.5e-26  Score=208.82  Aligned_cols=145  Identities=21%  Similarity=0.264  Sum_probs=113.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||+.|+ +||||||+||+++.++.+||+|||+++.......   ......|++.|+|||++.+...    
T Consensus       109 ~l~--~al~~lH~~~i-~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~----  178 (256)
T cd08529         109 QIL--LGLAHLHSKKI-LHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN---FANTIVGTPYYLSPELCEDKPY----  178 (256)
T ss_pred             HHH--HHHHHHHHCCc-ccCCCCcceEEEeCCCCEEEcccccceeccCccc---hhhccccCccccCHHHhcCCCC----
Confidence            666  99999999999 9999999999999999999999999876543211   1233467889999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+||||+++|+|++|..||...+.......... ...+.   .+..+++.+.+++.+||+.+|++||++.+++..
T Consensus       179 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         179 NEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIR-GVFPP---VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             CCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc-CCCCC---CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            8899999999999999999999976542111111111 11121   223678899999999999999999999998754

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.93  E-value=1.6e-26  Score=216.38  Aligned_cols=151  Identities=17%  Similarity=0.263  Sum_probs=111.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++........   ......+++.|+|||.+.+...   +
T Consensus       112 qi~--~aL~~lH~~~i-vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~---~  182 (309)
T cd07872         112 QIL--RGLAYCHRRKV-LHRDLKPQNLLINERGELKLADFGLARAKSVPTK---TYSNEVVTLWYRPPDVLLGSSE---Y  182 (309)
T ss_pred             HHH--HHHHHHHHCCe-ecCCCCHHHEEECCCCCEEECccccceecCCCcc---ccccccccccccCCHHHhCCCC---C
Confidence            777  99999999999 9999999999999999999999999875432211   1223457889999998865432   2


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-----------------------C-CCCCCCC-cccccCCChHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED-----------------------C-EEPFRPN-LELLRDSCEPFV  273 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~-----------------------~-~~~~~~~-~~~~~~~~~~~l  273 (413)
                      +.++|||||||++|+|++|+.||.+.+..+.....                       . .....+. .......+++++
T Consensus       183 ~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (309)
T cd07872         183 STQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEG  262 (309)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHH
Confidence            88999999999999999999999765421110000                       0 0000000 001123578899


Q ss_pred             HHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        274 LACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       274 ~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      .+++.+||..||.+|||+.+++.+.
T Consensus       263 ~~li~~~L~~dp~~R~t~~e~l~h~  287 (309)
T cd07872         263 IELLTKFLQYESKKRISAEEAMKHA  287 (309)
T ss_pred             HHHHHHhccCChhhCCCHHHHhcCh
Confidence            9999999999999999999998743

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.93  E-value=2.2e-26  Score=211.22  Aligned_cols=150  Identities=15%  Similarity=0.255  Sum_probs=111.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCC-CCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA-PIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~  217 (413)
                      |++  .||+|||++++ +||||||+||+++.++.+||+|||++.......   .......|++.|+|||++.+... ...
T Consensus       119 qi~--~~l~~LH~~~i-vh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~  192 (272)
T cd06637         119 EIL--RGLSHLHQHKV-IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---GRRNTFIGTPYWMAPEVIACDENPDAT  192 (272)
T ss_pred             HHH--HHHHHHHHCCC-ccCCCCHHHEEECCCCCEEEccCCCceeccccc---ccCCcccccccccCHhHhccccCcCCC
Confidence            777  99999999999 999999999999999999999999987643221   11234568899999999864321 123


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ++.++|||||||++|||++|..||.................+   ......++..+.+++.+||..+|.+|||+.+++..
T Consensus       193 ~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         193 YDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAP---RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCC---CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence            488999999999999999999999653321111111111111   11124577899999999999999999999998753

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0611|consensus

Probab=99.93  E-value=1.3e-26  Score=208.77  Aligned_cols=146  Identities=18%  Similarity=0.274  Sum_probs=121.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .|+.|+|++++ +|||||.+|||+|.|+++||+|||++.++....    ...++||++.|.+||++++.+|.   
T Consensus       161 QIv--SAVhYCHknrV-vHRDLKLENILLD~N~NiKIADFGLSNly~~~k----fLqTFCGSPLYASPEIvNG~PY~---  230 (668)
T KOG0611|consen  161 QIV--SAVHYCHKNRV-VHRDLKLENILLDQNNNIKIADFGLSNLYADKK----FLQTFCGSPLYASPEIVNGTPYK---  230 (668)
T ss_pred             HHH--HHHHHHhhccc-eecccchhheeecCCCCeeeeccchhhhhcccc----HHHHhcCCcccCCccccCCCCCC---
Confidence            777  99999999999 999999999999999999999999998775332    35678999999999999999885   


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ++.+|.||||++||.+..|..||++.........+....++.      +..|.+..-||+.||-.||++|.|+.+|..+.
T Consensus       231 GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE------P~~PSdA~gLIRwmLmVNP~RRATieDiAsHW  304 (668)
T KOG0611|consen  231 GPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE------PETPSDASGLIRWMLMVNPERRATIEDIASHW  304 (668)
T ss_pred             CCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC------CCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence            889999999999999999999999865333222333222221      33456788999999999999999999998876


Q ss_pred             Hh
Q psy16840        299 KH  300 (413)
Q Consensus       299 ~~  300 (413)
                      +-
T Consensus       305 Wv  306 (668)
T KOG0611|consen  305 WV  306 (668)
T ss_pred             ee
Confidence            53

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.93  E-value=2e-26  Score=210.91  Aligned_cols=152  Identities=18%  Similarity=0.309  Sum_probs=113.9

Q ss_pred             hhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCC
Q psy16840        133 YLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDT  212 (413)
Q Consensus       133 ~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  212 (413)
                      .++.  |++  .||+|||+.++ +||||||+||+++.++.+||+|||+++................++..|+|||.+.+.
T Consensus       110 ~~~~--qi~--~~l~~LH~~~i-~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  184 (266)
T cd06651         110 KYTR--QIL--EGMSYLHSNMI-VHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGE  184 (266)
T ss_pred             HHHH--HHH--HHHHHHHhCCe-eeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCC
Confidence            3444  777  99999999999 999999999999999999999999987653221111112234578899999999877


Q ss_pred             CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh
Q psy16840        213 HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP  292 (413)
Q Consensus       213 ~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~  292 (413)
                      ..    +.++|||||||++|++++|+.||..................+   .++..+++.+.+++ +||..+|++||+++
T Consensus       185 ~~----~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li-~~~~~~p~~Rp~~~  256 (266)
T cd06651         185 GY----GRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNP---QLPSHISEHARDFL-GCIFVEARHRPSAE  256 (266)
T ss_pred             CC----CchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCC---CCchhcCHHHHHHH-HHhcCChhhCcCHH
Confidence            66    899999999999999999999997643222111111112222   23355778889998 68889999999999


Q ss_pred             HHHHH
Q psy16840        293 TIRAR  297 (413)
Q Consensus       293 ~i~~~  297 (413)
                      +++.+
T Consensus       257 eil~h  261 (266)
T cd06651         257 ELLRH  261 (266)
T ss_pred             HHhcC
Confidence            99753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=2.9e-27  Score=223.34  Aligned_cols=141  Identities=17%  Similarity=0.216  Sum_probs=107.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+...   +
T Consensus       104 qil--~al~~LH~~~i-vHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~---~  174 (330)
T cd05586         104 ELV--LALEHLHKYDI-VYRDLKPENILLDATGHIALCDFGLSKANLTDN---KTTNTFCGTTEYLAPEVLLDEKG---Y  174 (330)
T ss_pred             HHH--HHHHHHHHCCe-EeccCCHHHeEECCCCCEEEecCCcCcCCCCCC---CCccCccCCccccCHHHHcCCCC---C
Confidence            777  99999999999 999999999999999999999999986532211   11234578999999999876432   2


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP  292 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~  292 (413)
                      +.++|||||||++|+|++|..||.+.........+.....+..    ...+++++.+++.+||+.||.+||+..
T Consensus       175 ~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~li~~~L~~~P~~R~~~~  244 (330)
T cd05586         175 TKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFP----KNVLSDEGRQFVKGLLNRNPQHRLGAH  244 (330)
T ss_pred             CCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCC----CccCCHHHHHHHHHHcCCCHHHCCCCC
Confidence            8899999999999999999999976542221111111111111    134688999999999999999999543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.93  E-value=2.9e-26  Score=217.76  Aligned_cols=156  Identities=19%  Similarity=0.319  Sum_probs=114.8

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++.....      .....||+.|+|||+
T Consensus       118 ~~~~~i~~--qi~--~aL~~LH~~~i-vHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~------~~~~~~t~~y~aPE~  186 (343)
T cd07878         118 EHVQFLIY--QLL--RGLKYIHSAGI-IHRDLKPSNVAVNEDCELRILDFGLARQADDE------MTGYVATRWYRAPEI  186 (343)
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCe-ecccCChhhEEECCCCCEEEcCCccceecCCC------cCCccccccccCchH
Confidence            33444555  888  99999999999 99999999999999999999999998764321      234568999999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC---------------CCC-----------CCCCCCc
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE---------------DCE-----------EPFRPNL  262 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~---------------~~~-----------~~~~~~~  262 (413)
                      +.+...   ++.++|||||||++|+|++|..||.+.........               ...           .......
T Consensus       187 ~~~~~~---~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (343)
T cd07878         187 MLNWMH---YNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDL  263 (343)
T ss_pred             hcCCcc---CCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhH
Confidence            876432   28899999999999999999999976431110000               000           0000001


Q ss_pred             ccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      .......++.+.+|+.+||..||.+|||+.+++.+-
T Consensus       264 ~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp  299 (343)
T cd07878         264 KKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHP  299 (343)
T ss_pred             HHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence            111134567889999999999999999999998763

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.93  E-value=4.3e-26  Score=211.24  Aligned_cols=153  Identities=26%  Similarity=0.424  Sum_probs=116.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++++ +||||||+|||+++++.+||+|||+++......... ......++..|+|||.+.+..+    
T Consensus       127 ~l~--~~l~~lH~~~i-~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~~pE~~~~~~~----  198 (288)
T cd05061         127 EIA--DGMAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR-KGGKGLLPVRWMAPESLKDGVF----  198 (288)
T ss_pred             HHH--HHHHHHHhCCC-cCCCCChheEEEcCCCcEEECcCCcccccccccccc-ccCCCcccccccCHHHhccCCC----
Confidence            677  99999999999 999999999999999999999999987543222111 1122244678999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++||+++ |..||.+....+..........    ...+..+++.+.+++.+||+.+|.+|||+.++++.
T Consensus       199 ~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  274 (288)
T cd05061         199 TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY----LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNL  274 (288)
T ss_pred             ChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            899999999999999998 7889876432221111111111    11234567899999999999999999999999998


Q ss_pred             HHhhcc
Q psy16840        298 LKHMKD  303 (413)
Q Consensus       298 l~~~~~  303 (413)
                      |+....
T Consensus       275 l~~~~~  280 (288)
T cd05061         275 LKDDLH  280 (288)
T ss_pred             HHhhcC
Confidence            887543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.93  E-value=2.7e-26  Score=216.94  Aligned_cols=147  Identities=22%  Similarity=0.327  Sum_probs=108.7

Q ss_pred             CCchHHhhHhhhcC-CCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRS-PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~-~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      |++  .||.|||+. ++ +||||||+|||++.++.+||+|||++......     ......|+..|+|||++.+..+   
T Consensus       111 ~l~--~~l~~lH~~~~i-vH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~---  179 (333)
T cd06650         111 AVI--KGLTYLREKHKI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTHY---  179 (333)
T ss_pred             HHH--HHHHHHHhcCCE-EecCCChhhEEEcCCCCEEEeeCCcchhhhhh-----ccccCCCCccccCHHHhcCCCC---
Confidence            677  999999975 67 99999999999999999999999998754321     1233468899999999987766   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC------------CC-------CC-------CCCCCCCc---------
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK------------GE-------DC-------EEPFRPNL---------  262 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~------------~~-------~~-------~~~~~~~~---------  262 (413)
                       +.++|||||||++|++++|+.||.........            ..       ..       ....+|..         
T Consensus       180 -~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (333)
T cd06650         180 -SVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYI  258 (333)
T ss_pred             -CcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHH
Confidence             88999999999999999999999643211000            00       00       00000000         


Q ss_pred             -----ccc-cCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        263 -----ELL-RDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       263 -----~~~-~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                           +.. ....++++.+|+.+||+.||++|||+.+++..
T Consensus       259 ~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h  299 (333)
T cd06650         259 VNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH  299 (333)
T ss_pred             hcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence                 000 01356789999999999999999999999765

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.93  E-value=4e-26  Score=208.11  Aligned_cols=155  Identities=30%  Similarity=0.500  Sum_probs=117.7

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      ...++.  |++  .||+|||+.|+ +||||||+||+++.++.++|+|||++.........  ......++..|+|||.+.
T Consensus       104 ~~~i~~--~i~--~al~~LH~~~i-~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~  176 (260)
T cd05067         104 LIDMAA--QIA--EGMAFIERKNY-IHRDLRAANILVSETLCCKIADFGLARLIEDNEYT--AREGAKFPIKWTAPEAIN  176 (260)
T ss_pred             HHHHHH--HHH--HHHHHHhcCCe-ecccccHHhEEEcCCCCEEEccCcceeecCCCCcc--cccCCcccccccCHHHhc
Confidence            334444  777  99999999999 99999999999999999999999998765422111  112234567899999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +...    +.++||||||+++||+++ |..||.+.+........ ....++.   .+...+.++.+++.+||+.+|++||
T Consensus       177 ~~~~----~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp  248 (260)
T cd05067         177 YGTF----TIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNL-ERGYRMP---RPDNCPEELYELMRLCWKEKPEERP  248 (260)
T ss_pred             cCCc----CcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHH-HcCCCCC---CCCCCCHHHHHHHHHHccCChhhCC
Confidence            7766    889999999999999998 99999765422211111 1111111   2245778999999999999999999


Q ss_pred             ChhHHHHHHHh
Q psy16840        290 DFPTIRARLKH  300 (413)
Q Consensus       290 s~~~i~~~l~~  300 (413)
                      ++++++..|+.
T Consensus       249 ~~~~l~~~l~~  259 (260)
T cd05067         249 TFEYLRSVLED  259 (260)
T ss_pred             CHHHHHHHhhc
Confidence            99999998864

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG3653|consensus

Probab=99.93  E-value=2.7e-26  Score=210.72  Aligned_cols=160  Identities=22%  Similarity=0.319  Sum_probs=113.8

Q ss_pred             HhhHhhhc--------CCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCC
Q psy16840        144 QGMTFLHR--------SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAP  215 (413)
Q Consensus       144 ~gL~yLH~--------~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  215 (413)
                      +||+|||+        +.-|+|||||+.||||.+++++.|+|||+|..+....... .....+||.+|||||++.+.-..
T Consensus       318 rGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~-d~~~qVGT~RYMAPEvLEgainl  396 (534)
T KOG3653|consen  318 RGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQG-DTHGQVGTRRYMAPEVLEGAINL  396 (534)
T ss_pred             HHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCc-chhhhhhhhhhcCHHHHhhhccc
Confidence            99999995        2334999999999999999999999999998876443322 23346899999999999875431


Q ss_pred             C--CCCccchhHHHHHHHHHHHhCCCCCCC--CCCCC---------------CCCCCCCCCCCCCccccc--CCChHHHH
Q psy16840        216 I--RGTQKADVYAFAVILHEIIGRRGPFGG--CGLYE---------------PKGEDCEEPFRPNLELLR--DSCEPFVL  274 (413)
Q Consensus       216 ~--~~~~~~Dv~slG~il~el~~g~~pf~~--~~~~~---------------~~~~~~~~~~~~~~~~~~--~~~~~~l~  274 (413)
                      .  ..-.+.||||+|.++|||+++..-+..  ...+.               ..........||.++...  .....-+.
T Consensus       397 ~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~  476 (534)
T KOG3653|consen  397 QDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLC  476 (534)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHH
Confidence            1  113568999999999999986543321  11011               111223344455444321  22456789


Q ss_pred             HHHHHHhccCCCCCCChhHHHHHHHhhccc
Q psy16840        275 ACMRDCWAEAPESRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       275 ~li~~cl~~~P~~Rps~~~i~~~l~~~~~~  304 (413)
                      +.+..||+.||+.|.|+.-+.+++.++...
T Consensus       477 et~EeCWDhDaeARLTA~Cv~eR~~~l~~~  506 (534)
T KOG3653|consen  477 ETIEECWDHDAEARLTAGCVEERMAELMML  506 (534)
T ss_pred             HHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence            999999999999999999999888877543

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.93  E-value=1.2e-26  Score=218.87  Aligned_cols=144  Identities=17%  Similarity=0.192  Sum_probs=108.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+..+    
T Consensus       104 qi~--~al~~lH~~~i-vHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  173 (327)
T cd05617         104 EIC--IALNFLHERGI-IYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG---DTTSTFCGTPNYIAPEILRGEEY----  173 (327)
T ss_pred             HHH--HHHHHHHHCCe-eccCCCHHHEEEeCCCCEEEeccccceeccCCC---CceecccCCcccCCHHHHCCCCC----
Confidence            777  99999999999 999999999999999999999999986432111   11234578999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC--CCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE--DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP  292 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~  292 (413)
                      +.++|||||||++|+|++|..||...........  ............++..+++.+.+++.+||+.||.+|+++.
T Consensus       174 ~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~  249 (327)
T cd05617         174 GFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQ  249 (327)
T ss_pred             CchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence            8999999999999999999999964321111000  0000000001113356788999999999999999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.93  E-value=4.5e-26  Score=211.91  Aligned_cols=159  Identities=21%  Similarity=0.368  Sum_probs=114.9

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||+|||++|+ +||||||+|||++.++.+||+|||+++......... ......+++.|+|||...
T Consensus       132 ~~~~~~--~i~--~al~~lH~~~i-~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~  205 (296)
T cd05095         132 LIFMAT--QIA--SGMKYLSSLNF-VHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYR-IQGRAVLPIRWMSWESIL  205 (296)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-ecccCChheEEEcCCCCEEeccCcccccccCCccee-ccCcCcCccccCCHHHHh
Confidence            344444  777  99999999999 999999999999999999999999987543221111 112223467899999887


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCC---CCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG--RRGPFGGCGLYEPKGEDC---EEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~--g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      +..+    +.++|||||||++|||++  |..||...+.........   ...........+..+++.+.+++.+||..||
T Consensus       206 ~~~~----~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  281 (296)
T cd05095         206 LGKF----TTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNA  281 (296)
T ss_pred             cCCc----cchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCc
Confidence            7666    899999999999999998  778886543222111000   0000000001124577899999999999999


Q ss_pred             CCCCChhHHHHHHH
Q psy16840        286 ESRPDFPTIRARLK  299 (413)
Q Consensus       286 ~~Rps~~~i~~~l~  299 (413)
                      .+||++.+|.+.|+
T Consensus       282 ~~Rp~~~~i~~~l~  295 (296)
T cd05095         282 KERPSFQEIHATLL  295 (296)
T ss_pred             ccCCCHHHHHHHHh
Confidence            99999999998875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.93  E-value=4.7e-26  Score=207.96  Aligned_cols=146  Identities=21%  Similarity=0.305  Sum_probs=107.6

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeE-------EEEeccccccccccccCCCcccccccCcccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWV-------LQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~-------~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      +..++.  ||+  .||+|||++++ +||||||+|||++.++.       +|++|||++.....       .....++..|
T Consensus       107 ~~~i~~--qi~--~~l~~lH~~~i-vH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~-------~~~~~~~~~y  174 (262)
T cd05077         107 KFKVAK--QLA--SALSYLEDKDL-VHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLS-------RQECVERIPW  174 (262)
T ss_pred             HHHHHH--HHH--HHHHHhhhCCe-ECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccC-------cccccccccc
Confidence            334444  777  99999999999 99999999999986653       89999999764321       1234567889


Q ss_pred             cCcccccC-CCCCCCCCccchhHHHHHHHHHHH-hCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHh
Q psy16840        204 KAPELLRD-THAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCW  281 (413)
Q Consensus       204 ~aPE~~~~-~~~~~~~~~~~Dv~slG~il~el~-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (413)
                      +|||.+.+ ..+    +.++|||||||++|||+ +|..||......+... .......     .....++++.++|.+||
T Consensus       175 ~aPE~~~~~~~~----~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~li~~cl  244 (262)
T cd05077         175 IAPECVEDSKNL----SIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FYEGQCM-----LVTPSCKELADLMTHCM  244 (262)
T ss_pred             cChhhhcCCCCC----CchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HHhcCcc-----CCCCChHHHHHHHHHHc
Confidence            99998864 334    88999999999999998 5888886543211110 0000000     11234678999999999


Q ss_pred             ccCCCCCCChhHHHHHH
Q psy16840        282 AEAPESRPDFPTIRARL  298 (413)
Q Consensus       282 ~~~P~~Rps~~~i~~~l  298 (413)
                      +.||.+||++.+|+..+
T Consensus       245 ~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         245 NYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             CCChhhCcCHHHHHHhc
Confidence            99999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.93  E-value=5.4e-26  Score=209.50  Aligned_cols=155  Identities=24%  Similarity=0.371  Sum_probs=118.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++++ +||||||+||+++.++.+||+|||+++......... ......++..|+|||.+....+    
T Consensus       117 qi~--~~l~~LH~~~i-~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~----  188 (279)
T cd05057         117 QIA--KGMSYLEEKRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEY-HAEGGKVPIKWMALESILHRIY----  188 (279)
T ss_pred             HHH--HHHHHHHhCCE-EecccCcceEEEcCCCeEEECCCcccccccCcccce-ecCCCcccccccCHHHhhcCCc----
Confidence            677  99999999999 999999999999999999999999987654222111 1112223567999999877666    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+||||+++||+++ |..||.+....+....... .....   .+..++..+.+++.+||..+|..||++.++++.
T Consensus       189 ~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~  264 (279)
T cd05057         189 THKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK-GERLP---QPPICTIDVYMVLVKCWMIDAESRPTFKELINE  264 (279)
T ss_pred             CchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhC-CCCCC---CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            889999999999999998 9999976543222211111 11111   124577889999999999999999999999999


Q ss_pred             HHhhcccC
Q psy16840        298 LKHMKDGK  305 (413)
Q Consensus       298 l~~~~~~~  305 (413)
                      |..+....
T Consensus       265 l~~~~~~~  272 (279)
T cd05057         265 FSKMARDP  272 (279)
T ss_pred             HHHHHhCC
Confidence            99876544

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.93  E-value=3.7e-27  Score=221.45  Aligned_cols=146  Identities=21%  Similarity=0.276  Sum_probs=113.2

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||+|||++++ +||||||+|||++.++.+||+|||+++......   .......|++.|+|||.+.
T Consensus       100 ~~~~~~--qi~--~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~  171 (318)
T cd05582         100 VKFYLA--ELA--LALDHLHSLGI-IYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---KKAYSFCGTVEYMAPEVVN  171 (318)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCE-ecCCCCHHHeEECCCCcEEEeeccCCcccCCCC---CceecccCChhhcCHHHHc
Confidence            344444  777  99999999999 999999999999999999999999987543221   1123457899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +..+    +.++|||||||++|||++|+.||...........+....     ..++..+++.+.+++.+||+.||.+||+
T Consensus       172 ~~~~----~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~-----~~~p~~~~~~~~~li~~~l~~~P~~R~~  242 (318)
T cd05582         172 RRGH----TQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAK-----LGMPQFLSPEAQSLLRALFKRNPANRLG  242 (318)
T ss_pred             CCCC----CCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCHHHHHHHHHHhhcCHhHcCC
Confidence            7766    889999999999999999999997644222111111111     1123567889999999999999999999


Q ss_pred             hhH
Q psy16840        291 FPT  293 (413)
Q Consensus       291 ~~~  293 (413)
                      +.+
T Consensus       243 a~~  245 (318)
T cd05582         243 AGP  245 (318)
T ss_pred             CCC
Confidence            766

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=9.5e-26  Score=207.28  Aligned_cols=154  Identities=17%  Similarity=0.324  Sum_probs=117.5

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  |++  .||.|||++++ +||||+|+||++++++.++|+|||++.......   .......+++.|+|||.+
T Consensus        99 ~~~~~~~--ql~--~~l~~lh~~~i-~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---~~~~~~~~~~~y~~PE~~  170 (274)
T cd06609          99 YIAFILR--EVL--LGLEYLHEEGK-IHRDIKAANILLSEEGDVKLADFGVSGQLTSTM---SKRNTFVGTPFWMAPEVI  170 (274)
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCc-ccCCCCHHHEEECCCCCEEEcccccceeecccc---cccccccCCccccChhhh
Confidence            3344444  777  99999999999 999999999999999999999999987764321   112344678889999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .+..+    +.++||||||+++|+|++|..||............ .....+....  ..+++++.+++.+||..+|++||
T Consensus       171 ~~~~~----~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~l~~~l~~~p~~Rp  243 (274)
T cd06609         171 KQSGY----DEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLI-PKNNPPSLEG--NKFSKPFKDFVSLCLNKDPKERP  243 (274)
T ss_pred             ccCCC----CchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHh-hhcCCCCCcc--cccCHHHHHHHHHHhhCChhhCc
Confidence            88776    89999999999999999999999754422211111 1111222211  12788999999999999999999


Q ss_pred             ChhHHHHHH
Q psy16840        290 DFPTIRARL  298 (413)
Q Consensus       290 s~~~i~~~l  298 (413)
                      |+++++..-
T Consensus       244 t~~~il~~~  252 (274)
T cd06609         244 SAKELLKHK  252 (274)
T ss_pred             CHHHHhhCh
Confidence            999998753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.93  E-value=5.6e-26  Score=211.18  Aligned_cols=162  Identities=22%  Similarity=0.347  Sum_probs=116.3

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..+..++.  |++  .||+|||++++ +||||||+||+++.++.+||+|||++........ ........++..|+|||
T Consensus       128 ~~~~~~i~~--~i~--~al~~lH~~~i-~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE  201 (295)
T cd05097         128 IANLLYMAV--QIA--SGMKYLASLNF-VHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY-YRIQGRAVLPIRWMAWE  201 (295)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhcCe-eccccChhhEEEcCCCcEEecccccccccccCcc-eeccCcCcCceeecChh
Confidence            333444444  777  99999999999 9999999999999999999999999875432211 11112234567899999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHh--CCCCCCCCCCCCCCCCC---CCCCCCCCcccccCCChHHHHHHHHHHhc
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIG--RRGPFGGCGLYEPKGED---CEEPFRPNLELLRDSCEPFVLACMRDCWA  282 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~--g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (413)
                      .+.+..+    +.++||||||+++|+|++  +..||...+........   ............+..+++.+.+++.+||+
T Consensus       202 ~~~~~~~----~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  277 (295)
T cd05097         202 SILLGKF----TTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWS  277 (295)
T ss_pred             hhccCCc----CchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcC
Confidence            9887766    899999999999999998  56777654321111000   00000111111234578899999999999


Q ss_pred             cCCCCCCChhHHHHHHH
Q psy16840        283 EAPESRPDFPTIRARLK  299 (413)
Q Consensus       283 ~~P~~Rps~~~i~~~l~  299 (413)
                      .+|++|||+.+|++.|+
T Consensus       278 ~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         278 RDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             CCchhCcCHHHHHHHHh
Confidence            99999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.93  E-value=5.3e-26  Score=208.11  Aligned_cols=152  Identities=16%  Similarity=0.225  Sum_probs=110.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||+.|+ +|+||||+||+++.++.+||+|||++.......   .......|+..|+|||++..... ..+
T Consensus       114 ~i~--~~l~~lH~~~i-~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~-~~~  186 (267)
T cd06645         114 ETL--QGLYYLHSKGK-MHRDIKGANILLTDNGHVKLADFGVSAQITATI---AKRKSFIGTPYWMAPEVAAVERK-GGY  186 (267)
T ss_pred             HHH--HHHHHHHHCCe-ecCCCCHHHEEECCCCCEEECcceeeeEccCcc---cccccccCcccccChhhhccccC-CCC
Confidence            677  99999999999 999999999999999999999999986543211   11234468899999999752211 112


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+|||||++|+|++|..||..................+........++..+.+++.+||+.+|++||++++++++
T Consensus       187 ~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         187 NQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             CchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            7899999999999999999999865432221111111111111111112467889999999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.93  E-value=7.9e-26  Score=206.81  Aligned_cols=151  Identities=21%  Similarity=0.316  Sum_probs=116.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||+.|+ +||||+|+||+++.++.++|+|||++........   ......+++.|+|||.+.+..+    
T Consensus       114 ~l~--~~l~~lh~~~i-~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~----  183 (267)
T cd08224         114 QLC--SALEHMHSKRI-MHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT---AAHSLVGTPYYMSPERIHENGY----  183 (267)
T ss_pred             HHH--HHHHHHHhCCE-ecCCcChhhEEECCCCcEEEeccceeeeccCCCc---ccceecCCccccCHHHhccCCC----
Confidence            777  99999999999 9999999999999999999999999876532211   1223457888999999987766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCC--CCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYE--PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                      +.++||||||+++|++++|..||.......  ...... ....+..+  ...++..+.++|.+||..+|++|||+.+|++
T Consensus       184 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         184 NFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-KCDYPPLP--ADHYSEELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             CchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhh-cCCCCCCC--hhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            889999999999999999999996543110  000111 11111111  1357789999999999999999999999999


Q ss_pred             HHHhhc
Q psy16840        297 RLKHMK  302 (413)
Q Consensus       297 ~l~~~~  302 (413)
                      .|+.+.
T Consensus       261 ~~~~~~  266 (267)
T cd08224         261 VAKEMH  266 (267)
T ss_pred             HHHHhc
Confidence            988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=3e-26  Score=208.99  Aligned_cols=153  Identities=18%  Similarity=0.333  Sum_probs=114.3

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ..++.  |++  .||.|||++++ +||||+|+||+++.++.+||+|||++........   ......++..|+|||.+.+
T Consensus       104 ~~~~~--ql~--~~l~~lh~~~i-~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~y~~Pe~~~~  175 (262)
T cd06613         104 AYVCR--ETL--KGLAYLHETGK-IHRDIKGANILLTEDGDVKLADFGVSAQLTATIA---KRKSFIGTPYWMAPEVAAV  175 (262)
T ss_pred             HHHHH--HHH--HHHHHHHhCCc-eecCCChhhEEECCCCCEEECccccchhhhhhhh---ccccccCCccccCchhhcc
Confidence            34444  777  99999999999 9999999999999999999999999876532211   1223467888999999876


Q ss_pred             C---CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        212 T---HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       212 ~---~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      .   ..    +.++||||||+++|+|++|..||.+................+.........+.++.+++.+||..+|.+|
T Consensus       176 ~~~~~~----~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  251 (262)
T cd06613         176 ERKGGY----DGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKR  251 (262)
T ss_pred             cccCCc----CchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhC
Confidence            5   44    8899999999999999999999976442221111111111121111224567889999999999999999


Q ss_pred             CChhHHHH
Q psy16840        289 PDFPTIRA  296 (413)
Q Consensus       289 ps~~~i~~  296 (413)
                      ||+.+++.
T Consensus       252 pt~~~il~  259 (262)
T cd06613         252 PTATKLLQ  259 (262)
T ss_pred             CCHHHHhc
Confidence            99999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.93  E-value=6.1e-26  Score=205.58  Aligned_cols=148  Identities=26%  Similarity=0.508  Sum_probs=112.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||++|+ +||||||+||+++.++.+||+|||++........  .......++..|+|||++.+...    
T Consensus       101 ~i~--~~l~~lH~~~~-~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~----  171 (250)
T cd05085         101 DAA--AGMAYLESKNC-IHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY--SSSGLKQIPIKWTAPEALNYGRY----  171 (250)
T ss_pred             HHH--HHHHHHHhCCe-eecccChheEEEcCCCeEEECCCccceecccccc--ccCCCCCCcccccCHHHhccCCC----
Confidence            677  99999999999 9999999999999999999999999865432211  11112234567999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++ |..||.+.......... ....+..   .+..++..+.+++.+||+.+|++||++.++++.
T Consensus       172 ~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  247 (250)
T cd05085         172 SSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQV-EKGYRMS---CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE  247 (250)
T ss_pred             CchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH-HcCCCCC---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            889999999999999998 99999765422211111 1111211   234678899999999999999999999999887


Q ss_pred             HH
Q psy16840        298 LK  299 (413)
Q Consensus       298 l~  299 (413)
                      |.
T Consensus       248 l~  249 (250)
T cd05085         248 LA  249 (250)
T ss_pred             hc
Confidence            64

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.93  E-value=2.9e-26  Score=208.36  Aligned_cols=145  Identities=21%  Similarity=0.343  Sum_probs=113.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +|+||||+||+++.++.++|+|||++........   ......|++.|+|||++.+...    
T Consensus       108 ~i~--~al~~lH~~~i-~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~----  177 (255)
T cd08219         108 QMC--LGVQHIHEKRV-LHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA---YACTYVGTPYYVPPEIWENMPY----  177 (255)
T ss_pred             HHH--HHHHHHhhCCc-ccCCCCcceEEECCCCcEEEcccCcceeeccccc---ccccccCCccccCHHHHccCCc----
Confidence            777  99999999999 9999999999999999999999999875532211   1223467889999999987766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+||||+++|+|++|..||...+..............    ..+..++..+.+++.+||+.||++||++.+++..
T Consensus       178 ~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         178 NNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYK----PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCC----CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            89999999999999999999999764422211111111111    1234577889999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0614|consensus

Probab=99.93  E-value=1.2e-26  Score=214.26  Aligned_cols=135  Identities=17%  Similarity=0.284  Sum_probs=114.1

Q ss_pred             HhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccch
Q psy16840        144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKAD  223 (413)
Q Consensus       144 ~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~D  223 (413)
                      +|++|||++|| |.|||||+|++++.+|-+||.|||+|+.+....    .+.+.+|||.|.|||++.+..+    +.++|
T Consensus       531 EAfeYLH~k~i-IYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~----KTwTFcGTpEYVAPEIILnKGH----D~avD  601 (732)
T KOG0614|consen  531 EAFEYLHRKGI-IYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR----KTWTFCGTPEYVAPEIILNKGH----DRAVD  601 (732)
T ss_pred             HHHHHHHhcCc-eeccCChhheeeccCCceEEeehhhHHHhccCC----ceeeecCCcccccchhhhccCc----chhhH
Confidence            89999999999 999999999999999999999999999875433    3567899999999999999988    89999


Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        224 VYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       224 v~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      .||||+++||+++|.+||.+.+.......+......   -.+|..++....+||+++...+|.+|.-
T Consensus       602 yWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~---i~~Pr~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  602 YWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK---IEFPRRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh---hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence            999999999999999999987655544433332211   1234678888999999999999999965

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.93  E-value=4.6e-26  Score=210.29  Aligned_cols=151  Identities=17%  Similarity=0.285  Sum_probs=110.7

Q ss_pred             CCchHHhhHhhhcC-CCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRS-PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~-~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      ||+  .||+|||++ ++ +||||||+||+++.++.+||+|||++.......    ......++..|+|||.+.+......
T Consensus       111 qi~--~~l~~lH~~~~i-~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~  183 (283)
T cd06617         111 SIV--KALEYLHSKLSV-IHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV----AKTIDAGCKPYMAPERINPELNQKG  183 (283)
T ss_pred             HHH--HHHHHHhhcCCe-ecCCCCHHHEEECCCCCEEEeeccccccccccc----ccccccCCccccChhhcCCcccccc
Confidence            666  999999997 88 999999999999999999999999987653211    1122457888999998865322223


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ++.++|+||||+++|+|++|+.||..................+..+  ...+++++.+++.+||..+|.+||++.+++..
T Consensus       184 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  261 (283)
T cd06617         184 YDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLP--AEKFSPEFQDFVNKCLKKNYKERPNYPELLQH  261 (283)
T ss_pred             cCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCC--ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            4889999999999999999999996422110000000111111111  13578899999999999999999999999875


Q ss_pred             H
Q psy16840        298 L  298 (413)
Q Consensus       298 l  298 (413)
                      -
T Consensus       262 ~  262 (283)
T cd06617         262 P  262 (283)
T ss_pred             c
Confidence            3

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.93  E-value=4.9e-26  Score=210.78  Aligned_cols=157  Identities=25%  Similarity=0.414  Sum_probs=116.1

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||.|||++++ +||||||+||+++.++.+||+|||++......... ........+..|+|||.+
T Consensus       131 ~~~~~~~--~i~--~aL~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~  204 (288)
T cd05050         131 EQLCIAK--QVA--AGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-KASENDAIPIRWMPPESI  204 (288)
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCe-ecccccHhheEecCCCceEECccccceecccCccc-cccCCCccChhhcCHHHH
Confidence            3344444  777  99999999999 99999999999999999999999998754322111 111122345679999998


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      .+..+    +.++|||||||++|+|++ |..||.+....+.......... +   ..+..++.++.+++.+||+.+|.+|
T Consensus       205 ~~~~~----~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~l~~li~~~l~~~p~~R  276 (288)
T cd05050         205 FYNRY----TTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNV-L---SCPDNCPLELYNLMRLCWSKLPSDR  276 (288)
T ss_pred             hcCCC----CchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC-C---CCCCCCCHHHHHHHHHHcccCcccC
Confidence            87766    899999999999999997 8888865432221111111111 1   1234678899999999999999999


Q ss_pred             CChhHHHHHHHh
Q psy16840        289 PDFPTIRARLKH  300 (413)
Q Consensus       289 ps~~~i~~~l~~  300 (413)
                      ||+.++++.|++
T Consensus       277 pt~~el~~~l~~  288 (288)
T cd05050         277 PSFASINRILQR  288 (288)
T ss_pred             CCHHHHHHHhhC
Confidence            999999988863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.93  E-value=7.2e-26  Score=210.55  Aligned_cols=152  Identities=17%  Similarity=0.279  Sum_probs=115.6

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ..++.  |++  .||+|||+.|+ +||||||+||+++.++.+||+|||++........   ......+++.|+|||.+.+
T Consensus       119 ~~i~~--ql~--~aL~~LH~~gi-~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~  190 (296)
T cd06654         119 AAVCR--ECL--QALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRSTMVGTPYWMAPEVVTR  190 (296)
T ss_pred             HHHHH--HHH--HHHHHHHHCCc-ccCCCCHHHEEEcCCCCEEECccccchhcccccc---ccCcccCCccccCHHHHcC
Confidence            34444  777  99999999999 9999999999999999999999999875432211   1223467889999999987


Q ss_pred             CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        212 THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       212 ~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      ...    +.++|||||||++|+|++|..||................ .+.. ..+..+++.+.+++.+||..+|.+||++
T Consensus       191 ~~~----~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~  264 (296)
T cd06654         191 KAY----GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG-TPEL-QNPEKLSAIFRDFLNRCLDMDVEKRGSA  264 (296)
T ss_pred             CCC----CccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCC-CCCC-CCccccCHHHHHHHHHHCcCCcccCcCH
Confidence            665    889999999999999999999997654222111111111 1111 1234577889999999999999999999


Q ss_pred             hHHHHH
Q psy16840        292 PTIRAR  297 (413)
Q Consensus       292 ~~i~~~  297 (413)
                      .+++..
T Consensus       265 ~eil~~  270 (296)
T cd06654         265 KELLQH  270 (296)
T ss_pred             HHHhhC
Confidence            999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=2.2e-26  Score=212.85  Aligned_cols=147  Identities=18%  Similarity=0.225  Sum_probs=112.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||+.++ +||||||+||++++++.++|+|||++.......    ......|++.|+|||++.+..+    
T Consensus       110 qi~--~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~----  178 (285)
T cd05605         110 EIT--CGLEDLHRERI-VYRDLKPENILLDDYGHIRISDLGLAVEIPEGE----TIRGRVGTVGYMAPEVVKNERY----  178 (285)
T ss_pred             HHH--HHHHHHHHCCc-EecCCCHHHEEECCCCCEEEeeCCCceecCCCC----ccccccCCCCccCcHHhcCCCC----
Confidence            777  99999999999 999999999999999999999999987643211    1123468899999999987766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----ChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~  293 (413)
                      +.++||||+|+++|++++|..||.+........... ..........+..+++.+.+++.+||..||.+||     ++++
T Consensus       179 ~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~  257 (285)
T cd05605         179 TFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVE-RRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEE  257 (285)
T ss_pred             CccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHH-HHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHH
Confidence            889999999999999999999997644221111000 0011111122356788999999999999999999     7777


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++..
T Consensus       258 l~~~  261 (285)
T cd05605         258 VKAH  261 (285)
T ss_pred             HhcC
Confidence            7654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=7e-26  Score=221.05  Aligned_cols=161  Identities=14%  Similarity=0.146  Sum_probs=113.8

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++........ .......||+.|+||
T Consensus       258 ~~~~~~~i~~--qi~--~aL~yLH~~gI-vHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~-~~~~~~~GT~~Y~AP  331 (461)
T PHA03211        258 GLAQVTAVAR--QLL--SAIDYIHGEGI-IHRDIKTENVLVNGPEDICLGDFGAACFARGSWST-PFHYGIAGTVDTNAP  331 (461)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCE-EECcCCHHHEEECCCCCEEEcccCCceeccccccc-ccccccCCCcCCcCH
Confidence            3444445555  777  99999999999 99999999999999999999999998765332111 112245689999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-------CCCC------CCC---------------
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-------EDCE------EPF---------------  258 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-------~~~~------~~~---------------  258 (413)
                      |++.+..+    +.++|||||||++|||++|..|+..........       .+..      ..+               
T Consensus       332 E~~~~~~~----~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~  407 (461)
T PHA03211        332 EVLAGDPY----TPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHR  407 (461)
T ss_pred             HHHcCCCC----CchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhh
Confidence            99988776    899999999999999999876643221110000       0000      000               


Q ss_pred             -----CCCcc--cc--cCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        259 -----RPNLE--LL--RDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       259 -----~~~~~--~~--~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                           ++...  .+  ....+.++.+||.+||+.||.+|||+.+++++
T Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        408 AARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             hhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence                 00000  00  01345689999999999999999999999875

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.92  E-value=5.1e-26  Score=208.53  Aligned_cols=152  Identities=24%  Similarity=0.412  Sum_probs=113.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCccccc--ccCcccccCcccccCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQ--YYRSLLWKAPELLRDTHAPI  216 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~  216 (413)
                      |++  .||+|||++|+ +||||||+||+++.++.+||+|||++...............  ...+..|+|||.+.+..+  
T Consensus       114 ~l~--~al~~lH~~g~-~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~--  188 (269)
T cd05065         114 GIA--AGMKYLSEMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKF--  188 (269)
T ss_pred             HHH--HHHHHHHHCCE-eecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcc--
Confidence            666  99999999999 99999999999999999999999998765432211111111  112457999999987766  


Q ss_pred             CCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        217 RGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       217 ~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                        +.++|||||||++||+++ |..||...........+. ...+..   .+..++..+.+++.+||..+|.+||++.+++
T Consensus       189 --~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~-~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~  262 (269)
T cd05065         189 --TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE-QDYRLP---PPMDCPTALHQLMLDCWQKDRNARPKFGQIV  262 (269)
T ss_pred             --cchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH-cCCcCC---CcccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence              889999999999999886 999997644222111111 111111   1246788999999999999999999999999


Q ss_pred             HHHHhh
Q psy16840        296 ARLKHM  301 (413)
Q Consensus       296 ~~l~~~  301 (413)
                      ..|+.+
T Consensus       263 ~~l~~~  268 (269)
T cd05065         263 STLDKM  268 (269)
T ss_pred             HHHHhh
Confidence            888754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.92  E-value=5.5e-26  Score=208.65  Aligned_cols=151  Identities=27%  Similarity=0.440  Sum_probs=115.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++++ +||||||+||++++++.+||+|||+++......... ......+++.|++||.+.+...    
T Consensus       121 ~i~--~~l~~lH~~~i-~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~----  192 (273)
T cd05074         121 DIA--SGMEYLSSKNF-IHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYR-QGCASKLPVKWLALESLADNVY----  192 (273)
T ss_pred             HHH--HHHHHHHhCCE-eecccchhhEEEcCCCCEEECcccccccccCCccee-cCCCccCchhhcCHhHHhcCcc----
Confidence            777  99999999999 999999999999999999999999987653222111 1122345678999999987776    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++ |..||.+.............. ...   .+..+++.+.+++.+||+.+|++|||+.+++..
T Consensus       193 ~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         193 TTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN-RLK---QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             chhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC-cCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            889999999999999999 889987644221111111111 111   124577899999999999999999999999999


Q ss_pred             HHhh
Q psy16840        298 LKHM  301 (413)
Q Consensus       298 l~~~  301 (413)
                      |+.+
T Consensus       269 l~~~  272 (273)
T cd05074         269 LELI  272 (273)
T ss_pred             HHhh
Confidence            8765

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.92  E-value=6.6e-27  Score=220.98  Aligned_cols=152  Identities=14%  Similarity=0.144  Sum_probs=111.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCC--CC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA--PI  216 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~  216 (413)
                      ||+  .||.|||+.++ +||||||+|||++.++.+||+|||++........  .......||+.|+|||++.....  ..
T Consensus       110 qi~--~aL~~lH~~~i-~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~  184 (330)
T cd05601         110 ELV--LAIHSVHQMGY-VHRDIKPENVLIDRTGHIKLADFGSAARLTANKM--VNSKLPVGTPDYIAPEVLTTMNGDGKG  184 (330)
T ss_pred             HHH--HHHHHHHHCCe-EcccCchHheEECCCCCEEeccCCCCeECCCCCc--eeeecccCCccccCHHHhccccccccC
Confidence            777  99999999999 9999999999999999999999999876532221  11233468999999999874221  11


Q ss_pred             CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       217 ~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                      .++.++|||||||++|+|++|..||...........+.........+ ....+++++.+|+..||. +|.+||++.+++.
T Consensus       185 ~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         185 TYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFP-EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             CCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCC-CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            23789999999999999999999997654222111111111001111 113578899999999998 9999999999875


Q ss_pred             H
Q psy16840        297 R  297 (413)
Q Consensus       297 ~  297 (413)
                      +
T Consensus       263 h  263 (330)
T cd05601         263 H  263 (330)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0580|consensus

Probab=99.92  E-value=2.2e-26  Score=194.09  Aligned_cols=145  Identities=14%  Similarity=0.163  Sum_probs=121.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|+|.+++ |||||||+|+|++..+..||+|||.+-...     .....+.|||.-|+|||...+..+    
T Consensus       132 q~A--~Al~y~h~k~V-IhRdiKpenlLlg~~~~lkiAdfGwsV~~p-----~~kR~tlcgt~dyl~pEmv~~~~h----  199 (281)
T KOG0580|consen  132 QLA--NALLYCHLKRV-IHRDIKPENLLLGSAGELKIADFGWSVHAP-----SNKRKTLCGTLDYLPPEMVEGRGH----  199 (281)
T ss_pred             HHH--HHHHHhccCCc-ccCCCCHHHhccCCCCCeeccCCCceeecC-----CCCceeeecccccCCHhhcCCCCc----
Confidence            555  89999999999 999999999999999999999999976542     223467799999999999999988    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      +..+|+|++|++.||++.|.+||...+..+....+.....     .+|+.++..+.++|.+|+..+|.+|.+..++++..
T Consensus       200 d~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~-----~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hp  274 (281)
T KOG0580|consen  200 DKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDL-----KFPSTISGGAADLISRLLVKNPIERLALTEVMDHP  274 (281)
T ss_pred             cchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccc-----cCCcccChhHHHHHHHHhccCccccccHHHHhhhH
Confidence            9999999999999999999999987663333333322222     12367889999999999999999999999998876


Q ss_pred             Hh
Q psy16840        299 KH  300 (413)
Q Consensus       299 ~~  300 (413)
                      +-
T Consensus       275 wI  276 (281)
T KOG0580|consen  275 WI  276 (281)
T ss_pred             HH
Confidence            53

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.92  E-value=1.1e-26  Score=218.86  Aligned_cols=143  Identities=19%  Similarity=0.227  Sum_probs=111.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....   ........||+.|+|||++.+..+    
T Consensus       104 qi~--~al~~lH~~gi-vH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~----  173 (325)
T cd05604         104 EIA--SALGYLHSINI-VYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ---SDTTTTFCGTPEYLAPEVIRKQPY----  173 (325)
T ss_pred             HHH--HHHHHHHHCCe-eecCCCHHHeEECCCCCEEEeecCCcccCCCC---CCCcccccCChhhCCHHHHcCCCC----
Confidence            777  99999999999 99999999999999999999999998653211   112234578999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                      +.++|||||||++|+|++|..||.................     ..++..+..+.+++.+|+..+|.+||++.+.+.
T Consensus       174 ~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~  246 (325)
T cd05604         174 DNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL-----VLRPGASLTAWSILEELLEKDRQRRLGAKEDFL  246 (325)
T ss_pred             CCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc-----cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHH
Confidence            8899999999999999999999976543222111111110     112457788999999999999999999864433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.92  E-value=1.1e-25  Score=204.85  Aligned_cols=148  Identities=22%  Similarity=0.311  Sum_probs=109.3

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe-------EEEEeccccccccccccCCCcccccccCcccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW-------VLQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~-------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      +..++.  ||+  .||+|||++++ +||||||+|||++.++       .+||+|||++.....       .....++..|
T Consensus       103 ~~~~~~--~i~--~~l~~LH~~~i-~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~~~~y  170 (259)
T cd05037         103 KLDVAK--QLA--SALHYLEDKKL-VHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS-------REERVERIPW  170 (259)
T ss_pred             HHHHHH--HHH--HHHHHHhhCCe-ecccCccceEEEecCccccCCceeEEeCCCCccccccc-------ccccccCCCc
Confidence            344444  777  99999999999 9999999999999887       899999999876432       1223456789


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhc
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWA  282 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (413)
                      +|||++.+...  .++.++||||||+++|++++ |..||.................      .+......+.+++.+||.
T Consensus       171 ~aPE~~~~~~~--~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~l~  242 (259)
T cd05037         171 IAPECIRNGQA--SLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHR------LPMPDCAELANLINQCWT  242 (259)
T ss_pred             cChhhhcCCCC--CcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCCC------CCCCCchHHHHHHHHHhc
Confidence            99999887621  12899999999999999999 5777766432111111110110      111123789999999999


Q ss_pred             cCCCCCCChhHHHHHH
Q psy16840        283 EAPESRPDFPTIRARL  298 (413)
Q Consensus       283 ~~P~~Rps~~~i~~~l  298 (413)
                      .+|.+|||+.++++.|
T Consensus       243 ~~p~~Rpt~~~il~~l  258 (259)
T cd05037         243 YDPTKRPSFRAILRDL  258 (259)
T ss_pred             cChhhCCCHHHHHHhc
Confidence            9999999999998876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.92  E-value=6.2e-26  Score=206.35  Aligned_cols=145  Identities=19%  Similarity=0.282  Sum_probs=113.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      +++  .||+|||+.|+ +||||||+||+++.++.++|+|||++........   ......+++.|+|||++.+...    
T Consensus       110 ~l~--~~l~~lH~~~i-~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~----  179 (257)
T cd08223         110 QIA--MALQYLHEKHI-LHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD---MASTLIGTPYYMSPELFSNKPY----  179 (257)
T ss_pred             HHH--HHHHHHHhCCe-eccCCCchhEEEecCCcEEEecccceEEecccCC---ccccccCCcCccChhHhcCCCC----
Confidence            666  99999999999 9999999999999999999999999876532211   1233467889999999988766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++|+.||.............. ...+   ..+...++.+.+++.+||+.+|++||++.+++.+
T Consensus       180 ~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         180 NYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE-GKLP---PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             CchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh-cCCC---CCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            8899999999999999999999975432211111111 1111   1235678899999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=9.3e-26  Score=223.92  Aligned_cols=155  Identities=15%  Similarity=0.159  Sum_probs=111.3

Q ss_pred             hhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCC
Q psy16840        133 YLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDT  212 (413)
Q Consensus       133 ~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  212 (413)
                      .++.  ||+  .||.|||++|+ |||||||+|||++.++.+||+|||+++......  ........||+.|+|||++.+.
T Consensus       271 ~i~~--ql~--~aL~yLH~~gI-iHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~  343 (501)
T PHA03210        271 AIMK--QLL--CAVEYIHDKKL-IHRDIKLENIFLNCDGKIVLGDFGTAMPFEKER--EAFDYGWVGTVATNSPEILAGD  343 (501)
T ss_pred             HHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEECCCCCEEEEeCCCceecCccc--ccccccccCCcCCCCchhhcCC
Confidence            3444  888  99999999999 999999999999999999999999997654221  1112345789999999999887


Q ss_pred             CCCCCCCccchhHHHHHHHHHHHhCCCC-CCCCCCCCCCC--------CCCCCCCC------------------C-Cccc
Q psy16840        213 HAPIRGTQKADVYAFAVILHEIIGRRGP-FGGCGLYEPKG--------EDCEEPFR------------------P-NLEL  264 (413)
Q Consensus       213 ~~~~~~~~~~Dv~slG~il~el~~g~~p-f~~~~~~~~~~--------~~~~~~~~------------------~-~~~~  264 (413)
                      .+    +.++|||||||++|||++|..+ |..........        ......+.                  + ..+.
T Consensus       344 ~~----~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~  419 (501)
T PHA03210        344 GY----CEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPP  419 (501)
T ss_pred             CC----CcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhh
Confidence            76    8999999999999999998754 43221110000        00000000                  0 0000


Q ss_pred             --ccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        265 --LRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       265 --~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                        .....+.++.+++.+||..||.+|||+.+++.+.
T Consensus       420 ~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp  455 (501)
T PHA03210        420 LIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALP  455 (501)
T ss_pred             HHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhCh
Confidence              0123566788899999999999999999998754

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.92  E-value=8.9e-26  Score=208.36  Aligned_cols=155  Identities=15%  Similarity=0.274  Sum_probs=114.0

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ..++.  ||+  .||+|||++++ +||||+|+||+++.++.++|+|||++........   ......|++.|+|||.+..
T Consensus       124 ~~~~~--qi~--~al~~LH~~~i-vH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~l~~  195 (282)
T cd06636         124 AYICR--EIL--RGLAHLHAHKV-IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG---RRNTFIGTPYWMAPEVIAC  195 (282)
T ss_pred             HHHHH--HHH--HHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEeeCcchhhhhcccc---CCCcccccccccCHhhcCc
Confidence            34444  777  99999999999 9999999999999999999999999875432111   1234568899999998863


Q ss_pred             CCC-CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        212 THA-PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       212 ~~~-~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      ... ...++.++|||||||++|+|++|..||.............. .  .........+++++.++|.+||..||.+|||
T Consensus       196 ~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~  272 (282)
T cd06636         196 DENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-N--PPPKLKSKKWSKKFIDFIEGCLVKNYLSRPS  272 (282)
T ss_pred             ccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh-C--CCCCCcccccCHHHHHHHHHHhCCChhhCcC
Confidence            211 12337899999999999999999999976432221111111 1  1111122467889999999999999999999


Q ss_pred             hhHHHHH
Q psy16840        291 FPTIRAR  297 (413)
Q Consensus       291 ~~~i~~~  297 (413)
                      +.+++..
T Consensus       273 ~~ell~~  279 (282)
T cd06636         273 TEQLLKH  279 (282)
T ss_pred             HHHHhcC
Confidence            9998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.92  E-value=1.3e-25  Score=204.14  Aligned_cols=153  Identities=17%  Similarity=0.318  Sum_probs=115.4

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||.|||+.++ +||||+|+||+++.++.+||+|||++........   ......++..|+|||.+.
T Consensus       101 ~~~~~~--~l~--~~l~~lh~~~i-~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~~PE~~~  172 (256)
T cd06612         101 IAAILY--QTL--KGLEYLHSNKK-IHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA---KRNTVIGTPFWMAPEVIQ  172 (256)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCc-ccCCCCcceEEECCCCcEEEcccccchhcccCcc---ccccccCCccccCHHHHh
Confidence            334444  677  99999999999 9999999999999999999999999876533211   122345788999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +...    +.++||||||+++|+|++|..||...............  .+.....+..++..+.+++.+||+.+|++|||
T Consensus       173 ~~~~----~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps  246 (256)
T cd06612         173 EIGY----NNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK--PPPTLSDPEKWSPEFNDFVKKCLVKDPEERPS  246 (256)
T ss_pred             cCCC----CchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC--CCCCCCchhhcCHHHHHHHHHHHhcChhhCcC
Confidence            7766    89999999999999999999999764322211111111  11111122456789999999999999999999


Q ss_pred             hhHHHHH
Q psy16840        291 FPTIRAR  297 (413)
Q Consensus       291 ~~~i~~~  297 (413)
                      +.+++..
T Consensus       247 ~~~il~~  253 (256)
T cd06612         247 AIQLLQH  253 (256)
T ss_pred             HHHHhcC
Confidence            9998753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.92  E-value=5.7e-26  Score=210.35  Aligned_cols=150  Identities=15%  Similarity=0.243  Sum_probs=110.7

Q ss_pred             CCchHHhhHhhhcC-CCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRS-PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~-~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      +++  .||+|||+. ++ +||||||+||+++.++.+||+|||++.......    ......|++.|+|||.+.+.. ...
T Consensus       115 ~i~--~~l~~lh~~~~i-~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~-~~~  186 (288)
T cd06616         115 ATV--KALNYLKEELKI-IHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI----AKTRDAGCRPYMAPERIDPSA-RDG  186 (288)
T ss_pred             HHH--HHHHHHhhcCCe-eccCCCHHHEEEccCCcEEEeecchhHHhccCC----ccccccCccCccCHHHhcccc-ccC
Confidence            666  999999974 88 999999999999999999999999987653221    122335788999999987662 012


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCC-CCCCCCCCCCCCCCcc-cccCCChHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLY-EPKGEDCEEPFRPNLE-LLRDSCEPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                      ++.++||||||+++|+|++|+.||...... ....... ....+... .....+++++.+|+.+||+.+|++|||+.+++
T Consensus       187 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~  265 (288)
T cd06616         187 YDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVV-KGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELL  265 (288)
T ss_pred             CcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhc-CCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence            388999999999999999999999754311 0101111 11111111 11235788999999999999999999999998


Q ss_pred             HH
Q psy16840        296 AR  297 (413)
Q Consensus       296 ~~  297 (413)
                      ..
T Consensus       266 ~~  267 (288)
T cd06616         266 EH  267 (288)
T ss_pred             cC
Confidence            65

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.92  E-value=2e-25  Score=205.56  Aligned_cols=152  Identities=17%  Similarity=0.312  Sum_probs=116.3

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||.|||++++ +|+||+|+||+++.++.+||+|||++.......   .......++..|+|||.+.
T Consensus       103 ~~~~~~--~i~--~~l~~lH~~~i-vH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~  174 (277)
T cd06642         103 IATILR--EIL--KGLDYLHSERK-IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---IKRNTFVGTPFWMAPEVIK  174 (277)
T ss_pred             HHHHHH--HHH--HHHHHHhcCCe-eccCCChheEEEeCCCCEEEccccccccccCcc---hhhhcccCcccccCHHHhC
Confidence            334444  777  99999999999 999999999999999999999999987653221   1122345788899999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +..+    +.++||||||+++||+++|..||............ .....+   .....++..+.+++.+||..+|++||+
T Consensus       175 ~~~~----~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~  246 (277)
T cd06642         175 QSAY----DFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI-PKNSPP---TLEGQYSKPFKEFVEACLNKDPRFRPT  246 (277)
T ss_pred             cCCC----chhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhh-hcCCCC---CCCcccCHHHHHHHHHHccCCcccCcC
Confidence            7766    88999999999999999999998754322211111 111111   123457889999999999999999999


Q ss_pred             hhHHHHHH
Q psy16840        291 FPTIRARL  298 (413)
Q Consensus       291 ~~~i~~~l  298 (413)
                      +.+++...
T Consensus       247 ~~~il~~~  254 (277)
T cd06642         247 AKELLKHK  254 (277)
T ss_pred             HHHHHHhH
Confidence            99998753

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.92  E-value=9.1e-26  Score=205.04  Aligned_cols=145  Identities=30%  Similarity=0.571  Sum_probs=113.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||+.|+ +||||||+||+++.++.+||+|||++......      ......+..|+|||.+.+..+    
T Consensus       108 qi~--~al~~lH~~~~-~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~~y~~pe~~~~~~~----  174 (254)
T cd05083         108 DVA--EGMEYLESKKL-VHRDLAARNILVSEDGVAKVSDFGLARVGSMG------VDNSKLPVKWTAPEALKHKKF----  174 (254)
T ss_pred             HHH--HHHHHHHhCCe-eccccCcceEEEcCCCcEEECCCccceecccc------CCCCCCCceecCHHHhccCCc----
Confidence            666  99999999999 99999999999999999999999998653211      111233567999999887766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+||||+++|+|++ |..||............ ....++..   +..+++.+.+++.+||+.+|++||++++++..
T Consensus       175 ~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  250 (254)
T cd05083         175 SSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECV-EKGYRMEP---PEGCPADVYVLMTSCWETEPKKRPSFHKLREK  250 (254)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHH-hCCCCCCC---CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            889999999999999997 99999765432221111 11122221   24678899999999999999999999999988


Q ss_pred             HHh
Q psy16840        298 LKH  300 (413)
Q Consensus       298 l~~  300 (413)
                      |++
T Consensus       251 l~~  253 (254)
T cd05083         251 LEK  253 (254)
T ss_pred             Hcc
Confidence            753

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG1035|consensus

Probab=99.92  E-value=4.3e-26  Score=229.88  Aligned_cols=150  Identities=25%  Similarity=0.377  Sum_probs=108.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccc--------------ccc-CCCcccccccCcccc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRH--------------CAE-NDSIGEHQYYRSLLW  203 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~--------------~~~-~~~~~~~~~~gt~~y  203 (413)
                      +|+  .||.|+|++|+ |||||||.||+++++..|||+|||+|....              ... ......++.+||..|
T Consensus       705 eIl--EGLaYIH~~gi-IHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalY  781 (1351)
T KOG1035|consen  705 EIL--EGLAYIHDQGI-IHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALY  781 (1351)
T ss_pred             HHH--HHHHHHHhCce-eeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeee
Confidence            888  99999999998 999999999999999999999999997621              000 111234567899999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--CCCCCCCCCCcccccCCChHHHHHHHHHHh
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--EDCEEPFRPNLELLRDSCEPFVLACMRDCW  281 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (413)
                      +|||++.+... ..|+.|+|+||||||++||+   .||...  ++...  .....+.-|..+.+...--+.-..+|+.++
T Consensus       782 vAPEll~~~~~-~~Yn~KiDmYSLGIVlFEM~---yPF~Ts--MERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll  855 (1351)
T KOG1035|consen  782 VAPELLSDTSS-NKYNSKIDMYSLGIVLFEML---YPFGTS--MERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLL  855 (1351)
T ss_pred             ecHHHhccccc-ccccchhhhHHHHHHHHHHh---ccCCch--HHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHh
Confidence            99999987663 34599999999999999998   466532  11110  111111111112222333445678999999


Q ss_pred             ccCCCCCCChhHHHHH
Q psy16840        282 AEAPESRPDFPTIRAR  297 (413)
Q Consensus       282 ~~~P~~Rps~~~i~~~  297 (413)
                      +.||.+|||+.+++..
T Consensus       856 ~hdP~kRPtA~eLL~s  871 (1351)
T KOG1035|consen  856 SHDPSKRPTATELLNS  871 (1351)
T ss_pred             cCCCccCCCHHHHhhc
Confidence            9999999999999753

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.92  E-value=9.6e-26  Score=208.40  Aligned_cols=159  Identities=17%  Similarity=0.217  Sum_probs=113.8

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  ||+  .||+|||++++ +||||||+||+++.++.+||+|||++.......   .......+++.|+|||
T Consensus       100 ~~~~~~~~~--qi~--~~L~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE  171 (285)
T cd07861         100 AELVKSYLY--QIL--QGILFCHSRRV-LHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV---RVYTHEVVTLWYRAPE  171 (285)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCe-eecCCCHHHEEEcCCCcEEECcccceeecCCCc---ccccCCcccccccChH
Confidence            333444444  777  99999999999 999999999999999999999999987543221   1112335688899999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-----------C-------------CCCCCCCCCcc
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----------E-------------DCEEPFRPNLE  263 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-----------~-------------~~~~~~~~~~~  263 (413)
                      ++.+...   ++.++|||||||++|+|++|+.||.+........           .             ...........
T Consensus       172 ~~~~~~~---~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (285)
T cd07861         172 VLLGSPR---YSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLR  248 (285)
T ss_pred             HhcCCCC---cCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhH
Confidence            8866432   2789999999999999999999997543110000           0             00000001111


Q ss_pred             cccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       264 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .....+++++.++|.+||..||.+|||+.+++..
T Consensus       249 ~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         249 SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            1123578899999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=1.3e-25  Score=214.25  Aligned_cols=154  Identities=17%  Similarity=0.172  Sum_probs=109.1

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++.....    .......||+.|+|||++.
T Consensus       159 ~~~i~~--qi~--~aL~~LH~~~i-vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~~~~~gt~~y~aPE~~~  229 (357)
T PHA03209        159 ALIIEK--QIL--EGLRYLHAQRI-IHRDVKTENIFINDVDQVCIGDLGAAQFPVVA----PAFLGLAGTVETNAPEVLA  229 (357)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-ecCCCCHHHEEECCCCCEEEecCccccccccC----cccccccccccccCCeecC
Confidence            344444  777  99999999999 99999999999999999999999998753221    1123456899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCC-CCCCCCCCCC---------------CCCCCCC----------------
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPF-GGCGLYEPKG---------------EDCEEPF----------------  258 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf-~~~~~~~~~~---------------~~~~~~~----------------  258 (413)
                      +..+    +.++|||||||++|||+++..|+ ..........               ......+                
T Consensus       230 ~~~~----~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (357)
T PHA03209        230 RDKY----NSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYA  305 (357)
T ss_pred             CCCC----CchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhc
Confidence            8766    89999999999999999865544 3211100000               0000000                


Q ss_pred             ---CCCc---c-cccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        259 ---RPNL---E-LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       259 ---~~~~---~-~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                         +...   . .....++.++.++|.+||+.||.+|||+.+++++
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h  351 (357)
T PHA03209        306 SLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY  351 (357)
T ss_pred             ccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence               0000   0 0012456778889999999999999999999865

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.92  E-value=1.9e-26  Score=216.90  Aligned_cols=139  Identities=19%  Similarity=0.198  Sum_probs=109.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++++ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+..+    
T Consensus       104 qi~--~~L~~lH~~~i-vH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  173 (321)
T cd05603         104 EVA--SAIGYLHSLNI-IYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE---ETTSTFCGTPEYLAPEVLRKEPY----  173 (321)
T ss_pred             HHH--HHHHHHHHCCe-EeccCCHHHeEECCCCCEEEccCCCCccCCCCC---CccccccCCcccCCHHHhcCCCC----
Confidence            777  99999999999 999999999999999999999999986532111   11234568999999999987766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP  292 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~  292 (413)
                      +.++|||||||++|||++|..||.+.+.......+....     ..++...+..+.+++.+||+.||.+||++.
T Consensus       174 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         174 DRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKP-----LQLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             CCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            889999999999999999999997654222211111111     112346778999999999999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.92  E-value=1.2e-25  Score=205.96  Aligned_cols=156  Identities=23%  Similarity=0.360  Sum_probs=109.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCC---C
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA---P  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~  215 (413)
                      ||+  .||+|||++++ +||||||+|||++.++.+||+|||++........ ........++..|+|||++.....   .
T Consensus       107 ~i~--~al~~lH~~~i-~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~  182 (268)
T cd05086         107 EIA--AGVTHMHKHNF-LHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY-IETEDDKCVPLRWLAPELVGEFHGGLIT  182 (268)
T ss_pred             HHH--HHHHHHHHCCe-eccCCccceEEEcCCccEEecccccccccCcchh-hhcccCCcCcccccCchhcccccCcccc
Confidence            777  99999999999 9999999999999999999999999754321111 111223467889999999854221   1


Q ss_pred             CCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCC-CCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhH
Q psy16840        216 IRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDC-EEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPT  293 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~  293 (413)
                      ..++.++||||||+++|||++ |..||......+...... ........+.++...++.+.+++..|| .+|++||++++
T Consensus       183 ~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~  261 (268)
T cd05086         183 AEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEE  261 (268)
T ss_pred             CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHH
Confidence            234789999999999999997 567886543221111111 111111112223457888999999999 68999999999


Q ss_pred             HHHHHH
Q psy16840        294 IRARLK  299 (413)
Q Consensus       294 i~~~l~  299 (413)
                      +++.|.
T Consensus       262 i~~~l~  267 (268)
T cd05086         262 VHRLLT  267 (268)
T ss_pred             HHHHhc
Confidence            988763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.92  E-value=2.6e-26  Score=219.74  Aligned_cols=154  Identities=14%  Similarity=0.140  Sum_probs=112.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++++ +||||||+|||++.++.+||+|||++.......  ........||+.|+|||++.+......+
T Consensus       150 qil--~aL~~LH~~~I-vHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~--~~~~~~~~gt~~Y~aPE~~~~~~~~~~~  224 (370)
T cd05621         150 EVV--LALDAIHSMGL-IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG--MVRCDTAVGTPDYISPEVLKSQGGDGYY  224 (370)
T ss_pred             HHH--HHHHHHHHCCe-EecCCCHHHEEECCCCCEEEEecccceecccCC--ceecccCCCCcccCCHHHHhccCCCCCC
Confidence            777  99999999999 999999999999999999999999987653221  1122355789999999999765422224


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC--CCChhHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES--RPDFPTIRA  296 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rps~~~i~~  296 (413)
                      +.++||||+||++|+|++|..||.+.+.......+.........+. ...+++.+.+++..|+..+|..  ||++.++++
T Consensus       225 ~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~  303 (370)
T cd05621         225 GRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPE-DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ  303 (370)
T ss_pred             CcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCC-cccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence            8899999999999999999999976543222222211111111111 1246889999999999855543  889999887


Q ss_pred             HH
Q psy16840        297 RL  298 (413)
Q Consensus       297 ~l  298 (413)
                      +.
T Consensus       304 hp  305 (370)
T cd05621         304 HP  305 (370)
T ss_pred             Cc
Confidence            63

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.92  E-value=1.5e-25  Score=204.43  Aligned_cols=149  Identities=28%  Similarity=0.486  Sum_probs=114.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||+.|+ +||||||+||+++.++.+||+|||++........  .......++..|+|||.+.....    
T Consensus       110 ~l~--~aL~~lH~~~i-~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~----  180 (260)
T cd05073         110 QIA--EGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVIEDNEY--TAREGAKFPIKWTAPEAINFGSF----  180 (260)
T ss_pred             HHH--HHHHHHHhCCc-cccccCcceEEEcCCCcEEECCCcceeeccCCCc--ccccCCcccccccCHhHhccCCc----
Confidence            777  99999999999 9999999999999999999999999876532211  11122345677999999987665    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+||||+++|++++ |..||.+.......... .......   .+...+.++.+++.+||+.+|++||++.++...
T Consensus       181 ~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~  256 (260)
T cd05073         181 TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-ERGYRMP---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSV  256 (260)
T ss_pred             CccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-hCCCCCC---CcccCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            889999999999999998 89999764422111111 1111111   124577899999999999999999999999988


Q ss_pred             HHh
Q psy16840        298 LKH  300 (413)
Q Consensus       298 l~~  300 (413)
                      |+.
T Consensus       257 L~~  259 (260)
T cd05073         257 LDD  259 (260)
T ss_pred             Hhc
Confidence            864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.92  E-value=3.5e-26  Score=219.12  Aligned_cols=153  Identities=14%  Similarity=0.138  Sum_probs=112.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.......  ........||+.|+|||++.+......+
T Consensus       150 qi~--~aL~~LH~~~i-vHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~~~~~~  224 (371)
T cd05622         150 EVV--LALDAIHSMGF-IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVRCDTAVGTPDYISPEVLKSQGGDGYY  224 (371)
T ss_pred             HHH--HHHHHHHHCCE-EeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC--cccccCcccCccccCHHHHhccCCCccC
Confidence            777  99999999999 999999999999999999999999987653221  1122345789999999999765422234


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC---CCChhHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES---RPDFPTIR  295 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~---Rps~~~i~  295 (413)
                      +.++|||||||++|||++|..||.+.+.......+.........+ ....+++.+.++|..|+. +|..   ||++.+++
T Consensus       225 ~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei~  302 (371)
T cd05622         225 GRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFP-DDNDISKEAKNLICAFLT-DREVRLGRNGVEEIK  302 (371)
T ss_pred             CCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCC-CcCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHHh
Confidence            889999999999999999999998755322222221111111111 113578899999999998 4444   67888887


Q ss_pred             HHH
Q psy16840        296 ARL  298 (413)
Q Consensus       296 ~~l  298 (413)
                      ++.
T Consensus       303 ~h~  305 (371)
T cd05622         303 RHL  305 (371)
T ss_pred             cCc
Confidence            654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=1.3e-25  Score=204.19  Aligned_cols=145  Identities=31%  Similarity=0.576  Sum_probs=113.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||++++ +||||||+||+++.++.+||+|||.++......      ....++..|+|||.+....+    
T Consensus       110 qi~--~~l~~lh~~~i-~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~------~~~~~~~~~~ape~~~~~~~----  176 (256)
T cd05039         110 DVC--EGMEYLEEKNF-VHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ------DSGKLPVKWTAPEALREKKF----  176 (256)
T ss_pred             HHH--HHHHHHHhCCc-cchhcccceEEEeCCCCEEEccccccccccccc------ccCCCcccccCchhhcCCcC----
Confidence            666  99999999999 999999999999999999999999987652211      12234567999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++ |..||............ ....++.   .+..+++.+.+++.+||..+|++|||+.++++.
T Consensus       177 ~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  252 (256)
T cd05039         177 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHV-EKGYRME---APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ  252 (256)
T ss_pred             CcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-hcCCCCC---CccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            889999999999999997 99999764322211111 1111221   234678999999999999999999999999998


Q ss_pred             HHh
Q psy16840        298 LKH  300 (413)
Q Consensus       298 l~~  300 (413)
                      |+.
T Consensus       253 l~~  255 (256)
T cd05039         253 LAL  255 (256)
T ss_pred             Hhc
Confidence            865

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.92  E-value=3.2e-26  Score=215.47  Aligned_cols=139  Identities=21%  Similarity=0.283  Sum_probs=109.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+..+    
T Consensus       109 qi~--~al~~lH~~~i-vHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  178 (323)
T cd05615         109 EIS--VGLFFLHRRGI-IYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG---VTTRTFCGTPDYIAPEIIAYQPY----  178 (323)
T ss_pred             HHH--HHHHHHHHCCe-eccCCCHHHeEECCCCCEEEeccccccccCCCC---ccccCccCCccccCHHHHcCCCC----
Confidence            777  99999999999 999999999999999999999999987532211   12234568999999999988766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP  292 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~  292 (413)
                      +.++|||||||++|+|++|..||.+.........+.....     ..+..+++++.+++.+||+.+|.+|++..
T Consensus       179 ~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~-----~~p~~~~~~~~~li~~~l~~~p~~R~~~~  247 (323)
T cd05615         179 GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV-----SYPKSLSKEAVSICKGLMTKHPSKRLGCG  247 (323)
T ss_pred             CCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----CCCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence            8999999999999999999999976542221111111111     12346788999999999999999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.92  E-value=8.5e-26  Score=208.52  Aligned_cols=159  Identities=17%  Similarity=0.234  Sum_probs=115.1

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||.|||+.|+ +||||||+||+++.++.+||+|||++.......   .......++..|+|||++.
T Consensus       105 ~~~~~~--qi~--~~L~~LH~~~i-~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~  176 (282)
T cd06643         105 IRVVCK--QTL--EALNYLHENKI-IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---QRRDSFIGTPYWMAPEVVM  176 (282)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-eecCCCcccEEEccCCCEEEccccccccccccc---cccccccccccccCHhhcc
Confidence            334444  777  99999999999 999999999999999999999999986543211   1123346788999999985


Q ss_pred             CCCC-CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHA-PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~-~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .... ...++.++|||||||++|+|++|..||.............. ...+.. ..+..++.++.++|.+||+.+|.+||
T Consensus       177 ~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp  254 (282)
T cd06643         177 CETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAK-SEPPTL-AQPSRWSSEFKDFLKKCLEKNVDARW  254 (282)
T ss_pred             ccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhh-cCCCCC-CCccccCHHHHHHHHHHccCChhhCc
Confidence            3221 11237899999999999999999999976442211111111 111111 12345788999999999999999999


Q ss_pred             ChhHHHHHHH
Q psy16840        290 DFPTIRARLK  299 (413)
Q Consensus       290 s~~~i~~~l~  299 (413)
                      ++.+++....
T Consensus       255 ~~~~il~~~~  264 (282)
T cd06643         255 TTTQLLQHPF  264 (282)
T ss_pred             CHHHHhcCCC
Confidence            9999986643

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.92  E-value=2.3e-25  Score=227.59  Aligned_cols=163  Identities=18%  Similarity=0.215  Sum_probs=119.1

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC---------------Ccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND---------------SIGEH  195 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~---------------~~~~~  195 (413)
                      +..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++........               .....
T Consensus       115 iL~I~~--QIa--~AL~yLHs~GI-IHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g  189 (932)
T PRK13184        115 FLSIFH--KIC--ATIEYVHSKGV-LHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPG  189 (932)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCc-cccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCC
Confidence            334444  777  99999999999 99999999999999999999999999765211100               01112


Q ss_pred             cccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHH
Q psy16840        196 QYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLA  275 (413)
Q Consensus       196 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (413)
                      ...||+.|+|||.+.+..+    +.++|||||||++|||++|..||...........  .....|........+++.+.+
T Consensus       190 ~~vGT~~YmAPE~l~g~~~----S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~--~~i~~P~~~~p~~~iP~~L~~  263 (932)
T PRK13184        190 KIVGTPDYMAPERLLGVPA----SESTDIYALGVILYQMLTLSFPYRRKKGRKISYR--DVILSPIEVAPYREIPPFLSQ  263 (932)
T ss_pred             CCCCCCCCCCHHHhcCCCC----CcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhh--hhccChhhccccccCCHHHHH
Confidence            3468999999999988776    8999999999999999999999976332211111  001111110111367889999


Q ss_pred             HHHHHhccCCCCCC-ChhHHHHHHHhhccc
Q psy16840        276 CMRDCWAEAPESRP-DFPTIRARLKHMKDG  304 (413)
Q Consensus       276 li~~cl~~~P~~Rp-s~~~i~~~l~~~~~~  304 (413)
                      ++.+||+.||++|| +++++.+.|+.....
T Consensus       264 LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~  293 (932)
T PRK13184        264 IAMKALAVDPAERYSSVQELKQDLEPHLQG  293 (932)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence            99999999999995 567777777776543

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.92  E-value=4.3e-26  Score=218.18  Aligned_cols=151  Identities=16%  Similarity=0.138  Sum_probs=108.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC----------------------------
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND----------------------------  190 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----------------------------  190 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++........                            
T Consensus       109 qi~--~aL~~lH~~gi-vHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (363)
T cd05628         109 ETV--LAIDSIHQLGF-IHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETW  185 (363)
T ss_pred             HHH--HHHHHHHhCCe-EecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchh
Confidence            777  99999999999 99999999999999999999999998754321100                            


Q ss_pred             ----CcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q psy16840        191 ----SIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR  266 (413)
Q Consensus       191 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  266 (413)
                          .......+||+.|+|||++.+..+    +.++|||||||++|||++|..||.+.........+.........+. .
T Consensus       186 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~----~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~  260 (363)
T cd05628         186 KRNRRQLAFSTVGTPDYIAPEVFMQTGY----NKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPP-E  260 (363)
T ss_pred             hhccccccccccCCccccCHHHHcCCCC----CCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCC-c
Confidence                000123579999999999988776    8999999999999999999999987553322222211111111111 1


Q ss_pred             CCChHHHHHHHHHHhc--cCCCCCCChhHHHHH
Q psy16840        267 DSCEPFVLACMRDCWA--EAPESRPDFPTIRAR  297 (413)
Q Consensus       267 ~~~~~~l~~li~~cl~--~~P~~Rps~~~i~~~  297 (413)
                      ..+++++.+++.+++.  .++..||++++++++
T Consensus       261 ~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         261 VPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             CCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence            2467889999988654  233456899998764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.92  E-value=2e-25  Score=206.24  Aligned_cols=161  Identities=16%  Similarity=0.176  Sum_probs=113.8

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      ++...+..++.  ||+  +||.|||++++ +||||||+||+++.++.+||+|||+++.......   ......+++.|+|
T Consensus        96 ~~~~~~~~~~~--qi~--~al~~LH~~~i-~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~a  167 (284)
T cd07839          96 IDPEIVKSFMF--QLL--KGLAFCHSHNV-LHRDLKPQNLLINKNGELKLADFGLARAFGIPVR---CYSAEVVTLWYRP  167 (284)
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCE-ecCCCCHHHEEEcCCCcEEECccchhhccCCCCC---CcCCCccccCCcC
Confidence            34444445555  788  99999999999 9999999999999999999999999875432211   1123356889999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC-C------------------CCCCCCCCC------
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK-G------------------EDCEEPFRP------  260 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-~------------------~~~~~~~~~------  260 (413)
                      ||++.+...   ++.++|||||||++|+|++|..||......... .                  ........+      
T Consensus       168 PE~~~~~~~---~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
T cd07839         168 PDVLFGAKL---YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATT  244 (284)
T ss_pred             hHHHhCCcc---cCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcc
Confidence            999876542   288999999999999999998886432211000 0                  000000000      


Q ss_pred             CcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       261 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ......+.+++++.+++.+||+.||.+|||+++++..
T Consensus       245 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         245 SLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             hhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence            0011123578899999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.92  E-value=3.9e-26  Score=219.87  Aligned_cols=151  Identities=21%  Similarity=0.219  Sum_probs=109.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC----------------------------
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND----------------------------  190 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----------------------------  190 (413)
                      ||+  .||+|||+.|+ +||||||+|||++.++.+||+|||+++........                            
T Consensus       109 qi~--~aL~~LH~~gi-vHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (381)
T cd05626         109 ELT--LAIESVHKMGF-IHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRC  185 (381)
T ss_pred             HHH--HHHHHHHhCCe-eecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCccccccccccccc
Confidence            777  99999999999 99999999999999999999999997543110000                            


Q ss_pred             ----------------CcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q psy16840        191 ----------------SIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC  254 (413)
Q Consensus       191 ----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~  254 (413)
                                      ........||+.|+|||++.+..+    +.++|||||||++|||++|..||...........+.
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~----~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~  261 (381)
T cd05626         186 GDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGY----TQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVI  261 (381)
T ss_pred             ccccchhhccccccccccccccccCCccccCHHHHcCCCC----CCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHH
Confidence                            000123579999999999987766    899999999999999999999997654322111111


Q ss_pred             CCCCCCCcccccCCChHHHHHHHHH--HhccCCCCCCChhHHHHH
Q psy16840        255 EEPFRPNLELLRDSCEPFVLACMRD--CWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~l~~li~~--cl~~~P~~Rps~~~i~~~  297 (413)
                      ........+ ....+++++.+++.+  |+..+|..||++.+++.+
T Consensus       262 ~~~~~~~~~-~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         262 NWENTLHIP-PQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH  305 (381)
T ss_pred             ccccccCCC-CCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            111111111 113578899999998  445666679999999865

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.92  E-value=7.2e-26  Score=193.96  Aligned_cols=140  Identities=21%  Similarity=0.229  Sum_probs=103.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||+++       ||+|||++.++.+|+  ||+++.....        ...||+.|+|||++.+..+    
T Consensus        25 qi~--~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~--------~~~g~~~y~aPE~~~~~~~----   81 (176)
T smart00750       25 QCL--RALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPE--------QSRVDPYFMAPEVIQGQSY----   81 (176)
T ss_pred             HHH--HHHHHHHhcC-------CcccEeEcCccceee--ccceEeeccc--------cCCCcccccChHHhcCCCC----
Confidence            566  9999999887       999999999999999  9998765321        1257899999999988876    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC---CCCCCCcccccCCChH--HHHHHHHHHhccCCCCCCChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCE---EPFRPNLELLRDSCEP--FVLACMRDCWAEAPESRPDFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~l~~li~~cl~~~P~~Rps~~~  293 (413)
                      +.++|||||||++|||++|+.||..............   ....+.........+.  .+.+++.+||..+|.+||++.+
T Consensus        82 ~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~  161 (176)
T smart00750       82 TEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANH  161 (176)
T ss_pred             cchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHH
Confidence            8999999999999999999999965432111100000   0000000001122333  6999999999999999999999


Q ss_pred             HHHHHHhh
Q psy16840        294 IRARLKHM  301 (413)
Q Consensus       294 i~~~l~~~  301 (413)
                      ++..+..+
T Consensus       162 ll~~~~~~  169 (176)
T smart00750      162 YLAHCRAL  169 (176)
T ss_pred             HHHHHHHH
Confidence            99987655

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.92  E-value=1.5e-25  Score=203.24  Aligned_cols=149  Identities=26%  Similarity=0.498  Sum_probs=112.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      +++  .||+|||++++ +||||||+||+++.++.+||+|||++......... .......++..|+|||.+.+..+    
T Consensus       101 ~~~--~~l~~lH~~~i-~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~----  172 (251)
T cd05041         101 DAA--AGMEYLESKNC-IHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT-VSDGLKQIPIKWTAPEALNYGRY----  172 (251)
T ss_pred             HHH--HHHHHHHhCCE-ehhhcCcceEEEcCCCcEEEeeccccccccCCcce-eccccCcceeccCChHhhccCCC----
Confidence            666  99999999999 99999999999999999999999998754321111 11112233567999999887766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+||||+++|++++ |..||............. ......   .+..++..+.+++.+||..+|.+||++.++++.
T Consensus       173 ~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~  248 (251)
T cd05041         173 TSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE-SGYRMP---APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE  248 (251)
T ss_pred             CcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHh-cCCCCC---CCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            899999999999999998 888887644222111111 111111   124678899999999999999999999999988


Q ss_pred             HH
Q psy16840        298 LK  299 (413)
Q Consensus       298 l~  299 (413)
                      |.
T Consensus       249 l~  250 (251)
T cd05041         249 LQ  250 (251)
T ss_pred             hh
Confidence            75

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.92  E-value=1.1e-25  Score=209.41  Aligned_cols=155  Identities=17%  Similarity=0.292  Sum_probs=116.9

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  +++  .||+|||++|+ +||||||+||+++.++.+||+|||++........   ......++..|+|||.
T Consensus       115 ~~~~~i~~--~l~--~al~~LH~~~i-~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~  186 (296)
T cd06655         115 AQIAAVCR--ECL--QALEFLHANQV-IHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS---KRSTMVGTPYWMAPEV  186 (296)
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEccCccchhcccccc---cCCCcCCCccccCcch
Confidence            33344444  777  99999999999 9999999999999999999999999876432211   1223467889999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      +.+...    +.++|||||||++|++++|..||................ .+.. ..+..+++.+.++|.+||..||.+|
T Consensus       187 ~~~~~~----~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~li~~~l~~dp~~R  260 (296)
T cd06655         187 VTRKAY----GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-TPEL-QNPEKLSPIFRDFLNRCLEMDVEKR  260 (296)
T ss_pred             hcCCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-Cccc-CCcccCCHHHHHHHHHHhhcChhhC
Confidence            987766    889999999999999999999997644221111111111 1111 1234678899999999999999999


Q ss_pred             CChhHHHHH
Q psy16840        289 PDFPTIRAR  297 (413)
Q Consensus       289 ps~~~i~~~  297 (413)
                      |++.+++..
T Consensus       261 pt~~~il~~  269 (296)
T cd06655         261 GSAKELLQH  269 (296)
T ss_pred             CCHHHHhhC
Confidence            999999865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.92  E-value=1.1e-25  Score=204.77  Aligned_cols=146  Identities=16%  Similarity=0.312  Sum_probs=114.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||+.++ +||||+|+||+++.++.+||+|||++........   ......+++.|+|||.+.+...    
T Consensus       109 ~l~--~~l~~lh~~~i-~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~---~~~~~~~~~~y~ape~~~~~~~----  178 (256)
T cd08221         109 QIV--SAVSYIHKAGI-LHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS---MAETVVGTPYYMSPELCQGVKY----  178 (256)
T ss_pred             HHH--HHHHHHHhCCc-cccCCChHhEEEeCCCCEEECcCcceEEcccccc---cccccCCCccccCHhhcCCCCC----
Confidence            666  99999999999 9999999999999999999999999876533221   2234568899999999887765    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      +.++||||||+++|+|++|..||......+...........+    .+..++.++.+++.+||..+|.+||++.++++.+
T Consensus       179 ~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         179 NFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP----VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             CCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC----CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence            889999999999999999999997644222211111111111    1256788999999999999999999999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.92  E-value=1.1e-25  Score=206.06  Aligned_cols=147  Identities=20%  Similarity=0.393  Sum_probs=113.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC---cccccccCcccccCcccccCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS---IGEHQYYRSLLWKAPELLRDTHAP  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~  215 (413)
                      |++  .||+|||++|+ +||||+|+||++++++.+||+|||+++.........   .......|+..|+|||.+.+..+ 
T Consensus       114 ~l~--~~l~~lH~~~i-vH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~-  189 (267)
T cd06628         114 QIL--KGLNYLHNRGI-IHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSY-  189 (267)
T ss_pred             HHH--HHHHHHHhcCc-ccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCC-
Confidence            777  99999999999 999999999999999999999999987664221111   11123457889999999987766 


Q ss_pred             CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        216 IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                         +.++|+||||+++|+|++|..||............. ....+   ..+..++..+.++|.+||+.||.+||++.+++
T Consensus       190 ---~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il  262 (267)
T cd06628         190 ---TRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIG-ENASP---EIPSNISSEAIDFLEKTFEIDHNKRPTAAELL  262 (267)
T ss_pred             ---CchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHh-ccCCC---cCCcccCHHHHHHHHHHccCCchhCcCHHHHh
Confidence               889999999999999999999997643211111111 11122   22356788999999999999999999999987


Q ss_pred             H
Q psy16840        296 A  296 (413)
Q Consensus       296 ~  296 (413)
                      +
T Consensus       263 ~  263 (267)
T cd06628         263 K  263 (267)
T ss_pred             h
Confidence            5

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.92  E-value=1.2e-25  Score=213.01  Aligned_cols=163  Identities=22%  Similarity=0.393  Sum_probs=116.9

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||+|||++|+ +||||||+||+++.++.+||+|||++.................|++.|+|||.+.
T Consensus       108 ~~~i~~--ql~--~aL~~LH~~~i-vH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (336)
T cd07849         108 IQYFLY--QIL--RGLKYIHSANV-LHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIML  182 (336)
T ss_pred             HHHHHH--HHH--HHHHHHHhCCe-eccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhh
Confidence            334444  778  99999999999 9999999999999999999999999876543222222223456789999999875


Q ss_pred             CC-CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC---------------CCCCCCC---------CCCCC--Ccc
Q psy16840        211 DT-HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE---------------PKGEDCE---------EPFRP--NLE  263 (413)
Q Consensus       211 ~~-~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~---------------~~~~~~~---------~~~~~--~~~  263 (413)
                      +. .+    +.++||||||+++|+|++|+.||.+.....               .......         ....+  ...
T Consensus       183 ~~~~~----~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (336)
T cd07849         183 NSKGY----TKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWN  258 (336)
T ss_pred             CCCCC----CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHH
Confidence            53 34    889999999999999999999996532110               0000000         00001  011


Q ss_pred             cccCCChHHHHHHHHHHhccCCCCCCChhHHHHH--HHhhc
Q psy16840        264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR--LKHMK  302 (413)
Q Consensus       264 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~--l~~~~  302 (413)
                      ...+..++++.+++.+||+.+|++|||+.+++.+  ++...
T Consensus       259 ~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         259 KLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             HHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence            1123467889999999999999999999999886  44443

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.92  E-value=2.5e-25  Score=207.06  Aligned_cols=147  Identities=16%  Similarity=0.283  Sum_probs=114.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||+.++ +||||||+|||++.++.+||+|||++........   ......+++.|+|||.+.+...    
T Consensus       123 ~l~--~~L~~LH~~~i-~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~----  192 (297)
T cd06656         123 ECL--QALDFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRSTMVGTPYWMAPEVVTRKAY----  192 (297)
T ss_pred             HHH--HHHHHHHHCCc-ccCCCCHHHEEECCCCCEEECcCccceEccCCcc---CcCcccCCccccCHHHHcCCCC----
Confidence            777  99999999999 9999999999999999999999999876432211   1223467889999999987766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+||||+++|++++|..||.+.............. .+.. ..+...++.+.+++.+||..+|++||++.+++..
T Consensus       193 ~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (297)
T cd06656         193 GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-TPEL-QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH  269 (297)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCC-CCCC-CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            889999999999999999999997644322221111111 1111 1234578889999999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG2052|consensus

Probab=99.92  E-value=4.1e-25  Score=201.51  Aligned_cols=160  Identities=26%  Similarity=0.412  Sum_probs=119.5

Q ss_pred             HhhHhhhc-------CCCcccCCCCCCCeEEcCCeEEEEecccccccccccc-CCCcccccccCcccccCcccccCCCCC
Q psy16840        144 QGMTFLHR-------SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE-NDSIGEHQYYRSLLWKAPELLRDTHAP  215 (413)
Q Consensus       144 ~gL~yLH~-------~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~  215 (413)
                      .||++||-       ++-|.|||||+.||||.+++++-|+|+|+|-...... .-....+..+||-+|||||++...-..
T Consensus       319 sGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~  398 (513)
T KOG2052|consen  319 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINM  398 (513)
T ss_pred             hhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcCh
Confidence            99999993       3334999999999999999999999999987654432 223445677999999999999764321


Q ss_pred             C--CCCccchhHHHHHHHHHHHhC----------CCCCCCCCCCCC-----CCCCCCCCCCCCcccccCCC--hHHHHHH
Q psy16840        216 I--RGTQKADVYAFAVILHEIIGR----------RGPFGGCGLYEP-----KGEDCEEPFRPNLELLRDSC--EPFVLAC  276 (413)
Q Consensus       216 ~--~~~~~~Dv~slG~il~el~~g----------~~pf~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~l~~l  276 (413)
                      .  ..-..+||||||.++||++.+          +.||.+.-..++     ....+....||..+......  -..+..+
T Consensus       399 ~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~kl  478 (513)
T KOG2052|consen  399 KHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKL  478 (513)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHH
Confidence            1  113568999999999999853          468866443333     33456677777776544333  3467889


Q ss_pred             HHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        277 MRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       277 i~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      |+.||..+|..|-|+-.|.+.|.++.+
T Consensus       479 MkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  479 MKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             HHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            999999999999999888888777653

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.92  E-value=1.4e-25  Score=206.79  Aligned_cols=156  Identities=18%  Similarity=0.235  Sum_probs=117.2

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  |++  .||.|||+.|+ +|+||||+|||++.++.+||+|||++......     ......|+..|+|||
T Consensus        94 ~~~~~~~~~--qi~--~~l~~lH~~~i-~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~~~y~aPE  163 (279)
T cd06619          94 EHVLGRIAV--AVV--KGLTYLWSLKI-LHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-----IAKTYVGTNAYMAPE  163 (279)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCE-eeCCCCHHHEEECCCCCEEEeeCCcceecccc-----cccCCCCChhhcCce
Confidence            333444555  788  99999999999 99999999999999999999999998754321     123356889999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC------CCCCCCCCCcccccCCChHHHHHHHHHHh
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE------DCEEPFRPNLELLRDSCEPFVLACMRDCW  281 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (413)
                      ++.+..+    +.++||||||+++|+|++|..||...........      .......+..  .....++++.+++.+||
T Consensus       164 ~~~~~~~----~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l  237 (279)
T cd06619         164 RISGEQY----GIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVL--PVGQFSEKFVHFITQCM  237 (279)
T ss_pred             eecCCCC----CCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCC--CCCcCCHHHHHHHHHHh
Confidence            9987766    8999999999999999999999965321111000      0000011111  11346788999999999


Q ss_pred             ccCCCCCCChhHHHHHHH
Q psy16840        282 AEAPESRPDFPTIRARLK  299 (413)
Q Consensus       282 ~~~P~~Rps~~~i~~~l~  299 (413)
                      +.+|.+||++++++....
T Consensus       238 ~~~P~~Rp~~~eil~~~~  255 (279)
T cd06619         238 RKQPKERPAPENLMDHPF  255 (279)
T ss_pred             hCChhhCCCHHHHhcCcc
Confidence            999999999999987644

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.92  E-value=6e-26  Score=210.87  Aligned_cols=150  Identities=18%  Similarity=0.263  Sum_probs=109.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcC-CeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      ||+  .||.|||++++ +||||||+||+++. ++.+||+|||++.........   .....+++.|+|||.+.+...   
T Consensus       118 qi~--~~L~~LH~~~i-~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~---  188 (295)
T cd07837         118 QLL--KGVAHCHKHGV-MHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKS---YTHEIVTLWYRAPEVLLGSTH---  188 (295)
T ss_pred             HHH--HHHHHHHHCCe-eecCCChHHEEEecCCCeEEEeecccceecCCCccc---cCCcccccCCCChHHhhCCCC---
Confidence            677  99999999999 99999999999998 889999999998754322111   122346788999998865332   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-----------CCC-----------CCCCCC-CcccccCCChHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----------EDC-----------EEPFRP-NLELLRDSCEPFVL  274 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-----------~~~-----------~~~~~~-~~~~~~~~~~~~l~  274 (413)
                      ++.++||||||+++|+|++|..||.+.+......           ...           .....+ ......+.+++.+.
T Consensus       189 ~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (295)
T cd07837         189 YSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGL  268 (295)
T ss_pred             CCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHH
Confidence            2889999999999999999999997643211000           000           000000 11111235788999


Q ss_pred             HHHHHHhccCCCCCCChhHHHHH
Q psy16840        275 ACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       275 ~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ++|.+||..||.+||++.+++..
T Consensus       269 ~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         269 DLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             HHHHHHccCChhhcCCHHHHhcC
Confidence            99999999999999999998753

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0032|consensus

Probab=99.92  E-value=7.6e-26  Score=213.63  Aligned_cols=149  Identities=21%  Similarity=0.228  Sum_probs=122.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCC----eEEEEeccccccccccccCCCcccccccCcccccCcccccCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR----WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA  214 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~----~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  214 (413)
                      ||+  .|++|||+.|+ +||||||+|+|+...    +.+|++|||++.....    .......+||+.|+|||++....+
T Consensus       143 ~il--~av~~lH~~gv-vHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~----~~~~~~~~Gtp~y~APEvl~~~~y  215 (382)
T KOG0032|consen  143 QIL--EAVKYLHSLGV-VHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP----GERLHTIVGTPEYVAPEVLGGRPY  215 (382)
T ss_pred             HHH--HHHHHHHhCCc-eeccCCHHHeeeccccCCCCcEEEeeCCCceEccC----CceEeeecCCccccCchhhcCCCC
Confidence            777  99999999999 999999999999643    5799999999988654    223566799999999999998777


Q ss_pred             CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHH
Q psy16840        215 PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI  294 (413)
Q Consensus       215 ~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i  294 (413)
                          +..+||||+|+++|.|++|..||.+.+.......+....+....+.+ +.++..+++++..|+..||..|+|+.++
T Consensus       216 ----~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w-~~is~~akd~i~~ll~~dp~~R~ta~~~  290 (382)
T KOG0032|consen  216 ----GDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPW-DDISESAKDFIRKLLEFDPRKRLTAAQA  290 (382)
T ss_pred             ----CcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCc-cccCHHHHHHHHHhcccCcccCCCHHHH
Confidence                99999999999999999999999887644444433333333332222 5678999999999999999999999999


Q ss_pred             HHHHH
Q psy16840        295 RARLK  299 (413)
Q Consensus       295 ~~~l~  299 (413)
                      +++.+
T Consensus       291 L~HpW  295 (382)
T KOG0032|consen  291 LQHPW  295 (382)
T ss_pred             hcCcc
Confidence            99765

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.92  E-value=6.8e-26  Score=209.52  Aligned_cols=147  Identities=18%  Similarity=0.240  Sum_probs=111.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||+.++ +||||||+||+++.++.++|+|||++.......    ......|+..|+|||++.+..+    
T Consensus       110 qi~--~~l~~lH~~~i-iH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~----  178 (285)
T cd05630         110 EIC--CGLEDLHQERI-VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----TIKGRVGTVGYMAPEVVKNERY----  178 (285)
T ss_pred             HHH--HHHHHHHhCCE-EeCCCCHHHEEECCCCCEEEeeccceeecCCCc----cccCCCCCccccChHHHcCCCC----
Confidence            777  99999999999 999999999999999999999999986543211    1123468999999999987766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC-----hhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD-----FPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps-----~~~  293 (413)
                      +.++||||||+++|+|++|..||........... ............+..+++++.+++.+||+.||++|||     +.+
T Consensus       179 ~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~  257 (285)
T cd05630         179 TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE-VERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGARE  257 (285)
T ss_pred             CCccccHHHHHHHHHHHhCCCCCCCCCccchHHH-HHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHH
Confidence            8999999999999999999999976431110000 0000000011223567889999999999999999999     777


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++++
T Consensus       258 ~~~h  261 (285)
T cd05630         258 VKEH  261 (285)
T ss_pred             HHcC
Confidence            7754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=1.6e-25  Score=204.14  Aligned_cols=149  Identities=28%  Similarity=0.454  Sum_probs=113.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||++++ +|+||||+||++++++.+||+|||++.........  ......++..|+|||.+.+...    
T Consensus       111 ~i~--~al~~lh~~~i-~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~----  181 (261)
T cd05034         111 QIA--EGMAYLESRNY-IHRDLAARNILVGENLVCKIADFGLARLIEDDEYT--AREGAKFPIKWTAPEAANYGRF----  181 (261)
T ss_pred             HHH--HHHHHHHhCCc-ccCCcchheEEEcCCCCEEECccccceeccchhhh--hhhccCCCccccCHHHhccCCc----
Confidence            777  99999999999 99999999999999999999999998765321111  1112234567999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++ |+.||.+........... ...+..   .+..++.++.+++.+||..+|.+||+++++.+.
T Consensus       182 ~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~  257 (261)
T cd05034         182 TIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVE-RGYRMP---RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSF  257 (261)
T ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCC---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            899999999999999998 999997644222111111 111111   124568899999999999999999999999988


Q ss_pred             HHh
Q psy16840        298 LKH  300 (413)
Q Consensus       298 l~~  300 (413)
                      |+.
T Consensus       258 l~~  260 (261)
T cd05034         258 LED  260 (261)
T ss_pred             Hhc
Confidence            764

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.92  E-value=1.2e-25  Score=205.65  Aligned_cols=148  Identities=16%  Similarity=0.292  Sum_probs=111.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++++ +|+||||+||+++.++.+||+|||++.................|+..|+|||.+.+...    
T Consensus       114 ~l~--~~l~~lH~~~i-~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~----  186 (265)
T cd06652         114 QIL--EGVSYLHSNMI-VHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGY----  186 (265)
T ss_pred             HHH--HHHHHHHhCCE-ecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCC----
Confidence            666  99999999999 99999999999999999999999998754322111112233457889999999987665    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++|+.||..................   +..+...+..+.+++.+||. +|.+||++++++..
T Consensus       187 ~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         187 GRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN---PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             CcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCC---CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence            89999999999999999999999754322111111111111   22234567789999999995 99999999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.92  E-value=2.8e-25  Score=205.48  Aligned_cols=152  Identities=16%  Similarity=0.252  Sum_probs=113.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCC-CCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA-PIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~  217 (413)
                      |++  .||.|||++++ +||||||+||+++.++.+||+|||++.......   .......|++.|+|||.+..... ...
T Consensus       132 ~i~--~~l~~lH~~~i-~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~  205 (286)
T cd06638         132 EAL--MGLQHLHVNKT-IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR---LRRNTSVGTPFWMAPEVIACEQQLDST  205 (286)
T ss_pred             HHH--HHHHHHHhCCc-cccCCCHHhEEECCCCCEEEccCCceeecccCC---CccccccCCCcccChhhhchhhhcccc
Confidence            777  99999999999 999999999999999999999999987653221   11233468899999999864321 112


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ++.++|||||||++|+|++|+.||.............. ...+. ...+..++..+.++|.+||+.+|++|||+.++++.
T Consensus       206 ~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         206 YDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPR-NPPPT-LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             ccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccc-cCCCc-ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            38899999999999999999999976542221111111 11111 11224467889999999999999999999999875


Q ss_pred             H
Q psy16840        298 L  298 (413)
Q Consensus       298 l  298 (413)
                      +
T Consensus       284 ~  284 (286)
T cd06638         284 V  284 (286)
T ss_pred             c
Confidence            4

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=4.1e-26  Score=218.54  Aligned_cols=150  Identities=16%  Similarity=0.174  Sum_probs=110.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC---------------------------
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS---------------------------  191 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~---------------------------  191 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++..........                           
T Consensus       109 qi~--~aL~~lH~~~i-vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (364)
T cd05599         109 ETI--LAIDSIHKLGY-IHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKA  185 (364)
T ss_pred             HHH--HHHHHHHHCCe-EeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccc
Confidence            777  99999999999 999999999999999999999999987542211000                           


Q ss_pred             --------cccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy16840        192 --------IGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE  263 (413)
Q Consensus       192 --------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  263 (413)
                              ......+||+.|+|||++.+..+    +.++|||||||++|||++|..||.+.+.................+
T Consensus       186 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~----~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~  261 (364)
T cd05599         186 ETWKRNRRALAYSTVGTPDYIAPEVFLQTGY----NKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFP  261 (364)
T ss_pred             cchhhcccccccccccCccccCHHHHcCCCC----CCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCC
Confidence                    00113468999999999987776    899999999999999999999997654322111111111111111


Q ss_pred             cccCCChHHHHHHHHHHhccCCCCCCC---hhHHHHH
Q psy16840        264 LLRDSCEPFVLACMRDCWAEAPESRPD---FPTIRAR  297 (413)
Q Consensus       264 ~~~~~~~~~l~~li~~cl~~~P~~Rps---~~~i~~~  297 (413)
                      . ...+++++.++|.+|+. +|.+|++   +.+++.+
T Consensus       262 ~-~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         262 D-EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             C-CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            0 12468899999999996 9999998   7777654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.92  E-value=2.2e-25  Score=203.79  Aligned_cols=161  Identities=18%  Similarity=0.310  Sum_probs=118.7

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC-cccccccCcccccC
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLLWKA  205 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~a  205 (413)
                      +...+..++.  ||+  .||.|||+.|+ +||||+|+||++++++.+||+|||++.......... .......|+..|+|
T Consensus       100 ~~~~~~~~~~--ql~--~al~~lh~~~i-~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~  174 (267)
T cd06610         100 DEAIIATVLK--EVL--KGLEYLHSNGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMA  174 (267)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCe-ecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcC
Confidence            3333444444  777  99999999999 999999999999999999999999987654332211 11233467889999


Q ss_pred             cccccCC-CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccc--cCCChHHHHHHHHHHhc
Q psy16840        206 PELLRDT-HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELL--RDSCEPFVLACMRDCWA  282 (413)
Q Consensus       206 PE~~~~~-~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~  282 (413)
                      ||.+... ..    +.++|+||||+++|+|++|..||...+........... ..+.....  ...+++.+.+++.+||.
T Consensus       175 Pe~~~~~~~~----~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~  249 (267)
T cd06610         175 PEVMEQVHGY----DFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN-DPPSLETGADYKKYSKSFRKMISLCLQ  249 (267)
T ss_pred             hHHHccccCc----CcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC-CCCCcCCccccccccHHHHHHHHHHcC
Confidence            9998776 34    89999999999999999999999765432222111111 11111111  13578899999999999


Q ss_pred             cCCCCCCChhHHHHH
Q psy16840        283 EAPESRPDFPTIRAR  297 (413)
Q Consensus       283 ~~P~~Rps~~~i~~~  297 (413)
                      .||++||++.+++..
T Consensus       250 ~~p~~Rp~~~~ll~~  264 (267)
T cd06610         250 KDPSKRPTAEELLKH  264 (267)
T ss_pred             CChhhCcCHHHHhhC
Confidence            999999999998764

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.92  E-value=1.6e-25  Score=205.10  Aligned_cols=147  Identities=22%  Similarity=0.394  Sum_probs=114.3

Q ss_pred             CCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      |++  .||.|||+ .++ +||||+|+||+++.++.+||+|||++.......    ......|+..|+|||.+.+..+   
T Consensus       121 ~l~--~~l~~lh~~~~i-~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~---  190 (269)
T cd08528         121 QMV--LALRYLHKEKRI-VHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES----KLTSVVGTILYSCPEIVKNEPY---  190 (269)
T ss_pred             HHH--HHHHHhccCCce-eecCCCHHHEEECCCCcEEEecccceeeccccc----ccccccCcccCcChhhhcCCCC---
Confidence            666  99999996 678 999999999999999999999999987654322    2234567889999999987665   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                       +.++||||||+++|++++|..||..................+..   ...+++.+.+++.+||+.||++||++.++.++
T Consensus       191 -~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         191 -GEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLP---EGMYSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             -chHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCC---cccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence             89999999999999999999999654322211111111111111   13567899999999999999999999999887


Q ss_pred             HH
Q psy16840        298 LK  299 (413)
Q Consensus       298 l~  299 (413)
                      +.
T Consensus       267 ~~  268 (269)
T cd08528         267 IS  268 (269)
T ss_pred             hc
Confidence            64

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.92  E-value=1.7e-25  Score=206.55  Aligned_cols=153  Identities=25%  Similarity=0.370  Sum_probs=114.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||++|+ +||||||+||+++.++.+||+|||++.................++..|+|||.+.+...    
T Consensus       117 ~l~--~aL~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~----  189 (284)
T cd05038         117 QIC--KGMDYLGSQRY-IHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKF----  189 (284)
T ss_pred             HHH--HHHHHHHhCCe-ecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCC----
Confidence            677  99999999999 99999999999999999999999998876422211111112234567999999887766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--------------CCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--------------EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      +.++||||||+++|||++|..|+..........              .......+.   ..+..++.++.+++.+||..+
T Consensus       190 ~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~  266 (284)
T cd05038         190 SSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERL---PRPPSCPDEVYDLMKLCWEAE  266 (284)
T ss_pred             CcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcC---CCCccCCHHHHHHHHHHhccC
Confidence            889999999999999999999986532111100              000001111   112457789999999999999


Q ss_pred             CCCCCChhHHHHHHHhh
Q psy16840        285 PESRPDFPTIRARLKHM  301 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~  301 (413)
                      |.+|||+.++++.|+.+
T Consensus       267 p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         267 PQDRPSFADLILIVDRL  283 (284)
T ss_pred             hhhCCCHHHHHHHHhhc
Confidence            99999999999998865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.92  E-value=5.4e-26  Score=214.82  Aligned_cols=154  Identities=13%  Similarity=0.142  Sum_probs=111.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCC-CCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA-PIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~  217 (413)
                      ||+  .||.|||++++ +||||||+|||++.++.+||+|||++.......  ........||+.|+|||++..... ...
T Consensus       110 qi~--~al~~lH~~~i-iHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~  184 (332)
T cd05623         110 EMV--IAIDSVHQLHY-VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--TVQSSVAVGTPDYISPEILQAMEDGKGK  184 (332)
T ss_pred             HHH--HHHHHHHHCCe-EecCCCHHHEEECCCCCEEEeecchheecccCC--cceecccccCccccCHHHHhccccCCCC
Confidence            777  99999999999 999999999999999999999999986543211  111223578999999999863211 012


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC--CCChhHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES--RPDFPTIR  295 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rps~~~i~  295 (413)
                      ++.++|||||||++|||++|+.||...+.......+.....+...+.....+++++.+++.+|+..++..  |+++.+++
T Consensus       185 ~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~  264 (332)
T cd05623         185 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFK  264 (332)
T ss_pred             CCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHh
Confidence            3889999999999999999999998755333222222222222222223467899999999998664444  67888887


Q ss_pred             HH
Q psy16840        296 AR  297 (413)
Q Consensus       296 ~~  297 (413)
                      ++
T Consensus       265 ~h  266 (332)
T cd05623         265 QH  266 (332)
T ss_pred             CC
Confidence            65

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.92  E-value=3.4e-25  Score=206.57  Aligned_cols=151  Identities=17%  Similarity=0.218  Sum_probs=111.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++++ +||||||+||+++.++.+||+|||++........   ......+++.|+|||.+.+...   +
T Consensus       112 qi~--~aL~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~---~  182 (301)
T cd07873         112 QLL--RGLNYCHRRKV-LHRDLKPQNLLINERGELKLADFGLARAKSIPTK---TYSNEVVTLWYRPPDILLGSTD---Y  182 (301)
T ss_pred             HHH--HHHHHHHhCCe-eCCCCCHHHEEECCCCcEEECcCcchhccCCCCC---cccccceeecccCcHHHhCCCC---C
Confidence            777  99999999999 9999999999999999999999999875432211   1123356889999999876432   2


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCC-----------C----CC-----CCCCCCC-----CcccccCCChHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPK-----------G----ED-----CEEPFRP-----NLELLRDSCEPFV  273 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-----------~----~~-----~~~~~~~-----~~~~~~~~~~~~l  273 (413)
                      +.++||||||+++|+|++|+.||.+.+.....           .    ..     ......+     ........+++.+
T Consensus       183 ~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (301)
T cd07873         183 STQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDG  262 (301)
T ss_pred             ccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHH
Confidence            88999999999999999999999764321000           0    00     0000000     0111224578899


Q ss_pred             HHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        274 LACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       274 ~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      .++|.+||..||.+|||+++++..-
T Consensus       263 ~~li~~ml~~dp~~R~t~~eil~h~  287 (301)
T cd07873         263 AELLSKLLQFEGRKRISAEEAMKHP  287 (301)
T ss_pred             HHHHHHHhcCCcccCcCHHHHhcCc
Confidence            9999999999999999999998753

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.92  E-value=2.3e-25  Score=209.00  Aligned_cols=153  Identities=20%  Similarity=0.279  Sum_probs=110.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcC----CeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS----RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA  214 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  214 (413)
                      ||+  .||+|||+.++ +||||||+||+++.    ++.+||+|||++.................+++.|+|||++.+...
T Consensus       116 qi~--~~l~~lH~~~i-~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  192 (316)
T cd07842         116 QIL--NGVHYLHSNWV-LHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARH  192 (316)
T ss_pred             HHH--HHHHHHHhCCE-eeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCC
Confidence            777  99999999999 99999999999999    899999999998765433222222334467889999998876432


Q ss_pred             CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-------------------------------------CCCCCC
Q psy16840        215 PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-------------------------------------EDCEEP  257 (413)
Q Consensus       215 ~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-------------------------------------~~~~~~  257 (413)
                         ++.++||||||+++|+|++|..||.+........                                     ......
T Consensus       193 ---~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (316)
T cd07842         193 ---YTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKT  269 (316)
T ss_pred             ---CCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCC
Confidence               2889999999999999999999997644221000                                     000000


Q ss_pred             CC-CCccc-cc--CCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        258 FR-PNLEL-LR--DSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       258 ~~-~~~~~-~~--~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .. ..... ..  ...+..+.+++.+||..||++|||+.+++.+
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~  313 (316)
T cd07842         270 YPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH  313 (316)
T ss_pred             CCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            00 00000 00  1466789999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0610|consensus

Probab=99.92  E-value=2.4e-25  Score=201.47  Aligned_cols=149  Identities=19%  Similarity=0.274  Sum_probs=120.5

Q ss_pred             cCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccc------------------------------
Q psy16840        138 GDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA------------------------------  187 (413)
Q Consensus       138 ~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~------------------------------  187 (413)
                      ++++  -||+|||-.|| |.|||||+||||.++|++.|+||.++......                              
T Consensus       186 AEvl--~ALEYLHmlGi-vYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~  262 (459)
T KOG0610|consen  186 AEVL--LALEYLHMLGI-VYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRC  262 (459)
T ss_pred             HHHH--HHHHHHHhhce-eeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccch
Confidence            3777  89999999999 99999999999999999999999987432100                              


Q ss_pred             ----c-------------------CCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q psy16840        188 ----E-------------------NDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGC  244 (413)
Q Consensus       188 ----~-------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~  244 (413)
                          .                   .......+.+||-.|+|||++.+..+    +.++|.|+|||++|||++|..||.+.
T Consensus       263 ~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH----gsAVDWWtfGIflYEmLyG~TPFKG~  338 (459)
T KOG0610|consen  263 LSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH----GSAVDWWTFGIFLYEMLYGTTPFKGS  338 (459)
T ss_pred             hccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC----CchhhHHHHHHHHHHHHhCCCCcCCC
Confidence                0                   00011235689999999999999998    99999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC----hhHHHH
Q psy16840        245 GLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD----FPTIRA  296 (413)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps----~~~i~~  296 (413)
                      +..+...++.......+-.   +.++..+++||+++|.+||.+|..    +.+|.+
T Consensus       339 ~~~~Tl~NIv~~~l~Fp~~---~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  339 NNKETLRNIVGQPLKFPEE---PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR  391 (459)
T ss_pred             CchhhHHHHhcCCCcCCCC---CcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence            8777777666655443322   367789999999999999999988    555543

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.92  E-value=4.7e-25  Score=206.20  Aligned_cols=156  Identities=19%  Similarity=0.337  Sum_probs=114.2

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  ||+  .||.|||+.++ +||||+|+||+++.++.+||+|||++......       ....++..|+|||+
T Consensus       115 ~~~~~~~~--ql~--~~L~~LH~~~i-~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-------~~~~~~~~y~aPE~  182 (307)
T cd06607         115 VEIAAICH--GAL--QGLAYLHSHER-IHRDIKAGNILLTEPGTVKLADFGSASLVSPA-------NSFVGTPYWMAPEV  182 (307)
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCc-eecCCCcccEEECCCCCEEEeecCcceecCCC-------CCccCCccccCcee
Confidence            33344444  777  99999999999 99999999999999999999999998654321       23457788999998


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      +.+... ..++.++||||||+++|||++|..||.+........... ....+...  +..++..+.+++.+||+.+|++|
T Consensus       183 ~~~~~~-~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R  258 (307)
T cd06607         183 ILAMDE-GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNDSPTLS--SNDWSDYFRNFVDSCLQKIPQDR  258 (307)
T ss_pred             eeccCC-CCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHh-cCCCCCCC--chhhCHHHHHHHHHHhcCChhhC
Confidence            853211 123889999999999999999999997543211111110 01111111  13467889999999999999999


Q ss_pred             CChhHHHHHHHh
Q psy16840        289 PDFPTIRARLKH  300 (413)
Q Consensus       289 ps~~~i~~~l~~  300 (413)
                      |++.+++....-
T Consensus       259 p~~~~il~~~~~  270 (307)
T cd06607         259 PSSEELLKHRFV  270 (307)
T ss_pred             cCHHHHhcChhh
Confidence            999999876543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.92  E-value=1.8e-25  Score=208.02  Aligned_cols=158  Identities=15%  Similarity=0.226  Sum_probs=118.4

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  |++  .||+|||++++ +||||||+||+++.++.+||+|||++.......   .......|+..|+|||
T Consensus       116 ~~~~~~~~~--qi~--~~L~~LH~~~i-vH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE  187 (297)
T cd06659         116 EEQIATVCE--SVL--QALCYLHSQGV-IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---PKRKSLVGTPYWMAPE  187 (297)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHeEEccCCcEEEeechhHhhccccc---ccccceecCccccCHH
Confidence            333444555  788  99999999999 999999999999999999999999986543221   1123456889999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      .+.+..+    +.++|||||||++|||++|..||............. ... +.........++.+.+++.+||+.+|.+
T Consensus       188 ~~~~~~~----~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~l~~~i~~~l~~~P~~  261 (297)
T cd06659         188 VISRTPY----GTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR-DSP-PPKLKNAHKISPVLRDFLERMLTREPQE  261 (297)
T ss_pred             HHccCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-ccC-CCCccccCCCCHHHHHHHHHHhcCCccc
Confidence            9987766    899999999999999999999997543211111110 111 1111122457789999999999999999


Q ss_pred             CCChhHHHHHHH
Q psy16840        288 RPDFPTIRARLK  299 (413)
Q Consensus       288 Rps~~~i~~~l~  299 (413)
                      ||++.++++.-.
T Consensus       262 Rps~~~ll~~~~  273 (297)
T cd06659         262 RATAQELLDHPF  273 (297)
T ss_pred             CcCHHHHhhChh
Confidence            999999988643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.92  E-value=1.1e-25  Score=208.05  Aligned_cols=152  Identities=17%  Similarity=0.217  Sum_probs=112.8

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      ...++.  |++  .||.|||++++ +||||||+||++++++.+||+|||++.......    ......|+..|+|||.+.
T Consensus       104 ~~~~~~--ql~--~~l~~lH~~~i-iH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~----~~~~~~g~~~~~aPE~~~  174 (285)
T cd05632         104 ALFYAA--EIL--CGLEDLHRENT-VYRDLKPENILLDDYGHIRISDLGLAVKIPEGE----SIRGRVGTVGYMAPEVLN  174 (285)
T ss_pred             HHHHHH--HHH--HHHHHHHhCCe-eecCCCHHHEEECCCCCEEEecCCcceecCCCC----cccCCCCCcCccChHHhc
Confidence            334444  777  99999999999 999999999999999999999999986543211    122346899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +..+    +.++|+||||+++|++++|..||.+............. ........+..+++++.+++..||+.||++||+
T Consensus       175 ~~~~----~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~  249 (285)
T cd05632         175 NQRY----TLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRR-VLETEEVYSAKFSEEAKSICKMLLTKDPKQRLG  249 (285)
T ss_pred             CCCC----CcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh-hhccccccCccCCHHHHHHHHHHccCCHhHcCC
Confidence            7766    88999999999999999999999764321111111000 011111223567889999999999999999999


Q ss_pred             -----hhHHHH
Q psy16840        291 -----FPTIRA  296 (413)
Q Consensus       291 -----~~~i~~  296 (413)
                           +.+++.
T Consensus       250 ~~~~~~~~l~~  260 (285)
T cd05632         250 CQEEGAGEVKR  260 (285)
T ss_pred             CcccChHHHHc
Confidence                 555544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.92  E-value=3.2e-25  Score=205.77  Aligned_cols=161  Identities=17%  Similarity=0.235  Sum_probs=116.1

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      +...+..++.  |++  .||.|||++++ +||||||+||+++.++.+||+|||++.......   .......+++.|+||
T Consensus       108 ~~~~~~~~~~--ql~--~~l~~lH~~~i-~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~y~aP  179 (292)
T cd06644         108 TEPQIQVICR--QML--EALQYLHSMKI-IHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL---QRRDSFIGTPYWMAP  179 (292)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHhcCCe-eecCCCcceEEEcCCCCEEEccCccceeccccc---cccceecCCccccCc
Confidence            3344444555  777  99999999999 999999999999999999999999976532211   112334578899999


Q ss_pred             ccccCCCC-CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHA-PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~-~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |.+.+... ...++.++|||||||++|+|++|..||...+......... ....+.. ..+..++.++.+++.+||..+|
T Consensus       180 E~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~li~~~l~~~p  257 (292)
T cd06644         180 EVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA-KSEPPTL-SQPSKWSMEFRDFLKTALDKHP  257 (292)
T ss_pred             eeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHh-cCCCccC-CCCcccCHHHHHHHHHHhcCCc
Confidence            99864321 1123789999999999999999999997644221111111 1111111 1234677899999999999999


Q ss_pred             CCCCChhHHHHH
Q psy16840        286 ESRPDFPTIRAR  297 (413)
Q Consensus       286 ~~Rps~~~i~~~  297 (413)
                      ++||++.++++.
T Consensus       258 ~~Rp~~~~il~~  269 (292)
T cd06644         258 ETRPSAAQLLEH  269 (292)
T ss_pred             ccCcCHHHHhcC
Confidence            999999999764

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0986|consensus

Probab=99.92  E-value=4.2e-26  Score=208.24  Aligned_cols=143  Identities=19%  Similarity=0.230  Sum_probs=112.8

Q ss_pred             ccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCC
Q psy16840        137 FGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI  216 (413)
Q Consensus       137 ~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  216 (413)
                      .++|+  -||++||+.+| |.|||||+|||+|+.|+++|+|+|+|..+.....    ....+||.+|||||++.+..|  
T Consensus       293 AAEi~--cGLehlH~~~i-VYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~----~~~rvGT~GYMAPEvl~ne~Y--  363 (591)
T KOG0986|consen  293 AAEII--CGLEHLHRRRI-VYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP----IRGRVGTVGYMAPEVLQNEVY--  363 (591)
T ss_pred             HHHHH--hhHHHHHhcce-eeccCChhheeeccCCCeEeeccceEEecCCCCc----cccccCcccccCHHHHcCCcc--
Confidence            44788  89999999999 9999999999999999999999999987643322    234489999999999999987  


Q ss_pred             CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       217 ~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                        +...|.||+||++|||+.|+.||.......... .+...........++.++++++++.+..|.+||.+|.-.
T Consensus       364 --~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~e-Evdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGc  435 (591)
T KOG0986|consen  364 --DFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKRE-EVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGC  435 (591)
T ss_pred             --cCCccHHHHHhHHHHHHcccCchhhhhhhhhHH-HHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence              999999999999999999999996533111110 111111112223457899999999999999999999654

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.92  E-value=3e-25  Score=204.03  Aligned_cols=155  Identities=25%  Similarity=0.394  Sum_probs=115.1

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||+|||+.++ +||||||+||+++.++.++++|||++........  .......++..|+|||.+.
T Consensus       119 ~~~~~~--~l~--~~l~~LH~~~i-~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~  191 (275)
T cd05046         119 KVALCT--QIA--LGMDHLSNARF-VHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEY--YKLRNALIPLRWLAPEAVQ  191 (275)
T ss_pred             HHHHHH--HHH--HHHHHhhhcCc-ccCcCccceEEEeCCCcEEEcccccccccCcccc--cccCCceeEEeecChhhhc
Confidence            334444  777  99999999999 9999999999999999999999999865422211  1122334577899999988


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +...    +.++||||||+++|++++ |..||...................   ..+..++..+.+++.+||+.+|.+||
T Consensus       192 ~~~~----~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~i~~~l~~~p~~Rp  264 (275)
T cd05046         192 EDDF----STKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLEL---PVPEGCPSRLYKLMTRCWAVNPKDRP  264 (275)
T ss_pred             cCCC----CchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCC---CCCCCCCHHHHHHHHHHcCCCcccCC
Confidence            7765    889999999999999998 788986533211111111111111   11246788999999999999999999


Q ss_pred             ChhHHHHHHH
Q psy16840        290 DFPTIRARLK  299 (413)
Q Consensus       290 s~~~i~~~l~  299 (413)
                      |+.+++..|.
T Consensus       265 ~~~~~l~~l~  274 (275)
T cd05046         265 SFSELVSALG  274 (275)
T ss_pred             CHHHHHHHhc
Confidence            9999998875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.92  E-value=3.2e-25  Score=204.50  Aligned_cols=148  Identities=20%  Similarity=0.263  Sum_probs=108.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||+.++ +||||+|+||+++. +.+||+|||++........    .....++..|+|||.+.....   +
T Consensus       108 qi~--~~L~~LH~~~i-~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~---~  176 (282)
T cd07831         108 QLL--KSLDHMHRNGI-FHRDIKPENILIKD-DILKLADFGSCRGIYSKPP----YTEYISTRWYRAPECLLTDGY---Y  176 (282)
T ss_pred             HHH--HHHHHHHHCCc-eecccCHHHEEEcC-CCeEEEecccccccccCCC----cCCCCCCcccCChhHhhcCCC---C
Confidence            666  99999999999 99999999999999 9999999999876532211    123457889999997754332   2


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--------------------CCCCCCCC----CCcccccCCChHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--------------------EDCEEPFR----PNLELLRDSCEPFVL  274 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--------------------~~~~~~~~----~~~~~~~~~~~~~l~  274 (413)
                      +.++|||||||++|||++|..||.+.+..+...                    ........    .........++..+.
T Consensus       177 ~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (282)
T cd07831         177 GPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGL  256 (282)
T ss_pred             CcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHH
Confidence            889999999999999999999997643211000                    00000000    001112235688999


Q ss_pred             HHHHHHhccCCCCCCChhHHHHH
Q psy16840        275 ACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       275 ~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ++|.+||..+|++||++.+++..
T Consensus       257 ~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         257 DLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             HHHHHHhccCcccccCHHHHhhC
Confidence            99999999999999999998764

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.92  E-value=1.3e-25  Score=208.42  Aligned_cols=153  Identities=14%  Similarity=0.273  Sum_probs=115.1

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||+|||++++ +||||||+||+++.++.+||+|||++.......   .......|+..|+|||.+.
T Consensus       120 ~~~~~~--qi~--~~l~~LH~~~i-vH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~  191 (292)
T cd06658         120 IATVCL--SVL--RALSYLHNQGV-IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV---PKRKSLVGTPYWMAPEVIS  191 (292)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCE-eecCCCHHHEEEcCCCCEEEccCcchhhccccc---ccCceeecCccccCHHHHc
Confidence            334444  777  99999999999 999999999999999999999999986543221   1123346789999999997


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +..+    +.++||||||+++||+++|..||............ .....+... .....++.+.+++.+||..||.+|||
T Consensus       192 ~~~~----~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt  265 (292)
T cd06658         192 RLPY----GTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI-RDNLPPRVK-DSHKVSSVLRGFLDLMLVREPSQRAT  265 (292)
T ss_pred             cCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhcCCCccc-cccccCHHHHHHHHHHccCChhHCcC
Confidence            7666    88999999999999999999999754321111100 011111111 11346788999999999999999999


Q ss_pred             hhHHHHH
Q psy16840        291 FPTIRAR  297 (413)
Q Consensus       291 ~~~i~~~  297 (413)
                      +.++++.
T Consensus       266 ~~~il~~  272 (292)
T cd06658         266 AQELLQH  272 (292)
T ss_pred             HHHHhhC
Confidence            9999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.92  E-value=3.2e-25  Score=203.87  Aligned_cols=141  Identities=21%  Similarity=0.305  Sum_probs=104.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe-------EEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW-------VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~-------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ||+  .||+|||++++ +||||||+|||++..+       .+|++|||++.....       .....++..|+|||.+.+
T Consensus       125 qi~--~~l~~lH~~~i-iH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~-------~~~~~~~~~~~aPe~~~~  194 (274)
T cd05076         125 QLA--SALSYLEDKNL-VHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS-------REERVERIPWIAPECVPG  194 (274)
T ss_pred             HHH--HHHHHHHcCCc-cCCCCCcccEEEeccCcccCccceeeecCCcccccccc-------ccccccCCcccCchhhcC
Confidence            677  99999999999 9999999999997543       489999998754321       112346788999998876


Q ss_pred             CCCCCCCCccchhHHHHHHHHHHH-hCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        212 THAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       212 ~~~~~~~~~~~Dv~slG~il~el~-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      ...   ++.++||||||+++||++ +|..||........... ....  .   ..+...++.+.++|.+||+.+|++|||
T Consensus       195 ~~~---~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~--~---~~~~~~~~~~~~li~~cl~~~p~~Rps  265 (274)
T cd05076         195 GNS---LSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-YEKK--H---RLPEPSCKELATLISQCLTYEPTQRPS  265 (274)
T ss_pred             CCC---CCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-HHhc--c---CCCCCCChHHHHHHHHHcccChhhCcC
Confidence            421   289999999999999995 68999976432211110 0000  0   112334568999999999999999999


Q ss_pred             hhHHHHHH
Q psy16840        291 FPTIRARL  298 (413)
Q Consensus       291 ~~~i~~~l  298 (413)
                      +.+++..|
T Consensus       266 ~~~il~~L  273 (274)
T cd05076         266 FRTILRDL  273 (274)
T ss_pred             HHHHHHhh
Confidence            99998876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.92  E-value=2e-25  Score=204.35  Aligned_cols=153  Identities=15%  Similarity=0.161  Sum_probs=113.9

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe-EEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW-VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      +..+..++.  |++  +||.|||+.|+ +||||||+||+++.++ .++|+|||++......       ....++..|+||
T Consensus       108 ~~~~~~~~~--qi~--~~l~~lH~~~i-~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-------~~~~~~~~y~aP  175 (267)
T PHA03390        108 EAEVKKIIR--QLV--EALNDLHKHNI-IHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP-------SCYDGTLDYFSP  175 (267)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCe-eeCCCCHHHEEEeCCCCeEEEecCccceecCCC-------ccCCCCCcccCh
Confidence            333344444  777  99999999998 9999999999999998 9999999998754321       223578899999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+..+    +.++||||||+++|+|++|..||.................... ......+++.+.++|.+||+.+|.
T Consensus       176 E~~~~~~~----~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~  250 (267)
T PHA03390        176 EKIKGHNY----DVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKK-LPFIKNVSKNANDFVQSMLKYNIN  250 (267)
T ss_pred             hhhcCCCC----CchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhccc-CCcccccCHHHHHHHHHHhccChh
Confidence            99987766    8899999999999999999999975432211100000001111 112246889999999999999999


Q ss_pred             CCCC-hhHHHHH
Q psy16840        287 SRPD-FPTIRAR  297 (413)
Q Consensus       287 ~Rps-~~~i~~~  297 (413)
                      +||+ ++++++.
T Consensus       251 ~R~~~~~~~l~h  262 (267)
T PHA03390        251 YRLTNYNEIIKH  262 (267)
T ss_pred             hCCchHHHHhcC
Confidence            9995 6888753

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.92  E-value=3.6e-25  Score=202.37  Aligned_cols=149  Identities=17%  Similarity=0.291  Sum_probs=113.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccC---CCcccccccCcccccCcccccCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN---DSIGEHQYYRSLLWKAPELLRDTHAP  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~  215 (413)
                      |++  .||+|||+.++ +|+||+|+||++++++.+||+|||++........   .........|+..|+|||.+.+..+ 
T Consensus       110 qi~--~~l~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-  185 (265)
T cd06631         110 QIL--DGVAYLHNNCV-VHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGY-  185 (265)
T ss_pred             HHH--HHHHHHHhCCc-ccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCC-
Confidence            777  99999999999 9999999999999999999999999876432111   1111223467899999999987766 


Q ss_pred             CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        216 IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                         +.++||||||+++|++++|..||...............  ....+..+..++.++.+++.+||..+|.+||++.+++
T Consensus       186 ---~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l  260 (265)
T cd06631         186 ---GRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAH--RGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLL  260 (265)
T ss_pred             ---cchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhc--cCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence               88999999999999999999999764322211111111  0111223456889999999999999999999999987


Q ss_pred             H
Q psy16840        296 A  296 (413)
Q Consensus       296 ~  296 (413)
                      .
T Consensus       261 ~  261 (265)
T cd06631         261 R  261 (265)
T ss_pred             c
Confidence            5

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.92  E-value=3e-25  Score=201.80  Aligned_cols=147  Identities=27%  Similarity=0.487  Sum_probs=111.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      +++  .||+|||+.++ +||||||+||+++.++.+||+|||++.........  ......++..|+|||.+.+..+    
T Consensus       108 ~l~--~~l~~lH~~~i-~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~----  178 (256)
T cd05112         108 DVC--EGMAYLESSNV-IHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT--SSTGTKFPVKWSSPEVFSFSKY----  178 (256)
T ss_pred             HHH--HHHHHHHHCCc-cccccccceEEEcCCCeEEECCCcceeecccCccc--ccCCCccchhhcCHhHhccCCc----
Confidence            666  99999999999 99999999999999999999999998754322111  1112234578999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++||+++ |..||............. ...++.   .+...+..+.+++.+||+.+|++|||+.++++.
T Consensus       179 ~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         179 SSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETIN-AGFRLY---KPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             ChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHh-CCCCCC---CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence            889999999999999998 999997543221111111 111111   123467899999999999999999999999887


Q ss_pred             H
Q psy16840        298 L  298 (413)
Q Consensus       298 l  298 (413)
                      |
T Consensus       255 l  255 (256)
T cd05112         255 L  255 (256)
T ss_pred             h
Confidence            6

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.92  E-value=2.1e-25  Score=203.17  Aligned_cols=148  Identities=19%  Similarity=0.253  Sum_probs=108.4

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeE--------EEEeccccccccccccCCCcccccccCccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWV--------LQVTDFGLHELRHCAENDSIGEHQYYRSLL  202 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~--------~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~  202 (413)
                      +..++.  ||+  .||+|||++++ +||||||+||+++.++.        +|++|||++.....       .....+++.
T Consensus       102 ~~~~~~--qi~--~~l~~lH~~~i-iH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~-------~~~~~~~~~  169 (258)
T cd05078         102 KLEVAK--QLA--WALHFLEDKGL-THGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP-------KEILLERIP  169 (258)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-ecCCCccceEEEecccccccCCCceEEecccccccccCC-------chhccccCC
Confidence            334444  777  99999999999 99999999999987654        69999998754321       123457888


Q ss_pred             ccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCC-CCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHh
Q psy16840        203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRR-GPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCW  281 (413)
Q Consensus       203 y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (413)
                      |+|||++.+...   ++.++||||||+++|++++|. .||.......... ...  .++   .++...+.++.+++.+||
T Consensus       170 y~aPE~~~~~~~---~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~--~~~---~~~~~~~~~~~~li~~~l  240 (258)
T cd05078         170 WVPPECIENPQN---LSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYE--DRH---QLPAPKWTELANLINQCM  240 (258)
T ss_pred             ccCchhccCCCC---CCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHH--ccc---cCCCCCcHHHHHHHHHHh
Confidence            999999976432   288999999999999999984 6665432211100 000  011   123445678999999999


Q ss_pred             ccCCCCCCChhHHHHHHH
Q psy16840        282 AEAPESRPDFPTIRARLK  299 (413)
Q Consensus       282 ~~~P~~Rps~~~i~~~l~  299 (413)
                      +.+|++|||++++++.|+
T Consensus       241 ~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         241 DYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             ccChhhCCCHHHHHHhcC
Confidence            999999999999988763

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.92  E-value=2.2e-25  Score=206.09  Aligned_cols=154  Identities=16%  Similarity=0.279  Sum_probs=115.5

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  |++  .||+|||++|+ +||||+|+||+++.++.++|+|||++.......   .......|++.|+|||.+
T Consensus       116 ~~~~~~~--ql~--~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~---~~~~~~~~~~~y~aPE~~  187 (285)
T cd06648         116 QIATVCL--AVL--KALSFLHAQGV-IHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV---PRRKSLVGTPYWMAPEVI  187 (285)
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCe-ecCCCChhhEEEcCCCcEEEcccccchhhccCC---cccccccCCccccCHHHh
Confidence            3344555  777  99999999999 999999999999999999999999876543211   112334678999999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .+..+    +.++||||||+++|+|++|..||.............. ...+... .+..++..+.+++.+||+.+|++||
T Consensus       188 ~~~~~----~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rp  261 (285)
T cd06648         188 SRLPY----GTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRD-NLPPKLK-NLHKVSPRLRSFLDRMLVRDPAQRA  261 (285)
T ss_pred             cCCCC----CCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHh-cCCCCCc-ccccCCHHHHHHHHHHcccChhhCc
Confidence            87766    8899999999999999999999975432211111111 1111111 1234778999999999999999999


Q ss_pred             ChhHHHHH
Q psy16840        290 DFPTIRAR  297 (413)
Q Consensus       290 s~~~i~~~  297 (413)
                      ++.++++.
T Consensus       262 t~~~il~~  269 (285)
T cd06648         262 TAAELLNH  269 (285)
T ss_pred             CHHHHccC
Confidence            99999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.92  E-value=6.8e-25  Score=202.76  Aligned_cols=159  Identities=19%  Similarity=0.272  Sum_probs=114.6

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..+..++.  ||+  .||.|||+.++ +||||||+||+++.++.+||+|||++........   ......++..|+|||
T Consensus        99 ~~~~~~~~~--ql~--~~l~~LH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~aPE  170 (286)
T cd07847          99 EHLIKKIIW--QTL--QAVNFCHKHNC-IHRDVKPENILITKQGQIKLCDFGFARILTGPGD---DYTDYVATRWYRAPE  170 (286)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCc-eecCCChhhEEEcCCCcEEECccccceecCCCcc---cccCcccccccCCHH
Confidence            333444444  777  99999999999 9999999999999999999999999876543221   122345678899999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC--------------------------CCCCCCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE--------------------------DCEEPFRPN  261 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~--------------------------~~~~~~~~~  261 (413)
                      .+.+...   ++.++||||||+++|+|++|..||.+....+....                          .........
T Consensus       171 ~~~~~~~---~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (286)
T cd07847         171 LLVGDTQ---YGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREP  247 (286)
T ss_pred             HHhCCCC---cCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccC
Confidence            9876432   28899999999999999999999976442111000                          000000000


Q ss_pred             cccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .....+..+..+.+++.+||+.+|++||++.+++..
T Consensus       248 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         248 LESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             HHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence            111123567889999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.92  E-value=7.7e-26  Score=217.97  Aligned_cols=149  Identities=21%  Similarity=0.217  Sum_probs=108.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccC-----------------------------
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN-----------------------------  189 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-----------------------------  189 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++........                             
T Consensus       109 qi~--~al~~lH~~~i-vHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (382)
T cd05625         109 ELT--CAVESVHKMGF-IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRC  185 (382)
T ss_pred             HHH--HHHHHHHhCCe-ecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccc
Confidence            777  99999999999 9999999999999999999999999753210000                             


Q ss_pred             ---------------CCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q psy16840        190 ---------------DSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC  254 (413)
Q Consensus       190 ---------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~  254 (413)
                                     ........+||+.|+|||++.+..+    +.++|||||||++|||++|..||.+.+.......+.
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~----~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~  261 (382)
T cd05625         186 GDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGY----TQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVI  261 (382)
T ss_pred             cccccchhhhhccccccccccccccCcccCCHHHhcCCCC----CCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence                           0000123468999999999988776    899999999999999999999998654322211111


Q ss_pred             CCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC---hhHHHH
Q psy16840        255 EEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD---FPTIRA  296 (413)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps---~~~i~~  296 (413)
                      ........+ ....+++++.+++.+|+ .+|.+|++   +.+++.
T Consensus       262 ~~~~~~~~p-~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~  304 (382)
T cd05625         262 NWQTSLHIP-PQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA  304 (382)
T ss_pred             ccCCCcCCC-CcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence            111111111 11357889999998876 59999997   666654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.92  E-value=4.6e-26  Score=219.07  Aligned_cols=150  Identities=19%  Similarity=0.166  Sum_probs=110.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccC-----------------------------
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN-----------------------------  189 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-----------------------------  189 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++........                             
T Consensus       109 qi~--~al~~lH~~~i-vHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (376)
T cd05598         109 ELT--CAIESVHKMGF-IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRL  185 (376)
T ss_pred             HHH--HHHHHHHHCCe-EeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccc
Confidence            777  99999999999 9999999999999999999999999753210000                             


Q ss_pred             -----------CCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCC
Q psy16840        190 -----------DSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF  258 (413)
Q Consensus       190 -----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  258 (413)
                                 .........||+.|+|||++.+..+    +.++|||||||++|||++|..||.+.........+.....
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~----~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~  261 (376)
T cd05598         186 KPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGY----TQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWET  261 (376)
T ss_pred             cchhhhhhhhcccccccccCCCccccCHHHHcCCCC----CcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCc
Confidence                       0000123478999999999988776    8999999999999999999999987553222111111111


Q ss_pred             CCCcccccCCChHHHHHHHHHHhccCCCCCC---ChhHHHHH
Q psy16840        259 RPNLELLRDSCEPFVLACMRDCWAEAPESRP---DFPTIRAR  297 (413)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp---s~~~i~~~  297 (413)
                      ....+ ....+++++.+++.+|+ .+|.+|+   ++.+++.+
T Consensus       262 ~~~~~-~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         262 TLHIP-SQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             cccCC-CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            11111 11357889999999976 5999999   78888655

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.92  E-value=3.5e-25  Score=201.29  Aligned_cols=157  Identities=29%  Similarity=0.482  Sum_probs=116.2

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..+..++.  |++  .||+|||+.++ +||||||+||++++++.++|+|||++..........  .....+++.|+||
T Consensus       101 ~~~~~~~~~~--ql~--~~l~~lh~~~~-~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~y~~P  173 (258)
T smart00219      101 SLSDLLSFAL--QIA--RGMEYLESKNF-IHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK--KKGGKLPIRWMAP  173 (258)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHhcCCe-eecccccceEEEccCCeEEEcccCCceecccccccc--cccCCCcccccCh
Confidence            3334444555  777  99999999999 999999999999999999999999987654331111  1122367889999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |.+.+...    +.++||||+|+++|+|++ |..||............... ..+.   .+..++.++.+++.+||..+|
T Consensus       174 e~~~~~~~----~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~i~~~l~~~p  245 (258)
T smart00219      174 ESLKDGKF----TSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKG-YRLP---KPENCPPEIYKLMLQCWAEDP  245 (258)
T ss_pred             HHhccCCC----CcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-CCCC---CCCcCCHHHHHHHHHHCcCCh
Confidence            99876655    899999999999999998 78888754322111111111 1111   224578899999999999999


Q ss_pred             CCCCChhHHHHHH
Q psy16840        286 ESRPDFPTIRARL  298 (413)
Q Consensus       286 ~~Rps~~~i~~~l  298 (413)
                      ++|||+.++++.|
T Consensus       246 ~~Rpt~~~ll~~l  258 (258)
T smart00219      246 EDRPTFSELVEIL  258 (258)
T ss_pred             hhCcCHHHHHhhC
Confidence            9999999998753

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.92  E-value=2.9e-25  Score=205.95  Aligned_cols=151  Identities=17%  Similarity=0.245  Sum_probs=111.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCC-CCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTH-APIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~  217 (413)
                      |++  .||+|||+.++ +||||||+||+++.++.+||+|||++........   ......|+..|+|||.+.... ....
T Consensus       136 qi~--~al~~lH~~~i-vH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~  209 (291)
T cd06639         136 GAL--LGLQHLHNNRI-IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL---RRNTSVGTPFWMAPEVIACEQQYDYS  209 (291)
T ss_pred             HHH--HHHHHHHhCCe-eccCCCHHHEEEcCCCCEEEeecccchhcccccc---cccCccCCccccChhhhcCCCCcccc
Confidence            666  99999999999 9999999999999999999999999876532211   122346788999999986543 1122


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ++.++|||||||++|+|++|+.||.............. ...+.. ..+...+..+.++|.+||+.+|++||++.++++.
T Consensus       210 ~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         210 YDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR-NPPPTL-LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             cCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhc-CCCCCC-CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            38899999999999999999999976432111111111 111111 1123466789999999999999999999999764

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG0574|consensus

Probab=99.92  E-value=2.7e-26  Score=199.42  Aligned_cols=148  Identities=18%  Similarity=0.310  Sum_probs=120.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      +-+  +||+|||...- ||||||..|||++.+|.+||+|||.|..+....   ...++..||+.|||||++..-.|    
T Consensus       137 ~TL--KGL~YLH~~~K-IHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM---AKRNTVIGTPFWMAPEVI~EIGY----  206 (502)
T KOG0574|consen  137 DTL--KGLQYLHDLKK-IHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM---AKRNTVIGTPFWMAPEVIEEIGY----  206 (502)
T ss_pred             HHH--hHHHHHHHHHH-HHhhcccccEEEcccchhhhhhccccchhhhhH---HhhCccccCcccccHHHHHHhcc----
Confidence            666  89999998887 899999999999999999999999987654332   22466789999999999998887    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ..++||||||++..||..|++||.+.........+...+  |+.-.-|...+.++.+++++||-++|++|.|+-+++++.
T Consensus       207 ~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~P--PPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~  284 (502)
T KOG0574|consen  207 DTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKP--PPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHT  284 (502)
T ss_pred             chhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCC--CCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence            899999999999999999999998865444333332222  221122356788999999999999999999999988764

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.92  E-value=8.6e-25  Score=204.48  Aligned_cols=160  Identities=17%  Similarity=0.321  Sum_probs=117.1

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  +++  .||.|||++++ +||||+|+||+++.++.+||+|||++.....       .....+++.|+|||.+
T Consensus       116 ~~~~~~~--~l~--~~l~~LH~~~i-~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~-------~~~~~~~~~y~aPE~~  183 (308)
T cd06634         116 EIAAVTH--GAL--QGLAYLHSHNM-IHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMAPEVI  183 (308)
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCc-ccCCCCHHhEEECCCCcEEECCcccceeecC-------cccccCCccccCHHHH
Confidence            3344444  777  99999999999 9999999999999999999999999865432       1234578899999997


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .+... ..++.++|||||||++|+|++|..||.............. ...+..  ....++..+.++|.+||..+|.+||
T Consensus       184 ~~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~li~~cl~~~P~~Rp  259 (308)
T cd06634         184 LAMDE-GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPAL--QSGHWSEYFRNFVDSCLQKIPQDRP  259 (308)
T ss_pred             hhccc-CCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhh-cCCCCc--CcccccHHHHHHHHHHhhCCcccCC
Confidence            53211 0127899999999999999999999865432111111111 111111  1245778899999999999999999


Q ss_pred             ChhHHHHHHHhhcccC
Q psy16840        290 DFPTIRARLKHMKDGK  305 (413)
Q Consensus       290 s~~~i~~~l~~~~~~~  305 (413)
                      ++.+++..........
T Consensus       260 ~~~~ll~~~~~~~~~~  275 (308)
T cd06634         260 TSEVLLKHRFVLRERP  275 (308)
T ss_pred             CHHHHhhCccccccCC
Confidence            9999998866555433

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.92  E-value=4.4e-25  Score=206.43  Aligned_cols=147  Identities=22%  Similarity=0.308  Sum_probs=110.3

Q ss_pred             CCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      |++  +||.|||+ .++ +||||||+|||++.++.+||+|||++......     ......|+..|+|||.+.+..+   
T Consensus       107 ~i~--~~l~~lH~~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~---  175 (308)
T cd06615         107 AVL--RGLTYLREKHKI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTHY---  175 (308)
T ss_pred             HHH--HHHHHHHhhCCE-EECCCChHHEEEecCCcEEEccCCCccccccc-----ccccCCCCcCccChhHhcCCCC---
Confidence            777  99999997 578 99999999999999999999999998654221     1234567899999999877665   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC-----------------------------------CCCCCCc
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCE-----------------------------------EPFRPNL  262 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~-----------------------------------~~~~~~~  262 (413)
                       +.++||||||+++|++++|..||..............                                   ....|..
T Consensus       176 -~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (308)
T cd06615         176 -TVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKL  254 (308)
T ss_pred             -CccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccC
Confidence             8899999999999999999999864331111000000                                   0000110


Q ss_pred             ccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHH
Q psy16840        263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK  299 (413)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~  299 (413)
                      +  ...+++++.+++.+||..+|++||++.+++....
T Consensus       255 ~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~  289 (308)
T cd06615         255 P--SGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF  289 (308)
T ss_pred             c--CcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence            0  0236778999999999999999999999987754

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=3.5e-25  Score=203.31  Aligned_cols=151  Identities=16%  Similarity=0.298  Sum_probs=111.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCC-CCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA-PIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~  217 (413)
                      |++  .||.|||+.++ +||||+|+||+++.++.+||+|||++.......   .......|+..|+|||.+..... ...
T Consensus       121 ql~--~al~~lH~~~i-~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~  194 (275)
T cd06608         121 ETL--RGLAYLHENKV-IHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL---GRRNTFIGTPYWMAPEVIACDEQPDAS  194 (275)
T ss_pred             HHH--HHHHHHhcCCc-ccCCCCHHHEEEccCCeEEECCCccceecccch---hhhcCccccccccCHhHhcccccccCC
Confidence            677  99999999999 999999999999999999999999987643221   11233467889999998864321 123


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ++.++||||||+++|++++|..||............... ..+... .+..+++.+.+++.+||..||++|||+.+++..
T Consensus       195 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~  272 (275)
T cd06608         195 YDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN-PPPTLK-SPENWSKKFNDFISECLIKNYEQRPFMEELLEH  272 (275)
T ss_pred             ccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc-CCCCCC-chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            478999999999999999999999754321111111111 111111 123467899999999999999999999998753

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.92  E-value=7.1e-25  Score=229.48  Aligned_cols=177  Identities=12%  Similarity=0.083  Sum_probs=114.9

Q ss_pred             hhhhhhhhhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC--
Q psy16840         93 EIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR--  170 (413)
Q Consensus        93 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~--  170 (413)
                      .++.+..+|.++|....    ..++.          ..+..+++  ||+  +||+|||++|| +||||||+||||+..  
T Consensus        58 ~~e~~~~~L~~~l~~~~----~~~~~----------~~~~~i~~--qi~--~al~~lH~~gI-vHrDlKP~NiLl~~~~~  118 (793)
T PLN00181         58 ALECEDVSLRQWLDNPD----RSVDA----------FECFHVFR--QIV--EIVNAAHSQGI-VVHNVRPSCFVMSSFNH  118 (793)
T ss_pred             hhccCCccHHHHHhccc----ccccH----------HHHHHHHH--HHH--HHHHHHHhCCe-eeccCCchhEEEcccCc
Confidence            35556667777775321    11222          22334444  777  99999999999 999999999999643  


Q ss_pred             -----------------eEEEEeccccccccccccCC-------------CcccccccCcccccCcccccCCCCCCCCCc
Q psy16840        171 -----------------WVLQVTDFGLHELRHCAEND-------------SIGEHQYYRSLLWKAPELLRDTHAPIRGTQ  220 (413)
Q Consensus       171 -----------------~~~kl~Dfg~a~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  220 (413)
                                       +.+|++|||+++........             ........||+.|+|||++.+..+    +.
T Consensus       119 ~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~----~~  194 (793)
T PLN00181        119 VSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSS----NC  194 (793)
T ss_pred             EEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCC----Cc
Confidence                             45566666666532110000             000112457899999999988776    89


Q ss_pred             cchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        221 KADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       221 ~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ++|||||||+||||++|..|+......  ..........+..    ....+....++.+||..+|.+||++.++++..
T Consensus       195 ~sDVwSlGviL~ELl~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~  266 (793)
T PLN00181        195 ASDVYRLGVLLFELFCPVSSREEKSRT--MSSLRHRVLPPQI----LLNWPKEASFCLWLLHPEPSCRPSMSELLQSE  266 (793)
T ss_pred             hhhhhhHHHHHHHHhhCCCchhhHHHH--HHHHHHhhcChhh----hhcCHHHHHHHHHhCCCChhhCcChHHHhhch
Confidence            999999999999999998887532100  0000000111110    11234567889999999999999999998754

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.91  E-value=5.6e-25  Score=200.80  Aligned_cols=153  Identities=16%  Similarity=0.242  Sum_probs=112.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcc-cccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG-EHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      +++  .||.|||+.++ +|+||+|+||++++++.+||+|||++............ .....++..|+|||.+.+... ..
T Consensus       107 ~i~--~~l~~lh~~~i-~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~  182 (264)
T cd06626         107 QLL--EGLAYLHSHGI-VHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKG-KG  182 (264)
T ss_pred             HHH--HHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCC-CC
Confidence            777  99999999999 99999999999999999999999998765433221111 123457889999999987651 12


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                      .+.++||||||+++|++++|..||..................+..+. ...+++.+.+++.+||+.+|.+||++.+++.
T Consensus       183 ~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         183 HGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPD-SLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             CCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCc-ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            38899999999999999999999975421111110111122222221 1245889999999999999999999999865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=9.5e-26  Score=216.94  Aligned_cols=150  Identities=16%  Similarity=0.145  Sum_probs=108.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC----------C-----------------
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND----------S-----------------  191 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----------~-----------------  191 (413)
                      |++  .||+|||+.|+ +||||||+|||++.++.+||+|||+++........          .                 
T Consensus       109 ql~--~aL~~LH~~gi-vHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (377)
T cd05629         109 ECV--LAIEAVHKLGF-IHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSIN  185 (377)
T ss_pred             HHH--HHHHHHHhCCe-eccCCCHHHEEECCCCCEEEeeccccccccccccccccccccccccccccccccccccccccc
Confidence            777  99999999999 99999999999999999999999998632110000          0                 


Q ss_pred             -----------------cccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q psy16840        192 -----------------IGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC  254 (413)
Q Consensus       192 -----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~  254 (413)
                                       .......||+.|+|||++.+..+    +.++|||||||++|||++|..||.+.........+.
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~----~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~  261 (377)
T cd05629         186 LTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGY----GQECDWWSLGAIMFECLIGWPPFCSENSHETYRKII  261 (377)
T ss_pred             ccccchhhhhhhhhcccccccccCCCccccCHHHHccCCC----CCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHH
Confidence                             00012468999999999988766    899999999999999999999997654322111111


Q ss_pred             CCCCCCCcccccCCChHHHHHHHHHHhccCCCCC---CChhHHHHH
Q psy16840        255 EEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR---PDFPTIRAR  297 (413)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R---ps~~~i~~~  297 (413)
                      ........+. ...+++++.+++.+|+. +|.+|   +++.+++.+
T Consensus       262 ~~~~~~~~p~-~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         262 NWRETLYFPD-DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             ccCCccCCCC-CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence            1111111110 12467899999999997 77765   588888765

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.91  E-value=2.9e-25  Score=209.72  Aligned_cols=163  Identities=23%  Similarity=0.349  Sum_probs=118.9

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ..++.  +|+  .||+|||++|+ +||||||.|||++.++.++|+|||++.................++..|+|||.+.+
T Consensus       106 ~~i~~--~l~--~~l~~LH~~gi-~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  180 (330)
T cd07834         106 QYFLY--QIL--RGLKYLHSANV-IHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLS  180 (330)
T ss_pred             HHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeec
Confidence            33444  777  99999999999 99999999999999999999999998876443211112334467889999999987


Q ss_pred             C-CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC--------------------------CCCCCCCCccc
Q psy16840        212 T-HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED--------------------------CEEPFRPNLEL  264 (413)
Q Consensus       212 ~-~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~--------------------------~~~~~~~~~~~  264 (413)
                      . ..    +.++|+||||+++|+|++|..||.+.+..+....+                          ...........
T Consensus       181 ~~~~----~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (330)
T cd07834         181 SSRY----TKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSK  256 (330)
T ss_pred             ccCC----CcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHH
Confidence            7 44    89999999999999999999999765421100000                          00000001111


Q ss_pred             ccCCChHHHHHHHHHHhccCCCCCCChhHHHHH--HHhhcc
Q psy16840        265 LRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR--LKHMKD  303 (413)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~--l~~~~~  303 (413)
                      .....++.+.+++.+||+.+|.+||++.+++..  ++.+..
T Consensus       257 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         257 LFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             hcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence            224478899999999999999999999999875  444443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.9e-25  Score=211.01  Aligned_cols=154  Identities=14%  Similarity=0.155  Sum_probs=108.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCC-CCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA-PIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~  217 (413)
                      ||+  .||+|||++++ +||||||+|||++.++.+||+|||++........  .......||+.|+|||++..... ...
T Consensus       110 qi~--~~l~~lH~~~i-vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~  184 (331)
T cd05597         110 EMV--LAIDSVHQLGY-VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT--VQSNVAVGTPDYISPEILQAMEDGKGR  184 (331)
T ss_pred             HHH--HHHHHHHhCCe-EECCCCHHHEEECCCCCEEEEECCceeecCCCCC--ccccceeccccccCHHHHhhccccccC
Confidence            777  99999999999 9999999999999999999999999865432211  11223468999999999874211 012


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC--CCCChhHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE--SRPDFPTIR  295 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~--~Rps~~~i~  295 (413)
                      ++.++|||||||++|+|++|+.||.+.+..+....+.........+.....+++.+.+++.+|+..+++  .||++.+++
T Consensus       185 ~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l  264 (331)
T cd05597         185 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFK  264 (331)
T ss_pred             CCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence            378999999999999999999999765432221111111111111112245788999999998865333  377888887


Q ss_pred             HH
Q psy16840        296 AR  297 (413)
Q Consensus       296 ~~  297 (413)
                      .+
T Consensus       265 ~h  266 (331)
T cd05597         265 DH  266 (331)
T ss_pred             cC
Confidence            65

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.3e-24  Score=200.12  Aligned_cols=154  Identities=18%  Similarity=0.372  Sum_probs=115.7

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  |++  .||.|||+.|+ +||||+|+||+++.++.++|+|||++........   ......|+..|+|||.+
T Consensus       102 ~~~~i~~--~i~--~~l~~lh~~~i-~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~  173 (277)
T cd06917         102 YISVIIR--EVL--VALKYIHKVGV-IHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS---KRSTFVGTPYWMAPEVI  173 (277)
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCc-ccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc---ccccccCCcceeCHHHh
Confidence            3334444  677  99999999999 9999999999999999999999999876543221   12334678899999988


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .+...   ++.++|+||||+++|+|++|..||.+........... ....+...  ....+.++.+++.+||..||++||
T Consensus       174 ~~~~~---~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~R~  247 (277)
T cd06917         174 TEGKY---YDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP-KSKPPRLE--DNGYSKLLREFVAACLDEEPKERL  247 (277)
T ss_pred             ccCCc---cccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc-cCCCCCCC--cccCCHHHHHHHHHHcCCCcccCc
Confidence            65432   2889999999999999999999997654322221111 11112211  123788999999999999999999


Q ss_pred             ChhHHHHH
Q psy16840        290 DFPTIRAR  297 (413)
Q Consensus       290 s~~~i~~~  297 (413)
                      ++.+++..
T Consensus       248 ~~~~il~~  255 (277)
T cd06917         248 SAEELLKS  255 (277)
T ss_pred             CHHHHhhC
Confidence            99999864

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.91  E-value=2.9e-25  Score=227.73  Aligned_cols=155  Identities=17%  Similarity=0.266  Sum_probs=112.3

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcC-------CCcccCCCCCCCeEEcC-----------------CeEEEEecccccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRS-------PIGCHGNLKSSNCVVTS-----------------RWVLQVTDFGLHE  182 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~-------~iiiHrdlkp~Nill~~-----------------~~~~kl~Dfg~a~  182 (413)
                      ....+..++.  ||+  .||.|||+.       +| |||||||+||||+.                 .+.+||+|||++.
T Consensus       116 ~E~~Il~Ia~--QIL--~ALaYLHs~g~~~~~k~I-VHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr  190 (1021)
T PTZ00266        116 EEHAIVDITR--QLL--HALAYCHNLKDGPNGERV-LHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSK  190 (1021)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhcccccccCCc-eeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccc
Confidence            3334444555  777  999999984       47 99999999999964                 2458999999987


Q ss_pred             ccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy16840        183 LRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL  262 (413)
Q Consensus       183 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  262 (413)
                      ......    ......||+.|+|||++.+...  .++.++|||||||++|+|++|..||................  +..
T Consensus       191 ~l~~~s----~~~s~vGTp~YmAPEvL~ge~~--~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~--p~l  262 (1021)
T PTZ00266        191 NIGIES----MAHSCVGTPYYWSPELLLHETK--SYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRG--PDL  262 (1021)
T ss_pred             cccccc----cccccCCCccccCHHHHhccCC--CCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcC--CCC
Confidence            653221    1234578999999999865432  23889999999999999999999997543221111111111  111


Q ss_pred             ccccCCChHHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                      +  ....++++.+||..||..+|.+||++.+++.
T Consensus       263 p--i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        263 P--IKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             C--cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            1  1356789999999999999999999999984

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.91  E-value=8.4e-25  Score=203.05  Aligned_cols=150  Identities=20%  Similarity=0.268  Sum_probs=109.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++++ +||||||+||+++.++.+||+|||++........   ......+++.|+|||.+.+...   .
T Consensus       114 qi~--~aL~~LH~~~i-~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~---~  184 (293)
T cd07843         114 QLL--SGVAHLHDNWI-LHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK---PYTQLVVTLWYRAPELLLGAKE---Y  184 (293)
T ss_pred             HHH--HHHHHHHHCCe-eeccCCHHHEEECCCCcEEEeecCceeeccCCcc---ccccccccccccCchhhcCCcc---c
Confidence            666  99999999999 9999999999999999999999999876543211   1223456888999999876542   2


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC--------------------------CCCCCCCCCcccccCC-ChH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE--------------------------DCEEPFRPNLELLRDS-CEP  271 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~-~~~  271 (413)
                      +.++|+||||+++|+|++|..||...........                          ............++.. +++
T Consensus       185 ~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (293)
T cd07843         185 STAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSD  264 (293)
T ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCCh
Confidence            7899999999999999999999975432110000                          0000000001112222 578


Q ss_pred             HHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        272 FVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       272 ~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .+.++|.+||+.+|++|||+.+++..
T Consensus       265 ~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         265 NGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             HHHHHHHHHhccCccccCCHHHHhcC
Confidence            89999999999999999999998753

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0612|consensus

Probab=99.91  E-value=1e-25  Score=225.62  Aligned_cols=238  Identities=14%  Similarity=0.117  Sum_probs=163.9

Q ss_pred             eEeecCcceeEEEEEeccccccccccccccccC--ccccCCCCCchhhhhhhhhhhHhhhhhhhccCCc-----------
Q psy16840         49 VVCMKGKGEVLTYWLVGATEGAVQGRERNQVSG--LPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQ-----------  115 (413)
Q Consensus        49 ~v~~kg~g~~~~~~l~~~~~~~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-----------  115 (413)
                      .+++.|+|.+..+.++.-.....+.+.+....-  ++....-+|..|-.+|..--..|+-+..+.....           
T Consensus        79 ilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~p  158 (1317)
T KOG0612|consen   79 ILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMP  158 (1317)
T ss_pred             HHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEeccc
Confidence            455778888887777766554432222222221  2223335566677777776666766544432222           


Q ss_pred             ----cchhhccc-ccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC
Q psy16840        116 ----ETLKLRIG-IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND  190 (413)
Q Consensus       116 ----~~~~~~~~-i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  190 (413)
                          +++-..++ +.=+|+ +++   .++|+  -||.-||+.|+ |||||||+|||+|..|++||+|||.+-.+..+  .
T Consensus       159 GGDlltLlSk~~~~pE~~A-rFY---~aEiV--lAldslH~mgy-VHRDiKPDNvLld~~GHikLADFGsClkm~~d--G  229 (1317)
T KOG0612|consen  159 GGDLLTLLSKFDRLPEDWA-RFY---TAEIV--LALDSLHSMGY-VHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD--G  229 (1317)
T ss_pred             CchHHHHHhhcCCChHHHH-HHH---HHHHH--HHHHHHHhccc-eeccCCcceeEecccCcEeeccchhHHhcCCC--C
Confidence                22222333 333444 121   23677  89999999999 99999999999999999999999987665432  2


Q ss_pred             CcccccccCcccccCcccccCCCCC-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCC
Q psy16840        191 SIGEHQYYRSLLWKAPELLRDTHAP-IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSC  269 (413)
Q Consensus       191 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (413)
                      .......+|||-|.+||+++..... ..|+..+|.||+||++|||++|..||...+..+....+.........|. ...+
T Consensus       230 ~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~-~~~V  308 (1317)
T KOG0612|consen  230 TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPD-ETDV  308 (1317)
T ss_pred             cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCc-cccc
Confidence            3334567899999999999765443 4569999999999999999999999998887777766665533333331 1458


Q ss_pred             hHHHHHHHHHHhccCCCCCCC---hhHHHHH
Q psy16840        270 EPFVLACMRDCWAEAPESRPD---FPTIRAR  297 (413)
Q Consensus       270 ~~~l~~li~~cl~~~P~~Rps---~~~i~~~  297 (413)
                      |+++++||.+.+. +|+.|..   ++++..+
T Consensus       309 SeeakdLI~~ll~-~~e~RLgrngiedik~H  338 (1317)
T KOG0612|consen  309 SEEAKDLIEALLC-DREVRLGRNGIEDIKNH  338 (1317)
T ss_pred             CHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence            9999999998875 7888877   8887654

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.91  E-value=5.1e-25  Score=200.15  Aligned_cols=144  Identities=20%  Similarity=0.316  Sum_probs=111.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-eEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      +++  .||+|||++|+ +||||+|+||+++.+ +.+||+|||++.......    ......++..|+|||.+.+...   
T Consensus       109 ~i~--~~l~~lh~~~i-~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~---  178 (256)
T cd08220         109 QIL--LALHHVHTKLI-LHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS----KAYTVVGTPCYISPELCEGKPY---  178 (256)
T ss_pred             HHH--HHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc----cccccccCCcccCchhccCCCC---
Confidence            677  99999999999 999999999999854 578999999987653221    1223467889999999987665   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                       +.++||||||+++|+|++|..||.................    ...+..+++.+.+++.+||..+|.+|||+.+++..
T Consensus       179 -~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         179 -NQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTF----APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             -CcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCC----CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence             8899999999999999999999976442221111111111    11235678899999999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.91  E-value=9.3e-25  Score=208.20  Aligned_cols=159  Identities=23%  Similarity=0.297  Sum_probs=115.9

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      +...+..++.  |++  .||+|||++|+ +||||||+||+++.++.+||+|||+++......    ......++..|+||
T Consensus       116 ~~~~~~~~~~--ql~--~aL~~LH~~gi-~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~----~~~~~~~~~~y~aP  186 (353)
T cd07850         116 DHERMSYLLY--QML--CGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----MMTPYVVTRYYRAP  186 (353)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCe-eeCCCCHHHEEECCCCCEEEccCccceeCCCCC----CCCCCcccccccCH
Confidence            3333444555  888  99999999999 999999999999999999999999987653221    12234578899999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC--------------------------CC------
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE--------------------------DC------  254 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~--------------------------~~------  254 (413)
                      |.+.+..+    +.++|||||||++|+|++|+.||...+.......                          ..      
T Consensus       187 E~~~~~~~----~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
T cd07850         187 EVILGMGY----KENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYS  262 (353)
T ss_pred             HHHhCCCC----CCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcc
Confidence            99988776    8999999999999999999999975431100000                          00      


Q ss_pred             -----CC-CCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        255 -----EE-PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       255 -----~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                           .. .............++.+.+++.+||..||.+|||+.+++..-
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~  312 (353)
T cd07850         263 FEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHP  312 (353)
T ss_pred             hhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcCh
Confidence                 00 000000000123567899999999999999999999998653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.91  E-value=5.2e-25  Score=203.34  Aligned_cols=157  Identities=19%  Similarity=0.269  Sum_probs=113.0

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  |++  .||+|||++++ +||||+|+||+++.++.++|+|||++.........   .....++..|+|||++
T Consensus       100 ~~~~~~~--~i~--~~L~~lH~~~~-~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~~~aPE~~  171 (283)
T cd07835         100 LIKSYLY--QLL--QGIAYCHSHRV-LHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEIL  171 (283)
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCe-eCCCCCHHHEEEcCCCcEEEeecccccccCCCccc---cCccccccCCCCCcee
Confidence            3344444  777  99999999999 99999999999999999999999998754322111   1223457889999988


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC------------------------CCCCCCCCCCcccc
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG------------------------EDCEEPFRPNLELL  265 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~------------------------~~~~~~~~~~~~~~  265 (413)
                      .+...   ++.++||||||+++|+|++|..||...+......                        ........+.....
T Consensus       172 ~~~~~---~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (283)
T cd07835         172 LGSRQ---YSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKV  248 (283)
T ss_pred             ecCcc---cCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhh
Confidence            65432   2789999999999999999999997543211000                        00000111111222


Q ss_pred             cCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        266 RDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       266 ~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ...+++.+.+++.+||+.+|.+|||+.+++..
T Consensus       249 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         249 VPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             cCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            35677899999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.91  E-value=4.9e-25  Score=205.85  Aligned_cols=153  Identities=20%  Similarity=0.220  Sum_probs=112.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC------------CcccccccCcccccCc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND------------SIGEHQYYRSLLWKAP  206 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~------------~~~~~~~~gt~~y~aP  206 (413)
                      |++  .||.|||++++ +||||||+||+++.++.+||+|||+++........            ........++..|+||
T Consensus       109 ~i~--~~l~~lH~~~i-~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  185 (305)
T cd05609         109 ETV--LALEYLHNYGI-VHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAP  185 (305)
T ss_pred             HHH--HHHHHHHHCCc-cccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCc
Confidence            777  99999999999 99999999999999999999999998642111000            0011123567889999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |.+.+..+    +.++|+||||+++|++++|..||.+................  .+.....+++++.+++.+||+.+|+
T Consensus       186 E~~~~~~~----~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~  259 (305)
T cd05609         186 EVILRQGY----GKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE--WPEGDEALPADAQDLISRLLRQNPL  259 (305)
T ss_pred             hhccCCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC--CCCccccCCHHHHHHHHHHhccChh
Confidence            99887666    89999999999999999999999764422211111111111  1111235788999999999999999


Q ss_pred             CCCChhHHHHHHHh
Q psy16840        287 SRPDFPTIRARLKH  300 (413)
Q Consensus       287 ~Rps~~~i~~~l~~  300 (413)
                      +||++..+.+.|+.
T Consensus       260 ~R~~~~~~~~ll~~  273 (305)
T cd05609         260 ERLGTGGAFEVKQH  273 (305)
T ss_pred             hccCccCHHHHHhC
Confidence            99997666666554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.91  E-value=4.6e-25  Score=201.30  Aligned_cols=145  Identities=15%  Similarity=0.247  Sum_probs=113.6

Q ss_pred             CCchHHhhHhhh-----cCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCC
Q psy16840        139 DGIPRQGMTFLH-----RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTH  213 (413)
Q Consensus       139 ~i~~a~gL~yLH-----~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  213 (413)
                      +|+  .||+|||     +.++ +|+||+|+||+++.++.+||+|||++........   ......+++.|+|||.+.+..
T Consensus       113 ~i~--~~l~~lH~~~~~~~~i-~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~  186 (265)
T cd08217         113 QLL--LALYECHNRSDPGNTV-LHRDLKPANIFLDANNNVKLGDFGLAKILGHDSS---FAKTYVGTPYYMSPEQLNHMS  186 (265)
T ss_pred             HHH--HHHHHHhcCccccCcc-eecCCCHHHEEEecCCCEEEecccccccccCCcc---cccccccCCCccChhhhcCCC
Confidence            666  9999999     8899 9999999999999999999999999876543221   122346789999999998776


Q ss_pred             CCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhH
Q psy16840        214 APIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPT  293 (413)
Q Consensus       214 ~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~  293 (413)
                      .    +.++|+||||+++|+|++|..||............. ..   ..+.++...+..+.+++.+||+.+|.+||++.+
T Consensus       187 ~----~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~  258 (265)
T cd08217         187 Y----DEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIK-EG---KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEE  258 (265)
T ss_pred             C----CchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHh-cC---CCCCCccccCHHHHHHHHHHccCCcccCCCHHH
Confidence            5    889999999999999999999997644211111111 11   112234567889999999999999999999999


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      |++.
T Consensus       259 il~~  262 (265)
T cd08217         259 LLQL  262 (265)
T ss_pred             HhhC
Confidence            9864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.91  E-value=3.5e-26  Score=208.23  Aligned_cols=157  Identities=17%  Similarity=0.259  Sum_probs=113.4

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  |++  +||.|||++++ +|+||||+||+++.++.++|+|||.+....   ..........++..|+|||
T Consensus        97 ~~~~~~~~~--qi~--~~L~~Lh~~~i-~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~---~~~~~~~~~~~~~~y~aPE  168 (260)
T PF00069_consen   97 EEEILKIAY--QIL--EALAYLHSKGI-VHRDIKPENILLDENGEVKLIDFGSSVKLS---ENNENFNPFVGTPEYMAPE  168 (260)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-EESSBSGGGEEESTTSEEEESSGTTTEEST---STTSEBSSSSSSGGGSCHH
T ss_pred             ccccccccc--ccc--ccccccccccc-cccccccccccccccccccccccccccccc---ccccccccccccccccccc
Confidence            333444455  777  99999999999 999999999999999999999999986531   1112234456789999999


Q ss_pred             ccc-CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCccc---ccCCChHHHHHHHHHHhcc
Q psy16840        208 LLR-DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLEL---LRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       208 ~~~-~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~  283 (413)
                      ++. +...    +.++||||+|+++|+|++|..||............. .........   .....++.+.+++.+||+.
T Consensus       169 ~~~~~~~~----~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  243 (260)
T PF00069_consen  169 VLQQGKKY----TRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIE-KILKRPLPSSSQQSREKSEELRDLIKKMLSK  243 (260)
T ss_dssp             HHTTTSSB----STHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHH-HHHHTHHHHHTTSHTTSHHHHHHHHHHHSSS
T ss_pred             cccccccc----cccccccccccccccccccccccccccchhhhhhhh-hcccccccccccccchhHHHHHHHHHHHccC
Confidence            998 5555    999999999999999999999997641000000000 000000000   0012348999999999999


Q ss_pred             CCCCCCChhHHHHH
Q psy16840        284 APESRPDFPTIRAR  297 (413)
Q Consensus       284 ~P~~Rps~~~i~~~  297 (413)
                      ||++|||+.++++.
T Consensus       244 ~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  244 DPEQRPSAEELLKH  257 (260)
T ss_dssp             SGGGSTTHHHHHTS
T ss_pred             ChhHCcCHHHHhcC
Confidence            99999999998754

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.91  E-value=1.3e-25  Score=212.05  Aligned_cols=154  Identities=12%  Similarity=0.141  Sum_probs=109.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCC-CC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAP-IR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~  217 (413)
                      |++  .||+|||++++ +||||||+|||++.++.+||+|||++........  .......||+.|+|||++.+.... ..
T Consensus       110 qi~--~~L~~lH~~~i-iHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~  184 (331)
T cd05624         110 EMV--LAIHSIHQLHY-VHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT--VQSSVAVGTPDYISPEILQAMEDGMGK  184 (331)
T ss_pred             HHH--HHHHHHHHCCe-eeccCchHHEEEcCCCCEEEEeccceeeccCCCc--eeeccccCCcccCCHHHHhccccCCCC
Confidence            777  99999999999 9999999999999999999999999876532211  112234689999999998763110 12


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC--CCChhHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES--RPDFPTIR  295 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rps~~~i~  295 (413)
                      ++.++|||||||++|+|++|+.||...+.......+.....+...+.....+++++.+++.+|+..++.+  |+++++++
T Consensus       185 ~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~  264 (331)
T cd05624         185 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFK  264 (331)
T ss_pred             CCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHh
Confidence            3789999999999999999999997654322222222222222222222457889999999999865543  35666665


Q ss_pred             HH
Q psy16840        296 AR  297 (413)
Q Consensus       296 ~~  297 (413)
                      ++
T Consensus       265 ~h  266 (331)
T cd05624         265 KH  266 (331)
T ss_pred             cC
Confidence            43

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.91  E-value=4.4e-25  Score=203.45  Aligned_cols=145  Identities=17%  Similarity=0.215  Sum_probs=109.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC-CCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD-THAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~  217 (413)
                      |++  .||.|||++++ +||||||+|||+++++.+||+|||++......     ......|++.|+|||.+.+ ..+   
T Consensus       105 qi~--~al~~lH~~~i-vH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~---  173 (279)
T cd05633         105 EII--LGLEHMHNRFV-VYRDLKPANILLDEHGHVRISDLGLACDFSKK-----KPHASVGTHGYMAPEVLQKGTAY---  173 (279)
T ss_pred             HHH--HHHHHHHHCCc-CCCCCCHHHEEECCCCCEEEccCCcceecccc-----CccCcCCCcCccCHHHhcCCCCC---
Confidence            666  99999999999 99999999999999999999999998654221     1223468999999998864 334   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----Chh
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DFP  292 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~  292 (413)
                       +.++|||||||++|+|++|..||.......... ...... .....++..+++++.+++.+||..||.+||     +++
T Consensus       174 -~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~  250 (279)
T cd05633         174 -DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTL-TVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQ  250 (279)
T ss_pred             -CchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH-HHHHhh-cCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHH
Confidence             889999999999999999999997543211111 000000 011123456889999999999999999999     588


Q ss_pred             HHHHH
Q psy16840        293 TIRAR  297 (413)
Q Consensus       293 ~i~~~  297 (413)
                      +++++
T Consensus       251 ~~~~h  255 (279)
T cd05633         251 EVKEH  255 (279)
T ss_pred             HHHhC
Confidence            77664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=5.3e-25  Score=206.64  Aligned_cols=149  Identities=15%  Similarity=0.235  Sum_probs=111.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC--------------------------c
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS--------------------------I  192 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~--------------------------~  192 (413)
                      |++  .||+|||+.|+ +||||||+||+++.++.++|+|||++..........                          .
T Consensus       111 qi~--~~l~~lH~~~i-~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (316)
T cd05574         111 EVL--LALEYLHLLGI-VYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSF  187 (316)
T ss_pred             HHH--HHHHHHHHCCe-eccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccC
Confidence            777  99999999999 999999999999999999999999987543221100                          0


Q ss_pred             ccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHH
Q psy16840        193 GEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPF  272 (413)
Q Consensus       193 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (413)
                      ......|+..|+|||++.+...    +.++||||||+++|+|++|..||.+.+..............  .+. ....++.
T Consensus       188 ~~~~~~g~~~y~aPE~~~~~~~----~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~  260 (316)
T cd05574         188 RSNSFVGTEEYIAPEVISGDGH----GSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVT--FPG-SPPVSSS  260 (316)
T ss_pred             CCCCCcCccCCcCHHHHcCCCC----CchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCcc--CCC-ccccCHH
Confidence            1123467889999999987766    88999999999999999999999765432221111111111  111 1236889


Q ss_pred             HHHHHHHHhccCCCCCCC----hhHHHHH
Q psy16840        273 VLACMRDCWAEAPESRPD----FPTIRAR  297 (413)
Q Consensus       273 l~~li~~cl~~~P~~Rps----~~~i~~~  297 (413)
                      +.+++.+||..+|++||+    +.+++..
T Consensus       261 ~~~li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         261 ARDLIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             HHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence            999999999999999999    7777653

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.91  E-value=8.3e-25  Score=200.36  Aligned_cols=149  Identities=17%  Similarity=0.291  Sum_probs=110.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcC-CeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      ||+  .||+|||++++ +||||||+||+++. ++.+||+|||++........   ......|+..|+|||.+.+...  .
T Consensus       116 qi~--~al~~lH~~~i-~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~--~  187 (268)
T cd06624         116 QIL--EGLKYLHDNQI-VHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP---CTETFTGTLQYMAPEVIDKGPR--G  187 (268)
T ss_pred             HHH--HHHHHHHHCCE-eecCCCHHHEEEcCCCCeEEEecchhheecccCCC---ccccCCCCccccChhhhccccc--c
Confidence            777  99999999999 99999999999986 67999999999876532211   1223357889999999866432  1


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ++.++||||||+++|++++|..||..........  .........+.++..+++++.+++.+||+.+|.+|||+.+++..
T Consensus       188 ~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         188 YGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM--FKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCCccccChhhhH--hhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence            2789999999999999999999996533111111  00001111122345678899999999999999999999998764

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG1024|consensus

Probab=99.91  E-value=4.5e-25  Score=198.13  Aligned_cols=152  Identities=24%  Similarity=0.479  Sum_probs=122.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |+.  .|++|||++++ ||.||..+|++||+..++||+|=.+++-+..........+. .....||+||.+.+..+    
T Consensus       404 Qla--~am~hlh~~~V-iHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnE-nRPvkWMslEal~n~~y----  475 (563)
T KOG1024|consen  404 QLA--MAMEHLHNHGV-IHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNE-NRPVKWMSLEALQNSHY----  475 (563)
T ss_pred             HHH--HHHHHHHhcCc-ccchhhhhcceehhheeEEeccchhccccCcccccccCCCC-CCcccccCHHHHhhhhh----
Confidence            444  99999999999 99999999999999999999999999876655444333222 34678999999999988    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|||+| |+.||....+.+... ....+.|-..   |-+||+++..+|.-||+..|++||+++|+..-
T Consensus       476 ssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~-ylkdGyRlaQ---P~NCPDeLf~vMacCWallpeeRPsf~Qlv~c  551 (563)
T KOG1024|consen  476 SSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEH-YLKDGYRLAQ---PFNCPDELFTVMACCWALLPEERPSFSQLVIC  551 (563)
T ss_pred             cchhhhHHHHHHHHHHHhcCCCCccccCHHHHHH-HHhccceecC---CCCCcHHHHHHHHHHHhcCcccCCCHHHHHHH
Confidence            999999999999999998 899997655333221 2233333332   25899999999999999999999999999998


Q ss_pred             HHhhc
Q psy16840        298 LKHMK  302 (413)
Q Consensus       298 l~~~~  302 (413)
                      |.++.
T Consensus       552 LseF~  556 (563)
T KOG1024|consen  552 LSEFH  556 (563)
T ss_pred             HHHHH
Confidence            87764

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.91  E-value=4.6e-25  Score=204.05  Aligned_cols=148  Identities=18%  Similarity=0.345  Sum_probs=112.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||+.|+ +|+||+|+||+++.++.++|+|||++........   ......++..|+|||.+.+..+    
T Consensus       124 ~i~--~~L~~lH~~gi-~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~----  193 (286)
T cd06614         124 EVL--QGLEYLHSQNV-IHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS---KRNSVVGTPYWMAPEVIKRKDY----  193 (286)
T ss_pred             HHH--HHHHHHHhCCe-eeCCCChhhEEEcCCCCEEECccchhhhhccchh---hhccccCCcccCCHhHhcCCCC----
Confidence            666  99999999999 9999999999999999999999999765432211   1223356788999999887765    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      +.++|+||||+++|+|++|..||................. +... ....++..+.+++.+||+.+|..||++.+++...
T Consensus       194 ~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~  271 (286)
T cd06614         194 GPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI-PPLK-NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHP  271 (286)
T ss_pred             CCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CCCc-chhhCCHHHHHHHHHHhccChhhCcCHHHHhhCh
Confidence            8999999999999999999999975432211111111111 1111 1234788999999999999999999999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=5.9e-25  Score=200.91  Aligned_cols=148  Identities=19%  Similarity=0.313  Sum_probs=113.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++++ +|+||||+||+++.++.++|+|||+++................++..|+|||.+.+...    
T Consensus       114 ~i~--~al~~LH~~~i-~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~----  186 (264)
T cd06653         114 QIL--QGVSYLHSNMI-VHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGY----  186 (264)
T ss_pred             HHH--HHHHHHHhCCE-ecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCC----
Confidence            777  99999999999 99999999999999999999999998765322111111233467889999999987766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+|||||++|++++|+.||..............   .+..+.++...++.+.+++.+||. +|..||++.+++.+
T Consensus       187 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         187 GRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT---QPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             CccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc---CCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence            8899999999999999999999976432221111111   122233456788999999999999 57999999988653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.91  E-value=9.2e-25  Score=201.78  Aligned_cols=159  Identities=18%  Similarity=0.245  Sum_probs=113.5

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  |++  .||+|||++++ +||||+|+||+++.++.+||+|||++........   ......+++.|+|||
T Consensus        99 ~~~~~~~~~--~i~--~~l~~lh~~~i-~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE  170 (284)
T cd07860          99 LPLIKSYLF--QLL--QGLAFCHSHRV-LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR---TYTHEVVTLWYRAPE  170 (284)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCe-ecCCCCHHHEEECCCCCEEEeeccchhhcccCcc---ccccccccccccCCe
Confidence            333444444  777  99999999999 9999999999999999999999999875432211   112234678899999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC------------------------CCCCCCCCcc
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED------------------------CEEPFRPNLE  263 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~------------------------~~~~~~~~~~  263 (413)
                      .+.+...   ++.++||||||+++|+|+||..||.+.+........                        ..........
T Consensus       171 ~~~~~~~---~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (284)
T cd07860         171 ILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFS  247 (284)
T ss_pred             EEecCCC---CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHH
Confidence            8876542   278899999999999999999999764321100000                        0000011111


Q ss_pred             cccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       264 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .....+++++.++|.+||+.||.+|||+.+++..
T Consensus       248 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         248 KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence            1223567889999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.91  E-value=1e-24  Score=202.88  Aligned_cols=158  Identities=16%  Similarity=0.254  Sum_probs=113.5

Q ss_pred             HhhhccccCCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      +..++.  ||+  .||+|||+ .++ +||||+|+||++++++.+||+|||++........    .....++..|+|||.+
T Consensus       116 ~~~i~~--~i~--~~l~~lH~~~~i-~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~  186 (296)
T cd06618         116 LGKMTV--AIV--KALHYLKEKHGV-IHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA----KTRSAGCAAYMAPERI  186 (296)
T ss_pred             HHHHHH--HHH--HHHHHHHhhCCE-ecCCCcHHHEEEcCCCCEEECccccchhccCCCc----ccCCCCCccccCHhhc
Confidence            334444  777  99999997 588 9999999999999999999999999876532211    1223467889999998


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCC-CCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLY-EPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      .+......++.++||||||+++|+|++|+.||...... +....... ...+..+ ....+++++.+++.+||..||.+|
T Consensus       187 ~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~R  264 (296)
T cd06618         187 DPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQ-EEPPSLP-PNEGFSPDFCSFVDLCLTKDHRKR  264 (296)
T ss_pred             CCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhc-CCCCCCC-CCCCCCHHHHHHHHHHccCChhhC
Confidence            76542122388999999999999999999999652211 00000000 1111111 112468899999999999999999


Q ss_pred             CChhHHHHHHH
Q psy16840        289 PDFPTIRARLK  299 (413)
Q Consensus       289 ps~~~i~~~l~  299 (413)
                      |++.+++....
T Consensus       265 p~~~~il~~~~  275 (296)
T cd06618         265 PKYRELLQHPF  275 (296)
T ss_pred             CCHHHHhcChh
Confidence            99999987643

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.91  E-value=1.1e-24  Score=205.55  Aligned_cols=155  Identities=16%  Similarity=0.247  Sum_probs=107.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC----cccccccCcccccCcccccCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS----IGEHQYYRSLLWKAPELLRDTHA  214 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~  214 (413)
                      |++  .||+|||++++ +||||||+|||++.++.++++|||.+..........    .......++..|+|||++.+...
T Consensus       109 qi~--~~L~~LH~~~i-iH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  185 (327)
T cd08227         109 GVL--KALDYIHHMGY-VHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQ  185 (327)
T ss_pred             HHH--HHHHHHHHCCE-ecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccC
Confidence            777  99999999999 999999999999999999999998654322111000    00122346778999999976421


Q ss_pred             CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC-------------------------------CC-----C
Q psy16840        215 PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCE-------------------------------EP-----F  258 (413)
Q Consensus       215 ~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~-------------------------------~~-----~  258 (413)
                        .++.++|||||||++|||++|..||..............                               ..     .
T Consensus       186 --~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (327)
T cd08227         186 --GYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTP  263 (327)
T ss_pred             --CCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCc
Confidence              128899999999999999999999975321110000000                               00     0


Q ss_pred             CC-----CcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        259 RP-----NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       259 ~~-----~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ++     ........+++.+.+++.+||+.||++|||+.++++..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p  308 (327)
T cd08227         264 RPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS  308 (327)
T ss_pred             CccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcCh
Confidence            00     00011234577899999999999999999999998753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.91  E-value=1.1e-24  Score=202.23  Aligned_cols=152  Identities=16%  Similarity=0.273  Sum_probs=115.7

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ..++.  |++  .||.|||++|+ +||||||+||+++.++.+||+|||++........   ......+++.|+|||.+.+
T Consensus       118 ~~i~~--~l~--~al~~LH~~gi-~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~  189 (293)
T cd06647         118 AAVCR--ECL--QALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRSTMVGTPYWMAPEVVTR  189 (293)
T ss_pred             HHHHH--HHH--HHHHHHHhCCE-eeccCCHHHEEEcCCCCEEEccCcceeccccccc---ccccccCChhhcCchhhcc
Confidence            34444  777  99999999999 9999999999999999999999998765432211   1223467889999999877


Q ss_pred             CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        212 THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       212 ~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      ..+    +.++|+||||+++|++++|..||...+.......... ...+... .+...+..+.+++.+||..+|.+||++
T Consensus       190 ~~~----~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~  263 (293)
T cd06647         190 KAY----GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPELQ-NPEKLSAIFRDFLNRCLEMDVEKRGSA  263 (293)
T ss_pred             CCC----CchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-CCCCCCC-CccccCHHHHHHHHHHccCChhhCcCH
Confidence            665    8899999999999999999999976543222111111 1111111 124567889999999999999999999


Q ss_pred             hHHHHH
Q psy16840        292 PTIRAR  297 (413)
Q Consensus       292 ~~i~~~  297 (413)
                      .+++.+
T Consensus       264 ~~il~h  269 (293)
T cd06647         264 KELLQH  269 (293)
T ss_pred             HHHhcC
Confidence            999865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.91  E-value=1.4e-24  Score=200.65  Aligned_cols=156  Identities=22%  Similarity=0.289  Sum_probs=112.5

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ..++.  ||+  .||+|||+.++ +|+||||+||+++.++.++|+|||++........  .......++..|+|||.+.+
T Consensus       102 ~~~~~--~i~--~~l~~lH~~~i-~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~  174 (286)
T cd07832         102 KSYMR--MLL--KGVAYMHANGI-MHRDLKPANLLISADGVLKIADFGLARLFSEEEP--RLYSHQVATRWYRAPELLYG  174 (286)
T ss_pred             HHHHH--HHH--HHHHHHHHCCe-ecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC--CccccccCcccccCceeeec
Confidence            34444  777  99999999999 9999999999999999999999999876543221  11223467889999999865


Q ss_pred             CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-----------------------CCCCCCCCC--Cccccc
Q psy16840        212 THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----------------------EDCEEPFRP--NLELLR  266 (413)
Q Consensus       212 ~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-----------------------~~~~~~~~~--~~~~~~  266 (413)
                      ...   ++.++||||+|+++|+|++|.+||.+........                       ........+  ......
T Consensus       175 ~~~---~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (286)
T cd07832         175 ARK---YDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIF  251 (286)
T ss_pred             ccc---CCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhC
Confidence            432   2789999999999999999988886543111000                       000000000  011122


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        267 DSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       267 ~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +..+..+.+++.+||..+|.+||++++++.+
T Consensus       252 ~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         252 PDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             CCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            3567899999999999999999999999764

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.91  E-value=8.4e-25  Score=198.89  Aligned_cols=145  Identities=18%  Similarity=0.286  Sum_probs=113.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCC-CCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTH-APIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~  217 (413)
                      ||+  .||+|||+.|+ +|+||+|+||+++.++.+||+|||++.......    ......++..|+|||.+.... .   
T Consensus       110 ~i~--~~l~~lH~~~i-~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~----~~~~~~~~~~y~~pe~~~~~~~~---  179 (258)
T cd06632         110 QIL--LGLEYLHDRNT-VHRDIKGANILVDTNGVVKLADFGMAKQVVEFS----FAKSFKGSPYWMAPEVIAQQGGY---  179 (258)
T ss_pred             HHH--HHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEccCccceeccccc----cccccCCCcceeCHHHhcCCCCC---
Confidence            677  99999999999 999999999999999999999999987653222    123456788999999987655 4   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                       +.++|+||||+++|++++|..||...............   ...+..+..+++.+.+++.+||+.+|.+||++.+++..
T Consensus       180 -~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         180 -GLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRS---KELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             -CchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhc---ccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence             88999999999999999999999764321111111111   11222345678999999999999999999999998753

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.91  E-value=1.7e-25  Score=213.88  Aligned_cols=149  Identities=15%  Similarity=0.135  Sum_probs=108.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC----------------------------
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND----------------------------  190 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----------------------------  190 (413)
                      |++  .||+|||++|+ +||||||+|||++.++.+||+|||++.........                            
T Consensus       109 qi~--~~L~~lH~~gi-vHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (360)
T cd05627         109 ETV--LAIDAIHQLGF-IHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETW  185 (360)
T ss_pred             HHH--HHHHHHHHCCe-EccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccc
Confidence            777  99999999999 99999999999999999999999998654211100                            


Q ss_pred             ----CcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q psy16840        191 ----SIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR  266 (413)
Q Consensus       191 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  266 (413)
                          .......+||+.|+|||++.+..+    +.++|||||||++|||++|..||.+.........+.........+. .
T Consensus       186 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~----~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~  260 (360)
T cd05627         186 KKNRRQLAYSTVGTPDYIAPEVFMQTGY----NKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPP-E  260 (360)
T ss_pred             cccccccccccCCCccccCHHHHcCCCC----CCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCC-C
Confidence                000123478999999999988776    8999999999999999999999977553322211111111111110 1


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCC---hhHHHH
Q psy16840        267 DSCEPFVLACMRDCWAEAPESRPD---FPTIRA  296 (413)
Q Consensus       267 ~~~~~~l~~li~~cl~~~P~~Rps---~~~i~~  296 (413)
                      ..+++++.++|.+++ .||.+|++   +.+++.
T Consensus       261 ~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~  292 (360)
T cd05627         261 VPISEKAKDLILRFC-TDSENRIGSNGVEEIKS  292 (360)
T ss_pred             CCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence            236789999999876 49999986   455543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.91  E-value=2e-24  Score=199.67  Aligned_cols=160  Identities=21%  Similarity=0.277  Sum_probs=115.1

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ++..+..++.  ||+  .||+|||+.++ +||||+|+||++++++.+||+|||++........   ......++..|+||
T Consensus        98 ~~~~~~~~~~--~i~--~~l~~LH~~~i-~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~aP  169 (286)
T cd07846          98 DESRVRKYLF--QIL--RGIEFCHSHNI-IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---VYTDYVATRWYRAP  169 (286)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCc-cccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc---ccCcccceeeccCc
Confidence            4444445555  777  99999999999 9999999999999999999999999876533221   12234578899999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--------------------------CCCCCCCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--------------------------EDCEEPFRP  260 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--------------------------~~~~~~~~~  260 (413)
                      |.+.+...   ++.++||||||+++|+|++|..||......+...                          .........
T Consensus       170 E~~~~~~~---~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T cd07846         170 ELLVGDTK---YGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIE  246 (286)
T ss_pred             HHhccccc---cCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcc
Confidence            99875432   2789999999999999999999986543111000                          000000000


Q ss_pred             CcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       261 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ......+.++..+.+++.+||..+|++||++.+++..
T Consensus       247 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         247 PLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             hHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence            0111124678899999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG1094|consensus

Probab=99.91  E-value=7.8e-25  Score=205.46  Aligned_cols=155  Identities=22%  Similarity=0.363  Sum_probs=119.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+||.+.++ |||||.++|||+++++++||+|||+++.+-........ ...+-.+.|||||.+..+++    
T Consensus       645 qia--sgmaYLes~nf-VHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vq-gr~vlpiRwmawEsillgkF----  716 (807)
T KOG1094|consen  645 QIA--SGMAYLESLNF-VHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQ-GRAVLPIRWMAWESILLGKF----  716 (807)
T ss_pred             HHH--HHHHHHHhhch-hhccccccceeecCcccEEecCcccccccccCCceeee-cceeeeeeehhHHHHHhccc----
Confidence            555  99999999999 99999999999999999999999999855333322221 22344689999999988888    


Q ss_pred             CccchhHHHHHHHHHHHh--CCCCCCCCCCCCCCCCC---CCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhH
Q psy16840        219 TQKADVYAFAVILHEIIG--RRGPFGGCGLYEPKGED---CEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~--g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~  293 (413)
                      |.+||||+||+++||+++  .+.||............   .....+......|.-||..+.++|.+||..|-.+||+|++
T Consensus       717 ttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~  796 (807)
T KOG1094|consen  717 TTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQ  796 (807)
T ss_pred             cchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHH
Confidence            999999999999999975  78899776533322221   1112222222334679999999999999999999999999


Q ss_pred             HHHHHHhh
Q psy16840        294 IRARLKHM  301 (413)
Q Consensus       294 i~~~l~~~  301 (413)
                      +...|...
T Consensus       797 lh~~lq~~  804 (807)
T KOG1094|consen  797 LHLFLQED  804 (807)
T ss_pred             HHHHHHHh
Confidence            98887653

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.91  E-value=1.8e-24  Score=204.89  Aligned_cols=153  Identities=20%  Similarity=0.279  Sum_probs=112.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC--CcccccccCcccccCcccccCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND--SIGEHQYYRSLLWKAPELLRDTHAPI  216 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~  216 (413)
                      ||+  .||.|||++|+ +||||||+||+++.++.+||+|||++.........  ........|+..|+|||.+.+...  
T Consensus       115 qi~--~~L~~LH~~~i-~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--  189 (337)
T cd07852         115 QLL--KALKYIHSGNV-IHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTR--  189 (337)
T ss_pred             HHH--HHHHHHHHCCe-ecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeecccc--
Confidence            777  99999999999 99999999999999999999999998765432211  112233467889999998765432  


Q ss_pred             CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--------------------------CCCCCCCCCCcccccCCCh
Q psy16840        217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--------------------------EDCEEPFRPNLELLRDSCE  270 (413)
Q Consensus       217 ~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~  270 (413)
                       ++.++||||||+++|+|++|+.||.+........                          ...............+.++
T Consensus       190 -~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (337)
T cd07852         190 -YTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKAS  268 (337)
T ss_pred             -ccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCC
Confidence             2789999999999999999999996543211000                          0000011111112223478


Q ss_pred             HHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        271 PFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       271 ~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .++.++|.+||+.+|.+|||+.+++..
T Consensus       269 ~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         269 DDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHHHHHhccCCcccccCHHHHhhC
Confidence            899999999999999999999999865

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0666|consensus

Probab=99.91  E-value=5.7e-25  Score=192.06  Aligned_cols=187  Identities=19%  Similarity=0.245  Sum_probs=131.6

Q ss_pred             hhhhhhhhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC---
Q psy16840         94 IASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR---  170 (413)
Q Consensus        94 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~---  170 (413)
                      +++.+.+|...++-|......          .+.-..+.+++.  ||+  .|+.|||++=+ +||||||.||||..+   
T Consensus       107 fdYAEhDL~~II~fHr~~~~~----------~lp~~mvKsilw--Qil--~Gv~YLH~NWv-lHRDLKPaNIlvmgdgpe  171 (438)
T KOG0666|consen  107 FDYAEHDLWHIIKFHRASKAK----------QLPRSMVKSILW--QIL--DGVHYLHSNWV-LHRDLKPANILVMGDGPE  171 (438)
T ss_pred             ehhhhhhHHHHHHHhccchhc----------cCCHHHHHHHHH--HHH--hhhHHHhhhhe-eeccCCcceEEEeccCCc
Confidence            444455666666555433221          223345567777  999  99999999988 999999999999877   


Q ss_pred             -eEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC
Q psy16840        171 -WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEP  249 (413)
Q Consensus       171 -~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~  249 (413)
                       |.|||+|||+++.+.+.-.........+-|.+|.|||.+.+...   ||.+.||||.|||+.||++-++-|.+......
T Consensus       172 rG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~h---YT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~  248 (438)
T KOG0666|consen  172 RGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARH---YTKAIDVWAIGCIFAELLTLEPLFKGREEKIK  248 (438)
T ss_pred             cCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhccccc---ccchhhhHHHHHHHHHHHccCccccchhhhcc
Confidence             99999999999988765444444555677999999999998764   59999999999999999998887765431110


Q ss_pred             CC---------CC---CCCCCC---CCccccc--------------------------CCChHHHHHHHHHHhccCCCCC
Q psy16840        250 KG---------ED---CEEPFR---PNLELLR--------------------------DSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       250 ~~---------~~---~~~~~~---~~~~~~~--------------------------~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      ..         ++   ...+..   |.+...|                          ..-++...+|+.++|..||.+|
T Consensus       249 ~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kR  328 (438)
T KOG0666|consen  249 TKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKR  328 (438)
T ss_pred             cCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhh
Confidence            00         00   000000   0000000                          1134558899999999999999


Q ss_pred             CChhHHHHHH
Q psy16840        289 PDFPTIRARL  298 (413)
Q Consensus       289 ps~~~i~~~l  298 (413)
                      .|+++.++..
T Consensus       329 Ita~qAleh~  338 (438)
T KOG0666|consen  329 ITAEQALEHP  338 (438)
T ss_pred             ccHHHHhccc
Confidence            9999988764

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.91  E-value=1.5e-24  Score=203.32  Aligned_cols=155  Identities=15%  Similarity=0.222  Sum_probs=109.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC----CcccccccCcccccCcccccCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND----SIGEHQYYRSLLWKAPELLRDTHA  214 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~  214 (413)
                      |++  .||+|||++++ +||||||+||+++.++.+||+|||.+.........    ........++..|+|||.+.....
T Consensus       109 ~l~--~~L~~LH~~~i-vH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  185 (314)
T cd08216         109 DVL--NALDYIHSKGF-IHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQ  185 (314)
T ss_pred             HHH--HHHHHHHHCCe-ecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCC
Confidence            777  99999999999 99999999999999999999999988654322111    111123356778999999876422


Q ss_pred             CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC--------------------CCC----CCCC-----Ccccc
Q psy16840        215 PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED--------------------CEE----PFRP-----NLELL  265 (413)
Q Consensus       215 ~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~--------------------~~~----~~~~-----~~~~~  265 (413)
                        .++.++|||||||++|||++|..||............                    ...    ...+     .....
T Consensus       186 --~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (314)
T cd08216         186 --GYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPY  263 (314)
T ss_pred             --CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcch
Confidence              2388999999999999999999999754311100000                    000    0000     00011


Q ss_pred             cCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        266 RDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       266 ~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ....++++.+++.+||..||++|||++++++..
T Consensus       264 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p  296 (314)
T cd08216         264 TRTFSEHFHQFVELCLQRDPESRPSASQLLNHS  296 (314)
T ss_pred             hhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence            123457899999999999999999999998753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG1027|consensus

Probab=99.91  E-value=3.9e-25  Score=215.48  Aligned_cols=148  Identities=20%  Similarity=0.299  Sum_probs=115.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcC-----CeEEEEeccccccccccccCCCcccccccCcccccCcccccCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-----RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTH  213 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  213 (413)
                      |++  +||++||+.+| |||||||+||||+.     ..+++|+|||+++.+..+........+..||-+|+|||++....
T Consensus       614 q~~--~GlaHLHsl~i-VHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~  690 (903)
T KOG1027|consen  614 QIA--SGLAHLHSLKI-VHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDR  690 (903)
T ss_pred             HHH--HHHHHHHhccc-ccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccc
Confidence            666  99999999999 99999999999976     26899999999998876665555566778999999999999988


Q ss_pred             CCCCCCccchhHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh
Q psy16840        214 APIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP  292 (413)
Q Consensus       214 ~~~~~~~~~Dv~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~  292 (413)
                      .    +.++||||+||++|+.++| .+||++.-  +...++......  +..+.+.-..+..+||.+|++.+|..||++.
T Consensus       691 ~----~~avDiFslGCvfyYvltgG~HpFGd~~--~R~~NIl~~~~~--L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~  762 (903)
T KOG1027|consen  691 K----TQAVDIFSLGCVFYYVLTGGSHPFGDSL--ERQANILTGNYT--LVHLEPLPDCEAKDLISRMLNPDPQLRPSAT  762 (903)
T ss_pred             c----CcccchhhcCceEEEEecCCccCCCchH--HhhhhhhcCccc--eeeeccCchHHHHHHHHHhcCCCcccCCCHH
Confidence            7    8899999999999999985 99997632  111122211111  1111111112899999999999999999999


Q ss_pred             HHHHH
Q psy16840        293 TIRAR  297 (413)
Q Consensus       293 ~i~~~  297 (413)
                      +|+.+
T Consensus       763 ~VL~H  767 (903)
T KOG1027|consen  763 DVLNH  767 (903)
T ss_pred             HHhCC
Confidence            99854

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.91  E-value=2.5e-24  Score=199.04  Aligned_cols=157  Identities=22%  Similarity=0.265  Sum_probs=114.5

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..+..++.  |++  .||.|||+.++ +|+||+|+||+++.++.+||+|||++........    .....++..|+|||
T Consensus       106 ~~~~~~~~~--~i~--~al~~LH~~~i-~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~PE  176 (287)
T cd07838         106 PETIKDLMR--QLL--RGVDFLHSHRI-VHRDLKPQNILVTSDGQVKIADFGLARIYSFEMA----LTSVVVTLWYRAPE  176 (287)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCe-eeccCChhhEEEccCCCEEEeccCcceeccCCcc----cccccccccccChH
Confidence            333444444  777  99999999999 9999999999999999999999999876532211    12334688899999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC----------------------CCCCCCCCcccc
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----------------------CEEPFRPNLELL  265 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~----------------------~~~~~~~~~~~~  265 (413)
                      .+.+...    +.++|+|||||++|+|++|..||.+....+.....                      ............
T Consensus       177 ~~~~~~~----~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (287)
T cd07838         177 VLLQSSY----ATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSF  252 (287)
T ss_pred             HhccCCC----CCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhh
Confidence            9988766    88999999999999999999998764421110000                      000000111111


Q ss_pred             cCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        266 RDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       266 ~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .+..++.+.+++.+||+.||.+||++.+++..
T Consensus       253 ~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         253 VPEICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             hhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence            23456788999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.91  E-value=2.1e-24  Score=199.66  Aligned_cols=157  Identities=19%  Similarity=0.286  Sum_probs=114.3

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  ||+  .||.|||++++ +||||+|+||++++++.+||+|||++........  .......++..|+|||+
T Consensus       100 ~~~~~~~~--~i~--~~l~~LH~~~i-~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~~PE~  172 (288)
T cd07833         100 DAVRSYIW--QLL--QAIAYCHSHNI-IHRDIKPENILVSESGVLKLCDFGFARALRARPA--SPLTDYVATRWYRAPEL  172 (288)
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCe-ecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--ccccCcccccCCcCCch
Confidence            33344444  777  99999999999 9999999999999999999999999876543321  11233467888999999


Q ss_pred             ccCC-CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC--------------C------CCCCC-CCCCCc----
Q psy16840        209 LRDT-HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK--------------G------EDCEE-PFRPNL----  262 (413)
Q Consensus       209 ~~~~-~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~--------------~------~~~~~-~~~~~~----  262 (413)
                      +.+. .+    +.++||||||+++|++++|..||.+.+..+..              .      ..... ...+..    
T Consensus       173 ~~~~~~~----~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (288)
T cd07833         173 LVGDTNY----GKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPES  248 (288)
T ss_pred             hcCCCCc----CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHH
Confidence            9877 44    89999999999999999999999754311000              0      00000 000000    


Q ss_pred             --ccccCCChHHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        263 --ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       263 --~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                        ...+..+++++.++|.+||..+|++|||+++++.
T Consensus       249 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         249 LERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence              0112345889999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=6.9e-25  Score=199.94  Aligned_cols=145  Identities=17%  Similarity=0.220  Sum_probs=110.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||+.++ +||||+|+||+++.++.+||+|||+++....       .....++..|+|||.+.+..+    
T Consensus       105 qi~--~aL~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-------~~~~~~~~~y~~pe~~~~~~~----  170 (260)
T cd05611         105 EVV--LGVEDLHQRGI-IHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-------NKKFVGTPDYLAPETILGVGD----  170 (260)
T ss_pred             HHH--HHHHHHHHCCe-ecCCCCHHHeEECCCCcEEEeecccceeccc-------cccCCCCcCccChhhhcCCCC----
Confidence            777  99999999999 9999999999999999999999999765321       223457888999999987765    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      +.++||||||+++|++++|..||................... .......+++.+.+++.+||+.+|++||++.++.+.+
T Consensus       171 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l  249 (260)
T cd05611         171 DKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINW-PEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK  249 (260)
T ss_pred             cchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCC-CCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence            899999999999999999999997644222111111111100 1112245789999999999999999999876554443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.91  E-value=1.4e-24  Score=198.76  Aligned_cols=157  Identities=18%  Similarity=0.278  Sum_probs=114.8

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe-EEEEeccccccccccccCCC-cccccccCcccccCcccc
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW-VLQVTDFGLHELRHCAENDS-IGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~  209 (413)
                      ..++.  ||+  .||.|||++|+ +|+||+|+||+++.++ .+||+|||++.......... .......++..|+|||.+
T Consensus       106 ~~~~~--ql~--~al~~LH~~~i-~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~  180 (268)
T cd06630         106 INYTE--QLL--RGLSYLHENQI-IHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVL  180 (268)
T ss_pred             HHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHh
Confidence            34444  777  99999999999 9999999999998775 69999999987654321111 112234678899999998


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .+..+    +.++||||+|+++|++++|..||.....................+..+...++++.+++.+||..+|.+||
T Consensus       181 ~~~~~----~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~  256 (268)
T cd06630         181 RGEQY----GRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRP  256 (268)
T ss_pred             ccCCC----CcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCc
Confidence            77665    88999999999999999999999654322111111000000111223356788999999999999999999


Q ss_pred             ChhHHHHH
Q psy16840        290 DFPTIRAR  297 (413)
Q Consensus       290 s~~~i~~~  297 (413)
                      ++.+++..
T Consensus       257 ~~~~ll~~  264 (268)
T cd06630         257 PSRELLKH  264 (268)
T ss_pred             CHHHHhcC
Confidence            99998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.91  E-value=8.2e-25  Score=199.66  Aligned_cols=145  Identities=17%  Similarity=0.265  Sum_probs=111.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++++ +|+||+|+||+++.++.+||+|||++.......    ......++..|+|||.+.+..+    
T Consensus       101 ~i~--~~l~~lH~~~~-~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----~~~~~~~~~~~~~PE~~~~~~~----  169 (262)
T cd05572         101 CVV--LAFEYLHNRGI-IYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----KTWTFCGTPEYVAPEIILNKGY----  169 (262)
T ss_pred             HHH--HHHHHHhhCCc-ccCCCCHHHEEEcCCCCEEEeeCCcccccCccc----ccccccCCcCccChhHhcCCCC----
Confidence            667  99999999999 999999999999999999999999987654321    1233467889999999877666    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCC--CCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC-----h
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGL--YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD-----F  291 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps-----~  291 (413)
                      +.++|+||||+++|++++|..||.....  .............+   ..+...++++.++|.+||..+|++||+     +
T Consensus       170 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~  246 (262)
T cd05572         170 DFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKL---EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGI  246 (262)
T ss_pred             CChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCC---CCCcccCHHHHHHHHHHccCChhhCcCCcccCH
Confidence            8899999999999999999999976441  11111111111111   123455889999999999999999999     7


Q ss_pred             hHHHHH
Q psy16840        292 PTIRAR  297 (413)
Q Consensus       292 ~~i~~~  297 (413)
                      +++++.
T Consensus       247 ~~l~~~  252 (262)
T cd05572         247 KDIKKH  252 (262)
T ss_pred             HHHhcC
Confidence            777653

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.91  E-value=7.3e-25  Score=199.26  Aligned_cols=145  Identities=16%  Similarity=0.254  Sum_probs=112.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||++++ +|+||+|+||+++.++.++|+|||++........   ......|++.|+|||++.+...    
T Consensus       109 ~l~--~~l~~lh~~~i-~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~----  178 (256)
T cd08218         109 QIC--LALKHVHDRKI-LHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE---LARTCIGTPYYLSPEICENRPY----  178 (256)
T ss_pred             HHH--HHHHHHHhCCE-ecCCCCHHHEEEcCCCCEEEeeccceeecCcchh---hhhhccCCccccCHHHhCCCCC----
Confidence            666  99999999999 9999999999999999999999999876532211   1123457888999999987766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+||||+++|++++|..||................ .+   ..+..++.++.++|.+||+.+|.+||++.+++..
T Consensus       179 ~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         179 NNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS-YP---PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             CCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC-CC---CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            889999999999999999999996543221111111111 11   1235678899999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.4e-24  Score=200.25  Aligned_cols=152  Identities=18%  Similarity=0.276  Sum_probs=112.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCC-CCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA-PIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~  217 (413)
                      |++  .||.|||++++ +||||||+||+++.++.++|+|||++.......   .......+++.|+|||.+..... ...
T Consensus       111 ql~--~~l~~lh~~~i-~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~  184 (280)
T cd06611         111 QML--EALNFLHSHKV-IHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL---QKRDTFIGTPYWMAPEVVACETFKDNP  184 (280)
T ss_pred             HHH--HHHHHHHHCCc-ccCCCChhhEEECCCCCEEEccCccchhhcccc---cccceeecchhhcCHHHHhhcccCCCC
Confidence            777  99999999999 999999999999999999999999876542211   11233467889999999864321 112


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ++.++||||||+++|+|++|..||............. ....+.. ..+..++.++.+++.+||..+|.+||++.+++..
T Consensus       185 ~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         185 YDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKIL-KSEPPTL-DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHh-cCCCCCc-CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            3789999999999999999999997643221111111 1111111 1234678899999999999999999999999775


Q ss_pred             H
Q psy16840        298 L  298 (413)
Q Consensus       298 l  298 (413)
                      -
T Consensus       263 ~  263 (280)
T cd06611         263 P  263 (280)
T ss_pred             h
Confidence            3

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.91  E-value=7.2e-25  Score=200.29  Aligned_cols=152  Identities=21%  Similarity=0.323  Sum_probs=113.7

Q ss_pred             hHhhhccccCCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      .+..++.  |++  .||+|||+ .++ +||||||+||+++.++.+||+|||.+........     ....++..|+|||.
T Consensus       101 ~~~~~~~--~l~--~~l~~lH~~~~i-~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~y~~PE~  170 (265)
T cd06605         101 ILGKIAV--AVL--KGLTYLHEKHKI-IHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA-----KTFVGTSSYMAPER  170 (265)
T ss_pred             HHHHHHH--HHH--HHHHHHcCCCCe-ecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-----hcccCChhccCHHH
Confidence            3334444  777  99999999 999 9999999999999999999999999865532211     12567889999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC-C---CCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK-G---EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      +.+..+    +.++||||||+++|++++|..||......... .   ........+..+  ...+++.+.++|.+||..+
T Consensus       171 ~~~~~~----~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~  244 (265)
T cd06605         171 IQGNDY----SVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLP--SGKFSPDFQDFVNLCLIKD  244 (265)
T ss_pred             HcCCCC----CchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCC--hhhcCHHHHHHHHHHcCCC
Confidence            988765    89999999999999999999999754210000 0   000111111111  1127889999999999999


Q ss_pred             CCCCCChhHHHHH
Q psy16840        285 PESRPDFPTIRAR  297 (413)
Q Consensus       285 P~~Rps~~~i~~~  297 (413)
                      |.+|||+.+++..
T Consensus       245 p~~Rpt~~~ll~~  257 (265)
T cd06605         245 PRERPSYKELLEH  257 (265)
T ss_pred             chhCcCHHHHhhC
Confidence            9999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.91  E-value=2.3e-24  Score=198.80  Aligned_cols=155  Identities=23%  Similarity=0.292  Sum_probs=114.5

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++++ +|+||||+||+++.++.+||+|||.+.......   .......++..|+|||.+.
T Consensus       100 ~~~~~~--~i~--~~l~~LH~~~i-~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~~PE~~~  171 (283)
T cd05118         100 IKSYLY--QLL--QGLAFCHSHGI-LHRDLKPENLLINTEGVLKLADFGLARSFGSPV---RPYTHYVVTRWYRAPELLL  171 (283)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-eecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---ccccCccCcccccCcHHHh
Confidence            344444  777  99999999999 999999999999999999999999987654332   1122345778899999987


Q ss_pred             CC-CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC---------------C----------CCCCCCCCccc
Q psy16840        211 DT-HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE---------------D----------CEEPFRPNLEL  264 (413)
Q Consensus       211 ~~-~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~---------------~----------~~~~~~~~~~~  264 (413)
                      +. ..    +.++|+||||+++|++++|+.||...+..+....               .          ...........
T Consensus       172 ~~~~~----~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (283)
T cd05118         172 GDKGY----STPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPK  247 (283)
T ss_pred             cCCCC----CchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHH
Confidence            65 33    8999999999999999999999966442111000               0          00000111112


Q ss_pred             ccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        265 LRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ..+.++.++.++|.+||+.||.+||++.+++..
T Consensus       248 ~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         248 LFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             hhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            224578899999999999999999999998754

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.91  E-value=1.5e-24  Score=205.52  Aligned_cols=160  Identities=23%  Similarity=0.352  Sum_probs=117.1

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||.|||++++ +||||||+||+++.++.+||+|||++.......   .......++..|+|||.+.
T Consensus       110 ~~~i~~--qi~--~aL~~LH~~~i-~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~  181 (337)
T cd07858         110 CQYFLY--QLL--RGLKYIHSANV-LHRDLKPSNLLLNANCDLKICDFGLARTTSEKG---DFMTEYVVTRWYRAPELLL  181 (337)
T ss_pred             HHHHHH--HHH--HHHHHHHhCCE-ecCCCCHHHEEEcCCCCEEECcCccccccCCCc---ccccccccccCccChHHHh
Confidence            344445  777  99999999999 999999999999999999999999987653221   1123345788999999886


Q ss_pred             CC-CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC---------------CCCCC-----------CCCCCCCCcc
Q psy16840        211 DT-HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE---------------PKGED-----------CEEPFRPNLE  263 (413)
Q Consensus       211 ~~-~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~---------------~~~~~-----------~~~~~~~~~~  263 (413)
                      +. ..    +.++|||||||++|+|++|..||.+.+...               .....           .....++...
T Consensus       182 ~~~~~----~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (337)
T cd07858         182 NCSEY----TTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFA  257 (337)
T ss_pred             cCCCC----CCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHH
Confidence            53 33    889999999999999999999997542100               00000           0000111112


Q ss_pred             cccCCChHHHHHHHHHHhccCCCCCCChhHHHHH--HHhhc
Q psy16840        264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR--LKHMK  302 (413)
Q Consensus       264 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~--l~~~~  302 (413)
                      ...+.+++++.+++.+||+.+|++|||+.+++..  +..+.
T Consensus       258 ~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         258 RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH  298 (337)
T ss_pred             HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence            2234678899999999999999999999999976  54443

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.91  E-value=1.3e-24  Score=203.29  Aligned_cols=164  Identities=18%  Similarity=0.237  Sum_probs=115.1

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCc--------ccccc
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI--------GEHQY  197 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~--------~~~~~  197 (413)
                      +....+..++.  |++  +||+|||++|+ +||||||+||++++++.+||+|||++...........        .....
T Consensus       112 ~~~~~~~~i~~--~l~--~al~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (311)
T cd07866         112 LTESQIKCYML--QLL--EGINYLHENHI-LHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNL  186 (311)
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccc
Confidence            34444445555  888  99999999999 9999999999999999999999999876543221111        11233


Q ss_pred             cCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC-------------------------
Q psy16840        198 YRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE-------------------------  252 (413)
Q Consensus       198 ~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~-------------------------  252 (413)
                      .+++.|+|||.+.+...   ++.++||||||+++|||++|.+||.+.+.......                         
T Consensus       187 ~~~~~y~aPE~~~~~~~---~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (311)
T cd07866         187 VVTRWYRPPELLLGERR---YTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGV  263 (311)
T ss_pred             eeccCcCChHHhhCCCc---cCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhccccccc
Confidence            56788999998865432   28899999999999999999999975432110000                         


Q ss_pred             CCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        253 DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .......+.........++.+.+++.+||..||.+|||+.+++..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~  308 (311)
T cd07866         264 HSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH  308 (311)
T ss_pred             ccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence            000011111111113455789999999999999999999988753

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.91  E-value=1.4e-24  Score=199.92  Aligned_cols=143  Identities=21%  Similarity=0.178  Sum_probs=107.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||+.|+ +||||+|+||+++.++.+||+|||++......    .......++..|+|||.+.+..+    
T Consensus       103 ql~--~~l~~lH~~~i-~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~----  171 (277)
T cd05577         103 QII--CGLEHLHQRRI-VYRDLKPENVLLDDHGNVRISDLGLAVELKGG----KKIKGRAGTPGYMAPEVLQGEVY----  171 (277)
T ss_pred             HHH--HHHHHHHhCCc-ccCCCCHHHEEECCCCCEEEccCcchhhhccC----CccccccCCCCcCCHHHhcCCCC----
Confidence            666  99999999999 99999999999999999999999998765321    11223456788999999887765    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~  293 (413)
                      +.++||||||+++|+|++|+.||.............. .........+..+++.+.++|.+||+.+|.+||++.+
T Consensus       172 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         172 DFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR-RTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             CchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh-ccccccccCCccCCHHHHHHHHHHccCChhHccCCCc
Confidence            8899999999999999999999976432111110000 0011111223567889999999999999999995444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.91  E-value=2.2e-24  Score=203.94  Aligned_cols=158  Identities=20%  Similarity=0.325  Sum_probs=114.3

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC-CcccccccCcccccCcccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~  209 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+||+++.++.+||+|||+++........ ........|+..|+|||.+
T Consensus       107 ~~~~~~--qi~--~aL~~LH~~gi-vH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~  181 (332)
T cd07857         107 FQSFIY--QIL--CGLKYIHSANV-LHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIM  181 (332)
T ss_pred             HHHHHH--HHH--HHHHHHHhCCc-ccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHH
Confidence            334444  777  99999999999 99999999999999999999999998765432211 1112345688999999987


Q ss_pred             cCC-CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---------------C-----------CCCCCCCCCc
Q psy16840        210 RDT-HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------------E-----------DCEEPFRPNL  262 (413)
Q Consensus       210 ~~~-~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---------------~-----------~~~~~~~~~~  262 (413)
                      .+. .+    +.++||||||+++|++++|..||..........               .           ..........
T Consensus       182 ~~~~~~----~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (332)
T cd07857         182 LSFQSY----TKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPF  257 (332)
T ss_pred             hCCCCC----CcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcch
Confidence            653 34    889999999999999999999997543110000               0           0000001111


Q ss_pred             ccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .......+..+.+++.+||+.||.+|||+.+++..
T Consensus       258 ~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~  292 (332)
T cd07857         258 ESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH  292 (332)
T ss_pred             HhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            12223467889999999999999999999999754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0669|consensus

Probab=99.90  E-value=7.6e-24  Score=179.99  Aligned_cols=175  Identities=19%  Similarity=0.227  Sum_probs=125.2

Q ss_pred             ccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcc-cccccCccc
Q psy16840        124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG-EHQYYRSLL  202 (413)
Q Consensus       124 i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~-~~~~~gt~~  202 (413)
                      +.++..-+..+|+  .++  +||.|+|.+.| +|||+||+|+||+.+|.+||+|||+++.+......... .+..+-|++
T Consensus       119 vr~sls~Ikk~Mk--~Lm--~GL~~iHr~ki-lHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLw  193 (376)
T KOG0669|consen  119 VRFSLSEIKKVMK--GLM--NGLYYIHRNKI-LHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLW  193 (376)
T ss_pred             ccccHHHHHHHHH--HHH--HHHHHHHHhhH-HhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeee
Confidence            3444555666777  888  99999999999 99999999999999999999999999876544332221 233455899


Q ss_pred             ccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-------CCCCCCCC-------------CCc
Q psy16840        203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-------EDCEEPFR-------------PNL  262 (413)
Q Consensus       203 y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-------~~~~~~~~-------------~~~  262 (413)
                      |.+||.+.+...   |+++.|||..|||+.||++|.+-+++.+......       .+....++             +++
T Consensus       194 YrppEllLG~r~---yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl  270 (376)
T KOG0669|consen  194 YRPPELLLGDRE---YGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPL  270 (376)
T ss_pred             cCCHHHhhcccc---cCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCC
Confidence            999999988754   4999999999999999999998887654211110       00000000             000


Q ss_pred             c-----cc-----cCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcccCc
Q psy16840        263 E-----LL-----RDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ  306 (413)
Q Consensus       263 ~-----~~-----~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~~~~  306 (413)
                      +     .+     +-.-.++..+|+.+++..||.+|+++++++++-....+...
T Consensus       271 ~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p  324 (376)
T KOG0669|consen  271 PKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP  324 (376)
T ss_pred             CcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence            0     00     01124578899999999999999999999887665555443

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.90  E-value=4.6e-24  Score=198.58  Aligned_cols=150  Identities=20%  Similarity=0.230  Sum_probs=109.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  +||.|||++|+ +||||||+||+++.++.+||+|||++........   ......+++.|+|||.+.+...   +
T Consensus       110 qi~--~al~~lH~~~i-~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~---~  180 (298)
T cd07841         110 MTL--RGLEYLHSNWI-LHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR---KMTHQVVTRWYRAPELLFGARH---Y  180 (298)
T ss_pred             HHH--HHHHHHHhCCe-eecCCChhhEEEcCCCCEEEccceeeeeccCCCc---cccccccceeeeCHHHHhCCCC---C
Confidence            777  99999999999 9999999999999999999999999876533211   1122345788999998865332   2


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC---------------------C--CCCCCCCCcccccCCChHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE---------------------D--CEEPFRPNLELLRDSCEPFVLA  275 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~---------------------~--~~~~~~~~~~~~~~~~~~~l~~  275 (413)
                      +.++|||||||++|+|++|.+||.+.........                     .  ................+..+.+
T Consensus       181 ~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (298)
T cd07841         181 GVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALD  260 (298)
T ss_pred             CcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHH
Confidence            8899999999999999999887765432110000                     0  0000001111122446788999


Q ss_pred             HHHHHhccCCCCCCChhHHHHH
Q psy16840        276 CMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       276 li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +|.+||..+|.+|||+.+++..
T Consensus       261 li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         261 LLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             HHHHHhcCCcccCcCHHHHhhC
Confidence            9999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.90  E-value=1.3e-24  Score=198.42  Aligned_cols=150  Identities=19%  Similarity=0.364  Sum_probs=114.8

Q ss_pred             hhhccccCCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        132 TYLMNFGDGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      ..++.  |++  .||+|||+ .++ +||||+|+||+++.++.++|+|||++.........   .....++..|+|||.+.
T Consensus       102 ~~~~~--~l~--~~l~~lh~~~~~-~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~~pE~~~  173 (264)
T cd06623         102 AYIAR--QIL--KGLDYLHTKRHI-IHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ---CNTFVGTVTYMSPERIQ  173 (264)
T ss_pred             HHHHH--HHH--HHHHHHhccCCC-ccCCCCHHHEEECCCCCEEEccCccceecccCCCc---ccceeecccccCHhhhC
Confidence            34444  677  99999999 999 99999999999999999999999998765332211   12345788999999988


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC---CCCCCCCCCCCCCcccccCC-ChHHHHHHHHHHhccCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE---PKGEDCEEPFRPNLELLRDS-CEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~~P~  286 (413)
                      +...    +.++|+||||+++|++++|..||.......   ...... ..   .....+.. ++..+.+++.+||..+|+
T Consensus       174 ~~~~----~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~l~~li~~~l~~~p~  245 (264)
T cd06623         174 GESY----SYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-DG---PPPSLPAEEFSPEFRDFISACLQKDPK  245 (264)
T ss_pred             CCCC----CchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-cC---CCCCCCcccCCHHHHHHHHHHccCChh
Confidence            7765    899999999999999999999997653101   000111 11   11112234 788999999999999999


Q ss_pred             CCCChhHHHHH
Q psy16840        287 SRPDFPTIRAR  297 (413)
Q Consensus       287 ~Rps~~~i~~~  297 (413)
                      +||++.++++.
T Consensus       246 ~R~~~~~ll~~  256 (264)
T cd06623         246 KRPSAAELLQH  256 (264)
T ss_pred             hCCCHHHHHhC
Confidence            99999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.90  E-value=4e-24  Score=198.28  Aligned_cols=149  Identities=17%  Similarity=0.212  Sum_probs=106.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||+.++ +|+||||+|||++.++.+||+|||+++.......   ......+++.|+|||.+.+...   +
T Consensus       111 qi~--~~L~~lH~~~i-~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~---~  181 (291)
T cd07870         111 QLL--RGLAYIHGQHI-LHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ---TYSSEVVTLWYRPPDVLLGATD---Y  181 (291)
T ss_pred             HHH--HHHHHHHhCCc-ccCCCChHHEEEcCCCcEEEeccccccccCCCCC---CCCCccccccccCCceeecCCC---C
Confidence            777  99999999999 9999999999999999999999999875422111   1223356889999999875431   2


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCC------------CC--------------CCCCCCCCCCccccc--CCCh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEP------------KG--------------EDCEEPFRPNLELLR--DSCE  270 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~------------~~--------------~~~~~~~~~~~~~~~--~~~~  270 (413)
                      +.++||||||+++|+|++|..||.+......            ..              ...............  -..+
T Consensus       182 ~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (291)
T cd07870         182 SSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRP  261 (291)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCC
Confidence            7889999999999999999999975431100            00              000000000000000  1235


Q ss_pred             HHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        271 PFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       271 ~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                      +.+.+++.+|+..||.+|||+.+++.
T Consensus       262 ~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         262 PKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             hHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            78999999999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.90  E-value=3.1e-24  Score=197.63  Aligned_cols=145  Identities=17%  Similarity=0.331  Sum_probs=113.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      +++  .||.|||++|+ +|+||+|+||+++.++.++|+|||++.......   .......++..|+|||.+.+...    
T Consensus       109 ~l~--~~l~~lh~~~i-~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~----  178 (277)
T cd06641         109 EIL--KGLDYLHSEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---IKRNTFVGTPFWMAPEVIKQSAY----  178 (277)
T ss_pred             HHH--HHHHHHccCCe-ecCCCCHHhEEECCCCCEEEeecccceecccch---hhhccccCCccccChhhhccCCC----
Confidence            777  99999999999 999999999999999999999999987653221   11223457888999999887665    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+|||||++|++++|..||............ .....+   ..+..++.++.+++.+||..+|.+||++.+++..
T Consensus       179 ~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         179 DSKADIWSLGITAIELAKGEPPHSELHPMKVLFLI-PKNNPP---TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHH-hcCCCC---CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            88999999999999999999999754322111111 111111   2235678899999999999999999999999885

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.90  E-value=2.3e-24  Score=197.87  Aligned_cols=153  Identities=20%  Similarity=0.382  Sum_probs=112.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++++ +||||+|+||+++.++.++|+|||++....... .........|+..|+|||.+.....  .+
T Consensus       116 qi~--~~l~~lH~~~i-~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~--~~  189 (272)
T cd06629         116 QVL--EGLAYLHSKGI-LHRDLKADNLLVDADGICKISDFGISKKSDDIY-DNDQNMSMQGSVFWMAPEVIHSYSQ--GY  189 (272)
T ss_pred             HHH--HHHHHHhhCCe-eecCCChhhEEEcCCCeEEEeeccccccccccc-cccccccccCCccccCHHHhccccC--CC
Confidence            777  99999999999 999999999999999999999999987543211 1111233457889999999876541  12


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCc-ccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL-ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+||||+++|++++|..||..................+.. ......++..+.+++.+||..+|.+|||+.+++..
T Consensus       190 ~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         190 SAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             CccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            88999999999999999999999653321111111111111111 11224578899999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.90  E-value=2.1e-24  Score=204.27  Aligned_cols=161  Identities=21%  Similarity=0.317  Sum_probs=115.7

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC-CcccccccCcccccCcccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~  209 (413)
                      +..++.  ||+  .||+|||++++ +||||||+||+++.++.+||+|||++......... ........|+..|+|||.+
T Consensus       109 ~~~i~~--qi~--~aL~~LH~~~i-vH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~  183 (334)
T cd07855         109 IRYFLY--QLL--RGLKYIHSANV-IHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELL  183 (334)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-ecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHh
Confidence            344444  777  99999999999 99999999999999999999999998765332211 1112234678899999998


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---------------C-----------CCCCCCCCCcc
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------------E-----------DCEEPFRPNLE  263 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---------------~-----------~~~~~~~~~~~  263 (413)
                      .+...   ++.++||||||+++|+|++|+.||.+.+......               .           ...........
T Consensus       184 ~~~~~---~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (334)
T cd07855         184 LSLPE---YTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWS  260 (334)
T ss_pred             cCCcc---cccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHH
Confidence            65332   2889999999999999999999997643211000               0           00000001111


Q ss_pred             cccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHH
Q psy16840        264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK  299 (413)
Q Consensus       264 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~  299 (413)
                      ......++++.+++.+||+.+|.+||++.+++....
T Consensus       261 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~  296 (334)
T cd07855         261 KIFPKASPEALDLLSQMLQFDPEERITVEQALQHPF  296 (334)
T ss_pred             HHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChh
Confidence            122456889999999999999999999999987543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.90  E-value=1.4e-24  Score=200.76  Aligned_cols=159  Identities=16%  Similarity=0.230  Sum_probs=115.5

Q ss_pred             hhhHhhhccccCCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ...+..++.  ||+  .||.|||+ .++ +||||||+||+++.++.+||+|||++......     ......+++.|+||
T Consensus       101 ~~~~~~~~~--~i~--~~l~~LH~~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~~~y~aP  170 (286)
T cd06622         101 EDVLRRITY--AVV--KGLKFLKEEHNI-IHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-----LAKTNIGCQSYMAP  170 (286)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhcCCE-eeCCCCHHHEEECCCCCEEEeecCCcccccCC-----ccccCCCccCccCc
Confidence            333444444  777  99999996 588 99999999999999999999999998654221     12234578889999


Q ss_pred             ccccCCCC--CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC--CCCCCCCCCcccccCCChHHHHHHHHHHhc
Q psy16840        207 ELLRDTHA--PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE--DCEEPFRPNLELLRDSCEPFVLACMRDCWA  282 (413)
Q Consensus       207 E~~~~~~~--~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (413)
                      |.+.+...  ...++.++|||||||++|++++|..||...........  .......+   ..+..+++++.++|.+||.
T Consensus       171 E~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~  247 (286)
T cd06622         171 ERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPP---TLPSGYSDDAQDFVAKCLN  247 (286)
T ss_pred             chhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCC---CCCcccCHHHHHHHHHHcc
Confidence            99865432  11247899999999999999999999965432111110  00111111   2335688999999999999


Q ss_pred             cCCCCCCChhHHHHHHH
Q psy16840        283 EAPESRPDFPTIRARLK  299 (413)
Q Consensus       283 ~~P~~Rps~~~i~~~l~  299 (413)
                      .+|.+||++.+++....
T Consensus       248 ~~p~~Rp~~~~l~~~~~  264 (286)
T cd06622         248 KIPNRRPTYAQLLEHPW  264 (286)
T ss_pred             cCcccCCCHHHHhcChh
Confidence            99999999999987543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG1025|consensus

Probab=99.90  E-value=3.9e-24  Score=207.72  Aligned_cols=182  Identities=25%  Similarity=0.364  Sum_probs=140.3

Q ss_pred             hhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccc
Q psy16840        100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFG  179 (413)
Q Consensus       100 ~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg  179 (413)
                      +|+||++.++..    +..+..+.+..            ||+  +||.|||.+++ +||||-.+||||.+-..+||.|||
T Consensus       783 ~LlDyvr~hr~~----igsq~lLnw~~------------QIA--kgM~YLe~qrl-VHrdLaaRNVLVksP~hvkitdfg  843 (1177)
T KOG1025|consen  783 CLLDYVREHRDN----IGSQDLLNWCY------------QIA--KGMKYLEEQRL-VHRDLAARNVLVKSPNHVKITDFG  843 (1177)
T ss_pred             hHHHHHHHhhcc----ccHHHHHHHHH------------HHH--HHHHHHHhcch-hhhhhhhhheeecCCCeEEEEecc
Confidence            778888876533    33333333333            555  99999999999 999999999999999999999999


Q ss_pred             cccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCC
Q psy16840        180 LHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPF  258 (413)
Q Consensus       180 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~  258 (413)
                      +++....+...... ....-.+.|||-|.+....+    +.++|||||||++||++| |..||.+.+..+... ....+.
T Consensus       844 la~ll~~d~~ey~~-~~gK~pikwmale~i~~~~~----thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~d-lle~ge  917 (1177)
T KOG1025|consen  844 LAKLLAPDEKEYSA-PGGKVPIKWMALESIRIRKY----THQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPD-LLEKGE  917 (1177)
T ss_pred             hhhccCcccccccc-cccccCcHHHHHHHhhccCC----CchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhH-HHhccc
Confidence            99987655433222 22223578999999998887    999999999999999998 999998866443332 222333


Q ss_pred             CCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcccCcccH
Q psy16840        259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNI  309 (413)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~~~~~~~  309 (413)
                      |...   |+.|+-+++.+|.+||..|+..||+|+++...+.++........
T Consensus       918 RLsq---PpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqryl  965 (1177)
T KOG1025|consen  918 RLSQ---PPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQRYL  965 (1177)
T ss_pred             cCCC---CCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcceEe
Confidence            3222   36799999999999999999999999999999999887766554

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.90  E-value=1.4e-24  Score=196.37  Aligned_cols=152  Identities=20%  Similarity=0.369  Sum_probs=114.1

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  +++  .||.|||+.|+ +||||+|+||+++.++.++|+|||.+........    .....++..|+|||.+.
T Consensus       100 ~~~i~~--~i~--~~l~~lh~~~i-~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~PE~~~  170 (253)
T cd05122         100 IAYVCK--ELL--KGLEYLHSNGI-IHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA----RNTMVGTPYWMAPEVIN  170 (253)
T ss_pred             HHHHHH--HHH--HHHHHhhcCCE-ecCCCCHHHEEEccCCeEEEeecccccccccccc----ccceecCCcccCHHHHc
Confidence            334444  666  99999999999 9999999999999999999999999876543221    23446788999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +...    +.++||||||+++|++++|..||...+.......... ...+... ....++..+.+++.+||..||.+|||
T Consensus       171 ~~~~----~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~t  244 (253)
T cd05122         171 GKPY----DYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGLR-NPEKWSDEFKDFLKKCLQKNPEKRPT  244 (253)
T ss_pred             CCCC----CccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCCcC-cccccCHHHHHHHHHHccCChhhCCC
Confidence            7765    8999999999999999999999976532111111111 1111111 11224788999999999999999999


Q ss_pred             hhHHHHH
Q psy16840        291 FPTIRAR  297 (413)
Q Consensus       291 ~~~i~~~  297 (413)
                      +.+++..
T Consensus       245 ~~~~l~~  251 (253)
T cd05122         245 AEQLLKH  251 (253)
T ss_pred             HHHHhcC
Confidence            9998753

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.90  E-value=2.3e-24  Score=199.58  Aligned_cols=149  Identities=19%  Similarity=0.265  Sum_probs=111.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||+.++ +|+||+|+||+++.++.++|+|||++.......     .....++..|+|||.+.+..+    
T Consensus       113 ~i~--~~L~~lH~~~i-~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~y~~pE~~~~~~~----  180 (287)
T cd06621         113 SVL--KGLSYLHSRKI-IHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL-----AGTFTGTSFYMAPERIQGKPY----  180 (287)
T ss_pred             HHH--HHHHHHHHCCc-ccCCCCHHHEEEecCCeEEEeeccccccccccc-----cccccCCccccCHHHhcCCCC----
Confidence            677  99999999999 999999999999999999999999986543211     123356788999999987766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCC--C--CCCCCCCCCCcccc---cCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPK--G--EDCEEPFRPNLELL---RDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~--~--~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      +.++||||||+++|+|++|..||.........  .  ........+.....   ....++.+.+++.+||..+|.+|||+
T Consensus       181 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  260 (287)
T cd06621         181 SITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTP  260 (287)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCH
Confidence            88999999999999999999999765320000  0  00000011111110   12356789999999999999999999


Q ss_pred             hHHHHHHH
Q psy16840        292 PTIRARLK  299 (413)
Q Consensus       292 ~~i~~~l~  299 (413)
                      .+++..-.
T Consensus       261 ~eil~~~~  268 (287)
T cd06621         261 WDMLEHPW  268 (287)
T ss_pred             HHHHhCcc
Confidence            99987543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.90  E-value=3.5e-24  Score=197.51  Aligned_cols=158  Identities=21%  Similarity=0.289  Sum_probs=113.1

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  +++  .||+|||++|+ +||||+|+||++++++.+||+|||++........   ......++..|+|||
T Consensus        97 ~~~~~~~~~--~i~--~~l~~LH~~~i-~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~aPE  168 (282)
T cd07829          97 PNLIKSIMY--QLL--RGLAYCHSHRI-LHRDLKPQNILINRDGVLKLADFGLARAFGIPLR---TYTHEVVTLWYRAPE  168 (282)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCc-ccCCCChheEEEcCCCCEEEecCCcccccCCCcc---ccCccccCcCcCChH
Confidence            333444444  777  99999999999 9999999999999999999999999876533211   112234567899999


Q ss_pred             cccCC-CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-----------------------CCCCCCC-CCCc
Q psy16840        208 LLRDT-HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----------------------EDCEEPF-RPNL  262 (413)
Q Consensus       208 ~~~~~-~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-----------------------~~~~~~~-~~~~  262 (413)
                      .+.+. ..    +.++||||||+++||+++|..||.+........                       ....... ....
T Consensus       169 ~~~~~~~~----~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (282)
T cd07829         169 ILLGSKHY----STAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDL  244 (282)
T ss_pred             HhcCCcCC----CccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccch
Confidence            98766 44    889999999999999999999997643111000                       0000000 0000


Q ss_pred             ccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ....+..+..+.+++.+||..+|++||++.+++..
T Consensus       245 ~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         245 EKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             HHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence            01113457889999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.90  E-value=6e-24  Score=199.23  Aligned_cols=155  Identities=18%  Similarity=0.321  Sum_probs=112.9

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..+..++.  ||+  .||.|||++|+ +||||+|+||+++.++.+||+|||++....       ......|+..|+|||
T Consensus       120 ~~~~~~~~~--qi~--~al~~LH~~gi-~H~dl~p~nili~~~~~~kL~dfg~~~~~~-------~~~~~~~~~~y~aPE  187 (313)
T cd06633         120 EVEIAAITH--GAL--QGLAYLHSHNM-IHRDIKAGNILLTEPGQVKLADFGSASKSS-------PANSFVGTPYWMAPE  187 (313)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCe-ecCCCChhhEEECCCCCEEEeecCCCcccC-------CCCCccccccccChh
Confidence            333344444  777  99999999999 999999999999999999999999975321       122346788999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      .+..... ..++.++||||||+++|+|++|..||................ .+..  ....++..+.+++.+||+.+|.+
T Consensus       188 ~~~~~~~-~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~l~~li~~~l~~~P~~  263 (313)
T cd06633         188 VILAMDE-GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND-SPTL--QSNEWTDSFRGFVDYCLQKIPQE  263 (313)
T ss_pred             hccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-CCCC--CccccCHHHHHHHHHHccCChhh
Confidence            9853211 012889999999999999999999987643222111111111 1111  12346778999999999999999


Q ss_pred             CCChhHHHHHH
Q psy16840        288 RPDFPTIRARL  298 (413)
Q Consensus       288 Rps~~~i~~~l  298 (413)
                      ||++.+++..-
T Consensus       264 Rp~~~~~l~~~  274 (313)
T cd06633         264 RPASAELLRHD  274 (313)
T ss_pred             CcCHHHHhcCc
Confidence            99999998653

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0984|consensus

Probab=99.90  E-value=5.4e-25  Score=181.73  Aligned_cols=139  Identities=17%  Similarity=0.167  Sum_probs=100.8

Q ss_pred             CCCCCchhhhhhhhhhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCe
Q psy16840         86 NGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNC  165 (413)
Q Consensus        86 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Ni  165 (413)
                      .|+.|.. ++.|..+|.-|.+.-.... ...+-...-.|+.            -++  +||.|||++--+||||+||+||
T Consensus       117 egdvwIc-ME~M~tSldkfy~~v~~~g-~~ipE~vlGkIa~------------Svv--~al~~L~~kL~vIHRDvKPsNi  180 (282)
T KOG0984|consen  117 EGDVWIC-MELMDTSLDKFYRKVLKKG-GTIPEDVLGKIAV------------SVV--HALEFLHSKLSVIHRDVKPSNI  180 (282)
T ss_pred             cccEEEe-HHHhhhhHHHHHHHHHhcC-CcCchHHhhHhHH------------HHH--HHHHHHHHHhhhhhccCCcceE
Confidence            4455554 7888888876665543221 1111111112333            334  8999999864449999999999


Q ss_pred             EEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q psy16840        166 VVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGC  244 (413)
Q Consensus       166 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~  244 (413)
                      |++.+|++|+||||++..+.++-.    .+-..|...|||||.+..+.....|+.+|||||||+.+.||.+++.||...
T Consensus       181 LIn~~GqVKiCDFGIsG~L~dSiA----kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  181 LINYDGQVKICDFGISGYLVDSIA----KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             EEccCCcEEEcccccceeehhhhH----HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence            999999999999999887644322    222356778999999987655556799999999999999999999999753

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.90  E-value=2.7e-24  Score=198.13  Aligned_cols=144  Identities=17%  Similarity=0.223  Sum_probs=110.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCC-CCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDT-HAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~  217 (413)
                      |++  .||.|||+.++ +||||||+||+++.++.+||+|||++......     ......|+..|+|||.+.+. .+   
T Consensus       105 ql~--~~l~~lH~~~i-~H~di~p~nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~---  173 (278)
T cd05606         105 EII--LGLEHMHNRFV-VYRDLKPANILLDEHGHVRISDLGLACDFSKK-----KPHASVGTHGYMAPEVLQKGVAY---  173 (278)
T ss_pred             HHH--HHHHHHHHCCE-EcCCCCHHHEEECCCCCEEEccCcCccccCcc-----CCcCcCCCcCCcCcHHhcCCCCC---
Confidence            666  99999999999 99999999999999999999999998654321     12234688999999998754 34   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC-CCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----Ch
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE-DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DF  291 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~  291 (413)
                       +.++||||+|+++|+|++|..||.+......... .......+   .++..+++.+.+++.+||..+|.+||     ++
T Consensus       174 -~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~  249 (278)
T cd05606         174 -DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV---ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGA  249 (278)
T ss_pred             -CcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCC---CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCH
Confidence             8899999999999999999999976432111110 00011111   22345788999999999999999999     88


Q ss_pred             hHHHHH
Q psy16840        292 PTIRAR  297 (413)
Q Consensus       292 ~~i~~~  297 (413)
                      .++++.
T Consensus       250 ~~ll~~  255 (278)
T cd05606         250 QEVKEH  255 (278)
T ss_pred             HHHHhC
Confidence            888754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.90  E-value=9.1e-25  Score=204.43  Aligned_cols=158  Identities=24%  Similarity=0.267  Sum_probs=112.8

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||+|||+.|+ +||||||+||+++.++.+||+|||++........   ......+++.|+|||.+
T Consensus       109 ~~~~~~~--qi~--~~l~~lH~~~i-~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~  180 (309)
T cd07845         109 QVKCLML--QLL--RGLQYLHENFI-IHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK---PMTPKVVTLWYRAPELL  180 (309)
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEECCCCCEEECccceeeecCCccC---CCCcccccccccChhhh
Confidence            3344444  777  99999999999 9999999999999999999999999876543211   11223457789999998


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-----------------------CCCCCC--Cccc
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC-----------------------EEPFRP--NLEL  264 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~-----------------------~~~~~~--~~~~  264 (413)
                      .+...   ++.++||||||+++|+|++|..||.+.+.........                       .....+  ....
T Consensus       181 ~~~~~---~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (309)
T cd07845         181 LGCTT---YTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKH  257 (309)
T ss_pred             cCCCC---cCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHH
Confidence            76432   2889999999999999999999997543211100000                       000000  0000


Q ss_pred             ccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        265 LRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      .....++.+.++|.+||..||++|||+.+++.+.
T Consensus       258 ~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~  291 (309)
T cd07845         258 KFPWLSEAGLRLLNFLLMYDPKKRATAEEALESS  291 (309)
T ss_pred             hccccCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence            0123578899999999999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.90  E-value=2.4e-24  Score=195.62  Aligned_cols=143  Identities=19%  Similarity=0.292  Sum_probs=113.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||+|||+.|+ +||||+|.||+++.++.+||+|||++......     ......++..|+|||.+.+..+    
T Consensus       111 ~l~--~al~~lh~~~i-~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~~~----  178 (256)
T cd08530         111 QLL--RGLQALHEQKI-LHRDLKSANILLVANDLVKIGDLGISKVLKKN-----MAKTQIGTPHYMAPEVWKGRPY----  178 (256)
T ss_pred             HHH--HHHHHHhhCCc-ccCCCCcceEEEecCCcEEEeeccchhhhccC-----CcccccCCccccCHHHHCCCCC----
Confidence            666  99999999999 99999999999999999999999998776432     1223457889999999987766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+||||+++|++++|..||................ .+   ..+..++.++.+++.+||..+|++||++.+++..
T Consensus       179 ~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         179 SYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGK-YP---PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CC---CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            889999999999999999999997654221111111111 11   1224678899999999999999999999998764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.90  E-value=4.5e-24  Score=197.90  Aligned_cols=155  Identities=18%  Similarity=0.258  Sum_probs=108.3

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  +||.|||++++ +||||||+||+++.++.+||+|||+++.......   ......++..|+|||.+.
T Consensus       105 ~~~~~~--ql~--~al~~lH~~~i-~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~aPE~~~  176 (291)
T cd07844         105 VRLFLF--QLL--RGLAYCHQRRV-LHRDLKPQNLLISERGELKLADFGLARAKSVPSK---TYSNEVVTLWYRPPDVLL  176 (291)
T ss_pred             HHHHHH--HHH--HHHHHHHhCCe-ecccCCHHHEEEcCCCCEEECccccccccCCCCc---cccccccccccCCcHHhh
Confidence            334444  777  99999999999 9999999999999999999999999865422111   112224578899999987


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC------------CCC----C------CCCCC----CCCccc
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEP------------KGE----D------CEEPF----RPNLEL  264 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~------------~~~----~------~~~~~----~~~~~~  264 (413)
                      +...   ++.++||||+|+++|+|++|..||.+......            ...    .      .....    ......
T Consensus       177 ~~~~---~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (291)
T cd07844         177 GSTE---YSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLIN  253 (291)
T ss_pred             cCcc---cCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHH
Confidence            5432   28899999999999999999999965431000            000    0      00000    000000


Q ss_pred             ccCCCh--HHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        265 LRDSCE--PFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       265 ~~~~~~--~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                      .....+  .++.+++.+||+.+|++|||+.+++.
T Consensus       254 ~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         254 HAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             hCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence            011233  78899999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.90  E-value=2.9e-24  Score=203.89  Aligned_cols=158  Identities=18%  Similarity=0.309  Sum_probs=114.9

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||+|||++++ +||||||+||+++.++.+||+|||+++.....      .....++..|+|||.+.
T Consensus       119 ~~~~~~--qi~--~aL~~LH~~~i-~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~  187 (342)
T cd07879         119 VQYLVY--QML--CGLKYIHSAGI-IHRDLKPGNLAVNEDCELKILDFGLARHADAE------MTGYVVTRWYRAPEVIL  187 (342)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC------CCCceeeecccChhhhc
Confidence            334444  788  99999999999 99999999999999999999999998754221      12345688899999987


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC--------------------------CCCCCCCCccc
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED--------------------------CEEPFRPNLEL  264 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~--------------------------~~~~~~~~~~~  264 (413)
                      +...   ++.++|||||||++|||++|+.||.+.+........                          .....+.....
T Consensus       188 ~~~~---~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (342)
T cd07879         188 NWMH---YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFST  264 (342)
T ss_pred             Cccc---cCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHH
Confidence            6321   288999999999999999999999764311100000                          00000111111


Q ss_pred             ccCCChHHHHHHHHHHhccCCCCCCChhHHHHH--HHhhc
Q psy16840        265 LRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR--LKHMK  302 (413)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~--l~~~~  302 (413)
                      ..+..++.+.++|.+||+.||.+||++.+++..  ++...
T Consensus       265 ~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         265 LFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             HhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence            123567889999999999999999999999854  54443

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.90  E-value=1.9e-24  Score=205.16  Aligned_cols=160  Identities=19%  Similarity=0.246  Sum_probs=112.0

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC-CeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      .+..++.  ||+  .||.|||+.|+ +||||||+||+++. ++.+||+|||++.................++..|+|||.
T Consensus       115 ~~~~~~~--qi~--~aL~~LH~~gi-vH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  189 (342)
T cd07854         115 HARLFMY--QLL--RGLKYIHSANV-LHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRL  189 (342)
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCc-ccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHH
Confidence            3344444  888  99999999999 99999999999974 568999999998765322111111122357888999998


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC-----------------------C--CCCCCCCCcc
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE-----------------------D--CEEPFRPNLE  263 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~-----------------------~--~~~~~~~~~~  263 (413)
                      +.+...   ++.++|||||||++|+|++|+.||.+.........                       .  .....+....
T Consensus       190 ~~~~~~---~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (342)
T cd07854         190 LLSPNN---YTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLR  266 (342)
T ss_pred             HhCccc---cCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHH
Confidence            754322   28899999999999999999999965431110000                       0  0000011111


Q ss_pred             cccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       264 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ......+.++.+++.+||..||.+|||+.+++..
T Consensus       267 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  300 (342)
T cd07854         267 DLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH  300 (342)
T ss_pred             HHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence            1224577889999999999999999999999854

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.90  E-value=2.8e-24  Score=195.21  Aligned_cols=148  Identities=20%  Similarity=0.334  Sum_probs=114.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      +++  .||+|||+.++ +|+||+|+||+++.++.+||+|||.+......... .......++..|+|||.+.+...    
T Consensus       109 ~l~--~~l~~lh~~~~-~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~y~~pE~~~~~~~----  180 (260)
T cd06606         109 QIL--EGLAYLHSNGI-VHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG-EGTGSVRGTPYWMAPEVIRGEEY----  180 (260)
T ss_pred             HHH--HHHHHHHHCCc-cccCCCHHHEEEcCCCCEEEcccccEEeccccccc-ccccCCCCCccccCHhhhcCCCC----
Confidence            666  99999999999 99999999999999999999999998776433221 01223467889999999987765    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCC-CCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEP-KGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|++++|..||........ .......   ......+...+..+.+++.+||+.+|.+||++.+++..
T Consensus       181 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         181 GRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSS---GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhcccc---CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence            8999999999999999999999976441100 0011111   11122345678899999999999999999999999764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.90  E-value=9.2e-24  Score=194.93  Aligned_cols=149  Identities=21%  Similarity=0.327  Sum_probs=109.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||++++ +|+||+|+||+++.++.++|+|||++........    .....++..|+|||.+.....   +
T Consensus       107 ~l~--~~l~~Lh~~~i-~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~---~  176 (283)
T cd07830         107 QIL--QGLAHIHKHGF-FHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP----YTDYVSTRWYRAPEILLRSTS---Y  176 (283)
T ss_pred             HHH--HHHHHHHHCCc-ccCCCChhhEEEcCCCCEEEeecccceeccCCCC----cCCCCCcccccCceeeecCcC---c
Confidence            677  99999999999 9999999999999999999999999876532211    123457888999998865432   2


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-------------------------CCCCCCCCCCcccccCCChHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-------------------------EDCEEPFRPNLELLRDSCEPFV  273 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~l  273 (413)
                      +.++|+||||+++|++++|..||..........                         ..................++.+
T Consensus       177 ~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (283)
T cd07830         177 SSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEA  256 (283)
T ss_pred             CCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHH
Confidence            889999999999999999999996543211100                         0000000011111112346889


Q ss_pred             HHHHHHHhccCCCCCCChhHHHHH
Q psy16840        274 LACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       274 ~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .+++.+||..+|++|||+++++..
T Consensus       257 ~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         257 IDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             HHHHHHhcccCcccCCCHHHHhhC
Confidence            999999999999999999998753

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.90  E-value=5.1e-24  Score=199.23  Aligned_cols=163  Identities=21%  Similarity=0.278  Sum_probs=113.1

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC-cccccccCcccccC
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLLWKA  205 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~a  205 (413)
                      ....+..++.  ||+  .||+|||++|+ +|+||||+||+++.++.+||+|||++.......... .......++..|+|
T Consensus       117 ~~~~~~~i~~--qi~--~al~~lH~~~i-~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~a  191 (310)
T cd07865         117 TLSEIKKVMK--MLL--NGLYYIHRNKI-LHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRP  191 (310)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCe-eccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccC
Confidence            3344445555  777  99999999999 999999999999999999999999987654322211 11223456788999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---------------C----CC------CCCCCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------------E----DC------EEPFRP  260 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---------------~----~~------~~~~~~  260 (413)
                      ||.+.+...   ++.++||||||+++|+|++|..||.+........               .    ..      ......
T Consensus       192 PE~~~~~~~---~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (310)
T cd07865         192 PELLLGERD---YGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKR  268 (310)
T ss_pred             cHHhcCCcc---cCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccch
Confidence            998866432   2789999999999999999999986543110000               0    00      000000


Q ss_pred             Cc-c-cccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        261 NL-E-LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       261 ~~-~-~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .. . ......++.+.++|.+||..||.+|||++++++.
T Consensus       269 ~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         269 KVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             hhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            00 0 0011235678899999999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.90  E-value=2.5e-24  Score=195.55  Aligned_cols=145  Identities=19%  Similarity=0.294  Sum_probs=113.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      +++  .||.|||+.|+ +|+||+|+||+++.++.++|+|||++.......   .......|++.|+|||.+.+...    
T Consensus       111 ~i~--~~l~~lh~~~~-~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~y~~pe~~~~~~~----  180 (258)
T cd08215         111 QLC--LALKYLHSRKI-LHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV---DLAKTVVGTPYYLSPELCQNKPY----  180 (258)
T ss_pred             HHH--HHHHHHHhCCE-ecccCChHHeEEcCCCcEEECCccceeecccCc---ceecceeeeecccChhHhccCCC----
Confidence            666  99999999999 999999999999999999999999987653322   12233467889999999887766    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|+||+|+++|+|++|..||................    ...++..++..+.+++.+||..+|++|||+.+++..
T Consensus       181 ~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         181 NYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ----YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             CccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            889999999999999999999997654222111111111    112334678899999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.90  E-value=2.3e-24  Score=196.64  Aligned_cols=158  Identities=18%  Similarity=0.218  Sum_probs=114.8

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC-----CcccccccCccccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-----SIGEHQYYRSLLWK  204 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-----~~~~~~~~gt~~y~  204 (413)
                      .+..++.  |++  .||+|||+.++ +||||+|+||+++.++.+||+|||++.........     ........++..|+
T Consensus        94 ~~~~i~~--qi~--~~L~~lH~~~i-~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (265)
T cd05579          94 VARIYIA--EIV--LALEYLHSNGI-IHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYI  168 (265)
T ss_pred             HHHHHHH--HHH--HHHHHHHHcCe-ecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCcccc
Confidence            3344444  777  99999999999 99999999999999999999999998754322110     11223345788899


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      |||...+...    +.++||||||+++|++++|..||..................+  +. ....++.+.+++.+||+.+
T Consensus       169 ~Pe~~~~~~~----~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~i~~~l~~~  241 (265)
T cd05579         169 APEVILGQGH----SKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEW--PE-DVEVSDEAIDLISKLLVPD  241 (265)
T ss_pred             CHHHhcCCCC----CcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCC--Cc-cccCCHHHHHHHHHHhcCC
Confidence            9999887765    889999999999999999999997544222111111111111  10 0124889999999999999


Q ss_pred             CCCCCChhHHHHHHH
Q psy16840        285 PESRPDFPTIRARLK  299 (413)
Q Consensus       285 P~~Rps~~~i~~~l~  299 (413)
                      |.+|||+..+.+.|+
T Consensus       242 p~~Rpt~~~~~~~l~  256 (265)
T cd05579         242 PEKRLGAKSIEEIKN  256 (265)
T ss_pred             HhhcCCCccHHHHhc
Confidence            999999966655544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.90  E-value=3.3e-24  Score=198.01  Aligned_cols=149  Identities=21%  Similarity=0.325  Sum_probs=109.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||+.|+ +||||||+||++++++.+||+|||++........   ......++..|+|||++.+...   +
T Consensus       108 qi~--~~l~~lH~~~i-~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~---~  178 (284)
T cd07836         108 QLL--KGIAFCHENRV-LHRDLKPQNLLINKRGELKLADFGLARAFGIPVN---TFSNEVVTLWYRAPDVLLGSRT---Y  178 (284)
T ss_pred             HHH--HHHHHHHHCCe-eeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc---ccccccccccccChHHhcCCCC---C
Confidence            777  99999999999 9999999999999999999999999875432211   1123356788999998866432   2


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC----------------CCCCCCC--------CcccccCCChHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----------------CEEPFRP--------NLELLRDSCEPFVL  274 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~----------------~~~~~~~--------~~~~~~~~~~~~l~  274 (413)
                      +.++||||||+++|++++|..||.+.+..+.....                .......        ......+.+++.+.
T Consensus       179 ~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (284)
T cd07836         179 STSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGI  258 (284)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHH
Confidence            78999999999999999999999765422110000                0000000        00111234678899


Q ss_pred             HHHHHHhccCCCCCCChhHHHH
Q psy16840        275 ACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       275 ~li~~cl~~~P~~Rps~~~i~~  296 (413)
                      +++.+||+.||.+||++.+++.
T Consensus       259 ~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         259 DLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             HHHHHHhcCCcccCCCHHHHhc
Confidence            9999999999999999999875

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.90  E-value=3.2e-24  Score=195.04  Aligned_cols=145  Identities=19%  Similarity=0.323  Sum_probs=111.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe-EEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW-VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      |++  .||.|||+.++ +|+||||+||++++++ .+||+|||.+........   ......|++.|+|||.+.+...   
T Consensus       109 ~l~--~~l~~lh~~~i-~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~---  179 (257)
T cd08225         109 QIS--LGLKHIHDRKI-LHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME---LAYTCVGTPYYLSPEICQNRPY---  179 (257)
T ss_pred             HHH--HHHHHHHHCCc-ccccCCHHHEEEcCCCCeEEecccccchhccCCcc---cccccCCCccccCHHHHcCCCC---
Confidence            666  99999999999 9999999999999875 579999999876532211   1223457889999999877766   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                       +.++|+||||+++|++++|..||.................    ....+..+..+.+++.+||..+|++|||+.+++..
T Consensus       180 -~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         180 -NNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYF----APISPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             -CchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccC----CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence             8999999999999999999999976442221111111111    11224577899999999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.90  E-value=2e-24  Score=201.29  Aligned_cols=161  Identities=19%  Similarity=0.249  Sum_probs=114.2

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ++..+..++.  ||+  .||+|||+.|+ +||||||+||++++++.+||+|||++.........  ......++..|+||
T Consensus       114 ~~~~~~~i~~--qi~--~aL~~LH~~~i-~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~y~~P  186 (302)
T cd07864         114 SEDHIKSFMK--QLL--EGLNYCHKKNF-LHRDIKCSNILLNNKGQIKLADFGLARLYNSEESR--PYTNKVITLWYRPP  186 (302)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEECCCCcEEeCcccccccccCCccc--ccccceeccCccCh
Confidence            3444455555  777  99999999999 99999999999999999999999998765432211  11122457789999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---------------CCCC----------CCCCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------------EDCE----------EPFRPN  261 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---------------~~~~----------~~~~~~  261 (413)
                      |.+.+...   .+.++|||||||++|+|++|+.||...+......               ....          ......
T Consensus       187 E~~~~~~~---~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (302)
T cd07864         187 ELLLGEER---YGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRR  263 (302)
T ss_pred             HHhcCCCC---CCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccc
Confidence            98865432   2789999999999999999999997533111000               0000          000001


Q ss_pred             cccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .......+++.+.+++.+||..+|.+||++.+++..
T Consensus       264 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         264 LREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             hhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            111123468899999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0586|consensus

Probab=99.90  E-value=5.4e-24  Score=201.89  Aligned_cols=146  Identities=18%  Similarity=0.259  Sum_probs=125.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  +|++|||++++ ||||||++|||++.+..+||+|||++.++....    ...+.+|++.|.|||++.+..+.   
T Consensus       163 q~v--saveYcH~k~i-vHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~----~lqt~cgsppyAaPEl~~g~~y~---  232 (596)
T KOG0586|consen  163 QIV--SAVEYCHSKNI-VHRDLKAENILLDENMNIKIADFGFSTFFDYGL----MLQTFCGSPPYAAPELFNGKKYD---  232 (596)
T ss_pred             HHH--HHHHHHhhcce-eccccchhhcccccccceeeeccccceeecccc----cccccCCCCCccChHhhcCcccC---
Confidence            777  99999999999 999999999999999999999999998875332    24567999999999999999875   


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ++.+|+||+|+++|-++.|..||.+....+.........++-+     -.++.+..++|.+++-.+|.+|++.+++...-
T Consensus       233 gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp-----~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~  307 (596)
T KOG0586|consen  233 GPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIP-----FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDR  307 (596)
T ss_pred             CcceehhhhhhhheeeeecccccCCcccccccchheeeeeccc-----ceeechhHHHHHHhhccCccccCCHHHhhhhc
Confidence            8999999999999999999999999877666665555555433     34677899999999999999999999998764


Q ss_pred             H
Q psy16840        299 K  299 (413)
Q Consensus       299 ~  299 (413)
                      +
T Consensus       308 W  308 (596)
T KOG0586|consen  308 W  308 (596)
T ss_pred             c
Confidence            4

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.90  E-value=3.8e-24  Score=197.72  Aligned_cols=151  Identities=22%  Similarity=0.325  Sum_probs=109.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||+.|+ +|+||+|+||++++++.+||+|||++........  .......++..|+|||.+.+...   +
T Consensus       108 ~i~--~al~~LH~~~~-~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~---~  179 (287)
T cd07840         108 QLL--EGLQYLHSNGI-LHRDIKGSNILINNDGVLKLADFGLARPYTKRNS--ADYTNRVITLWYRPPELLLGATR---Y  179 (287)
T ss_pred             HHH--HHHHHHHHCCc-eeccCcHHHeEEcCCCCEEEccccceeeccCCCc--ccccccccccccCCceeeEcccc---C
Confidence            666  99999999999 9999999999999999999999999876543221  11223356788999998765432   2


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC---------------C----CCCCCCC------Cccc-ccCCChHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE---------------D----CEEPFRP------NLEL-LRDSCEPF  272 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~---------------~----~~~~~~~------~~~~-~~~~~~~~  272 (413)
                      +.++||||||+++|+|++|..||...........               .    .....++      .... ....+++.
T Consensus       180 ~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (287)
T cd07840         180 GPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPS  259 (287)
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHH
Confidence            8899999999999999999999975432110000               0    0000000      0001 11224889


Q ss_pred             HHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        273 VLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       273 l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.+++.+||..+|.+||++.+++..
T Consensus       260 ~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         260 ALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhhC
Confidence            9999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.90  E-value=3e-24  Score=199.19  Aligned_cols=154  Identities=15%  Similarity=0.266  Sum_probs=115.3

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  |++  .||+|||+.|+ +||||+|+||+++.++.++|+|||++.......   .......|++.|+|||.+
T Consensus       117 ~~~~~~~--ql~--~~l~~lH~~gi-vH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~y~~pE~~  188 (292)
T cd06657         117 QIAAVCL--AVL--KALSVLHAQGV-IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---PRRKSLVGTPYWMAPELI  188 (292)
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCe-ecCCCCHHHEEECCCCCEEEcccccceeccccc---ccccccccCccccCHHHh
Confidence            3344444  777  99999999999 999999999999999999999999876543221   112334678899999998


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .+..+    +.++|+||+|+++|++++|..||.+......... ......+.... ...+++.+.+++.+||..+|.+||
T Consensus       189 ~~~~~----~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~P~~R~  262 (292)
T cd06657         189 SRLPY----GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM-IRDNLPPKLKN-LHKVSPSLKGFLDRLLVRDPAQRA  262 (292)
T ss_pred             cCCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhhCCcccCC-cccCCHHHHHHHHHHHhCCcccCc
Confidence            77665    8899999999999999999999976432111110 01111111111 135678899999999999999999


Q ss_pred             ChhHHHHH
Q psy16840        290 DFPTIRAR  297 (413)
Q Consensus       290 s~~~i~~~  297 (413)
                      ++.+++..
T Consensus       263 ~~~~ll~~  270 (292)
T cd06657         263 TAAELLKH  270 (292)
T ss_pred             CHHHHhcC
Confidence            99999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.90  E-value=2.7e-24  Score=199.37  Aligned_cols=140  Identities=17%  Similarity=0.214  Sum_probs=110.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||+.|+ +||||+|+|||++.++.+||+|||++......      .....+++.|+|||.+.+...    
T Consensus       109 qil--~~l~~lH~~~i-~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~----  175 (290)
T cd05580         109 QVV--LALEYLHSLDI-VYRDLKPENLLLDSDGYIKITDFGFAKRVKGR------TYTLCGTPEYLAPEIILSKGY----  175 (290)
T ss_pred             HHH--HHHHHHHHCCE-ecCCCCHHHEEECCCCCEEEeeCCCccccCCC------CCCCCCCccccChhhhcCCCC----
Confidence            777  99999999999 99999999999999999999999998765322      233467899999999877665    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----ChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~  293 (413)
                      +.++||||||+++|+|++|..||...............  .+   .++...++.+.+++.+||..||.+||     ++++
T Consensus       176 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~---~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~  250 (290)
T cd05580         176 GKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG--KV---RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVND  250 (290)
T ss_pred             CccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--Cc---cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHH
Confidence            88999999999999999999999764421111111111  11   12345688999999999999999998     6666


Q ss_pred             HHH
Q psy16840        294 IRA  296 (413)
Q Consensus       294 i~~  296 (413)
                      ++.
T Consensus       251 l~~  253 (290)
T cd05580         251 IKN  253 (290)
T ss_pred             HHc
Confidence            654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0696|consensus

Probab=99.90  E-value=7.8e-24  Score=191.35  Aligned_cols=139  Identities=22%  Similarity=0.284  Sum_probs=114.1

Q ss_pred             ccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCC
Q psy16840        137 FGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI  216 (413)
Q Consensus       137 ~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  216 (413)
                      .++|+  -||-|||++|| |.||||.+||++|.+|++||+|||+++.-   -.....+.+.+|||-|+|||++...+|  
T Consensus       456 AaEia--igLFFLh~kgI-iYRDLKLDNvmLd~eGHiKi~DFGmcKEn---i~~~~TTkTFCGTPdYiAPEIi~YqPY--  527 (683)
T KOG0696|consen  456 AAEIA--IGLFFLHSKGI-IYRDLKLDNVMLDSEGHIKIADFGMCKEN---IFDGVTTKTFCGTPDYIAPEIIAYQPY--  527 (683)
T ss_pred             hHHHH--HHhhhhhcCCe-eeeeccccceEeccCCceEeeeccccccc---ccCCcceeeecCCCcccccceEEeccc--
Confidence            34666  89999999999 99999999999999999999999998752   223334567899999999999998887  


Q ss_pred             CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       217 ~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                        +.++|.||||++||||+.|++||.+....+....+.....     ..|...+.+...+....+.+.|.+|..
T Consensus       528 --gksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv-----syPKslSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  528 --GKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV-----SYPKSLSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             --ccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC-----cCcccccHHHHHHHHHHhhcCCccccC
Confidence              9999999999999999999999998664443333322221     134678889999999999999999954

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.90  E-value=1.5e-23  Score=194.73  Aligned_cols=155  Identities=17%  Similarity=0.235  Sum_probs=110.7

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC-CeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      ..++.  ||+  .||+|||++++ +||||+|+||+++. ++.+||+|||++.......   .......+++.|+|||.+.
T Consensus       105 ~~~~~--qi~--~aL~~LH~~~i-~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~y~~PE~~~  176 (294)
T PLN00009        105 KTYLY--QIL--RGIAYCHSHRV-LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV---RTFTHEVVTLWYRAPEILL  176 (294)
T ss_pred             HHHHH--HHH--HHHHHHHhCCe-eCCCCCcceEEEECCCCEEEEcccccccccCCCc---cccccCceeecccCHHHHh
Confidence            34444  777  99999999999 99999999999985 5689999999987543221   1112335678999999886


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC-----------C------------CCCC-CCCCccccc
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE-----------D------------CEEP-FRPNLELLR  266 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~-----------~------------~~~~-~~~~~~~~~  266 (413)
                      +...   ++.++||||||+++|+|++|..||...........           .            .... .........
T Consensus       177 ~~~~---~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (294)
T PLN00009        177 GSRH---YSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVV  253 (294)
T ss_pred             CCCC---CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhC
Confidence            6432   28899999999999999999999975421100000           0            0000 001111122


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        267 DSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       267 ~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ...++++.+++.+||+.+|++||++.+++..
T Consensus       254 ~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        254 PTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             cCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            4578889999999999999999999999864

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.90  E-value=3.3e-24  Score=195.18  Aligned_cols=153  Identities=14%  Similarity=0.172  Sum_probs=115.3

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  ||+  +||.|||++++ +|+||+|+||++++++.++|+|||++.......    ......|+..|+|||
T Consensus        99 ~~~~~~~~~--~i~--~~l~~lh~~~i-~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~----~~~~~~~~~~y~~PE  169 (258)
T cd05578          99 EEQVKFWIC--EIV--LALEYLHSKGI-IHRDIKPDNILLDEQGHVHITDFNIATKVTPDT----LTTSTSGTPGYMAPE  169 (258)
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCe-eccCCCHHHeEEcCCCCEEEeecccccccCCCc----cccccCCChhhcCHH
Confidence            333444555  788  99999999999 999999999999999999999999987653221    123346788999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      .+.+...    +.++|+||||+++|++++|..||........... .. .........+...++.+.++|.+||..||.+
T Consensus       170 ~~~~~~~----~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~  243 (258)
T cd05578         170 VLCRQGY----SVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI-RA-KQETADVLYPATWSTEAIDAINKLLERDPQK  243 (258)
T ss_pred             HHcccCC----CCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH-HH-HhccccccCcccCcHHHHHHHHHHccCChhH
Confidence            9987765    8999999999999999999999986542111110 00 0000112233567889999999999999999


Q ss_pred             CCCh--hHHH
Q psy16840        288 RPDF--PTIR  295 (413)
Q Consensus       288 Rps~--~~i~  295 (413)
                      ||++  ++++
T Consensus       244 R~~~~~~~l~  253 (258)
T cd05578         244 RLGDNLKDLK  253 (258)
T ss_pred             cCCccHHHHh
Confidence            9999  6554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.90  E-value=3.2e-24  Score=203.66  Aligned_cols=157  Identities=19%  Similarity=0.314  Sum_probs=115.2

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  |++  +||+|||+.|+ +||||||+||+++.++.+||+|||++......      .....++..|+||
T Consensus       116 ~~~~~~~~~~--ql~--~aL~~LH~~gi-~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------~~~~~~~~~y~aP  184 (343)
T cd07851         116 SDDHIQFLVY--QIL--RGLKYIHSAGI-IHRDLKPSNIAVNEDCELKILDFGLARHTDDE------MTGYVATRWYRAP  184 (343)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCe-ecCCCCHHHeEECCCCCEEEcccccccccccc------ccCCcccccccCH
Confidence            3334444555  788  99999999999 99999999999999999999999998764321      2334678889999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC--------------------------CCCCCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED--------------------------CEEPFRP  260 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~--------------------------~~~~~~~  260 (413)
                      |.+.+...   ++.++||||||+++|++++|+.||.+.........+                          .....++
T Consensus       185 E~~~~~~~---~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (343)
T cd07851         185 EIMLNWMH---YNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKK  261 (343)
T ss_pred             HHHhCCCC---CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCC
Confidence            99865322   288999999999999999999999754321110000                          0000011


Q ss_pred             CcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       261 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .........++.+.+++.+||+.+|.+|||+.+++..
T Consensus       262 ~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         262 DFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             CHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence            1111223468899999999999999999999999864

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.90  E-value=7.5e-24  Score=190.45  Aligned_cols=132  Identities=15%  Similarity=0.099  Sum_probs=103.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||++++ +||||||+||+++.++.++++|||.+......      .....++..|+|||.+.+...    
T Consensus        93 ql~--~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~----  159 (237)
T cd05576          93 EMV--VALDALHREGI-VCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS------CDGEAVENMYCAPEVGGISEE----  159 (237)
T ss_pred             HHH--HHHHHHHhCCe-eccCCCHHHEEEcCCCCEEEecccchhccccc------cccCCcCccccCCcccCCCCC----
Confidence            677  99999999999 99999999999999999999999987554221      122345677999999877666    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP  292 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~  292 (413)
                      +.++||||+|+++||+++|..|+........      .....   .++..+++.+.+++.+||+.||.+||++.
T Consensus       160 ~~~~DvwslG~il~el~~g~~~~~~~~~~~~------~~~~~---~~~~~~~~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         160 TEACDWWSLGAILFELLTGKTLVECHPSGIN------THTTL---NIPEWVSEEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             CchhhHHHHHHHHHHHHHCcchhhcCchhcc------ccccc---CCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence            8899999999999999999988754221100      00001   12356788999999999999999999973

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.89  E-value=1.1e-23  Score=210.42  Aligned_cols=159  Identities=13%  Similarity=0.100  Sum_probs=105.8

Q ss_pred             hhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC-CeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        133 YLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       133 ~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      .++.  ||+  .||.|||++++ +||||||+|||++. ++.+||+|||+|+......  ........+++.|+|||.+..
T Consensus       259 ~i~~--qll--~aL~yLH~~gI-iHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~--~~~~~~~~~t~~Y~APE~~~~  331 (566)
T PLN03225        259 TIMR--QIL--FALDGLHSTGI-VHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGI--NYIPKEFLLDPRYAAPEQYIM  331 (566)
T ss_pred             HHHH--HHH--HHHHHHHHCCE-EeCcCCHHHEEEeCCCCcEEEEeCCCcccccccc--ccCCcccccCCCccChHHhhc
Confidence            4455  888  99999999999 99999999999986 5799999999997653221  122344578999999997643


Q ss_pred             CCCC------------------CCCCccchhHHHHHHHHHHHhCCCCCCCCCCC-----CCCC-------CCCCCCCCCC
Q psy16840        212 THAP------------------IRGTQKADVYAFAVILHEIIGRRGPFGGCGLY-----EPKG-------EDCEEPFRPN  261 (413)
Q Consensus       212 ~~~~------------------~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~-----~~~~-------~~~~~~~~~~  261 (413)
                      ....                  ..++.++|||||||++|||+++..|+......     ....       ........+.
T Consensus       332 ~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  411 (566)
T PLN03225        332 STQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPD  411 (566)
T ss_pred             cCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchh
Confidence            3211                  01245679999999999999877665321000     0000       0000000000


Q ss_pred             cc---cccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        262 LE---LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       262 ~~---~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ..   ...+.......+|+.+||+.||.+|||+.+++++-
T Consensus       412 ~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hp  451 (566)
T PLN03225        412 LRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHP  451 (566)
T ss_pred             hhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCc
Confidence            00   00112234566899999999999999999999864

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.89  E-value=3.2e-24  Score=198.28  Aligned_cols=148  Identities=20%  Similarity=0.306  Sum_probs=111.3

Q ss_pred             CCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      +++  .||.|||+ .++ +||||||+||+++.++.++|+|||++.......     .....|+..|+|||++.+...   
T Consensus       111 ~i~--~~l~~LH~~~~i-~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~---  179 (284)
T cd06620         111 AVV--EGLTYLYNVHRI-MHRDIKPSNILVNSRGQIKLCDFGVSGELINSI-----ADTFVGTSTYMSPERIQGGKY---  179 (284)
T ss_pred             HHH--HHHHHHHHhcCe-eccCCCHHHEEECCCCcEEEccCCcccchhhhc-----cCccccCcccCCHHHHccCCC---
Confidence            666  99999997 577 999999999999999999999999976542211     223468899999999877665   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC----------CCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG----------EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                       +.++|||||||++|++++|..||..........          ........+..+  ...++.++.+++.+||..||.+
T Consensus       180 -~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~  256 (284)
T cd06620         180 -TVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLP--SSDFPEDLRDFVDACLLKDPTE  256 (284)
T ss_pred             -CccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCC--chhcCHHHHHHHHHHhcCCccc
Confidence             889999999999999999999997643210000          000001111111  1237788999999999999999


Q ss_pred             CCChhHHHHHHHh
Q psy16840        288 RPDFPTIRARLKH  300 (413)
Q Consensus       288 Rps~~~i~~~l~~  300 (413)
                      |||+.++++...-
T Consensus       257 Rpt~~e~~~~~~~  269 (284)
T cd06620         257 RPTPQQLCAMPPF  269 (284)
T ss_pred             CcCHHHHhcCccc
Confidence            9999999876543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=7.4e-24  Score=192.13  Aligned_cols=150  Identities=19%  Similarity=0.375  Sum_probs=114.9

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||.|||+.|+ +||||+|+||+++.++.++|+|||++.........   .....++..|+|||.+.
T Consensus       101 ~~~~~~--~i~--~~l~~lH~~~i-~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~y~~pe~~~  172 (254)
T cd06627         101 VAVYVY--QVL--QGLAYLHEQGV-IHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD---DASVVGTPYWMAPEVIE  172 (254)
T ss_pred             HHHHHH--HHH--HHHHHHhhCCc-ccCCCCHHHEEECCCCCEEEeccccceecCCCccc---ccccccchhhcCHhhhc
Confidence            334444  777  99999999999 99999999999999999999999998765432211   23346788999999987


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +...    +.++||||+|+++|++++|..||.............. ...+   ..+..+++.+.+++.+||..+|++|||
T Consensus       173 ~~~~----~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~i~~~l~~~p~~R~~  244 (254)
T cd06627         173 MSGA----STASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ-DDHP---PLPEGISPELKDFLMQCFQKDPNLRPT  244 (254)
T ss_pred             CCCC----CcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc-cCCC---CCCCCCCHHHHHHHHHHHhCChhhCcC
Confidence            7665    8899999999999999999999975432111111111 1111   233567889999999999999999999


Q ss_pred             hhHHHH
Q psy16840        291 FPTIRA  296 (413)
Q Consensus       291 ~~~i~~  296 (413)
                      +.+++.
T Consensus       245 ~~~~l~  250 (254)
T cd06627         245 AKQLLK  250 (254)
T ss_pred             HHHHhc
Confidence            999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG0671|consensus

Probab=99.89  E-value=7e-25  Score=196.65  Aligned_cols=176  Identities=21%  Similarity=0.255  Sum_probs=125.1

Q ss_pred             hhhhhhhhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC----
Q psy16840         94 IASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS----  169 (413)
Q Consensus        94 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~----  169 (413)
                      ++.|..++.|||+...+...|             +..+..+.+  ||+  ++++|||+.++ +|-||||+|||+.+    
T Consensus       170 fellG~S~~dFlk~N~y~~fp-------------i~~ir~m~~--QL~--~sv~fLh~~kl-~HTDLKPENILfvss~~~  231 (415)
T KOG0671|consen  170 FELLGLSTFDFLKENNYIPFP-------------IDHIRHMGY--QLL--ESVAFLHDLKL-THTDLKPENILFVSSEYF  231 (415)
T ss_pred             EeccChhHHHHhccCCccccc-------------hHHHHHHHH--HHH--HHHHHHHhcce-eecCCChheEEEeccceE
Confidence            566777888888877655433             222333334  777  99999999999 99999999999842    


Q ss_pred             ----------------CeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHH
Q psy16840        170 ----------------RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHE  233 (413)
Q Consensus       170 ----------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~e  233 (413)
                                      +..+||+|||.|..-...      ....+.|..|.|||++.+-++    +..+||||+||||+|
T Consensus       232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~------hs~iVsTRHYRAPEViLgLGw----S~pCDvWSiGCIL~E  301 (415)
T KOG0671|consen  232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH------HSTIVSTRHYRAPEVILGLGW----SQPCDVWSIGCILVE  301 (415)
T ss_pred             EEeccCCccceeccCCCcceEEEecCCcceeccC------cceeeeccccCCchheeccCc----CCccCceeeeeEEEE
Confidence                            235899999998764322      245577999999999999998    999999999999999


Q ss_pred             HHhCCCCCCCCCCCCCC---CCCCC---------------------------------CCCCCCccc---c--cCCChHH
Q psy16840        234 IIGRRGPFGGCGLYEPK---GEDCE---------------------------------EPFRPNLEL---L--RDSCEPF  272 (413)
Q Consensus       234 l~~g~~pf~~~~~~~~~---~~~~~---------------------------------~~~~~~~~~---~--~~~~~~~  272 (413)
                      +.+|..-|+.....+..   +.+..                                 ...++..+.   .  .+.....
T Consensus       302 lytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~  381 (415)
T KOG0671|consen  302 LYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQ  381 (415)
T ss_pred             eeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhH
Confidence            99999988764422200   00000                                 000000000   0  0112346


Q ss_pred             HHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        273 VLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       273 l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.+|+++||..||.+|+|+.|++.+
T Consensus       382 LfDLl~~mL~fDP~~RiTl~EAL~H  406 (415)
T KOG0671|consen  382 LFDLLRRMLEFDPARRITLREALSH  406 (415)
T ss_pred             HHHHHHHHHccCccccccHHHHhcC
Confidence            8999999999999999999999765

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.89  E-value=2.8e-23  Score=196.67  Aligned_cols=161  Identities=16%  Similarity=0.210  Sum_probs=114.7

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccC-----------CCcccccccC
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN-----------DSIGEHQYYR  199 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~~~~~g  199 (413)
                      ...++.  |++  .||+|||++|+ +||||+|+||+++.++.+||+|||++........           .........+
T Consensus       121 ~~~~~~--ql~--~aL~~LH~~~i-~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (335)
T PTZ00024        121 VKCILL--QIL--NGLNVLHKWYF-MHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVV  195 (335)
T ss_pred             HHHHHH--HHH--HHHHHHHhCCe-ecccccHHHeEECCCCCEEECCccceeeccccccccccccccccccccccccccc
Confidence            344444  777  99999999999 9999999999999999999999999876541110           0111122345


Q ss_pred             cccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-----------------------CCC
Q psy16840        200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED-----------------------CEE  256 (413)
Q Consensus       200 t~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~-----------------------~~~  256 (413)
                      ++.|+|||.+.+...   ++.++|||||||++|+|++|..||.+.........+                       ...
T Consensus       196 ~~~y~aPE~~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (335)
T PTZ00024        196 TLWYRAPELLMGAEK---YHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTP  272 (335)
T ss_pred             ccCCCCChhcccCCC---CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCc
Confidence            788999999876432   288999999999999999999999764321100000                       000


Q ss_pred             CCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHH
Q psy16840        257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK  299 (413)
Q Consensus       257 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~  299 (413)
                      ...+.........+..+.+++.+||+.+|.+|||+++++....
T Consensus       273 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~  315 (335)
T PTZ00024        273 RKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEY  315 (335)
T ss_pred             CCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcc
Confidence            0011111122456788999999999999999999999987543

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.89  E-value=1e-23  Score=198.95  Aligned_cols=160  Identities=18%  Similarity=0.259  Sum_probs=109.1

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCc----ccccccCcccccCcc
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI----GEHQYYRSLLWKAPE  207 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~----~~~~~~gt~~y~aPE  207 (413)
                      ..++.  |++  .||+|||++++ +||||||+|||++.++.+|++||+.+...........    ......++..|+|||
T Consensus       104 ~~~~~--qi~--~aL~~lH~~~i-vHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  178 (328)
T cd08226         104 GNILF--GAL--RGLNYLHQNGY-IHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPE  178 (328)
T ss_pred             HHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChh
Confidence            34444  777  99999999999 9999999999999999999999986543221111100    011123456799999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-CCCC----------------------------
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC-EEPF----------------------------  258 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~-~~~~----------------------------  258 (413)
                      ++.+...  .++.++|||||||++|+|++|..||.+........... ....                            
T Consensus       179 ~~~~~~~--~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (328)
T cd08226         179 LLRQDLY--GYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGE  256 (328)
T ss_pred             hhcCCCC--CCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhccccc
Confidence            9976432  23889999999999999999999997543111000000 0000                            


Q ss_pred             ---C----------CCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        259 ---R----------PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       259 ---~----------~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                         .          .........+++.+.+|+.+||..||++|||+.++++..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~  309 (328)
T cd08226         257 SVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHA  309 (328)
T ss_pred             chhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCH
Confidence               0          000001134677899999999999999999999998653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.89  E-value=7.4e-24  Score=196.18  Aligned_cols=155  Identities=17%  Similarity=0.220  Sum_probs=113.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  +||.|||+.++ +||||+|+||+++.++.++|+|||+++.......  .......|+..|+|||.+.+...  ..
T Consensus       113 ql~--~~l~~lH~~~~-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~--~~  185 (288)
T cd05583         113 EIV--LALDHLHQLGI-IYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE--ERAYSFCGTIEYMAPEVIRGGSG--GH  185 (288)
T ss_pred             HHH--HHHHHHHHCCe-eccCCCHHHeEECCCCCEEEEECccccccccccc--cccccccCCccccCHHHhcCCCC--CC
Confidence            677  99999999999 9999999999999999999999999876432211  11223457889999999876541  12


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      +.++||||||+++|+|++|..||................. ......+..+++.+.+++.+||+.+|++|||+.++.+.|
T Consensus       186 ~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l  264 (288)
T cd05583         186 DKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRIL-KSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIK  264 (288)
T ss_pred             cchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHH-ccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHh
Confidence            7899999999999999999999964321111000000000 001112345788999999999999999999998887776


Q ss_pred             Hhh
Q psy16840        299 KHM  301 (413)
Q Consensus       299 ~~~  301 (413)
                      +..
T Consensus       265 ~~~  267 (288)
T cd05583         265 NHP  267 (288)
T ss_pred             cCc
Confidence            654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.89  E-value=2.5e-23  Score=196.19  Aligned_cols=151  Identities=17%  Similarity=0.321  Sum_probs=111.6

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ..++.  |++  .||+|||++++ +||||+|+||+++.++.+||+|||++.....      ......++..|+|||.+.+
T Consensus       111 ~~~~~--ql~--~aL~~LH~~~i-iH~dl~p~Nili~~~~~~~l~dfg~~~~~~~------~~~~~~~~~~y~aPE~~~~  179 (328)
T cd07856         111 QYFLY--QIL--RGLKYVHSAGV-VHRDLKPSNILINENCDLKICDFGLARIQDP------QMTGYVSTRYYRAPEIMLT  179 (328)
T ss_pred             HHHHH--HHH--HHHHHHHhCCc-ccCCCCHHHEeECCCCCEEeCccccccccCC------CcCCCcccccccCceeeec
Confidence            34444  777  99999999999 9999999999999999999999999865321      1123456888999998765


Q ss_pred             -CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC---------------CCC-----------CCCCCCCCCccc
Q psy16840        212 -THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEP---------------KGE-----------DCEEPFRPNLEL  264 (413)
Q Consensus       212 -~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~---------------~~~-----------~~~~~~~~~~~~  264 (413)
                       ..+    +.++||||||+++|++++|..||........               ...           ............
T Consensus       180 ~~~~----~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (328)
T cd07856         180 WQKY----DVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSE  255 (328)
T ss_pred             cCCc----CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHH
Confidence             334    8899999999999999999999965431000               000           000000111111


Q ss_pred             ccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        265 LRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ..+.+++.+.++|.+||+.+|++||++.+++..
T Consensus       256 ~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         256 KFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             HcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            224577899999999999999999999999765

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.88  E-value=2.4e-23  Score=189.72  Aligned_cols=151  Identities=20%  Similarity=0.298  Sum_probs=113.3

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  |++  .||.|||+.|+ +|+||+|+||+++. +.+||+|||++........   ......|++.|+|||.+
T Consensus       107 ~~~~~~~--~l~--~~l~~lH~~~i-~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~~pe~~  177 (260)
T cd08222         107 QVCEWFI--QLL--LGVHYMHQRRI-LHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCD---LATTFTGTPYYMSPEAL  177 (260)
T ss_pred             HHHHHHH--HHH--HHHHHHHHcCc-cccCCChhheEeec-CCEeecccCceeecCCCcc---cccCCCCCcCccCHHHH
Confidence            3344444  777  99999999999 99999999999986 4699999999876533211   12234578889999998


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .+..+    +.++|+||||+++|++++|..||............. ....+   ..+..++.++.++|.+||..+|++||
T Consensus       178 ~~~~~----~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp  249 (260)
T cd08222         178 KHQGY----DSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV-EGPTP---SLPETYSRQLNSIMQSMLNKDPSLRP  249 (260)
T ss_pred             ccCCC----CchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-cCCCC---CCcchhcHHHHHHHHHHhcCChhhCc
Confidence            77665    889999999999999999999996543221111111 11111   22356788999999999999999999


Q ss_pred             ChhHHHHH
Q psy16840        290 DFPTIRAR  297 (413)
Q Consensus       290 s~~~i~~~  297 (413)
                      ++.+++..
T Consensus       250 ~~~~il~~  257 (260)
T cd08222         250 SAAEILRN  257 (260)
T ss_pred             CHHHHhhC
Confidence            99998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.88  E-value=1.2e-23  Score=199.83  Aligned_cols=154  Identities=19%  Similarity=0.307  Sum_probs=112.1

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||+|||+.|+ +||||||+||+++.++.+||+|||++.....      ......++..|+|||.+.
T Consensus       122 ~~~i~~--qi~--~aL~~LH~~~i-vH~dlkp~NIll~~~~~~kl~dfg~~~~~~~------~~~~~~~~~~y~aPE~~~  190 (345)
T cd07877         122 VQFLIY--QIL--RGLKYIHSADI-IHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEIML  190 (345)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-eecCCChHHEEEcCCCCEEEecccccccccc------cccccccCCCccCHHHHh
Confidence            334444  777  99999999999 9999999999999999999999999875421      122346788999999886


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC---------------CC-----------CCCCCCCccc
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE---------------DC-----------EEPFRPNLEL  264 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~---------------~~-----------~~~~~~~~~~  264 (413)
                      +...   ++.++|||||||++|+|++|+.||...........               ..           ..........
T Consensus       191 ~~~~---~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (345)
T cd07877         191 NWMH---YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN  267 (345)
T ss_pred             CccC---CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhh
Confidence            6321   28899999999999999999999965432110000               00           0000000111


Q ss_pred             ccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        265 LRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      .....++.+.++|.+||..||.+||++.+++..-
T Consensus       268 ~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~  301 (345)
T cd07877         268 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA  301 (345)
T ss_pred             hcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence            1124678899999999999999999999998764

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.88  E-value=1.8e-23  Score=192.46  Aligned_cols=156  Identities=18%  Similarity=0.285  Sum_probs=116.2

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC----------------
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND----------------  190 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----------------  190 (413)
                      .+..+..++.  |++  .||.|||+.|+ +|+||+|+||+++.++.++|+|||++.........                
T Consensus       100 ~~~~~~~i~~--ql~--~~l~~Lh~~~~-~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (280)
T cd05581         100 DEKCTRFYAA--EIL--LALEYLHSKGI-IHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEK  174 (280)
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCe-eecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccc
Confidence            3334444555  777  99999999999 99999999999999999999999998765432211                


Q ss_pred             -CcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCC
Q psy16840        191 -SIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSC  269 (413)
Q Consensus       191 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (413)
                       ........++..|+|||.+.+...    +.++||||||+++|++++|..||..............     .....+...
T Consensus       175 ~~~~~~~~~~~~~~~~Pe~~~~~~~----~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~  245 (280)
T cd05581         175 NRRRFASFVGTAEYVSPELLNEKPA----GKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILK-----LEYSFPPNF  245 (280)
T ss_pred             cccccccccCCccccCHHHhCCCCC----ChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh-----cCCCCCCcc
Confidence             011223456889999999887665    8899999999999999999999976542111111110     111123566


Q ss_pred             hHHHHHHHHHHhccCCCCCCCh----hHHHH
Q psy16840        270 EPFVLACMRDCWAEAPESRPDF----PTIRA  296 (413)
Q Consensus       270 ~~~l~~li~~cl~~~P~~Rps~----~~i~~  296 (413)
                      ++.+.+++.+||+.+|.+||++    .+++.
T Consensus       246 ~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         246 PPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             CHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            8899999999999999999999    66654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.88  E-value=2.7e-23  Score=192.68  Aligned_cols=150  Identities=18%  Similarity=0.256  Sum_probs=108.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||+.|+ +||||+|+|||++.++.+||+|||++........  .......|+..|+|||.+.+...  .+
T Consensus       113 qi~--~al~~lH~~~i-~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~--~~  185 (290)
T cd05613         113 EIV--LALEHLHKLGI-IYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV--ERAYSFCGTIEYMAPDIVRGGDG--GH  185 (290)
T ss_pred             HHH--HHHHHHHhCCe-eccCCCHHHeEECCCCCEEEeeCccceecccccc--cccccccCCcccCChhhccCCCC--CC
Confidence            666  99999999999 9999999999999999999999999876532211  11234467889999999875432  12


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----ChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~  293 (413)
                      +.++||||||+++|++++|..||...+............ ....+..+..+++.+.+++.+||..+|.+||     ++.+
T Consensus       186 ~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~  264 (290)
T cd05613         186 DKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRI-LKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADE  264 (290)
T ss_pred             CccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHh-hccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHH
Confidence            788999999999999999999996432211111000000 0001112356788999999999999999997     5565


Q ss_pred             HHH
Q psy16840        294 IRA  296 (413)
Q Consensus       294 i~~  296 (413)
                      ++.
T Consensus       265 l~~  267 (290)
T cd05613         265 IKK  267 (290)
T ss_pred             HHc
Confidence            544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.88  E-value=3.8e-23  Score=187.16  Aligned_cols=146  Identities=17%  Similarity=0.202  Sum_probs=111.6

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||.|||+.++ +|+||+|+||+++.++.++|+|||++.......   .......++..|+|||...
T Consensus        95 ~~~~~~--qi~--~~l~~lh~~~~-~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~~Pe~~~  166 (250)
T cd05123          95 ARFYAA--EIV--LALEYLHSLGI-IYRDLKPENILLDADGHIKLTDFGLAKELSSEG---SRTNTFCGTPEYLAPEVLL  166 (250)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCc-eecCCCcceEEEcCCCcEEEeecCcceecccCC---CcccCCcCCccccChHHhC
Confidence            334444  777  99999999999 999999999999999999999999987653221   1123446788999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +...    +.++|+||||+++|++++|..||..............  ...   .++...+..+.+++.+||..||++||+
T Consensus       167 ~~~~----~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~---~~~~~~~~~l~~~i~~~l~~~p~~R~~  237 (250)
T cd05123         167 GKGY----GKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DPL---RFPEFLSPEARDLISGLLQKDPTKRLG  237 (250)
T ss_pred             CCCC----CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCC---CCCCCCCHHHHHHHHHHhcCCHhhCCC
Confidence            7765    8899999999999999999999965432111111111  111   133556889999999999999999999


Q ss_pred             hhH
Q psy16840        291 FPT  293 (413)
Q Consensus       291 ~~~  293 (413)
                      +.+
T Consensus       238 ~~~  240 (250)
T cd05123         238 SGG  240 (250)
T ss_pred             ccc
Confidence            943

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.88  E-value=2.2e-23  Score=197.96  Aligned_cols=153  Identities=22%  Similarity=0.338  Sum_probs=113.0

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||+|||+.|+ +||||||+||+++.++.+||+|||++......      .....+++.|+|||.+.
T Consensus       120 ~~~i~~--qi~--~al~~LH~~gi-~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~  188 (343)
T cd07880         120 IQFLVY--QML--KGLKYIHAAGI-IHRDLKPGNLAVNEDCELKILDFGLARQTDSE------MTGYVVTRWYRAPEVIL  188 (343)
T ss_pred             HHHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEeecccccccccC------ccccccCCcccCHHHHh
Confidence            334444  777  99999999999 99999999999999999999999998754321      22345688999999987


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC--------------------------CCCCCCCCccc
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED--------------------------CEEPFRPNLEL  264 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~--------------------------~~~~~~~~~~~  264 (413)
                      +...   ++.++|+||||+++|++++|..||.+..........                          .....+.....
T Consensus       189 ~~~~---~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (343)
T cd07880         189 NWMH---YTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRS  265 (343)
T ss_pred             CCCC---CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHH
Confidence            5321   288999999999999999999999754321100000                          00000111112


Q ss_pred             ccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        265 LRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ....+++.+.+++.+|++.||.+|||+.+++..
T Consensus       266 ~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~  298 (343)
T cd07880         266 LLPNANPLAVNVLEKMLVLDAESRITAAEALAH  298 (343)
T ss_pred             hccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            234678889999999999999999999999843

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0664|consensus

Probab=99.87  E-value=2.1e-23  Score=179.26  Aligned_cols=158  Identities=20%  Similarity=0.297  Sum_probs=116.0

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..|++  ||+  +||.|||+.+| .||||||.|.|+++|..+||||||+++....+....  -+..+-|..|.|||++.
T Consensus       158 vKVFlY--QIL--RGLKYLHsA~I-LHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~h--MTqEVVTQYYRAPEiLM  230 (449)
T KOG0664|consen  158 VKVFVY--QIL--RGLKYLHTANI-LHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLN--MTHEVVTQYYRAPELLM  230 (449)
T ss_pred             hhhhHH--HHH--hhhHHHhhcch-hhccCCCccEEeccCceEEecccccccccchhhhhh--hHHHHHHHHhccHHHhh
Confidence            345556  888  99999999999 999999999999999999999999998765443322  22234578899999999


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC-----------------------CCC-CCCCCCccc--
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE-----------------------DCE-EPFRPNLEL--  264 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~-----------------------~~~-~~~~~~~~~--  264 (413)
                      +...   |+.+.||||.|||+.|++.++.-|...+..+....                       +.. ....|..+.  
T Consensus       231 GaRh---Ys~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLY  307 (449)
T KOG0664|consen  231 GARR---YTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLY  307 (449)
T ss_pred             cchh---hcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCcccee
Confidence            8764   59999999999999999998888876553332211                       111 111222221  


Q ss_pred             -cc--CCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        265 -LR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       265 -~~--~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                       +.  .....+...+..+++..||+.|.+..+.+..+
T Consensus       308 tlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~  344 (449)
T KOG0664|consen  308 KIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR  344 (449)
T ss_pred             eecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence             11  23345677888899999999999988887654

>KOG4236|consensus

Probab=99.87  E-value=4e-24  Score=198.50  Aligned_cols=147  Identities=17%  Similarity=0.215  Sum_probs=117.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCC---eEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAP  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  215 (413)
                      ||+  .||.|||-++| +|+||||+|||+.+.   -++||||||+|+.+.....    ..+.+||+.|+|||++++..+ 
T Consensus       672 QIL--~ALr~LH~knI-vHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF----RrsVVGTPAYLaPEVLrnkGy-  743 (888)
T KOG4236|consen  672 QIL--VALRYLHFKNI-VHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF----RRSVVGTPAYLAPEVLRNKGY-  743 (888)
T ss_pred             HHH--HHHHHhhhcce-eeccCCchheeeccCCCCCceeeccccceeecchhhh----hhhhcCCccccCHHHHhhccc-
Confidence            777  89999999999 999999999999765   5899999999999864432    456789999999999999988 


Q ss_pred             CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        216 IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                         ...-|+||.|+|+|--++|..||..............-.+.|..   ...+++...+||..+|+..-.+|-|.+..+
T Consensus       744 ---NrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~P---W~eis~~AidlIn~LLqVkm~kRysvdk~l  817 (888)
T KOG4236|consen  744 ---NRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNP---WSEISPEAIDLINNLLQVKMRKRYSVDKSL  817 (888)
T ss_pred             ---cccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCc---hhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence               88999999999999999999999764322111111112222221   256889999999999999999999988876


Q ss_pred             HHHH
Q psy16840        296 ARLK  299 (413)
Q Consensus       296 ~~l~  299 (413)
                      .+.+
T Consensus       818 sh~W  821 (888)
T KOG4236|consen  818 SHPW  821 (888)
T ss_pred             cchh
Confidence            6543

>KOG0665|consensus

Probab=99.87  E-value=1.4e-22  Score=177.94  Aligned_cols=158  Identities=23%  Similarity=0.293  Sum_probs=117.7

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +|--.+..++.  |.+  .|++|||+.|| +||||||+||++..+..+||.|||+|+.....    ...+.++.|..|.|
T Consensus       115 lDH~tis~i~y--q~~--~~ik~lhs~~I-ihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~----~~mtpyVvtRyyra  185 (369)
T KOG0665|consen  115 LDHETISYILY--QML--CGIKHLHSAGI-IHRDLKPSNIVVNSDCTLKILDFGLARTEDTD----FMMTPYVVTRYYRA  185 (369)
T ss_pred             cchHHHHHHHH--HHH--HHHHHHHhcce-eecccCcccceecchhheeeccchhhcccCcc----cccCchhheeeccC
Confidence            34334445555  777  89999999999 99999999999999999999999998754322    23456678999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCC-----------------------------
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEE-----------------------------  256 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~-----------------------------  256 (413)
                      ||++.+-.+    ...+||||+||++.||++|..-|.+....+....+...                             
T Consensus       186 pevil~~~~----ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~  261 (369)
T KOG0665|consen  186 PEVILGMGY----KENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAI  261 (369)
T ss_pred             chheeccCC----cccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhcc
Confidence            999998876    89999999999999999999988765422211110000                             


Q ss_pred             ---------CCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        257 ---------PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       257 ---------~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                               .+++... .+..-+..+++++.+||..||++|.|+++++.+
T Consensus       262 ~f~~~fpD~~f~~~~e-~~~~~~~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  262 SFSELFPDSLFPVVLE-GSKLDCSLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             chhhhCCccccccccc-CCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence                     0000000 011234568999999999999999999999875

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.86  E-value=2.6e-22  Score=180.21  Aligned_cols=152  Identities=20%  Similarity=0.260  Sum_probs=113.1

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  +++  .|+.|||+.++ +|+||+|+||+++.++.++|+|||.+.......    ......++..|+|||.+.
T Consensus        89 ~~~~~~--~l~--~~l~~lh~~~i-~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----~~~~~~~~~~~~~pE~~~  159 (244)
T smart00220       89 ARFYAR--QIL--SALEYLHSNGI-IHRDLKPENILLDEDGHVKLADFGLARQLDPGG----LLTTFVGTPEYMAPEVLL  159 (244)
T ss_pred             HHHHHH--HHH--HHHHHHHHcCe-ecCCcCHHHeEECCCCcEEEccccceeeecccc----ccccccCCcCCCCHHHHc
Confidence            334444  677  99999999999 999999999999999999999999987754322    123345788899999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +...    +.++||||||+++|++++|..||.................... ......++.++.+++.+||..+|++||+
T Consensus       160 ~~~~----~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~Rp~  234 (244)
T smart00220      160 GKGY----GKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF-PPPEWKISPEAKDLIRKLLVKDPEKRLT  234 (244)
T ss_pred             cCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC-ccccccCCHHHHHHHHHHccCCchhccC
Confidence            6665    8899999999999999999999965221111111111111111 1001127789999999999999999999


Q ss_pred             hhHHHH
Q psy16840        291 FPTIRA  296 (413)
Q Consensus       291 ~~~i~~  296 (413)
                      +.++++
T Consensus       235 ~~~~~~  240 (244)
T smart00220      235 AEEALQ  240 (244)
T ss_pred             HHHHhh
Confidence            999976

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.86  E-value=5.8e-22  Score=212.89  Aligned_cols=161  Identities=18%  Similarity=0.224  Sum_probs=111.8

Q ss_pred             hhhHhhhccccCCchHHhhHhhh---cCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLH---RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH---~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      +..+..++.  |++  .||+|||   +.++ +||||||+||+++.++..++. ||.+.....       .....+++.|+
T Consensus       779 ~~~~~~i~~--~ia--~~L~yLH~~~~~~i-iH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-------~~~~~~t~~y~  845 (968)
T PLN00113        779 WERRRKIAI--GIA--KALRFLHCRCSPAV-VVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-------DTKCFISSAYV  845 (968)
T ss_pred             HHHHHHHHH--HHH--HHHHHhccCCCCCe-ecCCCCHHhEEECCCCceEEE-ecccccccc-------CCCcccccccc
Confidence            333344444  666  9999999   5688 999999999999998887775 665433211       12236789999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC----------CCCCCCCCCCcc---cccCCChH
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG----------EDCEEPFRPNLE---LLRDSCEP  271 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~----------~~~~~~~~~~~~---~~~~~~~~  271 (413)
                      |||++.+..+    +.++|||||||++|||++|+.||..........          .......+|...   ........
T Consensus       846 aPE~~~~~~~----~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  921 (968)
T PLN00113        846 APETRETKDI----TEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIV  921 (968)
T ss_pred             CcccccCCCC----CcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHH
Confidence            9999988766    999999999999999999999985322110000          000001111111   01112334


Q ss_pred             HHHHHHHHHhccCCCCCCChhHHHHHHHhhcccC
Q psy16840        272 FVLACMRDCWAEAPESRPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       272 ~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~~~  305 (413)
                      ++.+++.+||+.||++|||+.++++.|+.+....
T Consensus       922 ~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~  955 (968)
T PLN00113        922 EVMNLALHCTATDPTARPCANDVLKTLESASRSS  955 (968)
T ss_pred             HHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence            6788999999999999999999999999876543

>KOG0587|consensus

Probab=99.86  E-value=8.7e-22  Score=193.22  Aligned_cols=165  Identities=16%  Similarity=0.276  Sum_probs=130.7

Q ss_pred             cccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCccc
Q psy16840        123 GIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL  202 (413)
Q Consensus       123 ~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~  202 (413)
                      .-.+++..+..+++  .++  .||.+||.+.+ +|||+|-.|||++.++.|||+|||++..+...   .....+..||+.
T Consensus       117 g~rl~E~~IaYI~r--e~l--rgl~HLH~nkv-iHRDikG~NiLLT~e~~VKLvDFGvSaQldsT---~grRnT~iGtP~  188 (953)
T KOG0587|consen  117 GNRLKEEWIAYILR--EIL--RGLAHLHNNKV-IHRDIKGQNVLLTENAEVKLVDFGVSAQLDST---VGRRNTFIGTPY  188 (953)
T ss_pred             ccchhhHHHHHHHH--HHH--HHHHHHhhcce-eeecccCceEEEeccCcEEEeeeeeeeeeecc---cccccCcCCCcc
Confidence            34566777777888  888  99999999999 99999999999999999999999998766432   233567789999


Q ss_pred             ccCcccccCCC-CCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHh
Q psy16840        203 WKAPELLRDTH-APIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCW  281 (413)
Q Consensus       203 y~aPE~~~~~~-~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (413)
                      |||||++.... ....|+..+|+||||++..||.-|.+|+.+.........+...+ +|.+ .-+...+.++.++|..||
T Consensus       189 WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNP-PPkL-krp~kWs~~FndFIs~cL  266 (953)
T KOG0587|consen  189 WMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP-PPKL-KRPKKWSKKFNDFISTCL  266 (953)
T ss_pred             cccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCC-Cccc-cchhhHHHHHHHHHHHHH
Confidence            99999986543 33456899999999999999999999998765444433333222 1221 124678899999999999


Q ss_pred             ccCCCCCCChhHHHHH
Q psy16840        282 AEAPESRPDFPTIRAR  297 (413)
Q Consensus       282 ~~~P~~Rps~~~i~~~  297 (413)
                      .+|.++||+..+++.+
T Consensus       267 ~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  267 VKDYEQRPSTEELLKH  282 (953)
T ss_pred             hhccccCcchhhhccC
Confidence            9999999999988765

>KOG4250|consensus

Probab=99.86  E-value=5.4e-22  Score=190.97  Aligned_cols=155  Identities=20%  Similarity=0.211  Sum_probs=107.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEc----CCeEEEEeccccccccccccCCCcccccccCcccccCcccccC-CC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVT----SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD-TH  213 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~----~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~  213 (413)
                      |+.  .||.|||++|| +||||||.||++-    +....||+|||.|+....+.    ...+.+||+.|++||++.. ..
T Consensus       128 d~~--~al~~LrEn~I-vHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s----~~~S~vGT~~YLhPel~E~q~~  200 (732)
T KOG4250|consen  128 DLV--SALRHLRENGI-VHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS----LFTSLVGTEEYLHPELYERQKK  200 (732)
T ss_pred             HHH--HHHHHHHHcCc-eeccCCCCcEEEeecCCCceEEeeecccccccCCCCC----eeeeecCchhhcChHHHhhccC
Confidence            666  99999999999 9999999999984    33468999999999875433    3567899999999999985 55


Q ss_pred             CCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC----CCCCCCCC---------------CC--CCCccc---ccCCC
Q psy16840        214 APIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE----PKGEDCEE---------------PF--RPNLEL---LRDSC  269 (413)
Q Consensus       214 ~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~----~~~~~~~~---------------~~--~~~~~~---~~~~~  269 (413)
                      +    +..+|.|||||++|+++||..||.......    ....+...               +.  ...++.   +....
T Consensus       201 y----~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l  276 (732)
T KOG4250|consen  201 Y----TATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGL  276 (732)
T ss_pred             c----CceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHH
Confidence            5    999999999999999999999985432111    11100000               00  000110   01111


Q ss_pred             hHHHHHHHHHHhccCCCCCC--ChhHHHHHHHhhccc
Q psy16840        270 EPFVLACMRDCWAEAPESRP--DFPTIRARLKHMKDG  304 (413)
Q Consensus       270 ~~~l~~li~~cl~~~P~~Rp--s~~~i~~~l~~~~~~  304 (413)
                      -..+...+..+|..+|.+|-  .+.+....+..+...
T Consensus       277 ~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~  313 (732)
T KOG4250|consen  277 ATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL  313 (732)
T ss_pred             HhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence            22345556677888999998  777777666665443

>KOG0662|consensus

Probab=99.85  E-value=2.6e-22  Score=162.44  Aligned_cols=163  Identities=17%  Similarity=0.211  Sum_probs=119.1

Q ss_pred             ccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccc
Q psy16840        124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       124 i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      -.+|.....++|.  |++  +||.|+|++++ .||||||+|.|++.+|.+|++|||+++.....-.   .....+-|.+|
T Consensus        96 g~~d~~~~rsfml--qll--rgl~fchshnv-lhrdlkpqnllin~ngelkladfglarafgipvr---cysaevvtlwy  167 (292)
T KOG0662|consen   96 GDLDPEIVRSFML--QLL--RGLGFCHSHNV-LHRDLKPQNLLINRNGELKLADFGLARAFGIPVR---CYSAEVVTLWY  167 (292)
T ss_pred             CcCCHHHHHHHHH--HHH--hhhhhhhhhhh-hhccCCcceEEeccCCcEEecccchhhhcCCceE---eeeceeeeeec
Confidence            3456667778888  999  99999999999 9999999999999999999999999987643211   11223558999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCC---------------C------CCCCCC
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDC---------------E------EPFRPN  261 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~---------------~------~~~~~~  261 (413)
                      .+|.++.+...   |+...|+||.|||+.|+.. |++-|++....+....+.               .      .+.-|.
T Consensus       168 rppdvlfgakl---y~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypa  244 (292)
T KOG0662|consen  168 RPPDVLFGAKL---YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPA  244 (292)
T ss_pred             cCcceeeeeeh---hccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccc
Confidence            99999988765   4899999999999999986 666677654222111100               0      000000


Q ss_pred             ---cccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        262 ---LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       262 ---~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                         ...+-+..+..-++++++.+.-+|..|.+++..++.
T Consensus       245 ttswsqivp~lns~grdllqkll~cnp~qrisaeaalqh  283 (292)
T KOG0662|consen  245 TTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH  283 (292)
T ss_pred             cchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence               011123445567899999999999999999987653

>KOG0608|consensus

Probab=99.85  E-value=1.1e-21  Score=185.87  Aligned_cols=142  Identities=20%  Similarity=0.206  Sum_probs=105.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC----------------------------
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND----------------------------  190 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----------------------------  190 (413)
                      ++.  .|+++.|+.|+ |||||||+|||||.+|++||+||||+.-+.+....                            
T Consensus       737 Elt--cAiesVHkmGF-IHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lk  813 (1034)
T KOG0608|consen  737 ELT--CAIESVHKMGF-IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLK  813 (1034)
T ss_pred             HHH--HHHHHHHhccc-eecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccch
Confidence            555  79999999999 99999999999999999999999997532211000                            


Q ss_pred             -----------CcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCC
Q psy16840        191 -----------SIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR  259 (413)
Q Consensus       191 -----------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  259 (413)
                                 ....+..+||+.|+|||++....+    +..+|.||.|||||||+.|++||......+....+......
T Consensus       814 vL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~----~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~  889 (1034)
T KOG0608|consen  814 VLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGY----TQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNF  889 (1034)
T ss_pred             HHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCc----cccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhc
Confidence                       011234589999999999998887    99999999999999999999999887766655544332211


Q ss_pred             CCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        260 PNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       260 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      ..++ ...+++++..++|.++.. +++.|.
T Consensus       890 l~~~-~~~~ls~e~~~li~kLc~-sad~RL  917 (1034)
T KOG0608|consen  890 LHIP-YQGNLSKEALDLIQKLCC-SADSRL  917 (1034)
T ss_pred             cccc-cccccCHHHHHHHHHHhc-Chhhhh
Confidence            1111 125678899998876543 566664

>KOG0695|consensus

Probab=99.85  E-value=4.4e-22  Score=175.70  Aligned_cols=138  Identities=21%  Similarity=0.319  Sum_probs=109.0

Q ss_pred             cCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        138 GDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       138 ~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      ++|+  -||.|||++|| |.||||..|+|+|..|++||+|+|+++.--.   ....+.+.+|||.|.|||++++..+   
T Consensus       358 ~ei~--lal~flh~rgi-iyrdlkldnvlldaeghikltdygmcke~l~---~gd~tstfcgtpnyiapeilrgeey---  428 (593)
T KOG0695|consen  358 AEIC--LALNFLHERGI-IYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG---PGDTTSTFCGTPNYIAPEILRGEEY---  428 (593)
T ss_pred             HHHH--HHHHHHhhcCe-eeeeccccceEEccCCceeecccchhhcCCC---CCcccccccCCCcccchhhhccccc---
Confidence            3677  89999999999 9999999999999999999999999875322   1222457899999999999999998   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--------CCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--------EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                       +..+|.|+||++++||+.|+.||.-........        .+.....+     +|...+-....+++..|++||.+|.
T Consensus       429 -gfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir-----iprslsvkas~vlkgflnkdp~erl  502 (593)
T KOG0695|consen  429 -GFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR-----IPRSLSVKASHVLKGFLNKDPKERL  502 (593)
T ss_pred             -CceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc-----ccceeehhhHHHHHHhhcCCcHHhc
Confidence             999999999999999999999996443222211        12222222     2345666788899999999999995


Q ss_pred             C
Q psy16840        290 D  290 (413)
Q Consensus       290 s  290 (413)
                      .
T Consensus       503 g  503 (593)
T KOG0695|consen  503 G  503 (593)
T ss_pred             C
Confidence            4

>KOG1151|consensus

Probab=99.85  E-value=5.2e-22  Score=181.10  Aligned_cols=151  Identities=23%  Similarity=0.311  Sum_probs=113.8

Q ss_pred             CCchHHhhHhhhc-CCCcccCCCCCCCeEEcC---CeEEEEeccccccccccccCCCc----ccccccCcccccCccccc
Q psy16840        139 DGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTS---RWVLQVTDFGLHELRHCAENDSI----GEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       139 ~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~----~~~~~~gt~~y~aPE~~~  210 (413)
                      ||+  .||.||.+ +..|||-||||.|||+-+   .|.+||+|||+++.+..+.....    .+....||.+|++||++.
T Consensus       576 QiV--nAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFv  653 (775)
T KOG1151|consen  576 QIV--NALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFV  653 (775)
T ss_pred             HHH--HHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceee
Confidence            666  99999995 344499999999999954   37899999999999876544322    133567899999999987


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC------CCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG------EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      -...+...+.++||||.|||+|.+++|+.||+.........      ......+ |..    +.++++..++|++||+.-
T Consensus       654 VgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqF-P~K----PvVsseAkaFIRRCLaYR  728 (775)
T KOG1151|consen  654 VGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQF-PPK----PVVSSEAKAFIRRCLAYR  728 (775)
T ss_pred             cCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccC-CCC----CccCHHHHHHHHHHHHhh
Confidence            66555667999999999999999999999998643221111      1111111 111    457889999999999999


Q ss_pred             CCCCCChhHHHH
Q psy16840        285 PESRPDFPTIRA  296 (413)
Q Consensus       285 P~~Rps~~~i~~  296 (413)
                      -++|.+..++..
T Consensus       729 KeDR~DV~qLA~  740 (775)
T KOG1151|consen  729 KEDRIDVQQLAC  740 (775)
T ss_pred             hhhhhhHHHHcc
Confidence            999988877653

>KOG0607|consensus

Probab=99.85  E-value=5.8e-22  Score=173.92  Aligned_cols=156  Identities=17%  Similarity=0.118  Sum_probs=111.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCC---eEEEEeccccccccccc----cCCCcccccccCcccccCcccccC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCA----ENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~---~~~kl~Dfg~a~~~~~~----~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ||+  .||.|||.+|| .||||||+|||..+.   .-+|||||.+..-....    ........+.+|+..|||||+..-
T Consensus       184 dia--~aLdFlH~kgI-AHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~  260 (463)
T KOG0607|consen  184 DIA--SALDFLHTKGI-AHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDV  260 (463)
T ss_pred             HHH--HHHHHHhhcCc-ccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhh
Confidence            666  99999999999 999999999999754   35899999987543221    112223446688999999998642


Q ss_pred             CC-CCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---------------CCCCCCCCCCcccccCCChHHHHH
Q psy16840        212 TH-APIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------------EDCEEPFRPNLELLRDSCEPFVLA  275 (413)
Q Consensus       212 ~~-~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~l~~  275 (413)
                      -. ....|+.+.|.||||+|+|-|++|.+||.+.-..+--.               .+....+..+-. ....++.+.++
T Consensus       261 fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdk-dWahIS~eakd  339 (463)
T KOG0607|consen  261 FVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDK-DWAHISSEAKD  339 (463)
T ss_pred             hccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChh-hhHHhhHHHHH
Confidence            11 11235899999999999999999999997643221111               111111111111 12458899999


Q ss_pred             HHHHHhccCCCCCCChhHHHHHH
Q psy16840        276 CMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       276 li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ++..++..||.+|-++.++++..
T Consensus       340 lisnLlvrda~~rlsa~~vlnhP  362 (463)
T KOG0607|consen  340 LISNLLVRDAKQRLSAAQVLNHP  362 (463)
T ss_pred             HHHHHHhccHHhhhhhhhccCCc
Confidence            99999999999999999998743

>KOG0670|consensus

Probab=99.83  E-value=6.1e-22  Score=183.83  Aligned_cols=108  Identities=19%  Similarity=0.306  Sum_probs=87.6

Q ss_pred             ccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-eEEEEeccccccccccccCCCcccccccCccc
Q psy16840        124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSLL  202 (413)
Q Consensus       124 i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~  202 (413)
                      +-+.+..+.++.+  |+.  -||..|-..|+ +|.||||.||||++. ..+||||||.|.....+..     +.+.-+..
T Consensus       531 vGL~ikaVRsYaq--QLf--lALklLK~c~v-lHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei-----tPYLVSRF  600 (752)
T KOG0670|consen  531 VGLHIKAVRSYAQ--QLF--LALKLLKKCGV-LHADIKPDNILVNESKNILKLCDFGSASFASENEI-----TPYLVSRF  600 (752)
T ss_pred             cceeehHHHHHHH--HHH--HHHHHHHhcCe-eecccCccceEeccCcceeeeccCccccccccccc-----cHHHHHHh
Confidence            3344444445555  777  89999999999 999999999999865 6899999999987654332     23344677


Q ss_pred             ccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q psy16840        203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG  245 (413)
Q Consensus       203 y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~  245 (413)
                      |.|||++.+..|    +...|+||.||+|||+.||+.-|++.+
T Consensus       601 YRaPEIiLG~~y----d~~iD~WSvgctLYElYtGkIlFpG~T  639 (752)
T KOG0670|consen  601 YRAPEIILGLPY----DYPIDTWSVGCTLYELYTGKILFPGRT  639 (752)
T ss_pred             ccCcceeecCcc----cCCccceeeceeeEEeeccceecCCCC
Confidence            999999999988    889999999999999999999988765

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.83  E-value=2.5e-21  Score=198.32  Aligned_cols=95  Identities=15%  Similarity=0.107  Sum_probs=71.5

Q ss_pred             cCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHH
Q psy16840        198 YRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACM  277 (413)
Q Consensus       198 ~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (413)
                      .||+.|+|||++.+..+    +.++|||||||++|||++|..||.+.........+......  .+.....++..+.+++
T Consensus       541 vGT~~Y~APE~l~~~~~----~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~--~p~~~~~~~~~~~~~l  614 (669)
T cd05610         541 LGTPDYLAPELLLGKPH----GPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIP--WPEGEEKLSVNAQNAI  614 (669)
T ss_pred             eeCccccCHHHcCCCCC----CcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCC--CCcccccCCHHHHHHH
Confidence            46889999999988776    89999999999999999999999765422222111111111  1111235778899999


Q ss_pred             HHHhccCCCCCCChhHHHHHH
Q psy16840        278 RDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       278 ~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ..||..||.+||++.+++.+.
T Consensus       615 ~~lL~~dP~~R~ta~e~l~h~  635 (669)
T cd05610         615 EILLTMDPTKRAGLKELKQHP  635 (669)
T ss_pred             HHHcccChhHCcCHHHHHhCH
Confidence            999999999999999998764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.83  E-value=1.2e-20  Score=184.46  Aligned_cols=165  Identities=18%  Similarity=0.148  Sum_probs=112.0

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      .++..+..++.  |++  .||.|||++++ +||||||+|||++.++.+||+|||++.......  ........+++.|+|
T Consensus       306 ~~~~~~~~i~~--ql~--~aL~~lH~~~i-vHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~--~~~~~~g~~tp~Y~a  378 (507)
T PLN03224        306 RDINVIKGVMR--QVL--TGLRKLHRIGI-VHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI--NFNPLYGMLDPRYSP  378 (507)
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCe-ecCCCchHhEEECCCCcEEEEeCcCccccccCC--ccCccccCCCcceeC
Confidence            34555556666  888  99999999999 999999999999999999999999986543221  111122344789999


Q ss_pred             cccccCCCCCC------------------CCCccchhHHHHHHHHHHHhCCC-CCCCCCCCCCCCCC---------CCCC
Q psy16840        206 PELLRDTHAPI------------------RGTQKADVYAFAVILHEIIGRRG-PFGGCGLYEPKGED---------CEEP  257 (413)
Q Consensus       206 PE~~~~~~~~~------------------~~~~~~Dv~slG~il~el~~g~~-pf~~~~~~~~~~~~---------~~~~  257 (413)
                      ||.+.......                  ....+.||||+||++|+|++|.. ||.+..........         ....
T Consensus       379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~  458 (507)
T PLN03224        379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG  458 (507)
T ss_pred             hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc
Confidence            99886432100                  11235799999999999999875 66543211111000         0000


Q ss_pred             CCCCcccccCCChHHHHHHHHHHhccCC---CCCCChhHHHHHH
Q psy16840        258 FRPNLELLRDSCEPFVLACMRDCWAEAP---ESRPDFPTIRARL  298 (413)
Q Consensus       258 ~~~~~~~~~~~~~~~l~~li~~cl~~~P---~~Rps~~~i~~~l  298 (413)
                      .....+ ..+..++..++|+.++|..+|   .+|+|+++++++-
T Consensus       459 ~~~~~~-~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp  501 (507)
T PLN03224        459 QKYDFS-LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHR  501 (507)
T ss_pred             cCCCcc-cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCC
Confidence            111111 124578899999999999866   6899999998753

>KOG0668|consensus

Probab=99.80  E-value=8.6e-20  Score=153.33  Aligned_cols=149  Identities=19%  Similarity=0.261  Sum_probs=108.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-eEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      +++  .||.|||++|| +|||+||.|+++|.. -.++|+|+|+|.+++....-    +..+.+..|--||.+-.-..   
T Consensus       140 elL--kALdyCHS~GI-mHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eY----nVRVASRyfKGPELLVdy~~---  209 (338)
T KOG0668|consen  140 ELL--KALDYCHSMGI-MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLVDYQM---  209 (338)
T ss_pred             HHH--HHHhHHHhcCc-ccccCCcceeeechhhceeeeeecchHhhcCCCcee----eeeeehhhcCCchheeechh---
Confidence            777  99999999999 999999999999965 57999999999998754322    22244567889999876553   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCC-CCCCCCC---------------------------CCCCCCCCCCcccc----
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGC-GLYEPKG---------------------------EDCEEPFRPNLELL----  265 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~-~~~~~~~---------------------------~~~~~~~~~~~~~~----  265 (413)
                      |+..-|+|||||++..|+..+.||... +..++..                           .+.....+.....+    
T Consensus       210 YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~  289 (338)
T KOG0668|consen  210 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSE  289 (338)
T ss_pred             ccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCcc
Confidence            388899999999999999999997432 2111110                           01111111111111    


Q ss_pred             -cCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        266 -RDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       266 -~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                       ..-.++++.+++.+.|..|-.+|+|++|.+.+
T Consensus       290 n~hl~~peaiDlldklLrYDHqeRlTakEam~H  322 (338)
T KOG0668|consen  290 NQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH  322 (338)
T ss_pred             ccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence             12256899999999999999999999998764

>KOG1345|consensus

Probab=99.76  E-value=2.4e-19  Score=154.32  Aligned_cols=147  Identities=16%  Similarity=0.227  Sum_probs=102.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcC--CeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCC-C
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS--RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA-P  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~  215 (413)
                      |++  +|+.|+|++++ ||||||.+||||-.  ..++||||||+....+..      ....-.+..|.+||....... .
T Consensus       129 ql~--SAi~fMHsknl-VHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t------V~~~~~~~~y~~pe~~~~~~ne~  199 (378)
T KOG1345|consen  129 QLL--SAIEFMHSKNL-VHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT------VKYLEYVNNYHAPELCDTVVNEK  199 (378)
T ss_pred             HHH--HHHHHhhccch-hhcccccceEEEecCCccEEEeeecccccccCce------ehhhhhhcccCCcHHHhhccccc
Confidence            777  99999999999 99999999999942  358999999997543211      111122456889987654321 0


Q ss_pred             CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh
Q psy16840        216 IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP  292 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~  292 (413)
                      ....+.+|||.||+++|.++||..||+.....+...   ........+..+..-..+++.+..+.++-+..+|++|--..
T Consensus       200 ~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~  279 (378)
T KOG1345|consen  200 LVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIW  279 (378)
T ss_pred             eEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhH
Confidence            123678999999999999999999998655443322   11112222333333356788899999999999999994443


Q ss_pred             HH
Q psy16840        293 TI  294 (413)
Q Consensus       293 ~i  294 (413)
                      +.
T Consensus       280 ~~  281 (378)
T KOG1345|consen  280 TA  281 (378)
T ss_pred             HH
Confidence            33

>KOG4171|consensus

Probab=99.75  E-value=9.9e-19  Score=168.80  Aligned_cols=73  Identities=49%  Similarity=0.767  Sum_probs=69.6

Q ss_pred             CCcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcceeEEEEEeccccccccc
Q psy16840          1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGATEGAVQG   73 (413)
Q Consensus         1 ~p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~~~~~~l~~~~~~~~~~   73 (413)
                      |||||+||||||+||||||+|.|++|++|+.||..|.+.+.|.+++||.+.+||+|.+.+|||........+.
T Consensus       555 mPRYCLFGdTVn~AsrmES~s~p~KI~vS~~T~~~l~~~~~f~f~pRg~v~vk~kg~m~tyFL~~~~~~~~~~  627 (671)
T KOG4171|consen  555 MPRYCLFGDTVNLASRMESSSVPGKINVSPTTYRKLKKQGSFEFEPRGRVEVKGKGPMETYFLERSLGPSIWE  627 (671)
T ss_pred             ccceeecCCchhhhhhhhcCCCCceEEeCHHHHHHHHhCCCceeeecCccccCCCCceEEEEEEecCCCCCCc
Confidence            8999999999999999999999999999999999999999999999999999999999999999888877444

>KOG0576|consensus

Probab=99.75  E-value=7.2e-19  Score=168.07  Aligned_cols=155  Identities=17%  Similarity=0.276  Sum_probs=119.8

Q ss_pred             hhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCC
Q psy16840        133 YLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDT  212 (413)
Q Consensus       133 ~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  212 (413)
                      ..++  +.+  +||+|||++|- +|||||-.|||+++.|.+|++|||.+..+...   .....+..||+.|||||+..-.
T Consensus       116 yvcR--etl--~gl~ylhs~gk-~hRdiKGanilltd~gDvklaDfgvsaqitat---i~KrksfiGtpywmapEvaave  187 (829)
T KOG0576|consen  116 YVCR--ETL--QGLKYLHSQGK-IHRDIKGANILLTDEGDVKLADFGVSAQITAT---IAKRKSFIGTPYWMAPEVAAVE  187 (829)
T ss_pred             HHHh--hhh--ccchhhhcCCc-ccccccccceeecccCceeecccCchhhhhhh---hhhhhcccCCccccchhHHHHH
Confidence            4445  677  89999999998 89999999999999999999999997655322   2234567899999999986422


Q ss_pred             CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh
Q psy16840        213 HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP  292 (413)
Q Consensus       213 ~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~  292 (413)
                      .. ..|...+|||++|+...|+--.++|-.+..............+.|..-..+...++.+.++++.|+.++|.+||+++
T Consensus       188 rk-ggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptae  266 (829)
T KOG0576|consen  188 RK-GGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAE  266 (829)
T ss_pred             hc-ccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChh
Confidence            21 12389999999999999998888886554433333334444555554444567889999999999999999999998


Q ss_pred             HHHH
Q psy16840        293 TIRA  296 (413)
Q Consensus       293 ~i~~  296 (413)
                      .++.
T Consensus       267 klL~  270 (829)
T KOG0576|consen  267 KLLQ  270 (829)
T ss_pred             hhee
Confidence            8765

>KOG0590|consensus

Probab=99.74  E-value=7.3e-19  Score=175.54  Aligned_cols=154  Identities=18%  Similarity=0.179  Sum_probs=118.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC-CcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      ||+  .|++|||+.|+ .||||||+|++++.+|.+||+|||.+......... .......+|+..|+|||++.+..+.  
T Consensus       428 qL~--~Gv~y~h~~Gi-ahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~yd--  502 (601)
T KOG0590|consen  428 QLL--RGVKYLHSMGL-AHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYD--  502 (601)
T ss_pred             HHH--HHHHHHHhcCc-eeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccC--
Confidence            788  99999999999 99999999999999999999999998765433221 2334567889999999999999885  


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--CCCCCC--CCCCcccccCCChHHHHHHHHHHhccCCCCCCChhH
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--EDCEEP--FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPT  293 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~  293 (413)
                       ....||||.|+++..|.+|+.||......+...  ......  ..-....+...++...+.+|.++|+.||.+|.|+++
T Consensus       503 -pr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~  581 (601)
T KOG0590|consen  503 -PRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQ  581 (601)
T ss_pred             -cchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHH
Confidence             678999999999999999999996544332221  000000  000111122457788999999999999999999999


Q ss_pred             HHHHH
Q psy16840        294 IRARL  298 (413)
Q Consensus       294 i~~~l  298 (413)
                      |++.-
T Consensus       582 i~~d~  586 (601)
T KOG0590|consen  582 ILNDE  586 (601)
T ss_pred             HhhCh
Confidence            98653

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.74  E-value=3.6e-18  Score=149.55  Aligned_cols=113  Identities=27%  Similarity=0.451  Sum_probs=95.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcC-CeEEEEeccccccccccccCCCcccccccCcccccCcccccCC-CCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDT-HAPI  216 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~  216 (413)
                      +++  ++|.|||+.++ +|+||+|.||+++. ++.++|+|||.+........   ......+...|++||.+... ..  
T Consensus       100 ~l~--~~l~~lh~~~~-~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~--  171 (215)
T cd00180         100 QIL--EGLEYLHSNGI-IHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---LLKTIVGTPAYMAPEVLLGKGYY--  171 (215)
T ss_pred             HHH--HHHHHHHhCCe-eccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---hhhcccCCCCccChhHhcccCCC--
Confidence            666  99999999999 99999999999999 89999999999876533221   12234567889999998776 44  


Q ss_pred             CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       217 ~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                        +.++|+|++|++++++                                    ..+.+++.+|++.+|.+||++.+++.
T Consensus       172 --~~~~D~~~lg~~~~~l------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~  213 (215)
T cd00180         172 --SEKSDIWSLGVILYEL------------------------------------PELKDLIRKMLQKDPEKRPSAKEILE  213 (215)
T ss_pred             --CchhhhHHHHHHHHHH------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhh
Confidence              8899999999999999                                    57899999999999999999999876


Q ss_pred             H
Q psy16840        297 R  297 (413)
Q Consensus       297 ~  297 (413)
                      .
T Consensus       214 ~  214 (215)
T cd00180         214 H  214 (215)
T ss_pred             C
Confidence            4

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1167|consensus

Probab=99.72  E-value=4.1e-18  Score=155.33  Aligned_cols=165  Identities=21%  Similarity=0.278  Sum_probs=113.1

Q ss_pred             cCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-eEEEEecccccccccccc------C--------
Q psy16840        125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAE------N--------  189 (413)
Q Consensus       125 ~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~------~--------  189 (413)
                      .++...+..+++  .++  .||.++|++|| |||||||.|+|.+.. +.-.|.|||+|.......      .        
T Consensus       128 ~l~~~~i~~Yl~--~ll--~Al~~~h~~GI-vHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~  202 (418)
T KOG1167|consen  128 SLSLAEIRWYLR--NLL--KALAHLHKNGI-VHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATP  202 (418)
T ss_pred             cCCHHHHHHHHH--HHH--HHhhhhhccCc-cccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCc
Confidence            345556666666  888  99999999999 999999999999864 677899999997211000      0        


Q ss_pred             ---------------------------CCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q psy16840        190 ---------------------------DSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFG  242 (413)
Q Consensus       190 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~  242 (413)
                                                 .........||++|.|||++...+..   +.++||||.|+|+..++++..||.
T Consensus       203 ~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Q---ttaiDiws~GVI~Lslls~~~PFf  279 (418)
T KOG1167|consen  203 AMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQ---TTAIDIWSAGVILLSLLSRRYPFF  279 (418)
T ss_pred             cccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCc---CCccceeeccceeehhhccccccc
Confidence                                       00001123689999999999776542   889999999999999999999984


Q ss_pred             CCCCCCCC--------------------CC--CCC-------------------CCCCC------CcccccCCChHHHHH
Q psy16840        243 GCGLYEPK--------------------GE--DCE-------------------EPFRP------NLELLRDSCEPFVLA  275 (413)
Q Consensus       243 ~~~~~~~~--------------------~~--~~~-------------------~~~~~------~~~~~~~~~~~~l~~  275 (413)
                      .....-..                    ..  ...                   ....+      ......+..+..+.+
T Consensus       280 ~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~d  359 (418)
T KOG1167|consen  280 KAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLD  359 (418)
T ss_pred             cCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHH
Confidence            32200000                    00  000                   00000      001111234568999


Q ss_pred             HHHHHhccCCCCCCChhHHHHH
Q psy16840        276 CMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       276 li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ++.+|+..||.+|.|+++.+.+
T Consensus       360 lLdk~le~np~kRitAEeALkH  381 (418)
T KOG1167|consen  360 LLDKCLELNPQKRITAEDALKH  381 (418)
T ss_pred             HHHHHccCChhhcccHHHHhcC
Confidence            9999999999999999998754

>KOG1152|consensus

Probab=99.71  E-value=3.9e-18  Score=160.68  Aligned_cols=94  Identities=22%  Similarity=0.430  Sum_probs=83.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .|+++||+.|| ||||||-+||.++++|.+||+|||.|.+....+.     ....||..|.|||++.+.+|.   
T Consensus       678 QV~--agi~hlh~~~i-vhrdikdenvivd~~g~~klidfgsaa~~ksgpf-----d~f~gtv~~aapevl~g~~y~---  746 (772)
T KOG1152|consen  678 QVV--AGIKHLHDQGI-VHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPF-----DVFVGTVDYAAPEVLGGEKYL---  746 (772)
T ss_pred             HHH--hccccccccCc-eecccccccEEEecCCeEEEeeccchhhhcCCCc-----ceeeeeccccchhhhCCCccC---
Confidence            787  89999999999 9999999999999999999999999877644332     356899999999999999884   


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCC
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGG  243 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~  243 (413)
                      +..-|||++|++||.+.....||..
T Consensus       747 gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  747 GKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             CCcchhhhhhheeeEEEeccCCCcC
Confidence            7788999999999999999999864

>KOG0195|consensus

Probab=99.71  E-value=1.1e-17  Score=144.14  Aligned_cols=148  Identities=25%  Similarity=0.344  Sum_probs=117.1

Q ss_pred             CCchHHhhHhhhcCC-CcccCCCCCCCeEEcCCeEEEEe--ccccccccccccCCCcccccccCcccccCcccccCCCCC
Q psy16840        139 DGIPRQGMTFLHRSP-IGCHGNLKSSNCVVTSRWVLQVT--DFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAP  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~-iiiHrdlkp~Nill~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  215 (413)
                      |++  +|++|||+-. +|.---|.+..+++|++.+++|+  |--++          .......-.+.||+||.++..+..
T Consensus       297 dia--rgmaflhslep~ipr~~lns~hvmidedltarismad~kfs----------fqe~gr~y~pawmspealqrkped  364 (448)
T KOG0195|consen  297 DIA--RGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFS----------FQEVGRAYSPAWMSPEALQRKPED  364 (448)
T ss_pred             HHH--hhHHHHhhcchhhhhhhcccceEEecchhhhheecccceee----------eeccccccCcccCCHHHHhcCchh
Confidence            555  9999999853 33445688999999999888875  32221          111122336889999999876653


Q ss_pred             CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        216 IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                      . .-.++|+|||++++||+.|+..||.+.+..+.-..+...+.++.++   ++++..+..||.-|++.||.+||.|+.|+
T Consensus       365 ~-n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ip---pgis~hm~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  365 L-NIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIP---PGISRHMNKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             c-chhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCC---CCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence            2 2568999999999999999999999988888777777777777664   78999999999999999999999999999


Q ss_pred             HHHHhhc
Q psy16840        296 ARLKHMK  302 (413)
Q Consensus       296 ~~l~~~~  302 (413)
                      -.|+++.
T Consensus       441 pilekm~  447 (448)
T KOG0195|consen  441 PILEKMI  447 (448)
T ss_pred             hhHHHhc
Confidence            9988763

>KOG1290|consensus

Probab=99.70  E-value=4.1e-17  Score=151.05  Aligned_cols=96  Identities=15%  Similarity=0.065  Sum_probs=66.3

Q ss_pred             cccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC--CCC--------------------------
Q psy16840        200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE--PKG--------------------------  251 (413)
Q Consensus       200 t~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~--~~~--------------------------  251 (413)
                      |..|.|||++.+..|    +..+||||++|+++||+||...|...+-..  ..+                          
T Consensus       414 TRQYRapEVllGsgY----~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRd  489 (590)
T KOG1290|consen  414 TRQYRAPEVLLGSGY----STSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRD  489 (590)
T ss_pred             hhhccCcceeecCCC----CCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHh
Confidence            678999999999988    999999999999999999988774322111  000                          


Q ss_pred             ---------CCCCCCCCCCc------ccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHH
Q psy16840        252 ---------EDCEEPFRPNL------ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK  299 (413)
Q Consensus       252 ---------~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~  299 (413)
                               .+..-.+-|..      ..++..-..++.+++.-||+.+|++|||+.++++..+
T Consensus       490 FFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPw  552 (590)
T KOG1290|consen  490 FFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPW  552 (590)
T ss_pred             hhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCcc
Confidence                     00000000000      0111223457899999999999999999999997654

>KOG4158|consensus

Probab=99.69  E-value=1.5e-16  Score=144.01  Aligned_cols=156  Identities=23%  Similarity=0.261  Sum_probs=111.4

Q ss_pred             ccCCchHHhhHhhhcCCCcccCCCCCCCeEEc--CC--eEEEEeccccccccccccCC---CcccccccCcccccCcccc
Q psy16840        137 FGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVT--SR--WVLQVTDFGLHELRHCAEND---SIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       137 ~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~--~~--~~~kl~Dfg~a~~~~~~~~~---~~~~~~~~gt~~y~aPE~~  209 (413)
                      ++|++  +|+.|||++|+ .|||||++|||+.  ++  -.+.|+|||.+-.-....-.   ....-..-|+..-||||+.
T Consensus       347 laQlL--Eav~hL~~hgv-AhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~  423 (598)
T KOG4158|consen  347 LAQLL--EAVTHLHKHGV-AHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIA  423 (598)
T ss_pred             HHHHH--HHHHHHHHccc-hhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhh
Confidence            44888  99999999999 9999999999993  33  47899999986432211100   1111233567889999998


Q ss_pred             cCCCCC--CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        210 RDTHAP--IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       210 ~~~~~~--~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      ...+.+  .-.-.++|.|+.|.+.||+++...||.+...........   ....++.+++.+++.+++++...|+.||++
T Consensus       424 ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Y---qe~qLPalp~~vpp~~rqlV~~lL~r~psk  500 (598)
T KOG4158|consen  424 TAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTY---QESQLPALPSRVPPVARQLVFDLLKRDPSK  500 (598)
T ss_pred             hcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhh---hhhhCCCCcccCChHHHHHHHHHhcCCccc
Confidence            765432  112468999999999999999999998754322222221   223344456889999999999999999999


Q ss_pred             CCChhHHHHHH
Q psy16840        288 RPDFPTIRARL  298 (413)
Q Consensus       288 Rps~~~i~~~l  298 (413)
                      |++..-..+.|
T Consensus       501 Rvsp~iAANvl  511 (598)
T KOG4158|consen  501 RVSPNIAANVL  511 (598)
T ss_pred             cCCccHHHhHH
Confidence            99876554444

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.67  E-value=1.8e-17  Score=149.14  Aligned_cols=132  Identities=19%  Similarity=0.160  Sum_probs=86.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCC----C
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTH----A  214 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~  214 (413)
                      |++  +.+++||+.|+ +|+||+|+|++++.+|.++|+||+.........     .. ...+..|.|||......    .
T Consensus       153 Q~I--~lvA~Lh~~Gl-VHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~-----~~-~~~~~~~~PPe~~~~~~~~~~~  223 (288)
T PF14531_consen  153 QMI--RLVANLHSYGL-VHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY-----RC-SEFPVAFTPPELESCAGQFGQN  223 (288)
T ss_dssp             HHH--HHHHHHHHTTE-EEST-SGGGEEE-TTS-EEE--GGGEEETTEEE-----EG-GGS-TTTS-HHHHHHHTSCHHS
T ss_pred             HHH--HHHHHHhhcce-EecccceeeEEEcCCCCEEEcChHHHeecCcee-----ec-cCCCcccCChhhhhhhcccCcc
Confidence            555  89999999999 999999999999999999999998765432211     11 22356789999764421    1


Q ss_pred             CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        215 PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       215 ~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      ...++.+.|.|++|+++|.|+++..||...........        ...... ++|+.++.||..+|+.+|.+|
T Consensus       224 ~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~--------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  224 NAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW--------DFSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             EEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG--------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             cceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc--------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence            12348899999999999999999999975432111111        222233 788999999999999999987

>KOG0606|consensus

Probab=99.67  E-value=2.2e-17  Score=165.73  Aligned_cols=139  Identities=22%  Similarity=0.253  Sum_probs=109.0

Q ss_pred             HhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEecccccccccccc------------CCCcccccccCcccccCcccccC
Q psy16840        144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE------------NDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       144 ~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------------~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      .+++|||+.|| +|||+||+|.+|+.-|++|+.|||+++......            .........+||+.|.|||++..
T Consensus       154 la~Eylh~ygi-vhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr  232 (1205)
T KOG0606|consen  154 LAVEYLHSYGI-VHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR  232 (1205)
T ss_pred             HHhHhhccCCe-ecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh
Confidence            69999999999 999999999999999999999999987532211            11122345689999999999988


Q ss_pred             CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        212 THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       212 ~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      ..|    +..+|.|++|+|+||.+.|..||.+....+.....+.....-  ++-....++++++++.++|..+|..|-
T Consensus       233 qgy----gkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~w--pE~dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  233 QGY----GKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW--PEEDEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             hcc----CCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccc--cccCcCCCHHHHHHHHHHHHhChHhhc
Confidence            887    899999999999999999999999876444443322222111  111245788999999999999999994

>KOG1164|consensus

Probab=99.65  E-value=3.2e-16  Score=147.15  Aligned_cols=159  Identities=16%  Similarity=0.197  Sum_probs=114.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-----eEEEEecccccc--ccccccCC---Cc-c-cccccCcccccCc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-----WVLQVTDFGLHE--LRHCAEND---SI-G-EHQYYRSLLWKAP  206 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-----~~~kl~Dfg~a~--~~~~~~~~---~~-~-~~~~~gt~~y~aP  206 (413)
                      |++  .+|.+||+.|+ +||||||.|+++...     ..+.|.|||+++  ........   .. . .....||..|+++
T Consensus       130 q~l--~~l~~lH~~G~-iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~  206 (322)
T KOG1164|consen  130 QNL--NALEDLHSKGF-IHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASI  206 (322)
T ss_pred             HHH--HHHHHHHhcCc-ccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccH
Confidence            455  99999999999 999999999999854     479999999998  33222211   11 1 2234599999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      .+..+...    +++.|+||++.++.+++.|..||.+..........................+.++..+...+-..+..
T Consensus       207 ~~H~~~e~----~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (322)
T KOG1164|consen  207 NVHLGIEQ----GRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYE  282 (322)
T ss_pred             HHhCCCcc----CCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCc
Confidence            99999888    99999999999999999999999765432221111111111100002234567788888888889999


Q ss_pred             CCCChhHHHHHHHhhccc
Q psy16840        287 SRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       287 ~Rps~~~i~~~l~~~~~~  304 (413)
                      .+|....+...++.....
T Consensus       283 ~~Pdy~~~~~~l~~~~~~  300 (322)
T KOG1164|consen  283 DKPDYEKLAELLKDVFDS  300 (322)
T ss_pred             CCCCHHHHHHHHHHHHHh
Confidence            999999998887765443

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.62  E-value=2.5e-16  Score=139.75  Aligned_cols=103  Identities=23%  Similarity=0.398  Sum_probs=82.3

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  +++  .+|.|||++++ +|+||+|.||+++.++.++|+|||.+.........  ......++..|++||.+
T Consensus        99 ~~~~~~~--~l~--~~l~~lh~~~i-~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~~~pe~~  171 (225)
T smart00221       99 EARFYLR--QIL--EALEYLHSLGI-VHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA--LLKTVKGTPFYLAPEVL  171 (225)
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc--cccceeccCCcCCHhHh
Confidence            3344444  677  99999999999 99999999999999999999999998776433211  12234567889999998


Q ss_pred             c-CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCC
Q psy16840        210 R-DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG  243 (413)
Q Consensus       210 ~-~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~  243 (413)
                      . ....    +.++|+||||++++++++|+.||..
T Consensus       172 ~~~~~~----~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      172 LGGKGY----GEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             cCCCCC----CchhhHHHHHHHHHHHHHCCCCccc
Confidence            4 3333    7799999999999999999999965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1163|consensus

Probab=99.62  E-value=1.1e-16  Score=135.78  Aligned_cols=208  Identities=14%  Similarity=0.179  Sum_probs=147.5

Q ss_pred             ccccCccccCCCCCchhhhhhhhhhhHhhhhhhhccCCccchhhccccc-CChhhHhhhccccCCchHHhhHhhhcCCCc
Q psy16840         77 NQVSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIH-SDIIIITYLMNFGDGIPRQGMTFLHRSPIG  155 (413)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~i~~a~gL~yLH~~~ii  155 (413)
                      ....++|......-.+++.+|.++|+.--.+..+            .+| .....++.+|..-|++  .-++|+|.+++ 
T Consensus        68 ~~g~GiP~i~~y~~e~~ynvlVMdLLGPsLEdLf------------nfC~R~ftmkTvLMLaDQml--~RiEyvH~r~f-  132 (341)
T KOG1163|consen   68 QGGVGIPHIRHYGTEKDYNVLVMDLLGPSLEDLF------------NFCSRRFTMKTVLMLADQML--SRIEYVHLRNF-  132 (341)
T ss_pred             ccCCCCchhhhhccccccceeeeeccCccHHHHH------------HHHhhhhhHHhHHHHHHHHH--HHHHHHHhhcc-
Confidence            3444666666555556677777766422222111            111 1122334455445777  89999999999 


Q ss_pred             ccCCCCCCCeEEcCC---eEEEEeccccccccccccCCC----cccccccCcccccCcccccCCCCCCCCCccchhHHHH
Q psy16840        156 CHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCAENDS----IGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFA  228 (413)
Q Consensus       156 iHrdlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG  228 (413)
                      |||||||+|.|..-+   ..+.++|||+|+.+.......    .......||..|.+-..+.+...    +.+.|+-|+|
T Consensus       133 iHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eq----SRRDDmeSvg  208 (341)
T KOG1163|consen  133 IHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQ----SRRDDMESVG  208 (341)
T ss_pred             ccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhh----hhhhhhhhhc
Confidence            999999999999643   578999999998764432221    22345679999999888887776    8999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCC---CCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        229 VILHEIIGRRGPFGGCGLYEPKG---EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       229 ~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      .+|.+..-|..||++.......+   .+.+.....++..+..+.|.++...+.-|-..--++-|+..-+.+.+.-+..
T Consensus       209 YvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr  286 (341)
T KOG1163|consen  209 YVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR  286 (341)
T ss_pred             ceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence            99999999999999865332222   3444445555666778999999999999999999999999888777766544

>KOG3619|consensus

Probab=99.60  E-value=6.7e-16  Score=155.19  Aligned_cols=63  Identities=51%  Similarity=0.827  Sum_probs=61.3

Q ss_pred             CCcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcceeEEEEEe
Q psy16840          1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLV   64 (413)
Q Consensus         1 ~p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~~~~~~l~   64 (413)
                      .|+||+||+|||+||||+|+|.||+|||+|+|+..|...| |.|++||.+.+||||++.||++.
T Consensus       779 KPqYDIWGNTVNvASRMdSTGv~g~IQVTEEt~~iL~~~g-y~~~~RG~i~VKGkGel~Tyfl~  841 (867)
T KOG3619|consen  779 KPQYDIWGNTVNVASRMDSTGVPGRIQVTEETANILQGLG-YRFECRGVINVKGKGELETYFLC  841 (867)
T ss_pred             CCCccccccchhhhhcccccCCCCeEEecHHHHHHHhcCC-eeEEecceEEEecccceeEEEec
Confidence            4999999999999999999999999999999999999986 99999999999999999999997

>KOG1033|consensus

Probab=99.59  E-value=2.5e-16  Score=148.03  Aligned_cols=138  Identities=22%  Similarity=0.324  Sum_probs=97.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC---CcccccccCcccccCcccccCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND---SIGEHQYYRSLLWKAPELLRDTHAP  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~  215 (413)
                      |+.  .|+.|   ++. +|||+||.||+...+..+||.|||+..........   ........||..||+||.+.+..+ 
T Consensus       367 q~~--~~~~y---k~~-ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y-  439 (516)
T KOG1033|consen  367 QIA--PAVEY---KGL-IHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQY-  439 (516)
T ss_pred             hhc--cchhh---ccc-hhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhh-
Confidence            666  89999   888 89999999999999989999999997654433210   112345579999999999999988 


Q ss_pred             CCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhH
Q psy16840        216 IRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPT  293 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~  293 (413)
                         +.++||||||++|+|++. -..+|.......   .+....++|..   ..+.| .-..|+.+++...|.+||++.+
T Consensus       440 ---~~kvdIyaLGlil~EL~~~f~T~~er~~t~~---d~r~g~ip~~~---~~d~p-~e~~ll~~lls~~p~~RP~~~~  508 (516)
T KOG1033|consen  440 ---SEKVDIYALGLILAELLIQFSTQFERIATLT---DIRDGIIPPEF---LQDYP-EEYTLLQQLLSPSPEERPSAIE  508 (516)
T ss_pred             ---hhhcchhhHHHHHHHHHHHhccHHHHHHhhh---hhhcCCCChHH---hhcCc-HHHHHHHHhcCCCcccCchHHH
Confidence               999999999999999997 333433211111   11111111111   12333 3468999999999999995443

>KOG1165|consensus

Probab=99.59  E-value=3.7e-15  Score=132.17  Aligned_cols=159  Identities=13%  Similarity=0.163  Sum_probs=128.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-----eEEEEeccccccccccccCCC----cccccccCcccccCcccc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-----WVLQVTDFGLHELRHCAENDS----IGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-----~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~  209 (413)
                      |++  .-++|+|++.+ |.|||||+|.||...     ..+.++|||+|+.+.......    ....+..||..||+-...
T Consensus       132 Qmi--~rie~vH~k~L-IYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTH  208 (449)
T KOG1165|consen  132 QMI--TRIEYVHEKDL-IYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTH  208 (449)
T ss_pred             HHH--HHHHHHHhcce-eecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeecc
Confidence            555  89999999999 999999999999743     579999999999875543322    223466899999999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC---CCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEP---KGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      .+...    +.+.|+-|||-++.+.+-|..||.+..-...   .+.+.......++..+..++|.++..-+.-.-..+-.
T Consensus       209 lGrEQ----SRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~  284 (449)
T KOG1165|consen  209 LGREQ----SRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFF  284 (449)
T ss_pred             ccchh----hhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcc
Confidence            99888    9999999999999999999999998653322   2345555555666777889999999999999899999


Q ss_pred             CCCChhHHHHHHHhhccc
Q psy16840        287 SRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       287 ~Rps~~~i~~~l~~~~~~  304 (413)
                      +-|+.+-+...+..+...
T Consensus       285 E~PDYdylr~Lf~dvldr  302 (449)
T KOG1165|consen  285 ETPDYDYLRKLFDDVLDR  302 (449)
T ss_pred             cCCCHHHHHHHHHHHHHh
Confidence            999999888777665443

>KOG1240|consensus

Probab=99.57  E-value=5.3e-16  Score=156.24  Aligned_cols=152  Identities=19%  Similarity=0.232  Sum_probs=101.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCccc----ccccCcccccCcccccCCC-
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGE----HQYYRSLLWKAPELLRDTH-  213 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~-  213 (413)
                      ||+  .||.-+|..|+ +|||||.+||||++=+.+.|+||..-+..--.......-    .+...-.+|.|||.+.... 
T Consensus       128 QLL--~al~qcH~~gV-cHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~  204 (1431)
T KOG1240|consen  128 QLL--KALSQCHKLGV-CHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALG  204 (1431)
T ss_pred             HHH--HHHHHHHHcCc-cccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhcccc
Confidence            777  89999999999 999999999999998889999998755321111111000    1112235799999875522 


Q ss_pred             ------CCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        214 ------APIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       214 ------~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                            .....+++.||||+||++.|+++ |++||.-..........   ...+. ..+..--+..+++++..|++.||.
T Consensus       205 ~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~---~~~~e-~~Le~Ied~~~Rnlil~Mi~rdPs  280 (1431)
T KOG1240|consen  205 KTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN---ADDPE-QLLEKIEDVSLRNLILSMIQRDPS  280 (1431)
T ss_pred             ccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC---ccCHH-HHHHhCcCccHHHHHHHHHccCch
Confidence                  01114789999999999999998 68888532211111100   00000 001111234799999999999999


Q ss_pred             CCCChhHHHHH
Q psy16840        287 SRPDFPTIRAR  297 (413)
Q Consensus       287 ~Rps~~~i~~~  297 (413)
                      +|.++++.++.
T Consensus       281 ~RlSAedyL~~  291 (1431)
T KOG1240|consen  281 KRLSAEDYLQK  291 (1431)
T ss_pred             hccCHHHHHHh
Confidence            99999999876

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.55  E-value=5.6e-15  Score=138.47  Aligned_cols=159  Identities=19%  Similarity=0.225  Sum_probs=112.1

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe-EEEEeccccccccccccCCCc---ccccccCcccccC
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW-VLQVTDFGLHELRHCAENDSI---GEHQYYRSLLWKA  205 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~~~---~~~~~~gt~~y~a  205 (413)
                      ....++.  +++  .|+.|+|+.++ +|||+||+||+++..+ .++++|||.++..........   ......|+..|+|
T Consensus       102 ~~~~~~~--~~~--~~l~~~H~~~~-~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~  176 (384)
T COG0515         102 EALFILA--QIL--SALEYLHSKGI-IHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA  176 (384)
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCe-eccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCC
Confidence            3344444  777  89999999998 9999999999999988 799999999875543322211   2356688999999


Q ss_pred             cccccCC---CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCC---CCCCCCCCCCCCC-CcccccC----CChHHHH
Q psy16840        206 PELLRDT---HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLY---EPKGEDCEEPFRP-NLELLRD----SCEPFVL  274 (413)
Q Consensus       206 PE~~~~~---~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~~-~~~~~~~----~~~~~l~  274 (413)
                      ||.+.+.   ..    +...|+||+|++++++++|..||......   ............+ .......    .....+.
T Consensus       177 pe~~~~~~~~~~----~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (384)
T COG0515         177 PEVLLGLSLAYA----SSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAAS  252 (384)
T ss_pred             HHHhcCCCCCCC----CchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHH
Confidence            9999873   44    88999999999999999999997654421   0000000001101 0000011    1235789


Q ss_pred             HHHHHHhccCCCCCCChhHHHHH
Q psy16840        275 ACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       275 ~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +++..|+..+|..|.+.......
T Consensus       253 ~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         253 DLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             HHHHHHHhcCchhcCCHHHHhhc
Confidence            99999999999999998876654

>KOG1023|consensus

Probab=99.55  E-value=3.5e-15  Score=142.84  Aligned_cols=69  Identities=58%  Similarity=0.962  Sum_probs=65.9

Q ss_pred             CCcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcceeEEEEEecccccc
Q psy16840          1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGATEGA   70 (413)
Q Consensus         1 ~p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~~~~~~l~~~~~~~   70 (413)
                      |||||+||||||+||||||+|. ++|++|++++.+|...++|.++.||.+.+||+|.+.+||+.+..+..
T Consensus       411 mPRYclFgDtvn~AsrMes~G~-~~i~~s~~~~~~l~~~~~~~~e~rG~v~~kgkg~~~t~wl~g~~~~~  479 (484)
T KOG1023|consen  411 MPRYCLFGDTVNTASRMESNGK-LMIHLSEEAKNLLTERPQFETEERGLVELKGKGVMSTYWLLGESSKS  479 (484)
T ss_pred             CCcccchhhHHHHHhhhhhcCC-eEEEecHHHHHHHHhcCceeeeccCcEEeecCceeeeEEeccCcccc
Confidence            8999999999999999999999 99999999999998877899999999999999999999999888764

>KOG0603|consensus

Probab=99.55  E-value=5.3e-16  Score=148.67  Aligned_cols=125  Identities=21%  Similarity=0.283  Sum_probs=100.8

Q ss_pred             HhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccch
Q psy16840        144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKAD  223 (413)
Q Consensus       144 ~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~D  223 (413)
                      -|++++|+.++ +|||+|++||+++.+|++|+.|||+++..-....       .+||..|||||++++  .    ...+|
T Consensus       108 Lald~lh~l~i-iyrd~k~enilld~~Ghi~~tdfglske~v~~~~-------~cgt~eymApEI~~g--h----~~a~D  173 (612)
T KOG0603|consen  108 LALDHLHKLGI-AYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI-------ACGTYEYRAPEIING--H----LSAAD  173 (612)
T ss_pred             HHHhhcchhHH-HHhcccccceeecccCccccCCchhhhHhHhhhh-------cccchhhhhhHhhhc--c----CCccc
Confidence            69999999999 9999999999999999999999999886533221       289999999999983  3    77899


Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        224 VYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       224 v~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      .||||++++||++|..||.+.    ....+...     ....+...+..+++++..++..+|..|.-.
T Consensus       174 ~ws~gvl~felltg~~pf~~~----~~~~Il~~-----~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  174 WWSFGVLAFELLTGTLPFGGD----TMKRILKA-----ELEMPRELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             chhhhhhHHHHhhCCCCCchH----HHHHHhhh-----ccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence            999999999999999999861    11111111     112345678889999999999999999654

>KOG4171|consensus

Probab=99.51  E-value=2.5e-14  Score=138.65  Aligned_cols=89  Identities=42%  Similarity=0.586  Sum_probs=77.7

Q ss_pred             HHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHHhcCCHHHHHHHhcCCCCCCCccCeEEEEeccccccc
Q psy16840        318 EKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFT  397 (413)
Q Consensus       318 ~~~~~~~~~~~~~le~~~~~le~~~~e~~~~l~~e~~~~~~ll~~~lp~~va~~lk~g~~v~~e~~~~vti~fsdi~gft  397 (413)
                      ..|......+...+|+..++||    +.+++|++||++++.||.+|+|++||++|++|+.+++..|++|||+|+||+|||
T Consensus       379 ~~Q~~aq~el~~~lE~~~~~Le----~~~~~Le~EKkkTd~LLy~mlP~~VA~qLr~g~~v~a~~f~~vTilFsdIv~Ft  454 (671)
T KOG4171|consen  379 GQQRRAQLELNLELEKLKEKLE----KMTRELEEEKKKTDTLLYSMLPRSVAQQLRQGESVDAKEFDDVTILFSDIVGFT  454 (671)
T ss_pred             chHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhhHHHHHHHhCCHHHHHHHHcCCCcCccccCceEEEEeccchHH
Confidence            3455556667777776665555    566779999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCcccC
Q psy16840        398 AMSAESTPLERPV  410 (413)
Q Consensus       398 ~~~~~~~p~~~~~  410 (413)
                      ++|+.++|+|||.
T Consensus       455 ~ic~~ctp~~vV~  467 (671)
T KOG4171|consen  455 AICSQCTPMQVVN  467 (671)
T ss_pred             hHhhccCcHHHHH
Confidence            9999999999985

>KOG3618|consensus

Probab=99.44  E-value=8.3e-14  Score=134.56  Aligned_cols=66  Identities=44%  Similarity=0.575  Sum_probs=62.1

Q ss_pred             cccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcceeEEEEEecccccc
Q psy16840          3 RYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGATEGA   70 (413)
Q Consensus         3 ~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~~~~~~l~~~~~~~   70 (413)
                      -||+||||||+||||.|+|.+++||||+++|..|.+.  |+|++||.|.+||++.|.+|...+..+..
T Consensus      1210 yYDIWGDtVNiASRMdsTGv~nRIQVs~~~~~~L~~r--YeFe~Rg~v~VKGkd~M~tyLy~~r~d~~ 1275 (1318)
T KOG3618|consen 1210 YYDIWGDTVNIASRMDSTGVENRIQVSEESYRVLSKR--YEFEYRGTVNVKGKDQMKTYLYPKRTDHR 1275 (1318)
T ss_pred             eehhhcchhhhhhhccccCCcceeEecHHHHHHHHhh--ccccccceEEEeccCcceeEEeccccCCC
Confidence            3999999999999999999999999999999999997  99999999999999999999988777654

>KOG0590|consensus

Probab=99.34  E-value=3e-13  Score=135.51  Aligned_cols=153  Identities=17%  Similarity=0.236  Sum_probs=114.6

Q ss_pred             CCchHHhhHhhh-cCCCcccCCCCCCCeEEcCCe-EEEEeccccccccccccCCCcccccccC-cccccCcccccCCCCC
Q psy16840        139 DGIPRQGMTFLH-RSPIGCHGNLKSSNCVVTSRW-VLQVTDFGLHELRHCAENDSIGEHQYYR-SLLWKAPELLRDTHAP  215 (413)
Q Consensus       139 ~i~~a~gL~yLH-~~~iiiHrdlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~~~~  215 (413)
                      |+.  .|+.|+| ..++ .|||+||+|.+++.++ ..|++|||+|................+| ++.|+|||...+..+.
T Consensus       131 ql~--s~l~~~H~~~~~-~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~  207 (601)
T KOG0590|consen  131 QLN--SGLSYLHPENGV-THRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYR  207 (601)
T ss_pred             hhc--cCccccCccccc-ccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhc
Confidence            666  8999999 8999 9999999999999999 9999999999876542223333445577 9999999999886442


Q ss_pred             CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        216 IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                         ....|+||.|+++.-+++|..|+............................+....+++.+++..+|..|.+.+++.
T Consensus       208 ---~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~  284 (601)
T KOG0590|consen  208 ---GPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK  284 (601)
T ss_pred             ---CCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhcccccccc
Confidence               78899999999999999999998754433322211111111101112256777889999999999999999998886


Q ss_pred             HH
Q psy16840        296 AR  297 (413)
Q Consensus       296 ~~  297 (413)
                      ..
T Consensus       285 ~d  286 (601)
T KOG0590|consen  285 LD  286 (601)
T ss_pred             cc
Confidence            43

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.22  E-value=4.5e-12  Score=119.25  Aligned_cols=72  Identities=21%  Similarity=0.193  Sum_probs=56.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCC-CCCCeEEcCCeEEEEeccccccccccccCCCc-----ccccccCcccccCcccccCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNL-KSSNCVVTSRWVLQVTDFGLHELRHCAENDSI-----GEHQYYRSLLWKAPELLRDT  212 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdl-kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~  212 (413)
                      +++  +||.|||++|+ +|||| ||+|||++.++.+||+|||+|+..........     ......+++.|+|||.+...
T Consensus       119 ~i~--~aL~~lH~~gI-iHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        119 SAH--RALRDLHRAGI-THNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             HHH--HHHHHHHHCCC-eeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            677  99999999999 99999 99999999999999999999987643321111     11345678889999998654


Q ss_pred             C
Q psy16840        213 H  213 (413)
Q Consensus       213 ~  213 (413)
                      .
T Consensus       196 ~  196 (365)
T PRK09188        196 E  196 (365)
T ss_pred             h
Confidence            3

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.20  E-value=3.9e-12  Score=109.10  Aligned_cols=102  Identities=18%  Similarity=0.059  Sum_probs=72.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCC-CCCCeEEcCCeEEEEeccccccccccccCC----Cc------ccccccCcccccCcc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNL-KSSNCVVTSRWVLQVTDFGLHELRHCAEND----SI------GEHQYYRSLLWKAPE  207 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdl-kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----~~------~~~~~~gt~~y~aPE  207 (413)
                      +++  .+|.++|++|+ +|||| ||.|||++.++.++|+|||+|.........    ..      ...-...++.|++|+
T Consensus        99 qi~--~~L~~lH~~GI-vHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~  175 (218)
T PRK12274         99 AAR--RLLQQLHRCGV-AHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPV  175 (218)
T ss_pred             HHH--HHHHHHHHCcC-ccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHH
Confidence            666  89999999999 99999 799999999999999999999754322110    00      001112466777776


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG  245 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~  245 (413)
                      ...-....  .-...+.++.|+-+|.++|+..|+.+++
T Consensus       176 ~~~~l~~~--~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        176 ERRVLKRT--SWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HHhhhccc--hhHHHHHHHhcchHHHHHhccCCccccC
Confidence            54332110  0256788899999999999999875543

>KOG2137|consensus

Probab=99.10  E-value=4.1e-11  Score=116.90  Aligned_cols=150  Identities=18%  Similarity=0.203  Sum_probs=102.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEecccccccccccc------CCCcccccccCcccccCcccccCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE------NDSIGEHQYYRSLLWKAPELLRDT  212 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~~~~~~~~gt~~y~aPE~~~~~  212 (413)
                      +..  .||.|+|.+.-+||++|.|++|.++.++.+||+.|+++....+..      .+............|.|||.+.+.
T Consensus       107 ~v~--dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~  184 (700)
T KOG2137|consen  107 NVA--DGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT  184 (700)
T ss_pred             ccc--chhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence            555  899999975444999999999999999999999999875443211      111111112335679999999886


Q ss_pred             CCCCCCCccchhHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        213 HAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       213 ~~~~~~~~~~Dv~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      ..    +.++|+||+|+++|-+..| +.-+...+.... ..................+|+++++-+.+++..++..||++
T Consensus       185 ~~----~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~-~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~  259 (700)
T KOG2137|consen  185 TN----TPASDVFSLGVLIYTIYNGGKSIIAANGGLLS-YSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTL  259 (700)
T ss_pred             cc----cccccceeeeeEEEEEecCCcchhhccCCcch-hhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcch
Confidence            65    9999999999999999854 443433221111 11111111111112235789999999999999999999977


Q ss_pred             hHHH
Q psy16840        292 PTIR  295 (413)
Q Consensus       292 ~~i~  295 (413)
                      ..+.
T Consensus       260 ~~l~  263 (700)
T KOG2137|consen  260 DLLL  263 (700)
T ss_pred             hhhh
Confidence            7664

>PF00211 Guanylate_cyc: Adenylate and Guanylate cyclase catalytic domain; InterPro: IPR001054 Guanylate cyclases (4

Probab=99.07  E-value=1.8e-10  Score=99.20  Aligned_cols=65  Identities=45%  Similarity=0.627  Sum_probs=60.1

Q ss_pred             CCcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcceeEEEEEec
Q psy16840          1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVG   65 (413)
Q Consensus         1 ~p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~~~~~~l~~   65 (413)
                      .|+|++||++||.|+||++.+.|++|.+|+++|..|.....|.++++|.+.+||++++.+|++.+
T Consensus       120 ~~~~~v~G~~vn~Aarl~~~a~~~~i~vs~~v~~~l~~~~~~~~~~~g~~~lkG~~~~~~y~~~~  184 (184)
T PF00211_consen  120 RPEYDVFGDAVNIAARLESLAPPGQILVSEEVYDALNESDQFRFEELGRVELKGKGPVQTYQLNG  184 (184)
T ss_dssp             SEEEEEESHHHHHHHHHHHTSSTTSEEEEHHHHHHHTTHTTEEEEEEEEEEETTSSEEEEEEEE-
T ss_pred             ccceeeeehhhhhhHHHHHhhcccccccCHHHHHHhcccCceEEEEeeeEEEecCCCcEEEEEEC
Confidence            47899999999999999999999999999999999995456999999999999999999999864

6.1.2 from EC) catalyse the formation of cyclic GMP (cGMP) from GTP. cGMP acts as an intracellular messenger, activating cGMP-dependent kinases and regulating cGMP-sensitive ion channels. The role of cGMP as a second messenger in vascular smooth muscle relaxation and retinal photo-transduction is well established. Guanylate cyclase is found both in the soluble and particulate fractions of eukaryotic cells. The soluble and plasma membrane-bound forms differ in structure, regulation and other properties [, , , ]. Most currently known plasma membrane-bound forms are receptors for small polypeptides. The soluble forms of guanylate cyclase are cytoplasmic heterodimers having alpha and beta subunits. In all characterised eukaryote guanylyl- and adenylyl cyclases, cyclic nucleotide synthesis is carried out by the conserved class III cyclase domain. ; GO: 0016849 phosphorus-oxygen lyase activity, 0009190 cyclic nucleotide biosynthetic process, 0035556 intracellular signal transduction; PDB: 3UVJ_A 1FX4_A 1WC4_B 2BW7_D 1WC1_A 1WC0_A 1WC3_A 1WC5_A 1WC6_A 3ET6_B ....

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.02  E-value=4.2e-11  Score=104.92  Aligned_cols=73  Identities=14%  Similarity=0.155  Sum_probs=54.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      +++  .+|..||+.|+ +|||+||+|++++.++ ++|+|||...........               ........+    
T Consensus       143 ~i~--~~l~~lH~~gi-~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~---------------d~~vler~y----  199 (232)
T PRK10359        143 KIK--ASIESLHQHGM-VSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK---------------DRIDLERHY----  199 (232)
T ss_pred             HHH--HHHHHHHHcCC-ccCCCChHHEEEeCCC-EEEEECCCcccccchhhH---------------HHHHHHhHh----
Confidence            666  89999999999 9999999999999988 999999986543211100               002223333    


Q ss_pred             CccchhHHHHHHHHHH
Q psy16840        219 TQKADVYAFAVILHEI  234 (413)
Q Consensus       219 ~~~~Dv~slG~il~el  234 (413)
                      ..++|+||||+.+...
T Consensus       200 ~~~~di~~lg~~~~~~  215 (232)
T PRK10359        200 GIKNEIKDLGYYLLIY  215 (232)
T ss_pred             cccccccceeEeehHH
Confidence            5689999999987654

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.94  E-value=9.5e-09  Score=95.04  Aligned_cols=167  Identities=16%  Similarity=0.218  Sum_probs=112.6

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      |-|.....+  .|+  .+.+-||.+|. +-+|+.++|+|+++++.+.|.|-..-....    ........+|...|++||
T Consensus       116 w~fllrvaR--nlA--~aFA~lH~~Gh-~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~----ng~~~~cpVg~~eftPPE  186 (637)
T COG4248         116 WDFLLRVAR--NLA--SAFATLHEHGH-VVGDVNQNSFLVSDDSKVVLVDSDSFQINA----NGTLHLCPVGVSEFTPPE  186 (637)
T ss_pred             cHHHHHHHH--HHH--HHHHHHHhcCC-cccccCccceeeecCceEEEEcccceeecc----CCceEecccCccccCCHH
Confidence            333333444  555  89999999999 899999999999999999998754322211    111223457889999999


Q ss_pred             ccc-CCCCCCCCCccchhHHHHHHHHHHHhC-CCCCCCCCCCCCCC---------------CCCCCCCCCCccccc-CCC
Q psy16840        208 LLR-DTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG---------------EDCEEPFRPNLELLR-DSC  269 (413)
Q Consensus       208 ~~~-~~~~~~~~~~~~Dv~slG~il~el~~g-~~pf~~~~~~~~~~---------------~~~~~~~~~~~~~~~-~~~  269 (413)
                      .-+ ........+..+|-|.||+++++++.| ++||.+........               .....+.+|....++ .-.
T Consensus       187 lQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~L  266 (637)
T COG4248         187 LQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSML  266 (637)
T ss_pred             HhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhc
Confidence            876 222222337889999999999999986 99998754221111               011122222221121 347


Q ss_pred             hHHHHHHHHHHhcc--CCCCCCChhHHHHHHHhhcc
Q psy16840        270 EPFVLACMRDCWAE--APESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       270 ~~~l~~li~~cl~~--~P~~Rps~~~i~~~l~~~~~  303 (413)
                      ++++..|..+|+..  ++.-|||++..+..|..+..
T Consensus       267 pp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~  302 (637)
T COG4248         267 PPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ  302 (637)
T ss_pred             CHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence            88999999999975  46789999999888776543

>KOG1166|consensus

Probab=98.93  E-value=1.4e-09  Score=112.06  Aligned_cols=93  Identities=18%  Similarity=0.211  Sum_probs=75.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcC-------CeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-------RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      |++  .-++.||..+| |||||||+|+||..       +..++|+|||.+--+.--... ..-...++|-.+-.+|+..|
T Consensus       802 qml--~ive~lH~~~I-IHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~-~~F~~~~~td~f~C~EM~~g  877 (974)
T KOG1166|consen  802 QML--RIVEHLHAMGI-IHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDG-TKFKAVWHTDLFDCIEMREG  877 (974)
T ss_pred             HHH--HHHHHHHhcce-ecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCC-cEEeeeeccccchhHHHhcC
Confidence            666  89999999999 99999999999952       346899999987543221111 22345577889999999999


Q ss_pred             CCCCCCCCccchhHHHHHHHHHHHhCCC
Q psy16840        212 THAPIRGTQKADVYAFAVILHEIIGRRG  239 (413)
Q Consensus       212 ~~~~~~~~~~~Dv~slG~il~el~~g~~  239 (413)
                      ..+    +...|-|.++.+++-|+.|+.
T Consensus       878 rpW----tYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  878 RPW----TYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             CCC----chhhhhHHHHHHHHHHHHHHH
Confidence            998    999999999999999999865

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.85  E-value=1.3e-09  Score=94.00  Aligned_cols=48  Identities=21%  Similarity=0.146  Sum_probs=40.1

Q ss_pred             HhhhccccCCchHHhhHhh-hcCCCcccCCCCCCCeEEcCCeEEEEecccccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFL-HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR  184 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yL-H~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~  184 (413)
                      ...++.  |++  .+|.|+ |+.|+ +||||||+|||++ ++.++|+|||+|...
T Consensus       119 ~~~i~~--qi~--~~L~~l~H~~gi-iHrDlkP~NIli~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         119 ARELYL--QVI--QIMRILYQDCRL-VHADLSEYNLLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             HHHHHH--HHH--HHHHHHHHhCCc-ccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence            334444  777  999999 69999 9999999999998 468999999998643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0606|consensus

Probab=98.85  E-value=2.6e-09  Score=108.62  Aligned_cols=142  Identities=18%  Similarity=0.126  Sum_probs=108.6

Q ss_pred             HhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccc--------cC--------------------CCcccc
Q psy16840        144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA--------EN--------------------DSIGEH  195 (413)
Q Consensus       144 ~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~--------~~--------------------~~~~~~  195 (413)
                      .+++|||+..+ +|||++|.|+|...++..+++|||........        ..                    ......
T Consensus       915 qs~e~L~s~~r-~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~  993 (1205)
T KOG0606|consen  915 QSLESLHSSLR-KHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKH  993 (1205)
T ss_pred             hhhhccccchh-hcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccc
Confidence            79999999887 89999999999999999999999843321110        00                    001123


Q ss_pred             cccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHH
Q psy16840        196 QYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLA  275 (413)
Q Consensus       196 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (413)
                      ...||+.|.+||.+.+...    ...+|.|++|++++|.++|..||...........+....  ...+.-+...+++.++
T Consensus       994 ~~~~t~~~laPe~~lg~~h----gs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~--~~~p~g~~~~s~~aq~ 1067 (1205)
T KOG0606|consen  994 AVVGTPDYLAPEILLGRRH----GSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRD--IPWPEGPEEGSYEAQD 1067 (1205)
T ss_pred             cccCCCcccCCcccccccC----CCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCC--CCCCCCccccChhhhh
Confidence            4578999999999999887    889999999999999999999998766555444433322  2223334567889999


Q ss_pred             HHHHHhccCCCCCCChh
Q psy16840        276 CMRDCWAEAPESRPDFP  292 (413)
Q Consensus       276 li~~cl~~~P~~Rps~~  292 (413)
                      ++...+..+|.+|..+.
T Consensus      1068 ~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1068 LINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             hhhhhhccCchhccCcc
Confidence            99999999999997765

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.83  E-value=1.5e-09  Score=93.90  Aligned_cols=42  Identities=17%  Similarity=0.134  Sum_probs=38.8

Q ss_pred             CCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEecccccccc
Q psy16840        139 DGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR  184 (413)
Q Consensus       139 ~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~  184 (413)
                      +++  .+|.++|+ .|+ +||||||+|||++ ++.++|+|||++...
T Consensus       125 ~l~--~~l~~lH~~~gi-vHrDlkP~NIll~-~~~~~liDFG~a~~~  167 (190)
T cd05145         125 QVV--EQMRRLYQEAGL-VHGDLSEYNILYH-DGKPYIIDVSQAVEL  167 (190)
T ss_pred             HHH--HHHHHHHHhCCE-ecCCCChhhEEEE-CCCEEEEEcccceec
Confidence            777  99999999 999 9999999999999 789999999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0601|consensus

Probab=98.77  E-value=1.1e-08  Score=98.79  Aligned_cols=142  Identities=19%  Similarity=0.161  Sum_probs=101.9

Q ss_pred             hhHhhhcCCCcccCCCCCCCeEEcCC-eEEEEeccccccccccccCCCcc--cccccCcccccCcccccCCCCCCCCCcc
Q psy16840        145 GMTFLHRSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIG--EHQYYRSLLWKAPELLRDTHAPIRGTQK  221 (413)
Q Consensus       145 gL~yLH~~~iiiHrdlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~  221 (413)
                      ||.++|+.++ +|-|+||.||+...+ ..++++|||+...+.........  .....|...|++||..++..     +..
T Consensus       234 al~~~hs~~~-~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~-----~~~  307 (524)
T KOG0601|consen  234 ALSHLHSNNI-VHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLA-----TFA  307 (524)
T ss_pred             cccccCCCcc-cccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcccc-----chH
Confidence            9999999999 999999999999999 78999999998776544322111  12225677899999998765     789


Q ss_pred             chhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        222 ADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       222 ~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                      +|+||+|.++.+..++..++...-.....+  ....+.  ...+....+.++...+..+++.+|..|+++..+..
T Consensus       308 ~di~sl~ev~l~~~l~~~~~~~g~~~~W~~--~r~~~i--p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  308 SDIFSLGEVILEAILGSHLPSVGKNSSWSQ--LRQGYI--PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             hhhcchhhhhHhhHhhcccccCCCCCCccc--cccccC--chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            999999999999998876654321111111  001111  11122445566777899999999999999887754

>KOG1266|consensus

Probab=98.72  E-value=1.6e-08  Score=90.58  Aligned_cols=145  Identities=17%  Similarity=0.190  Sum_probs=92.0

Q ss_pred             CCchHHhhHhhhcC-CCcccCCCCCCCeEEcCCeEEEEeccccccccccccC--CCcccccccCcccccCcccccCCCCC
Q psy16840        139 DGIPRQGMTFLHRS-PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN--DSIGEHQYYRSLLWKAPELLRDTHAP  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~-~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~  215 (413)
                      ||+  .||.|||+. ..|+|+++..+.|++..+|.+|++--.... .+..-.  .........+.++|.+||.=..... 
T Consensus       184 qIl--sal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~-  259 (458)
T KOG1266|consen  184 QIL--SALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNSTREAEKSVNTSLPGFSAPESGTTTNT-  259 (458)
T ss_pred             HHH--hhhhhhhccCCccccCCcchhheeecCCceEEecccCccc-cchhhhhhhHhhhhccccCCccccCCcCccccc-
Confidence            888  999999964 455999999999999999999886422211 100000  0001112234678999997655554 


Q ss_pred             CCCCccchhHHHHHHHHHHHhCCCCC-CCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHH
Q psy16840        216 IRGTQKADVYAFAVILHEIIGRRGPF-GGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI  294 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i  294 (413)
                         +..+|||+||+...+|.-+..-- .+.+.......+....+        ..-.+.-+.++.+|++-+|..||++..+
T Consensus       260 ---~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~--------~len~lqr~~i~kcl~~eP~~rp~ar~l  328 (458)
T KOG1266|consen  260 ---TGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVII--------GLENGLQRGSITKCLEGEPNGRPDARLL  328 (458)
T ss_pred             ---ccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhhee--------eccCccccCcCcccccCCCCCCcchhhh
Confidence               77899999999999998876542 22222222211111110        0011123567899999999999999988


Q ss_pred             HHHH
Q psy16840        295 RARL  298 (413)
Q Consensus       295 ~~~l  298 (413)
                      +-+.
T Consensus       329 lfHp  332 (458)
T KOG1266|consen  329 LFHP  332 (458)
T ss_pred             hcCc
Confidence            6543

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.60  E-value=2.1e-08  Score=89.69  Aligned_cols=42  Identities=21%  Similarity=0.241  Sum_probs=38.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      +|+  .+|.+||++|+ +||||||.|||++.++.++|+|||.+..
T Consensus       150 ~i~--~~l~~lH~~GI-~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        150 AIG--QLIARFHDAGV-YHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             HHH--HHHHHHHHCCC-CCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            566  89999999999 9999999999999888999999998765

>smart00090 RIO RIO-like kinase

Probab=98.53  E-value=3.7e-08  Score=87.97  Aligned_cols=46  Identities=22%  Similarity=0.234  Sum_probs=40.3

Q ss_pred             hhccccCCchHHhhHhhhcCC-CcccCCCCCCCeEEcCCeEEEEecccccccc
Q psy16840        133 YLMNFGDGIPRQGMTFLHRSP-IGCHGNLKSSNCVVTSRWVLQVTDFGLHELR  184 (413)
Q Consensus       133 ~~~~~~~i~~a~gL~yLH~~~-iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~  184 (413)
                      .++.  ||+  .+|.+||++| + +||||||+||+++ ++.++|+|||.+...
T Consensus       152 ~i~~--qi~--~~l~~LH~~g~i-iH~Dikp~NIli~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      152 ELYD--DIL--EEMRKLYKEGEL-VHGDLSEYNILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             HHHH--HHH--HHHHHHHhcCCE-EeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence            4444  777  9999999999 8 9999999999999 789999999997643

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.53  E-value=5.3e-08  Score=84.76  Aligned_cols=43  Identities=16%  Similarity=0.181  Sum_probs=39.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEecccccccc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR  184 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~  184 (413)
                      +++  .++.++|+.|+ +||||||+||+++.++.++|+|||.+...
T Consensus       133 ~i~--~~l~~lh~~gi-~H~Dl~p~Nill~~~~~~~liDfg~~~~~  175 (198)
T cd05144         133 EIL--EEIVKAYKHGI-IHGDLSEFNILVDDDEKIYIIDWPQMVST  175 (198)
T ss_pred             HHH--HHHHHHHHCCC-CcCCCCcccEEEcCCCcEEEEECCccccC
Confidence            666  89999999999 99999999999999999999999997543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0601|consensus

Probab=98.49  E-value=1.3e-07  Score=91.46  Aligned_cols=138  Identities=17%  Similarity=0.190  Sum_probs=92.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-eEEEEeccccccccccccCCCcccccccCccccc--CcccccCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK--APELLRDTHAP  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~  215 (413)
                      +++  .++.++|+..+ +|+|+||+||++..+ +..+++|||.+..+.-.      .....+.-.+.  +|.......+ 
T Consensus       374 q~~--~~l~~i~s~~~-~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~------~~~~~~~~r~~p~~~~~~e~~~~-  443 (524)
T KOG0601|consen  374 QIL--TALNVIHSKLF-VHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS------SGVFHHIDRLYPIAEILLEDYPH-  443 (524)
T ss_pred             HHH--hccccccchhh-hcccccccceeeccchhhhhcccccccccccee------cccccccccccccchhhcccccc-
Confidence            777  89999999999 999999999999986 78899999987532111      11111222333  4444444444 


Q ss_pred             CCCCccchhHHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHH
Q psy16840        216 IRGTQKADVYAFAVILHEIIGRRGP-FGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI  294 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~g~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i  294 (413)
                         ..+.|++|||..+.+.+++..- ..+.....     ......+..    ......+..+.+.+...++..||.+.++
T Consensus       444 ---~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~-----i~~~~~p~~----~~~~~~~q~~~kv~~~~~~~~~~l~~~l  511 (524)
T KOG0601|consen  444 ---LSKADIFSLGLSVDEAITGSPLSESGVQSLT-----IRSGDTPNL----PGLKLQLQVLLKVMINPDRKRRPSAVEL  511 (524)
T ss_pred             ---ccccccccccccccccccCcccCccccccee-----eecccccCC----CchHHhhhhhhhhhcCCccccchhhhhh
Confidence               7899999999999999987543 22211111     111111222    2334677888888999999999998876


Q ss_pred             HHHH
Q psy16840        295 RARL  298 (413)
Q Consensus       295 ~~~l  298 (413)
                      ....
T Consensus       512 ~~~~  515 (524)
T KOG0601|consen  512 SLHS  515 (524)
T ss_pred             cccc
Confidence            5443

>PRK10345 hypothetical protein; Provisional

Probab=98.45  E-value=6e-08  Score=84.66  Aligned_cols=40  Identities=18%  Similarity=0.131  Sum_probs=33.0

Q ss_pred             CCchHHhh-HhhhcCCCcccCCCCCCCeEEcC----CeEEEEeccccc
Q psy16840        139 DGIPRQGM-TFLHRSPIGCHGNLKSSNCVVTS----RWVLQVTDFGLH  181 (413)
Q Consensus       139 ~i~~a~gL-~yLH~~~iiiHrdlkp~Nill~~----~~~~kl~Dfg~a  181 (413)
                      +++  .++ +|||+++| +||||||+|||++.    ++.++|+||+.+
T Consensus       112 ~~L--~~l~~yLh~~~I-vhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        112 QLL--KKLKRYLLDNRI-VTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             HHH--HHHHHHHHHCCE-eecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            555  677 99999999 99999999999974    348999995443

>COG2114 CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms]

Probab=98.40  E-value=2.2e-07  Score=82.51  Aligned_cols=62  Identities=23%  Similarity=0.295  Sum_probs=53.9

Q ss_pred             ccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcceeEEEEEecc
Q psy16840          4 YCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGA   66 (413)
Q Consensus         4 y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~~~~~~l~~~   66 (413)
                      ||+||++||+|+|||+.+.|+.|.+|+.|+..+.+ ..+.+...|...+||.......|....
T Consensus       154 ~~~~G~~VN~AaRLe~~a~~g~i~iS~~~~~~~~~-~~~~~~~~g~~~lkg~~~~~~v~~~~~  215 (227)
T COG2114         154 YTVVGSAVNQAARLESLAKPGQVLLSEATYDLVRD-LVDLFSGLGSHRLKGLARPVRVYQLCH  215 (227)
T ss_pred             eeEechHhHHHHHHHHhcCCCeEEEcHHHHHHHhh-hhhhhhcCCceecCCCCCceEEEEecc
Confidence            79999999999999999999999999999999994 237788889999999987776665433

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.39  E-value=1.8e-07  Score=80.55  Aligned_cols=42  Identities=21%  Similarity=0.173  Sum_probs=38.2

Q ss_pred             CCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEecccccccc
Q psy16840        139 DGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR  184 (413)
Q Consensus       139 ~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~  184 (413)
                      +++  .++.++|+ .++ +||||||+||+++ ++.++|+|||.+...
T Consensus       122 ~~~--~~l~~lh~~~~i-vH~Dl~p~Nili~-~~~~~liDfg~a~~~  164 (187)
T cd05119         122 QIL--ELMRKLYREAGL-VHGDLSEYNILVD-DGKVYIIDVPQAVEI  164 (187)
T ss_pred             HHH--HHHHHHhhccCc-CcCCCChhhEEEE-CCcEEEEECcccccc
Confidence            666  89999999 999 9999999999999 889999999998644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.34  E-value=1.8e-07  Score=82.23  Aligned_cols=41  Identities=32%  Similarity=0.446  Sum_probs=37.3

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      +++  .+|.++|+.++ +|||++|.|||++ ++.++|+|||.+..
T Consensus       103 ~i~--~~l~~lH~~~i-~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879        103 EIG--RLVGKLHSAGI-IHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             HHH--HHHHHHHhCCc-ccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            566  89999999999 9999999999999 77899999998754

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.34  E-value=1.3e-07  Score=82.29  Aligned_cols=41  Identities=34%  Similarity=0.442  Sum_probs=37.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      +++  .+|.+||+.|+ +|||++|.||+++ ++.+++.|||++..
T Consensus        98 ~i~--~~l~~lH~~gi-~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        98 EIG--RLVGKLHKAGI-VHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             HHH--HHHHHHHHCCe-ecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            666  99999999999 9999999999999 78999999999765

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.25  E-value=4e-07  Score=91.64  Aligned_cols=41  Identities=34%  Similarity=0.448  Sum_probs=37.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      +++  .+|.|||+.++ +||||||+|||+ .++.++|+|||+++.
T Consensus       436 ~i~--~~L~~lH~~gi-iHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        436 KVG--EIVAKLHKAGI-VHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             HHH--HHHHHHHhCCC-ccCCCChHHEEE-ECCcEEEEeCccccc
Confidence            777  99999999999 999999999999 567899999999754

>KOG1243|consensus

Probab=98.24  E-value=2e-05  Score=77.54  Aligned_cols=88  Identities=14%  Similarity=0.204  Sum_probs=63.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||..+-++|++|.-+.|+|+..|.+||++|.++........   ......--..|..|+.+....     
T Consensus       112 qIl--~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~---~~~~~~~~~s~~~P~~~~~s~-----  181 (690)
T KOG1243|consen  112 QIL--AALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA---PAKSLYLIESFDDPEEIDPSE-----  181 (690)
T ss_pred             HHH--HHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc---ccccchhhhcccChhhcCccc-----
Confidence            888  9999998554449999999999999999999999988654321111   111112223456666554332     


Q ss_pred             CccchhHHHHHHHHHHHhC
Q psy16840        219 TQKADVYAFAVILHEIIGR  237 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g  237 (413)
                       -..|.|-|||+++|++.|
T Consensus       182 -~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  182 -WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             -cchhhhhHHHHHHHHhCc
Confidence             356999999999999988

>cd07302 CHD cyclase homology domain

Probab=98.22  E-value=1.7e-06  Score=73.51  Aligned_cols=60  Identities=45%  Similarity=0.651  Sum_probs=53.1

Q ss_pred             CcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCc-ceeEEEE
Q psy16840          2 PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGK-GEVLTYW   62 (413)
Q Consensus         2 p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~-g~~~~~~   62 (413)
                      ++|++||++||+|+||++.+.+++|.+|+++++.+... .|.+.+.+.+.++|. +.+..|+
T Consensus       116 ~~~~~~G~~v~~A~rl~~~a~~~~i~vs~~~~~~l~~~-~~~~~~~~~~~l~~~~~~~~~y~  176 (177)
T cd07302         116 PEYTVIGDTVNLAARLESLAKPGQILVSEATYELLGDA-GFEFEELGEVELKGKSGPVRVYR  176 (177)
T ss_pred             cceeEecchHhHHHHHHhcCCCCEEEECHHHHHhhccC-ceEEEEeCCEEecCCCCceEEEE
Confidence            68999999999999999999999999999999999873 389999999999997 4555554

Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.86  E-value=8e-06  Score=67.07  Aligned_cols=42  Identities=24%  Similarity=0.427  Sum_probs=37.0

Q ss_pred             CCchHHhhHhhhcC---CCcccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        139 DGIPRQGMTFLHRS---PIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       139 ~i~~a~gL~yLH~~---~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      +++  .+|++||..   ++ +|+|++|.||+++..+.+++.|||.+..
T Consensus        94 ~~~--~~l~~lh~~~~~~i-~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          94 QLA--ELLAKLHQLPLLVL-CHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             HHH--HHHHHHhCCCceEE-EecCCCcceEEEECCcEEEEEecccccC
Confidence            555  899999974   57 9999999999999989999999998754

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.85  E-value=6.5e-06  Score=70.71  Aligned_cols=41  Identities=15%  Similarity=0.091  Sum_probs=35.7

Q ss_pred             CCchHHhhHhh-hcCCCcccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        139 DGIPRQGMTFL-HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       139 ~i~~a~gL~yL-H~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      +++  .+|..| |+.|+ |||||++.|||+++ +.+.|+|||.+-.
T Consensus       132 ~i~--~~l~~l~H~~gl-VHGDLs~~NIL~~~-~~v~iIDF~qav~  173 (197)
T cd05146         132 QVL--SMMKQLYKECNL-VHADLSEYNMLWHD-GKVWFIDVSQSVE  173 (197)
T ss_pred             HHH--HHHHHHHHhCCe-ecCCCCHHHEEEEC-CcEEEEECCCcee
Confidence            677  899988 89999 99999999999974 5799999998644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.83  E-value=1.1e-05  Score=68.04  Aligned_cols=42  Identities=24%  Similarity=0.374  Sum_probs=35.7

Q ss_pred             CCchHHhhHhhhcCCC----cccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        139 DGIPRQGMTFLHRSPI----GCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~i----iiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      +++  ++|+.||+.++    ++|+|++|.||+++ ++.++++|||.+..
T Consensus        91 ~l~--~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          91 KIA--KLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             HHH--HHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            555  89999998773    38999999999999 56899999998653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.78  E-value=1.7e-05  Score=66.27  Aligned_cols=38  Identities=34%  Similarity=0.589  Sum_probs=33.6

Q ss_pred             HhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       144 ~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      .-+.-||..|+ +|+||.++||++.+.. +.++|||++.+
T Consensus       103 ~~vg~lH~~gi-vHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642         103 RLVGKLHKAGI-VHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             HHHHHHHhcCe-ecCCCccceEEEeCCc-EEEEECCcccc
Confidence            56788999999 9999999999999764 89999999754

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.60  E-value=5.1e-05  Score=74.10  Aligned_cols=39  Identities=21%  Similarity=0.223  Sum_probs=35.4

Q ss_pred             hhHhhhcCCCcccCCCCCCCeEEcCCeEEEEecccccccc
Q psy16840        145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR  184 (413)
Q Consensus       145 gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~  184 (413)
                      .+..+|..|+ +|+|++|.||+++.++.++++|||++...
T Consensus       269 ~l~ql~~~g~-~H~D~hPgNilv~~~g~i~liDfG~~~~l  307 (437)
T TIGR01982       269 FLNQVLRDGF-FHADLHPGNIFVLKDGKIIALDFGIVGRL  307 (437)
T ss_pred             HHHHHHhCCc-eeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence            4678899999 99999999999999999999999997654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG3618|consensus

Probab=97.45  E-value=0.00013  Score=72.16  Aligned_cols=57  Identities=23%  Similarity=0.320  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHhHHHHHHhcCCHHHHHHHhcCCCCCCCccCeEEEEeccccccccccCC
Q psy16840        345 RTMEVYEEKRKTEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAE  402 (413)
Q Consensus       345 ~~~~l~~e~~~~~~ll~~~lp~~va~~lk~g~~v~~e~~~~vti~fsdi~gft~~~~~  402 (413)
                      .+...+..+.++|-||+.++|..+|+.||..++... ..+++-|.|+.|++|..|=.+
T Consensus      1044 d~~riQ~mrdQADwLL~NiIP~HvaE~LK~~~kYSe-NH~~~gviFASIvNfnemYeE 1100 (1318)
T KOG3618|consen 1044 DRTRIQSMRDQADWLLRNIIPYHVAEQLKVSQKYSE-NHDSGGVIFASIVNFNEMYEE 1100 (1318)
T ss_pred             hHHHHHHHHHHHHHHHhccchHHHHHHhhccccccc-cCccceEEEEEeccHHHHHHH
Confidence            344566778899999999999999999999888754 478999999999999887544

>smart00044 CYCc Adenylyl- / guanylyl cyclase, catalytic domain

Probab=97.40  E-value=0.00012  Score=63.42  Aligned_cols=59  Identities=59%  Similarity=0.834  Sum_probs=51.2

Q ss_pred             HHHHhHHHHHHhcCCHHHHHHHhcCC-CCCCCccCeEEEEeccccccccccCCCCCCccc
Q psy16840        351 EEKRKTEDLLHRMLPAPVASRLTRGY-GVEPESYDLVTIYFSDIVGFTAMSAESTPLERP  409 (413)
Q Consensus       351 ~e~~~~~~ll~~~lp~~va~~lk~g~-~v~~e~~~~vti~fsdi~gft~~~~~~~p~~~~  409 (413)
                      +|+++..++|.+.+|+++++++..|. ...+..+..+|+.|.||+|||.++....|-+++
T Consensus         1 ~~~~~~~~ll~~~lP~~v~~~l~~g~~~~~~~~~~~~tvlf~di~g~t~l~~~~~~~~~~   60 (194)
T smart00044        1 EEKRKTDRLLDQLLPASVAESLKRGGSPVPAESYDNVTILFTDIVGFTTLSSEATPEQVV   60 (194)
T ss_pred             ChHHHHHHHHHHhCCHHHHHHHHhCCCCccccccCeEEEEEeEhhhhhhhhhhCCHHHHH
Confidence            36788999999999999999999997 455677899999999999999999887776653

Present in two copies in mammalian adenylyl cyclases. Eubacterial homologues are known. Two residues (Asn, Arg) are thought to be involved in catalysis. These cyclases have important roles in a diverse range of cellular processes.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.40  E-value=0.00011  Score=66.59  Aligned_cols=41  Identities=15%  Similarity=0.089  Sum_probs=36.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcC-------CeEEEEecccccc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-------RWVLQVTDFGLHE  182 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-------~~~~kl~Dfg~a~  182 (413)
                      ++.  ..+.-||..|+ +|+||++.|||++.       ++.+.++||+.++
T Consensus       146 ~la--~~i~~LH~~Gi-~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        146 RVA--TMVRDMHAAGI-NHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHH--HHHHHHHHCcC-ccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            555  89999999999 99999999999975       4689999999864

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.35  E-value=0.00016  Score=63.15  Aligned_cols=42  Identities=24%  Similarity=0.274  Sum_probs=37.4

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe---EEEEeccccccc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW---VLQVTDFGLHEL  183 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~---~~kl~Dfg~a~~  183 (413)
                      ++.  ..++-||..|+ +|+|+++.|||++.+.   .+.++||+.++.
T Consensus       126 ~l~--~~i~~lH~~gi-~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  126 ALA--RLIAKLHDAGI-YHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHH--HHHHHHHHCcC-CCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            555  88999999999 9999999999999876   899999998665

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG3087|consensus

Probab=97.26  E-value=0.00019  Score=59.94  Aligned_cols=39  Identities=33%  Similarity=0.497  Sum_probs=33.6

Q ss_pred             HhhHhhhcCCCcccCCCCCCCeEEcCC---eEEEEeccccccc
Q psy16840        144 QGMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHEL  183 (413)
Q Consensus       144 ~gL~yLH~~~iiiHrdlkp~Nill~~~---~~~kl~Dfg~a~~  183 (413)
                      +.+.-||..++ ||+||..+||++.++   ..+.++|||++..
T Consensus       124 ~~igklH~ndi-iHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  124 ELIGKLHDNDI-IHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             HHHHHhhhCCe-ecccccccceEEecCCCcCceEEEeecchhc
Confidence            78899999999 999999999999655   3568999999643

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.16  E-value=0.00022  Score=61.03  Aligned_cols=38  Identities=29%  Similarity=0.450  Sum_probs=29.0

Q ss_pred             HhhHh-hhcCCCcccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        144 QGMTF-LHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       144 ~gL~y-LH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      ..+.. +|+.|+ +||||.+.|||++++ .+.|+|||.+..
T Consensus       117 ~~~~~~~~~~gi-vHGDLs~~NIlv~~~-~~~iIDf~qav~  155 (188)
T PF01163_consen  117 EEIIKMLHKAGI-VHGDLSEYNILVDDG-KVYIIDFGQAVD  155 (188)
T ss_dssp             HHHHHHHHCTTE-EESS-STTSEEEETT-CEEE--GTTEEE
T ss_pred             HHHHHHHHhcCc-eecCCChhhEEeecc-eEEEEecCccee
Confidence            44444 579999 999999999999988 899999998654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF07701 HNOBA: Heme NO binding associated; InterPro: IPR011645 The HNOBA (Haem NO Binding) domain is found associated with the HNOB domain and IPR001054 from INTERPRO in soluble cyclases and signalling proteins

Probab=97.06  E-value=0.0025  Score=55.78  Aligned_cols=49  Identities=39%  Similarity=0.542  Sum_probs=36.4

Q ss_pred             hhhHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHhHHHHHHhcCCHHHHHHH
Q psy16840        320 QKNIIDQMMEMME-KYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRL  372 (413)
Q Consensus       320 ~~~~~~~~~~~le-~~~~~le~~~~e~~~~l~~e~~~~~~ll~~~lp~~va~~l  372 (413)
                      +......+...++ +..++||    +.+.++++|++++|+||++|+|++||++|
T Consensus       170 q~~a~~~l~~~le~~~~~~Le----~~~~~l~~ek~ktd~LL~~mlP~~VA~~L  219 (219)
T PF07701_consen  170 QQSAELKLAKQLEQEKSAELE----ESMRELEEEKKKTDELLYSMLPPSVADRL  219 (219)
T ss_dssp             HHHHHHHHHHHHH-HHHHHHH----HHHHHHHHHHHHHHHHHHHTS-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCCHHHHhhC
Confidence            3334455555565 5555554    66778999999999999999999999986

The HNOB domain is predicted to function as a haem-dependent sensor for gaseous ligands, and transduce diverse downstream signals in both bacteria and animals.; GO: 0004383 guanylate cyclase activity, 0006182 cGMP biosynthetic process; PDB: 2P04_B 2P08_A 3HLS_E.

>KOG3741|consensus

Probab=97.05  E-value=0.01  Score=57.47  Aligned_cols=121  Identities=10%  Similarity=0.099  Sum_probs=83.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||.  .||.++|+.|+ .-+-|.|.+||++++.+++|+..|.......+..                 +-+.+       
T Consensus       401 QLt--aaL~sIHssGL-Ack~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~-----------------~~le~-------  453 (655)
T KOG3741|consen  401 QLT--AALYSIHSSGL-ACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPT-----------------EPLES-------  453 (655)
T ss_pred             HHH--HHHHHHHhcCc-eeecccHhHeEeeCcceEEEecccceeeecCCCC-----------------cchhH-------
Confidence            666  89999999999 7799999999999999999998888655432220                 11111       


Q ss_pred             CccchhHHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGP-FGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      -.+-|.=.||.++..+.||..- +....           ........+...++.++++++.-....++++ -++.+++..
T Consensus       454 ~Qq~D~~~lG~ll~aLAt~~~ns~~~d~-----------~~~s~~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~  521 (655)
T KOG3741|consen  454 QQQNDLRDLGLLLLALATGTENSNRTDS-----------TQSSHLTRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM  521 (655)
T ss_pred             HhhhhHHHHHHHHHHHhhcccccccccc-----------hHHHHHHHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence            3467889999999999998542 11100           0000112233567888999999888888876 566666654


Q ss_pred             H
Q psy16840        298 L  298 (413)
Q Consensus       298 l  298 (413)
                      +
T Consensus       522 ~  522 (655)
T KOG3741|consen  522 I  522 (655)
T ss_pred             H
Confidence            3

>KOG3619|consensus

Probab=96.96  E-value=0.00046  Score=71.04  Aligned_cols=63  Identities=29%  Similarity=0.360  Sum_probs=49.3

Q ss_pred             cccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEee---cCcceeEEEEEeccc
Q psy16840          3 RYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCM---KGKGEVLTYWLVGAT   67 (413)
Q Consensus         3 ~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~---kg~g~~~~~~l~~~~   67 (413)
                      +||+|+++|.+|.+||+.|.||+++||++|...|...  |.+++....+.   .-+..+.+|.++...
T Consensus       226 q~DVws~dv~lAn~mEs~G~pgrVhis~~Tl~~L~g~--yeve~g~g~~r~~~l~~~~~~ty~i~~~~  291 (867)
T KOG3619|consen  226 QYDVWSNDVTLANHMEAGGVPGRVHISKATLDCLNGE--YEVEPGHGGERDPYLKEHGIETYLIIPPS  291 (867)
T ss_pred             eeeeccchhhhhhhhhhcCCCceeEechhHHHHhCCC--ceeecCCCcccchHHHhcCCceEEecccc
Confidence            7999999999999999999999999999999999875  77776432211   113456688877643

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=96.77  E-value=0.00081  Score=66.91  Aligned_cols=36  Identities=19%  Similarity=0.270  Sum_probs=31.8

Q ss_pred             hhcCCCcccCCCCCCCeEEcCCe----EEEEeccccccccc
Q psy16840        149 LHRSPIGCHGNLKSSNCVVTSRW----VLQVTDFGLHELRH  185 (413)
Q Consensus       149 LH~~~iiiHrdlkp~Nill~~~~----~~kl~Dfg~a~~~~  185 (413)
                      ++..|+ +|+|+||.||+++.++    .+++.|||+....+
T Consensus       276 if~~Gf-fHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        276 VFRDGF-FHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             HHhCCe-eeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            457899 9999999999999887    99999999987654

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=96.59  E-value=0.0017  Score=56.44  Aligned_cols=37  Identities=19%  Similarity=0.355  Sum_probs=33.2

Q ss_pred             HhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       144 ~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      +++.-||+.|+ .|+|..|.|++++.++ +++.||+..+
T Consensus       146 ~~ikqlH~~G~-~HGD~hpgNFlv~~~~-i~iID~~~k~  182 (229)
T PF06176_consen  146 EAIKQLHKHGF-YHGDPHPGNFLVSNNG-IRIIDTQGKR  182 (229)
T ss_pred             HHHHHHHHcCC-ccCCCCcCcEEEECCc-EEEEECcccc
Confidence            88999999999 9999999999999664 8999998743

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK09902 hypothetical protein; Provisional

Probab=96.39  E-value=0.0025  Score=55.16  Aligned_cols=48  Identities=10%  Similarity=0.000  Sum_probs=39.4

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeE--EEEeccccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWV--LQVTDFGLHEL  183 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~--~kl~Dfg~a~~  183 (413)
                      +..++.  ++.  ..++-||+.|+ .|+|+-+.|||++.++.  ++++||.-++.
T Consensus       130 k~~il~--~va--~~ia~LH~~Gv-~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        130 RQAMLK--AVA--LAFKKMHSVNR-QHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             HHHHHH--HHH--HHHHHHHHCCC-cCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            344555  666  89999999999 99999999999986655  99999987553

>KOG0576|consensus

Probab=95.90  E-value=0.0047  Score=61.16  Aligned_cols=85  Identities=16%  Similarity=0.106  Sum_probs=67.0

Q ss_pred             HhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccch
Q psy16840        144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKAD  223 (413)
Q Consensus       144 ~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~D  223 (413)
                      ++|+|+|+..- +|+|    ||+..+ +..|..||+....+....    ......+++.|+|||+...+.+    ....|
T Consensus       347 ~~l~~l~~~~~-~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~----~~~t~~~~~~~~~pev~~~~~~----~~~p~  412 (829)
T KOG0576|consen  347 RPLAELHSSYK-VHRD----NILGSE-EEVKLLDFAVPPQLTRTM----KPRTAIGTPEPLAPEVIQENTI----DGCPD  412 (829)
T ss_pred             ccccccccccc-cCcc----cccccc-cccccccccCCcccCccc----ccccCCCCCCCCCchhhccccc----ccCCC
Confidence            68999998765 7999    777775 578999999876553222    3455678999999999988877    88999


Q ss_pred             hHHHHHHHHHHHhCCCCCC
Q psy16840        224 VYAFAVILHEIIGRRGPFG  242 (413)
Q Consensus       224 v~slG~il~el~~g~~pf~  242 (413)
                      +||+|.-..++.-|.+|-.
T Consensus       413 ~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  413 SGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             ccCCCcchhhcCCCCCCCC
Confidence            9999988778877777643

>KOG1035|consensus

Probab=95.22  E-value=0.024  Score=60.17  Aligned_cols=137  Identities=18%  Similarity=0.226  Sum_probs=91.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCC---CeEEcCCeEEEEe--ccccccccccccCCCcccccccCcccccCcccccCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSS---NCVVTSRWVLQVT--DFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTH  213 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~---Nill~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  213 (413)
                      +++  .||.|+|+... .|.-|..+   +-..+..+.+.++  ||+.++.........    ....+..|.+||......
T Consensus       294 ~~~--~GL~~~h~~~l-~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~----~~~~~~~~~~~e~~~~~~  366 (1351)
T KOG1035|consen  294 KLL--EGLAYLHSLSL-EHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF----SDLLAEIRNADEDLKENT  366 (1351)
T ss_pred             HHh--hhHHHHHHhcc-ceeEEecccccccccCccceeecchhhhcccccCCCcccch----hhcCcccccccccccccc
Confidence            666  89999998876 67766655   4455666777777  998877654433221    222345678888887766


Q ss_pred             CCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhH
Q psy16840        214 APIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPT  293 (413)
Q Consensus       214 ~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~  293 (413)
                      ..  .....|+|.+|.....+..|..+-....              .....++........+...+|+..++++|+++.+
T Consensus       367 ~~--~~r~~dL~~lgll~~~~~~~~~i~~~~~--------------~~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~  430 (1351)
T KOG1035|consen  367 AK--KSRLTDLWCLGLLLLQLSQGEDISEKSA--------------VPVSLLDVLSTSELLDALPKCLDEDSEERLSALE  430 (1351)
T ss_pred             ch--hhhhhHHHHHHHHHhhhhhcCccccccc--------------chhhhhccccchhhhhhhhhhcchhhhhccchhh
Confidence            51  2455799999999999987755421100              0001111222236788889999999999999999


Q ss_pred             HHHHH
Q psy16840        294 IRARL  298 (413)
Q Consensus       294 i~~~l  298 (413)
                      ++...
T Consensus       431 ll~~~  435 (1351)
T KOG1035|consen  431 LLTHP  435 (1351)
T ss_pred             hhhch
Confidence            98764

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=94.64  E-value=0.021  Score=51.12  Aligned_cols=37  Identities=27%  Similarity=0.277  Sum_probs=30.7

Q ss_pred             HhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccc
Q psy16840        144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH  181 (413)
Q Consensus       144 ~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a  181 (413)
                      .-+.-+-..|+ ||+|+.+-||+++++|.+.++||--+
T Consensus       213 ~~~~~~~~~Gi-VHGDlSefNIlV~~dg~~~vIDwPQ~  249 (304)
T COG0478         213 EEVRKAYRRGI-VHGDLSEFNILVTEDGDIVVIDWPQA  249 (304)
T ss_pred             HHHHHHHHcCc-cccCCchheEEEecCCCEEEEeCccc
Confidence            44444447899 99999999999999999999999653

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=94.29  E-value=0.031  Score=49.00  Aligned_cols=31  Identities=26%  Similarity=0.457  Sum_probs=26.3

Q ss_pred             CCCcccCCCCCCCeEEcC--CeEEEEeccccccc
Q psy16840        152 SPIGCHGNLKSSNCVVTS--RWVLQVTDFGLHEL  183 (413)
Q Consensus       152 ~~iiiHrdlkp~Nill~~--~~~~kl~Dfg~a~~  183 (413)
                      ..+ +|+|+.|.||+++.  ++.+.|+||+.+..
T Consensus       174 ~~l-~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         174 PGL-VHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             cEE-EECCCCcccEEEcCCCCcEEEEEecccccc
Confidence            455 99999999999998  67789999998643

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG1826|consensus

Probab=94.10  E-value=0.0076  Score=65.50  Aligned_cols=79  Identities=11%  Similarity=0.069  Sum_probs=64.3

Q ss_pred             ccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHH
Q psy16840        156 CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEII  235 (413)
Q Consensus       156 iHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~  235 (413)
                      +|++||+-|.+|..+..+|++++|+.+.....   ....+...+++.|+.|+..+.-.+    +.++|+|..|+.+|+..
T Consensus      1362 v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~---~sf~Gl~l~sp~~v~qli~N~ik~----t~rsdilr~s~~ly~rs 1434 (2724)
T KOG1826|consen 1362 VSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV---LSFFGLELCSPIYVLQLIKNEIKF----TKRSDILRRSLSLYLRS 1434 (2724)
T ss_pred             hhhhhhhhccceecCCcccccccccccccCch---HhhhhhhhCCHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHh
Confidence            89999999999999999999999998843221   112334566788999999887776    77899999999999998


Q ss_pred             hCCCCC
Q psy16840        236 GRRGPF  241 (413)
Q Consensus       236 ~g~~pf  241 (413)
                      .|..+|
T Consensus      1435 ~~n~~f 1440 (2724)
T KOG1826|consen 1435 DGNAYF 1440 (2724)
T ss_pred             cccHHH
Confidence            887776

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=93.57  E-value=0.082  Score=49.25  Aligned_cols=29  Identities=24%  Similarity=0.289  Sum_probs=26.0

Q ss_pred             CCCcccCCCCCCCeEEcCCeEEEEeccccc
Q psy16840        152 SPIGCHGNLKSSNCVVTSRWVLQVTDFGLH  181 (413)
Q Consensus       152 ~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a  181 (413)
                      .++ +|+|+.+.||+++.++.+.|.||+.+
T Consensus       187 ~~l-~HgD~~~~Nvl~~~~~~~~vIDfd~~  215 (307)
T TIGR00938       187 RGV-IHADLFPDNVLFDGDSVKGVIDFYFA  215 (307)
T ss_pred             Ccc-CCCCCCcCcEEEECCceEEEeecccc
Confidence            567 99999999999999887789999975

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK05231 homoserine kinase; Provisional

Probab=93.19  E-value=0.076  Score=49.72  Aligned_cols=29  Identities=17%  Similarity=0.244  Sum_probs=25.4

Q ss_pred             CCCcccCCCCCCCeEEcCCeEEEEeccccc
Q psy16840        152 SPIGCHGNLKSSNCVVTSRWVLQVTDFGLH  181 (413)
Q Consensus       152 ~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a  181 (413)
                      .++ ||+|+.|.||+++++...-|.||+.+
T Consensus       187 ~~l-iHgD~~~~Nil~~~~~~~~iIDf~~~  215 (319)
T PRK05231        187 RGV-IHADLFRDNVLFEGDRLSGFIDFYFA  215 (319)
T ss_pred             ccc-CCCCCCCCcEEEECCceEEEEecccc
Confidence            467 99999999999997766789999985

>PRK10271 thiK thiamine kinase; Provisional

Probab=93.03  E-value=0.077  Score=45.15  Aligned_cols=26  Identities=19%  Similarity=0.281  Sum_probs=23.6

Q ss_pred             ccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        156 CHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       156 iHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      +|+|+.|.|+++++++ ++|+||+.|.
T Consensus        80 ~H~D~~~~N~~~~~~~-~~lIDwe~a~  105 (188)
T PRK10271         80 LHMDVHAGNLVHSASG-LRLIDWEYAG  105 (188)
T ss_pred             ecCCCCCccEEEECCC-EEEEeCCccc
Confidence            8999999999999887 8899999863

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=92.85  E-value=0.084  Score=47.05  Aligned_cols=30  Identities=30%  Similarity=0.412  Sum_probs=25.4

Q ss_pred             CCCcccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        152 SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       152 ~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      .++ +|+|+.|.||+++++...-|.||+.+.
T Consensus       164 ~~l-~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         164 PVW-FHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             ceE-EeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            345 999999999999987667799999864

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=92.65  E-value=0.067  Score=47.19  Aligned_cols=30  Identities=27%  Similarity=0.378  Sum_probs=20.4

Q ss_pred             CCCcccCCCCCCCeEEc-CCeEEEEecccccc
Q psy16840        152 SPIGCHGNLKSSNCVVT-SRWVLQVTDFGLHE  182 (413)
Q Consensus       152 ~~iiiHrdlkp~Nill~-~~~~~kl~Dfg~a~  182 (413)
                      ..+ +|+|+.|.||+++ +++.+-|.||+.+.
T Consensus       166 ~~~-~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  166 PVL-IHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             EEE-E-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             cEE-EEeccccccceeeeccceeEEEecccce
Confidence            345 9999999999999 66666899999864

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=92.14  E-value=0.088  Score=46.63  Aligned_cols=38  Identities=21%  Similarity=0.196  Sum_probs=32.0

Q ss_pred             HhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        144 QGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       144 ~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      +++.-|-. .++ ||+||..=|||+. ++.+.|+|||-|-.
T Consensus       177 ~~~~~l~~~a~L-VHgDLSEyNiL~~-~~~p~iID~~QaV~  215 (268)
T COG1718         177 EYMRRLYKEAGL-VHGDLSEYNILVH-DGEPYIIDVSQAVT  215 (268)
T ss_pred             HHHHHHHHhcCc-ccccchhhheEEE-CCeEEEEECccccc
Confidence            66666665 788 9999999999999 77899999998654

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=92.13  E-value=0.12  Score=47.90  Aligned_cols=30  Identities=20%  Similarity=0.211  Sum_probs=26.0

Q ss_pred             CCCcccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        152 SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       152 ~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      .++ +|+|+.|.||++++++.+.|.||+.+.
T Consensus       175 ~~l-~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         175 RGV-IHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CcC-CccCcCcccEEEeCCceEEEeehhhhc
Confidence            356 999999999999998778899999753

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=92.08  E-value=0.096  Score=46.40  Aligned_cols=28  Identities=18%  Similarity=0.252  Sum_probs=24.7

Q ss_pred             CcccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        154 IGCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       154 iiiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      .++|+|+.|.||++++++ +.|+||+.+.
T Consensus       154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             ceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            448999999999999888 9999999864

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=91.98  E-value=0.13  Score=46.14  Aligned_cols=29  Identities=21%  Similarity=0.231  Sum_probs=25.6

Q ss_pred             CCcccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       153 ~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      .+ +|+|+.|.|||++++..+.|+||+.+.
T Consensus       164 ~l-~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         164 VV-THGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             EE-ECCCCCCccEEEeCCcEEEEEEccccc
Confidence            35 999999999999998788999999764

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=91.59  E-value=0.13  Score=45.70  Aligned_cols=29  Identities=21%  Similarity=0.432  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCeEEcC-CeEEEEecccccc
Q psy16840        153 PIGCHGNLKSSNCVVTS-RWVLQVTDFGLHE  182 (413)
Q Consensus       153 ~iiiHrdlkp~Nill~~-~~~~kl~Dfg~a~  182 (413)
                      .+ +|+|+.+.|||+++ ++.+.++||..|.
T Consensus       171 ~l-~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         171 VF-CHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EE-EcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            45 99999999999998 5789999998753

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=91.50  E-value=0.12  Score=47.88  Aligned_cols=28  Identities=25%  Similarity=0.465  Sum_probs=24.7

Q ss_pred             CCcccCCCCCCCeEEcCC----eEEEEeccccc
Q psy16840        153 PIGCHGNLKSSNCVVTSR----WVLQVTDFGLH  181 (413)
Q Consensus       153 ~iiiHrdlkp~Nill~~~----~~~kl~Dfg~a  181 (413)
                      .+ +|+|+.|.||+++.+    +.+.++||..|
T Consensus       180 ~l-cH~Dl~~~Nil~~~~~~~~~~i~lIDwEya  211 (302)
T cd05156         180 VF-CHNDLQEGNILLLNPSSETKKLVLIDFEYA  211 (302)
T ss_pred             eE-EecCCCcCeEEecCCCCCCCcEEEEeeCCC
Confidence            45 999999999999974    78999999985

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR02721 ycfN_thiK thiamine kinase

Probab=90.87  E-value=0.16  Score=45.96  Aligned_cols=27  Identities=26%  Similarity=0.326  Sum_probs=23.6

Q ss_pred             cccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        155 GCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       155 iiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      ++|+|+.|.||++++++ +.|.||..+.
T Consensus       148 l~H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       148 PLHMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             eecCCCCcCcEEEeCCC-CEEEeccccC
Confidence            39999999999999876 7899998753

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=90.59  E-value=0.11  Score=44.48  Aligned_cols=54  Identities=15%  Similarity=0.094  Sum_probs=43.0

Q ss_pred             ccchhhcccccCChhhHhhhccccCCchHHhhHhhhc---CCCcccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        115 QETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHR---SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       115 ~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~---~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      ..+|..|.+|+++..              +.+.+|+.   ..+ .-.|++|+|+-+++++.+|+.|...+-.
T Consensus        55 ~~~w~~R~~iA~~lL--------------~~l~~l~~~~~~~~-~lcDv~~~nfgv~~~~~lk~iDld~v~~  111 (188)
T PF12260_consen   55 QSPWEQRAKIALQLL--------------ELLEELDHGPLGFF-YLCDVSPDNFGVNDDGRLKLIDLDDVFV  111 (188)
T ss_pred             ccCHHHHHHHHHHHH--------------HHHHHHhcCCCCcE-EEeecchHHeEEeCCCcEEEEechhcch
Confidence            356777777777555              77888875   344 8899999999999999999999987544

Proteins in this uncharacterised family are described as transmembrane proteins.

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=90.48  E-value=0.2  Score=43.68  Aligned_cols=72  Identities=15%  Similarity=0.085  Sum_probs=47.8

Q ss_pred             HhhHhhh-cCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccc
Q psy16840        144 QGMTFLH-RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKA  222 (413)
Q Consensus       144 ~gL~yLH-~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  222 (413)
                      ++|.-.| +++-.+|||-.|+||+-|..|.+||.|-+.--.               .+..|.- +..  ..    .|+++
T Consensus       152 ~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~---------------~~V~~vN-~~Y--~~----lT~~a  209 (308)
T PF07387_consen  152 KDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVCLLE---------------NQVNMVN-IEY--ES----LTQEA  209 (308)
T ss_pred             HHHHHhhccCCCeecCCCChhheeecCCCCEEecChhhhhh---------------heeeEEe-eec--cc----cChHH
Confidence            5677888 343339999999999999999999999875211               0112322 111  11    17778


Q ss_pred             hhHHHHHHHHHHHhC
Q psy16840        223 DVYAFAVILHEIIGR  237 (413)
Q Consensus       223 Dv~slG~il~el~~g  237 (413)
                      .+-+|=.-+.++...
T Consensus       210 E~~~fv~s~l~~v~~  224 (308)
T PF07387_consen  210 EVKVFVKSCLKLVEK  224 (308)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            887777777776653

The function of this family is unknown.

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=90.23  E-value=0.22  Score=46.17  Aligned_cols=31  Identities=19%  Similarity=0.307  Sum_probs=23.9

Q ss_pred             CCcccCCCCCCCeEEcCC------------------eEEEEecccccccc
Q psy16840        153 PIGCHGNLKSSNCVVTSR------------------WVLQVTDFGLHELR  184 (413)
Q Consensus       153 ~iiiHrdlkp~Nill~~~------------------~~~kl~Dfg~a~~~  184 (413)
                      +. +|-||||.|||+-++                  -.++|.||.+|+..
T Consensus       299 nF-~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~  347 (434)
T PF05445_consen  299 NF-LHVDLKPDNILIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQVA  347 (434)
T ss_pred             ee-eecccCcCcEEEecCCCceEEEECCeEEEecccceeeecccCHHHhc
Confidence            45 999999999999321                  35788899988764

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=89.75  E-value=0.18  Score=44.13  Aligned_cols=30  Identities=20%  Similarity=0.439  Sum_probs=20.4

Q ss_pred             CcccCCCCCCCeEE-cCCeEEEEeccccccc
Q psy16840        154 IGCHGNLKSSNCVV-TSRWVLQVTDFGLHEL  183 (413)
Q Consensus       154 iiiHrdlkp~Nill-~~~~~~kl~Dfg~a~~  183 (413)
                      +.+|+||.|.|||+ +.++.++++||..|..
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            34999999999999 7788999999998643

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=89.21  E-value=0.28  Score=44.88  Aligned_cols=29  Identities=17%  Similarity=0.300  Sum_probs=23.9

Q ss_pred             cccCCCCCCCeEEcCCe-EEEEeccccccc
Q psy16840        155 GCHGNLKSSNCVVTSRW-VLQVTDFGLHEL  183 (413)
Q Consensus       155 iiHrdlkp~Nill~~~~-~~kl~Dfg~a~~  183 (413)
                      ++|+|++|.||++++++ ..-|.||+.+..
T Consensus       187 lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         187 LVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             eEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            49999999999999744 457999998643

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=89.07  E-value=0.34  Score=48.26  Aligned_cols=35  Identities=26%  Similarity=0.316  Sum_probs=30.8

Q ss_pred             hhcCCCcccCCCCCCCeEEcCCeEEEEecccccccc
Q psy16840        149 LHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR  184 (413)
Q Consensus       149 LH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~  184 (413)
                      +-..|+ .|.|..|.||+++.+|.+-+.|||+....
T Consensus       281 ~~~dgf-fHaDpHpGNi~v~~~g~i~~lDfGi~g~l  315 (517)
T COG0661         281 LLRDGF-FHADPHPGNILVRSDGRIVLLDFGIVGRL  315 (517)
T ss_pred             HHhcCc-cccCCCccceEEecCCcEEEEcCcceecC
Confidence            335788 99999999999999999999999997654

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=88.93  E-value=0.29  Score=42.31  Aligned_cols=30  Identities=23%  Similarity=0.292  Sum_probs=24.3

Q ss_pred             CcccCCCCCCCeEEcCCe-----EEEEeccccccc
Q psy16840        154 IGCHGNLKSSNCVVTSRW-----VLQVTDFGLHEL  183 (413)
Q Consensus       154 iiiHrdlkp~Nill~~~~-----~~kl~Dfg~a~~  183 (413)
                      .++|||+.+.||++..++     .+.+.||..+..
T Consensus       121 vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~  155 (196)
T smart00587      121 VLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHY  155 (196)
T ss_pred             EEeeCCCCccceeeccCCCCCccceEEEecccCCc
Confidence            349999999999998543     689999998643

subfamily of choline kinases

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=88.46  E-value=0.32  Score=45.30  Aligned_cols=28  Identities=21%  Similarity=0.361  Sum_probs=23.9

Q ss_pred             CCCcccCCCCCCCeEEcCCeEEEEeccccc
Q psy16840        152 SPIGCHGNLKSSNCVVTSRWVLQVTDFGLH  181 (413)
Q Consensus       152 ~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a  181 (413)
                      .++ +|+|+.+.||+++. +.+.|.||+.+
T Consensus       187 ~~l-iHgD~~~~Nil~~~-~~i~lIDfd~~  214 (313)
T TIGR02906       187 RGF-CHQDYAYHNILLKD-NEVYVIDFDYC  214 (313)
T ss_pred             Cce-EcCCCCcccEEEeC-CcEEEEECccc
Confidence            466 99999999999997 56789999964

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=88.37  E-value=0.3  Score=45.78  Aligned_cols=28  Identities=29%  Similarity=0.378  Sum_probs=24.7

Q ss_pred             CcccCCCCCCCeEEcCCe-EEEEecccccc
Q psy16840        154 IGCHGNLKSSNCVVTSRW-VLQVTDFGLHE  182 (413)
Q Consensus       154 iiiHrdlkp~Nill~~~~-~~kl~Dfg~a~  182 (413)
                      + ||+|+.|.||+++.+. .+.+.|||-+.
T Consensus       199 i-IH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 I-IHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             e-eecCCCccceeEcCCCCeeeEEEccccc
Confidence            6 9999999999999887 48999999753

>PHA03111 Ser/Thr kinase; Provisional

Probab=87.95  E-value=0.21  Score=46.13  Aligned_cols=32  Identities=19%  Similarity=0.309  Sum_probs=22.9

Q ss_pred             CCCcccCCCCCCCeEEcCC------------------eEEEEecccccccc
Q psy16840        152 SPIGCHGNLKSSNCVVTSR------------------WVLQVTDFGLHELR  184 (413)
Q Consensus       152 ~~iiiHrdlkp~Nill~~~------------------~~~kl~Dfg~a~~~  184 (413)
                      .+. +|-||||.|||+-++                  -.++|.||.+|+..
T Consensus       302 ~nF-~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~  351 (444)
T PHA03111        302 DNF-LHVDLKPDNILIFDSDEPISITLKDATYVFNEPIKACLNDFDFSQVA  351 (444)
T ss_pred             cee-eeccCCCCcEEEecCCCcEEEEECCeEEEeccchhhhhcccCHHHHc
Confidence            345 899999999999422                  24567788777653

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=87.85  E-value=0.39  Score=43.73  Aligned_cols=39  Identities=18%  Similarity=0.364  Sum_probs=30.4

Q ss_pred             HhhHhhhcC-CCcccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        144 QGMTFLHRS-PIGCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       144 ~gL~yLH~~-~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      .++.-.|.. -.++|+|+.|.|++.++.+.++|+||..|.
T Consensus       143 ~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg  182 (269)
T COG0510         143 RALEEVPKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAG  182 (269)
T ss_pred             HHhhhcCCCceeeecCCCCccceEEcCCCcEEEEecccCC
Confidence            444444444 344999999999999998899999998753

>PLN02236 choline kinase

Probab=87.64  E-value=0.35  Score=45.86  Aligned_cols=29  Identities=17%  Similarity=0.496  Sum_probs=24.8

Q ss_pred             CCcccCCCCCCCeEEcC-CeEEEEecccccc
Q psy16840        153 PIGCHGNLKSSNCVVTS-RWVLQVTDFGLHE  182 (413)
Q Consensus       153 ~iiiHrdlkp~Nill~~-~~~~kl~Dfg~a~  182 (413)
                      .+ +|+|+++.||++++ ++.+.++||..+.
T Consensus       201 ~~-cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        201 GF-CHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             eE-EeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            45 99999999999986 4689999998753

>COG2114 CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms]

Probab=87.42  E-value=0.46  Score=42.08  Aligned_cols=50  Identities=30%  Similarity=0.343  Sum_probs=35.6

Q ss_pred             hHHHHHHhcCCHHHHHHHhcCCCCCCCccCeEEEEeccccccccccCCCCCCcc
Q psy16840        355 KTEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLER  408 (413)
Q Consensus       355 ~~~~ll~~~lp~~va~~lk~g~~v~~e~~~~vti~fsdi~gft~~~~~~~p~~~  408 (413)
                      ..+..+...+...+..++..+.   ... ..+|++|+|++|||.++..-.|-.+
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~---~~~-~~vtilfaDi~g~T~l~~~~~~~~~   69 (227)
T COG2114          20 RSDLVLRLYLARVVGRLLARGG---AGD-RRVTLLFADIVGSTELSESLGDEAL   69 (227)
T ss_pred             hhhHHHHHHhhhccchhhcccc---ccC-ceEEEEEEeeccchHHhhhCCHHHH
Confidence            3444555556666666676655   111 8999999999999999998777544

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=85.91  E-value=0.39  Score=44.76  Aligned_cols=29  Identities=17%  Similarity=0.162  Sum_probs=25.7

Q ss_pred             CCcccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       153 ~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      ++ +|+|+.+.|+|+++++.+.++||..+.
T Consensus       197 ~l-cHgD~~~~Nvl~~~~~~~~iIDfd~~~  225 (309)
T TIGR02904       197 VL-VHGKLSLSHFLYDETRGGYFINFEKAS  225 (309)
T ss_pred             ee-eCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence            56 999999999999998889999998753

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=84.36  E-value=0.76  Score=42.74  Aligned_cols=30  Identities=23%  Similarity=0.400  Sum_probs=26.2

Q ss_pred             CcccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        154 IGCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       154 iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      .++|+|+.+.|++++...-+=|.||+++.+
T Consensus       199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~l  228 (321)
T COG3173         199 VLVHGDYRPGNLIIDPGRPTGVLDWELATL  228 (321)
T ss_pred             eeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence            349999999999999988889999998644

>KOG1093|consensus

Probab=83.08  E-value=0.15  Score=49.94  Aligned_cols=78  Identities=15%  Similarity=0.037  Sum_probs=46.7

Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCc-------ccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL-------ELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      .+|+||||+|.++.++.-|..-+......+...........+..       ..+.-.++..+..+..+|+-..|..||.+
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~  188 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLP  188 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccch
Confidence            46999999999999998876554332211111100000000000       01123466778888999999999999977


Q ss_pred             hHHHH
Q psy16840        292 PTIRA  296 (413)
Q Consensus       292 ~~i~~  296 (413)
                      .++.+
T Consensus       189 ~~~~k  193 (725)
T KOG1093|consen  189 MELSK  193 (725)
T ss_pred             hHHhc
Confidence            76643

>PRK06148 hypothetical protein; Provisional

Probab=82.93  E-value=0.88  Score=49.66  Aligned_cols=30  Identities=20%  Similarity=0.288  Sum_probs=24.6

Q ss_pred             CCCcccCCCCCCCeEEcCCe--EE-EEecccccc
Q psy16840        152 SPIGCHGNLKSSNCVVTSRW--VL-QVTDFGLHE  182 (413)
Q Consensus       152 ~~iiiHrdlkp~Nill~~~~--~~-kl~Dfg~a~  182 (413)
                      .++ ||+|+.+.|||++.+.  .+ =|+|||.+.
T Consensus       203 ~~v-IHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        203 AQV-IHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             cce-ECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            567 9999999999999774  44 499999764

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=80.83  E-value=1.1  Score=42.20  Aligned_cols=28  Identities=25%  Similarity=0.252  Sum_probs=24.1

Q ss_pred             cccCCCCCCCeEEcC-CeEEEEecccccc
Q psy16840        155 GCHGNLKSSNCVVTS-RWVLQVTDFGLHE  182 (413)
Q Consensus       155 iiHrdlkp~Nill~~-~~~~kl~Dfg~a~  182 (413)
                      .+|.||.+.|||+++ ++.++++||..|.
T Consensus       184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             EEECCCCcccEEEeCCCCcEEEEcccccC
Confidence            499999999999974 4689999999863

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	413
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-15
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		2e-14
3et6_B	190	The Crystal Structure Of The Catalytic Domain Of A		7e-13
3et6_A	190	The Crystal Structure Of The Catalytic Domain Of A		8e-13
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		6e-12
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-11
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-11
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		2e-11
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		3e-11
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		3e-11
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		3e-11
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		3e-11
4h58_A	275	Braf In Complex With Compound 3 Length = 275		3e-11
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		3e-11
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		5e-11
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		5e-11
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		5e-11
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		6e-11
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		1e-10
1fvr_A	327	Tie2 Kinase Domain Length = 327		2e-10
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		2e-10
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		5e-10
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		1e-09
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		1e-09
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-09
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		2e-09
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		2e-09
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		2e-09
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-09
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-09
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		2e-09
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		2e-09
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-09
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		2e-09
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		2e-09
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		2e-09
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		2e-09
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-09
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		2e-09
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-09
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		8e-09
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		1e-08
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		1e-08
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		1e-08
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		1e-08
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-08
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		1e-08
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		1e-08
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		1e-08
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		1e-08
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		1e-08
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		1e-08
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		2e-08
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-08
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-08
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-08
2wz1_A	219	Structure Of The Catalytic Domain Of Human Soluble		2e-08
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		2e-08
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		3e-08
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		3e-08
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		3e-08
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-08
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		3e-08
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		4e-08
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-08
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-08
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		4e-08
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-08
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		4e-08
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-08
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		4e-08
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		5e-08
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-08
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		5e-08
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		5e-08
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-08
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		5e-08
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		5e-08
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		5e-08
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		5e-08
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-08
3b2t_A	311	Structure Of Phosphotransferase Length = 311		5e-08
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		5e-08
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		5e-08
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		5e-08
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		5e-08
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		5e-08
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		5e-08
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		5e-08
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-08
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		6e-08
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		6e-08
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		6e-08
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		6e-08
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		6e-08
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		6e-08
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		7e-08
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		7e-08
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		7e-08
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		7e-08
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		7e-08
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		7e-08
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		7e-08
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		7e-08
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		7e-08
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		8e-08
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		9e-08
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		1e-07
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-07
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-07
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		1e-07
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-07
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-07
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-07
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		1e-07
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		1e-07
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		1e-07
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		1e-07
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		1e-07
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		1e-07
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-07
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-07
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-07
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-07
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		1e-07
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-07
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		1e-07
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		1e-07
3a4o_X	286	Lyn Kinase Domain Length = 286		1e-07
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		2e-07
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-07
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-07
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-07
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-07
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-07
1yk9_A	204	Crystal Structure Of A Mutant Form Of The Mycobacte		2e-07
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		2e-07
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		2e-07
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-07
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		2e-07
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-07
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		2e-07
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		2e-07
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		2e-07
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		3e-07
1ab8_A	220	Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COM		3e-07
3uvj_B	220	Crystal Structure Of The Catalytic Domain Of The He		3e-07
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		3e-07
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		3e-07
1cul_B	208	Complex Of Gs-Alpha With The Catalytic Domains Of M		3e-07
1azs_B	212	Complex Of Gs-Alpha With The Catalytic Domains Of M		3e-07
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-07
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		4e-07
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-07
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		5e-07
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		5e-07
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		5e-07
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-07
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		5e-07
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		5e-07
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-07
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		6e-07
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-07
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-07
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-07
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		6e-07
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		7e-07
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		7e-07
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		7e-07
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		8e-07
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		8e-07
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		8e-07
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		1e-06
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		1e-06
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		1e-06
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		1e-06
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		1e-06
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		1e-06
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		2e-06
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		2e-06
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		2e-06
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		2e-06
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-06
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		2e-06
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-06
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		2e-06
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		2e-06
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		2e-06
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-06
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-06
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		2e-06
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		2e-06
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		2e-06
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		3e-06
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		3e-06
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		3e-06
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		3e-06
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		3e-06
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		3e-06
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		3e-06
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		3e-06
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		3e-06
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		3e-06
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		3e-06
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		3e-06
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		3e-06
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		3e-06
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-06
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		4e-06
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		4e-06
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		4e-06
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		4e-06
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		4e-06
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		4e-06
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		4e-06
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		4e-06
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		4e-06
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		4e-06
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		4e-06
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		4e-06
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		4e-06
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		4e-06
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-06
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		5e-06
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		5e-06
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		5e-06
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		5e-06
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		5e-06
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		5e-06
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		5e-06
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		5e-06
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		6e-06
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		6e-06
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		6e-06
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		6e-06
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		7e-06
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		7e-06
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		8e-06
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		8e-06
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		1e-05
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		1e-05
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		1e-05
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		1e-05
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		1e-05
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		1e-05
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		1e-05
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		1e-05
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		1e-05
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		1e-05
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-05
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		2e-05
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-05
4fl2_A	636	Structural And Biophysical Characterization Of The		2e-05
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-05
4fl3_A	635	Structural And Biophysical Characterization Of The		2e-05
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		3e-05
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		3e-05
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		4e-05
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		4e-05
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		4e-05
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		4e-05
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		4e-05
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		5e-05
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		5e-05
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		5e-05
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		5e-05
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		5e-05
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		5e-05
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		5e-05
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-05
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-05
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		5e-05
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-05
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		5e-05
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		5e-05
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		5e-05
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		5e-05
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		5e-05
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		5e-05
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		5e-05
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-05
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		6e-05
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		6e-05
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		6e-05
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		6e-05
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		6e-05
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		6e-05
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		6e-05
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		6e-05
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		6e-05
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-05
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		6e-05
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		7e-05
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		7e-05
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		7e-05
3uvj_A	225	Crystal Structure Of The Catalytic Domain Of The He		8e-05
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		1e-04
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		1e-04
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		1e-04
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-04
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		2e-04
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		2e-04
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		2e-04
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-04
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-04
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		2e-04
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		2e-04
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		2e-04
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		3e-04
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		3e-04
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		3e-04
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		3e-04
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		3e-04
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		3e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		3e-04
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		3e-04
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		3e-04
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		3e-04
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		3e-04
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		4e-04
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		4e-04
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		4e-04
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		4e-04
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		4e-04
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		4e-04
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		4e-04
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		5e-04
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		6e-04
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		6e-04
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		6e-04
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		6e-04
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		6e-04
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		6e-04
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		7e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		7e-04
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		7e-04
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		7e-04
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		7e-04
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		8e-04
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		8e-04

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 23/165 (13%)
Query: 144 QGMTFLH-RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR---HCAENDSIGEHQYYR 199
           +GM +LH R+P   H NLKS N +V  ++ ++V DFGL  L+     +   + G  +   
Sbjct: 148 KGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPE--- 204
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG---LYEPKGEDCEE 256
              W APE+LRD  +     +K+DVY+F VIL E+   + P+G      +    G  C+ 
Sbjct: 205 ---WMAPEVLRDEPS----NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                LE+ R+   P V A +  CW   P  RP F TI   L+ +
Sbjct: 258 -----LEIPRN-LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 144 QGMTFLH-RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           +GM +LH R+P   H +LKS N +V  ++ ++V DFGL  L+    +  +       +  
Sbjct: 148 KGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK---ASXFLXSKXAAGTPE 204
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG---LYEPKGEDCEEPFR 259
           W APE+LRD  +     +K+DVY+F VIL E+   + P+G      +    G  C+    
Sbjct: 205 WMAPEVLRDEPS----NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR--- 257
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
             LE+ R+   P V A +  CW   P  RP F TI   L+ +
Sbjct: 258 --LEIPRN-LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296

>pdb|3ET6|B Chain B, The Crystal Structure Of The Catalytic Domain Of A Eukaryotic Guanylate Cyclase Length = 190

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 43/63 (68%)
Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLT 60
           MPR+ LFGDTVNTASRMES GE  +IHIS AC   L     + + ERG + +KGKG + T
Sbjct: 122 MPRFXLFGDTVNTASRMESHGEAGQIHISEACYXCLRSKERFEIRERGNITVKGKGTMRT 181
Query: 61  YWL 63
           Y L
Sbjct: 182 YLL 184

>pdb|3ET6|A Chain A, The Crystal Structure Of The Catalytic Domain Of A Eukaryotic Guanylate Cyclase Length = 190

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 43/63 (68%)
Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLT 60
           MPR+ LFGDTVNTASRMES GE  +IHIS AC   L     + + ERG + +KGKG + T
Sbjct: 122 MPRFXLFGDTVNTASRMESHGEAGQIHISEACYCCLRSKERFEIRERGNITVKGKGTMRT 181
Query: 61  YWL 63
           Y L
Sbjct: 182 YLL 184

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 141 IPRQ---GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
           I RQ   GM +LH   I  H +LKS+N  +     +++ DFGL  ++        G HQ+
Sbjct: 113 IARQTARGMDYLHAKSI-IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWS----GSHQF 167
Query: 198 YR---SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG----LYEPK 250
            +   S+LW APE++R   +     Q +DVYAF ++L+E++  + P+        + E  
Sbjct: 168 EQLSGSILWMAPEVIRMQDSNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
Query: 251 GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           G        P+L  +R +C   +   M +C  +  + RP FP I A ++ +
Sbjct: 227 GRGS---LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 141 IPRQ---GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
           I RQ   GM +LH   I  H +LKS+N  +     +++ DFGL       ++   G HQ+
Sbjct: 125 IARQTARGMDYLHAKSI-IHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQF 179
Query: 198 YR---SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG----LYEPK 250
            +   S+LW APE++R   +     Q +DVYAF ++L+E++  + P+        + E  
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
Query: 251 GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           G        P+L  +R +C   +   M +C  +  + RP FP I A ++ +
Sbjct: 239 GRGS---LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 141 IPRQ---GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
           I RQ   GM +LH   I  H +LKS+N  +     +++ DFGL       ++   G HQ+
Sbjct: 125 IARQTARGMDYLHAKSI-IHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQF 179
Query: 198 YR---SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG----LYEPK 250
            +   S+LW APE++R   +     Q +DVYAF ++L+E++  + P+        + E  
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
Query: 251 GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           G        P+L  +R +C   +   M +C  +  + RP FP I A ++ +
Sbjct: 239 GRGS---LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
           QGM +LH   I  H +LKS+N  +     +++ DFGL  ++        G HQ+ +   S
Sbjct: 142 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS----GSHQFEQLSGS 196
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
           +LW APE++R         Q +DVYAF ++L+E++  + P+      +         +  
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 255
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           P+L  +R +C   +   M +C  +  + RP FP I A ++
Sbjct: 256 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 295

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
           QGM +LH   I  H +LKS+N  +     +++ DFGL  ++        G HQ+ +   S
Sbjct: 143 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS----GSHQFEQLSGS 197
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
           +LW APE++R         Q +DVYAF ++L+E++  + P+      +         +  
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 256
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           P+L  +R +C   +   M +C  +  + RP FP I A ++
Sbjct: 257 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
           QGM +LH   I  H +LKS+N  +     +++ DFGL  ++        G HQ+ +   S
Sbjct: 120 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS----GSHQFEQLSGS 174
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
           +LW APE++R         Q +DVYAF ++L+E++  + P+      +         +  
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 233
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           P+L  +R +C   +   M +C  +  + RP FP I A ++
Sbjct: 234 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
           QGM +LH   I  H +LKS+N  +     +++ DFGL  ++        G HQ+ +   S
Sbjct: 120 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS----GSHQFEQLSGS 174
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
           +LW APE++R         Q +DVYAF ++L+E++  + P+      +         +  
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 233
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           P+L  +R +C   +   M +C  +  + RP FP I A ++
Sbjct: 234 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
           QGM +LH   I  H +LKS+N  +     +++ DFGL  ++        G HQ+ +   S
Sbjct: 117 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS----GSHQFEQLSGS 171
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
           +LW APE++R         Q +DVYAF ++L+E++  + P+      +         +  
Sbjct: 172 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 230
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           P+L  +R +C   +   M +C  +  + RP FP I A ++
Sbjct: 231 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 270

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
           QGM +LH   I  H +LKS+N  +     +++ DFGL  ++        G HQ+ +   S
Sbjct: 115 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS----GSHQFEQLSGS 169
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
           +LW APE++R         Q +DVYAF ++L+E++  + P+      +         +  
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 228
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           P+L  +R +C   +   M +C  +  + RP FP I A ++
Sbjct: 229 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
           QGM +LH   I  H +LKS+N  +     +++ DFGL  ++        G HQ+ +   S
Sbjct: 115 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS----GSHQFEQLSGS 169
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
           +LW APE++R         Q +DVYAF ++L+E++  + P+      +         +  
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 228
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           P+L  +R +C   +   M +C  +  + RP FP I A ++
Sbjct: 229 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L++F   + R GM +L +     H NL + N +V   +V ++ DFGL   +      ++G
Sbjct: 141 LLHFAADVAR-GMDYLSQKQF-IHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 198
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGG--CG-LYE- 248
                  + W A E L  +      T  +DV+++ V+L EI+   G P+ G  C  LYE 
Sbjct: 199 R----LPVRWMAIESLNYSVY----TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 250
Query: 249 -PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQK 307
            P+G   E+P          +C+  V   MR CW E P  RP F  I   L  M + ++ 
Sbjct: 251 LPQGYRLEKPL---------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 301
Query: 308 NIIDQMME 315
            +   + E
Sbjct: 302 YVNTTLYE 309

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
           QGM +LH   I  H +LKS+N  +     +++ DFGL       ++   G HQ+ +   S
Sbjct: 143 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGS 197
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
           +LW APE++R         Q +DVYAF ++L+E++  + P+      +         +  
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 256
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           P+L  +R +C   +   M +C  +  + RP FP I A ++
Sbjct: 257 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
           QGM +LH   I  H +LKS+N  +     +++ DFGL       ++   G HQ+ +   S
Sbjct: 135 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGS 189
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
           +LW APE++R         Q +DVYAF ++L+E++  + P+      +         +  
Sbjct: 190 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 248
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           P+L  +R +C   +   M +C  +  + RP FP I A ++
Sbjct: 249 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 288

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
           QGM +LH   I  H +LKS+N  +     +++ DFGL       ++   G HQ+ +   S
Sbjct: 115 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGS 169
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
           +LW APE++R         Q +DVYAF ++L+E++  + P+      +         +  
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 228
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           P+L  +R +C   +   M +C  +  + RP FP I A ++
Sbjct: 229 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 29/178 (16%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIG--CHGNLKSSNCVVT--------SRWVLQVTDFGL-HE 182
           L+N+   I R GM +LH   I    H +LKSSN ++         S  +L++TDFGL  E
Sbjct: 107 LVNWAVQIAR-GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 165
Query: 183 LRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFG 242
                +  + G +       W APE++R +      ++ +DV+++ V+L E++    PF 
Sbjct: 166 WHRTTKMSAAGAYA------WMAPEVIRASMF----SKGSDVWSYGVLLWELLTGEVPFR 215
Query: 243 GC-GLYEPKGEDCEEPFRPNLELLRDSC-EPFVLACMRDCWAEAPESRPDFPTIRARL 298
           G  GL    G    +   P    +  +C EPF    M DCW   P SRP F  I  +L
Sbjct: 216 GIDGLAVAYGVAMNKLALP----IPSTCPEPFA-KLMEDCWNPDPHSRPSFTNILDQL 268

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L++F   + R GM +L +     H +L + N +V   +V ++ DFGL   +      ++G
Sbjct: 144 LLHFAADVAR-GMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 201
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGG--CG-LYE- 248
                  + W A E L  +      T  +DV+++ V+L EI+   G P+ G  C  LYE 
Sbjct: 202 R----LPVRWMAIESLNYSVY----TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 253
Query: 249 -PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQK 307
            P+G   E+P          +C+  V   MR CW E P  RP F  I   L  M + ++ 
Sbjct: 254 LPQGYRLEKPL---------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304
Query: 308 NIIDQMME 315
            +   + E
Sbjct: 305 YVNTTLYE 312

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L++F   + R GM +L +     H +L + N +V   +V ++ DFGL   +      ++G
Sbjct: 134 LLHFAADVAR-GMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 191
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGG--CG-LYE- 248
                  + W A E L  +      T  +DV+++ V+L EI+   G P+ G  C  LYE 
Sbjct: 192 R----LPVRWMAIESLNYSVY----TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 243
Query: 249 -PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQK 307
            P+G   E+P          +C+  V   MR CW E P  RP F  I   L  M + ++ 
Sbjct: 244 LPQGYRLEKPL---------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 294
Query: 308 NIIDQMME 315
            +   + E
Sbjct: 295 YVNTTLYE 302

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+       H NL+++N +V+     ++ DFGL  L    +N+          + W
Sbjct: 116 EGMAFIEERNY-IHRNLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKW 172
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
            APE +      I    K+DV++F ++L EI+   R P+ G  +  P+  ++ E  +R  
Sbjct: 173 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 224
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             ++R D+C   +   MR CW E PE RP F  +R+ L+
Sbjct: 225 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 32/165 (19%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +G  F+HR       +L + N +V+   V +V+DFGL   +  +     G+      + W
Sbjct: 119 EGNNFVHR-------DLAARNVLVSEDNVAKVSDFGL--TKEASSTQDTGK----LPVKW 165
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEI--IGR----RGPFGGCGLYEPKGEDCEEP 257
            APE LR+     + + K+DV++F ++L EI   GR    R P         KG   + P
Sbjct: 166 TAPEALREK----KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 221
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
                    D C P V   M++CW      RP F  +R +L+H+K
Sbjct: 222 ---------DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 257

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 32/165 (19%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +G  F+HR       +L + N +V+   V +V+DFGL   +  +     G+      + W
Sbjct: 134 EGNNFVHR-------DLAARNVLVSEDNVAKVSDFGL--TKEASSTQDTGK----LPVKW 180
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEI--IGR----RGPFGGCGLYEPKGEDCEEP 257
            APE LR+     + + K+DV++F ++L EI   GR    R P         KG   + P
Sbjct: 181 TAPEALREK----KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 236
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
                    D C P V   M++CW      RP F  +R +L+H+K
Sbjct: 237 ---------DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 69/165 (41%), Gaps = 24/165 (14%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLL 202
             M +L +     H +L + NC+V    V++V DFGL  L      D+   H   +  + 
Sbjct: 141 SAMEYLEKKNF-IHRDLAARNCLVGENHVVKVADFGLSRL---MTGDTYTAHAGAKFPIK 196
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEE 256
           W APE L      I    K+DV+AF V+L EI      P+ G  L +      KG   E+
Sbjct: 197 WTAPESLAYNTFSI----KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQ 252
Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           P         + C P V   MR CW  +P  RP F       + M
Sbjct: 253 P---------EGCPPKVYELMRACWKWSPADRPSFAETHQAFETM 288

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 32/165 (19%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +G  F+HR       +L + N +V+   V +V+DFGL   +  +     G+      + W
Sbjct: 306 EGNNFVHR-------DLAARNVLVSEDNVAKVSDFGL--TKEASSTQDTGK----LPVKW 352
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEI--IGR----RGPFGGCGLYEPKGEDCEEP 257
            APE LR+     + + K+DV++F ++L EI   GR    R P         KG   + P
Sbjct: 353 TAPEALREK----KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 408
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
                    D C P V   M++CW     +RP F  +R +L+H++
Sbjct: 409 ---------DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+       H +L+++N +V+     ++ DFGL  L    +N+          + W
Sbjct: 128 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKW 184
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
            APE +      I    K+DV++F ++L EI+   R P+   G+  P+  ++ E  +R  
Sbjct: 185 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQNLERGYR-- 236
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             ++R D+C   +   MR CW E PE RP F  +R+ L+
Sbjct: 237 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+       H +L+++N +V+     ++ DFGL  L    +N+          + W
Sbjct: 115 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKW 171
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
            APE +      I    K+DV++F ++L EI+   R P+ G  +  P+  ++ E  +R  
Sbjct: 172 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 223
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             ++R D+C   +   MR CW E PE RP F  +R+ L+
Sbjct: 224 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+       H +L+++N +V+     ++ DFGL  L   AE  +    ++   + W
Sbjct: 120 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF--PIKW 176
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
            APE +      I    K+DV++F ++L EI+   R P+ G  +  P+  ++ E  +R  
Sbjct: 177 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 228
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             ++R D+C   +   MR CW E PE RP F  +R+ L+
Sbjct: 229 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+       H +L+++N +V+     ++ DFGL  L    +N+          + W
Sbjct: 126 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKW 182
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
            APE +      I    K+DV++F ++L EI+   R P+ G  +  P+  ++ E  +R  
Sbjct: 183 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 234
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             ++R D+C   +   MR CW E PE RP F  +R+ L+
Sbjct: 235 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+       H +L+++N +V+     ++ DFGL  L    +N+          + W
Sbjct: 121 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKW 177
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
            APE +      I    K+DV++F ++L EI+   R P+ G  +  P+  ++ E  +R  
Sbjct: 178 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 229
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             ++R D+C   +   MR CW E PE RP F  +R+ L+
Sbjct: 230 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+       H +L+++N +V+     ++ DFGL  L    +N+          + W
Sbjct: 122 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKW 178
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
            APE +      I    K+DV++F ++L EI+   R P+ G  +  P+  ++ E  +R  
Sbjct: 179 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 230
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             ++R D+C   +   MR CW E PE RP F  +R+ L+
Sbjct: 231 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+       H +L+++N +V+     ++ DFGL  L    +N+          + W
Sbjct: 120 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKW 176
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
            APE +      I    K+DV++F ++L EI+   R P+   G+  P+  ++ E  +R  
Sbjct: 177 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQNLERGYR-- 228
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             ++R D+C   +   MR CW E PE RP F  +R+ L+
Sbjct: 229 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 32/165 (19%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +G  F+HR       +L + N +V+   V +V+DFGL   +  +     G+      + W
Sbjct: 125 EGNNFVHR-------DLAARNVLVSEDNVAKVSDFGL--TKEASSTQDTGK----LPVKW 171
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEI--IGR----RGPFGGCGLYEPKGEDCEEP 257
            APE LR+       + K+DV++F ++L EI   GR    R P         KG   + P
Sbjct: 172 TAPEALREAAF----STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 227
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
                    D C P V   M++CW      RP F  +R +L+H+K
Sbjct: 228 ---------DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 263

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+       H +L+++N +V+     ++ DFGL  L    +N+          + W
Sbjct: 120 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKW 176
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
            APE +      I    K+DV++F ++L EI+   R P+ G  +  P+  ++ E  +R  
Sbjct: 177 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 228
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             ++R D+C   +   MR CW E PE RP F  +R+ L+
Sbjct: 229 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+       H +L+++N +V+     ++ DFGL  L    +N+          + W
Sbjct: 126 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKW 182
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
            APE +      I    K+DV++F ++L EI+   R P+ G  +  P+  ++ E  +R  
Sbjct: 183 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 234
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             ++R D+C   +   MR CW E PE RP F  +R+ L+
Sbjct: 235 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+       H +L+++N +V+     ++ DFGL  L    +N+          + W
Sbjct: 125 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKW 181
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
            APE +      I    K+DV++F ++L EI+   R P+ G  +  P+  ++ E  +R  
Sbjct: 182 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 233
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             ++R D+C   +   MR CW E PE RP F  +R+ L+
Sbjct: 234 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+       H +L+++N +V+     ++ DFGL  L    +N+          + W
Sbjct: 129 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKW 185
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
            APE +      I    K+DV++F ++L EI+   R P+ G  +  P+  ++ E  +R  
Sbjct: 186 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 237
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             ++R D+C   +   MR CW E PE RP F  +R+ L+
Sbjct: 238 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+       H +L+++N +V+     ++ DFGL  L    +N+          + W
Sbjct: 120 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKW 176
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
            APE +      I    K+DV++F ++L EI+   R P+ G  +  P+  ++ E  +R  
Sbjct: 177 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 228
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             ++R D+C   +   MR CW E PE RP F  +R+ L+
Sbjct: 229 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+       H +L+++N +V+     ++ DFGL  L    +N+          + W
Sbjct: 130 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKW 186
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
            APE +      I    K+DV++F ++L EI+   R P+   G+  P+  ++ E  +R  
Sbjct: 187 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQNLERGYR-- 238
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
             ++R D+C   +   MR CW E PE RP F  +R+ L+
Sbjct: 239 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+ +    H +L + NC V   + +++ DFG+           I E  YYR     
Sbjct: 137 GMAYLNANKF-VHRDLAARNCXVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 187
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
              + W +PE L+D       T  +DV++F V+L EI      P+ G           E+
Sbjct: 188 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 235
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
             R  +E  LL   D+C   +L  MR CW   P+ RP F  I + +K 
Sbjct: 236 VLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 283

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+ +    H +L + NC+V   + +++ DFG+           I E  YYR     
Sbjct: 143 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGMTR--------DIYETDYYRKGGKG 193
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
              + W +PE L+D       T  +DV++F V+L EI      P+ G           E+
Sbjct: 194 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 241
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
             R  +E  LL   D+C   +   MR CW   P+ RP F  I + +K 
Sbjct: 242 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+ +    H +L + NC+V   + +++ DFG+           I E  YYR     
Sbjct: 143 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 193
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
              + W +PE L+D       T  +DV++F V+L EI      P+ G           E+
Sbjct: 194 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 241
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
             R  +E  LL   D+C   +   MR CW   P+ RP F  I + +K 
Sbjct: 242 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+ +    H +L + NC+V   + +++ DFG+           I E  YYR     
Sbjct: 172 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 222
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
              + W +PE L+D       T  +DV++F V+L EI      P+ G           E+
Sbjct: 223 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 270
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
             R  +E  LL   D+C   +   MR CW   P+ RP F  I + +K 
Sbjct: 271 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 318

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H NL + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 369 AMEYLEKKNF-IHRNLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 424
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 425 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 475
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQ 320
            + R + C   V   MR CW   P  RP F  I    + M   ++ +I D++ + + K+
Sbjct: 476 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSISDEVEKELGKE 532

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+ +    H +L + NC+V   + +++ DFG+           I E  YYR     
Sbjct: 141 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 191
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
              + W +PE L+D       T  +DV++F V+L EI      P+ G           E+
Sbjct: 192 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 239
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
             R  +E  LL   D+C   +   MR CW   P+ RP F  I + +K 
Sbjct: 240 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 287

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+ +    H +L + NC+V   + +++ DFG+           I E  YYR     
Sbjct: 150 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 200
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
              + W +PE L+D       T  +DV++F V+L EI      P+ G           E+
Sbjct: 201 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 248
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
             R  +E  LL   D+C   +   MR CW   P+ RP F  I + +K 
Sbjct: 249 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+ +    H +L + NC+V   + +++ DFG+           I E  YYR     
Sbjct: 140 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 190
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
              + W +PE L+D       T  +DV++F V+L EI      P+        +G   E+
Sbjct: 191 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQ 238
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
             R  +E  LL   D+C   +   MR CW   P+ RP F  I + +K 
Sbjct: 239 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 286

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+ +    H +L + NC+V   + +++ DFG+           I E  YYR     
Sbjct: 144 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 194
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
              + W +PE L+D       T  +DV++F V+L EI      P+ G           E+
Sbjct: 195 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 242
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
             R  +E  LL   D+C   +   MR CW   P+ RP F  I + +K 
Sbjct: 243 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+ +    H +L + NC+V   + +++ DFG+           I E  YYR     
Sbjct: 137 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 187
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
              + W +PE L+D       T  +DV++F V+L EI      P+        +G   E+
Sbjct: 188 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQ 235
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
             R  +E  LL   D+C   +   MR CW   P+ RP F  I + +K 
Sbjct: 236 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 283

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           QGM +LH   I  H ++KS+N  +     +++ DFGL  ++         E Q   S+LW
Sbjct: 143 QGMDYLHAKNI-IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE-QPTGSVLW 200
Query: 204 KAPELLR-DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-RPN 261
            APE++R   + P   + ++DVY++ ++L+E++    P+      +         +  P+
Sbjct: 201 MAPEVIRMQDNNPF--SFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD 258
Query: 262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           L  L  +C   +   + DC  +  E RP FP I + ++ ++
Sbjct: 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+ +    H +L + NC+V   + +++ DFG+           I E  YYR     
Sbjct: 150 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 200
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
              + W +PE L+D       T  +DV++F V+L EI      P+ G           E+
Sbjct: 201 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 248
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
             R  +E  LL   D+C   +   MR CW   P+ RP F  I + +K 
Sbjct: 249 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H NL + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 330 AMEYLEKKNF-IHRNLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 385
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 386 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 436
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQ 320
            + R + C   V   MR CW   P  RP F  I    + M   ++ +I D++ + + K+
Sbjct: 437 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSISDEVEKELGKR 493

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 27/163 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
           G+ F+HR       +L + NC+V    V+++ DFG+    +  +   +G     R++L  
Sbjct: 176 GLHFVHR-------DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG----RTMLPI 224
Query: 203 -WKAPE--LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR 259
            W  PE  L R      + T ++DV++F V+L EI      +G    Y+    +  +   
Sbjct: 225 RWMPPESILYR------KFTTESDVWSFGVVLWEIF----TYGKQPWYQLSNTEAIDCIT 274
Query: 260 PNLELLRD-SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
              EL R  +C P V A MR CW   P+ R     + ARL+ +
Sbjct: 275 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 128 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 183
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 184 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 234
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQ 320
            + R + C   V   MR CW   P  RP F  I    + M   ++ +I D++ + + KQ
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSISDEVEKELGKQ 291

>pdb|2WZ1|A Chain A, Structure Of The Catalytic Domain Of Human Soluble Guanylate Cyclase 1 Beta 3. Length = 219

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAAL----DKLGGYIVEERGVVCMKGKG 56
           MPRYCLFG+TVN  SR E+TGE  +I++S      L    +    + +E RG V MKGK 
Sbjct: 130 MPRYCLFGNTVNLTSRTETTGEKGKINVSEYTYRCLMSPENSDPQFHLEHRGPVSMKGKK 189
Query: 57  EVLTYWLV 64
           E +  W +
Sbjct: 190 EPMQVWFL 197

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 27/163 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
           G+ F+HR       +L + NC+V    V+++ DFG+    +  +   +G     R++L  
Sbjct: 153 GLHFVHR-------DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG----RTMLPI 201
Query: 203 -WKAPE--LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR 259
            W  PE  L R      + T ++DV++F V+L EI      +G    Y+    +  +   
Sbjct: 202 RWMPPESILYR------KFTTESDVWSFGVVLWEIF----TYGKQPWYQLSNTEAIDCIT 251
Query: 260 PNLELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
              EL R  +C P V A MR CW   P+ R     + ARL+ +
Sbjct: 252 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 294

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 27/163 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
           G+ F+HR       +L + NC+V    V+++ DFG+    +  +   +G     R++L  
Sbjct: 147 GLHFVHR-------DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG----RTMLPI 195
Query: 203 -WKAPE--LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR 259
            W  PE  L R      + T ++DV++F V+L EI      +G    Y+    +  +   
Sbjct: 196 RWMPPESILYR------KFTTESDVWSFGVVLWEIF----TYGKQPWYQLSNTEAIDCIT 245
Query: 260 PNLELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
              EL R  +C P V A MR CW   P+ R     + ARL+ +
Sbjct: 246 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 288

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
           GM +L+ +    H +L + NC+V   + +++ DFG+   R   E D     +  + LL  
Sbjct: 135 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGMT--RDIXETDX--XRKGGKGLLPV 189
Query: 203 -WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRP 260
            W +PE L+D       T  +DV++F V+L EI      P+ G           E+  R 
Sbjct: 190 RWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQVLRF 237
Query: 261 NLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
            +E  LL   D+C   +L  MR CW   P+ RP F  I + +K 
Sbjct: 238 VMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 281

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 35/199 (17%)
Query: 111 AHRPQETLKLRIGIHSDIII-ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS 169
           AH  + ++KLR+ +  DI + I Y+ N              ++P   H +L+S N  + S
Sbjct: 116 AHPIKWSVKLRLML--DIALGIEYMQN--------------QNPPIVHRDLRSPNIFLQS 159
Query: 170 R-----WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADV 224
                    +V DFGL +    + +  +G  Q      W APE +         T+KAD 
Sbjct: 160 LDENAPVCAKVADFGLSQQSVHSVSGLLGNFQ------WMAPETIGAEEESY--TEKADT 211
Query: 225 YAFAVILHEIIGRRGPFGGCGLYEPKGEDC--EEPFRPNLELLRDSCEPFVLACMRDCWA 282
           Y+FA+IL+ I+   GPF      + K  +   EE  RP +    + C P +   +  CW+
Sbjct: 212 YSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP---EDCPPRLRNVIELCWS 268
Query: 283 EAPESRPDFPTIRARLKHM 301
             P+ RP F  I   L  +
Sbjct: 269 GDPKKRPHFSYIVKELSEL 287

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
           ++ I   P+E +  +     D++  TY +        +GM +L  S    H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
           VT   V+++ DFGL           I    YY++       + W APE L D       T
Sbjct: 190 VTENNVMKIADFGLAR--------DINNIDYYKNTTNGRLPVKWMAPEALFDRVY----T 237
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
            ++DV++F V++ EI    G P+ G  + E      +G   ++P          +C   +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 288
Query: 274 LACMRDCWAEAPESRPDF 291
              MRDCW   P  RP F
Sbjct: 289 YMMMRDCWHAVPSQRPTF 306

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 35/177 (19%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L++F   I  +GM F+ +     H +L+++N +V++  V ++ DFGL   R   +N+   
Sbjct: 113 LIDFSAQIA-EGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLA--RVIEDNEYTA 168
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGC-------- 244
                  + W APE +      I    K+DV++F ++L EI+   R P+ G         
Sbjct: 169 REGAKFPIKWTAPEAINFGSFTI----KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 224
Query: 245 ---GLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
              G   P+ E+C E                +   M  CW   PE RP F  I++ L
Sbjct: 225 LERGYRMPRPENCPEE---------------LYNIMMRCWKNRPEERPTFEYIQSVL 266

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 35/177 (19%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L++F   I  +GM F+ +     H +L+++N +V++  V ++ DFGL   R   +N+   
Sbjct: 286 LIDFSAQIA-EGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGL--ARVIEDNEYTA 341
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGC-------- 244
                  + W APE +      I    K+DV++F ++L EI+   R P+ G         
Sbjct: 342 REGAKFPIKWTAPEAINFGSFTI----KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 397
Query: 245 ---GLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
              G   P+ E+C E                +   M  CW   PE RP F  I++ L
Sbjct: 398 LERGYRMPRPENCPEE---------------LYNIMMRCWKNRPEERPTFEYIQSVL 439

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
           ++ I   P+E +  +     D++  TY +        +GM +L  S    H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
           VT   V+++ DFGL           I    YY+        + W APE L D       T
Sbjct: 190 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 237
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
            ++DV++F V++ EI    G P+ G  + E      +G   ++P          +C   +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 288
Query: 274 LACMRDCWAEAPESRPDF 291
              MRDCW   P  RP F
Sbjct: 289 YMMMRDCWHAVPSQRPTF 306

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
           ++ I   P+E +  +     D++  TY +        +GM +L  S    H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
           VT   V+++ DFGL           I    YY+        + W APE L D       T
Sbjct: 190 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 237
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
            ++DV++F V++ EI    G P+ G  + E      +G   ++P          +C   +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 288
Query: 274 LACMRDCWAEAPESRPDF 291
              MRDCW   P  RP F
Sbjct: 289 YMMMRDCWHAVPSQRPTF 306

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 34/171 (19%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L++FG  + R GM +L       H +L + NC++   + ++V DFGL       E  S+ 
Sbjct: 126 LISFGLQVAR-GMEYLAEQKF-VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------------ 240
           +H++ R  + W A E L+      R T K+DV++F V+L E++ R  P            
Sbjct: 184 QHRHARLPVKWTALESLQT----YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTH 239
Query: 241 FGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF 291
           F   G   P+ E C +                +   M+ CW   P  RP F
Sbjct: 240 FLAQGRRLPQPEYCPDS---------------LYQVMQQCWEADPAVRPTF 275

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
           ++ I   P+E +  +     D++  TY +        +GM +L  S    H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
           VT   V+++ DFGL           I    YY+        + W APE L D       T
Sbjct: 190 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 237
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
            ++DV++F V++ EI    G P+ G  + E      +G   ++P          +C   +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 288
Query: 274 LACMRDCWAEAPESRPDF 291
              MRDCW   P  RP F
Sbjct: 289 YMMMRDCWHAVPSQRPTF 306

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
           ++ I   P+E +  +     D++  TY +        +GM +L  S    H +L + N +
Sbjct: 189 SYDINRVPEEQMTFK-----DLVSCTYQLA-------RGMEYLA-SQKCIHRDLAARNVL 235
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
           VT   V+++ DFGL           I    YY+        + W APE L D       T
Sbjct: 236 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 283
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
            ++DV++F V++ EI    G P+ G  + E      +G   ++P          +C   +
Sbjct: 284 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 334
Query: 274 LACMRDCWAEAPESRPDF 291
              MRDCW   P  RP F
Sbjct: 335 YMMMRDCWHAVPSQRPTF 352

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
           ++ I   P+E +  +     D++  TY +        +GM +L  S    H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
           VT   V+++ DFGL           I    YY+        + W APE L D       T
Sbjct: 190 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 237
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
            ++DV++F V++ EI    G P+ G  + E      +G   ++P          +C   +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 288
Query: 274 LACMRDCWAEAPESRPDF 291
              MRDCW   P  RP F
Sbjct: 289 YMMMRDCWHAVPSQRPTF 306

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
           +H P+E L  +     D++   Y +        +GM +L  S    H +L + N +VT  
Sbjct: 181 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 227
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
            V+++ DFGL    H  +        YY+        + W APE L D       T ++D
Sbjct: 228 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 275
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
           V++F V+L EI    G P+ G  + E      +G   ++P          +C   +   M
Sbjct: 276 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 326
Query: 278 RDCWAEAPESRPDF 291
           RDCW   P  RP F
Sbjct: 327 RDCWHAVPSQRPTF 340

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
           +H P+E L  +     D++   Y +        +GM +L  S    H +L + N +VT  
Sbjct: 140 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 186
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
            V+++ DFGL    H  +        YY+        + W APE L D       T ++D
Sbjct: 187 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 234
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
           V++F V+L EI    G P+ G  + E      +G   ++P          +C   +   M
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 285
Query: 278 RDCWAEAPESRPDF 291
           RDCW   P  RP F
Sbjct: 286 RDCWHAVPSQRPTF 299

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
           ++ I   P+E +  +     D++  TY +        +GM +L  S    H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
           VT   V+++ DFGL           I    YY+        + W APE L D       T
Sbjct: 190 VTENNVMRIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 237
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
            ++DV++F V++ EI    G P+ G  + E      +G   ++P          +C   +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 288
Query: 274 LACMRDCWAEAPESRPDF 291
              MRDCW   P  RP F
Sbjct: 289 YMMMRDCWHAVPSQRPTF 306

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 16/178 (8%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
            M +L +     H +L + NC+V    +++V DFGL  L       +    ++   + W 
Sbjct: 124 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF--PIKWT 180
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNLE 263
           APE L      I    K+DV+AF V+L EI      P+ G  L         E    +  
Sbjct: 181 APESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDYR 231
Query: 264 LLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQ 320
           + R + C   V   MR CW   P  RP F  I    + M   ++ +I D++ + + KQ
Sbjct: 232 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSISDEVEKELGKQ 287

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 69/168 (41%), Gaps = 35/168 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+      H NL + NC+V   + +++ DFG+           I E  YYR     
Sbjct: 143 GMAYLNAKKF-VHRNLAARNCMVAHDFTVKIGDFGM--------TRDIYETDYYRKGGKG 193
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKG 251
              + W APE L+D       T  +D+++F V+L EI      P+ G        +   G
Sbjct: 194 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 249
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
              ++P         D+C   V   MR CW   P  RP F  I   LK
Sbjct: 250 GYLDQP---------DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
           ++ I   P+E +  +     D++  TY +        +GM +L  S    H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
           VT   V+++ DFGL           I    YY+        + W APE L D       T
Sbjct: 190 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 237
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
            ++DV++F V++ EI    G P+ G  + E      +G   ++P          +C   +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 288
Query: 274 LACMRDCWAEAPESRPDF 291
              MRDCW   P  RP F
Sbjct: 289 YMMMRDCWHAVPSQRPTF 306

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 69/168 (41%), Gaps = 35/168 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+      H NL + NC+V   + +++ DFG+           I E  YYR     
Sbjct: 142 GMAYLNAKKF-VHRNLAARNCMVAHDFTVKIGDFGM--------TRDIYETDYYRKGGKG 192
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKG 251
              + W APE L+D       T  +D+++F V+L EI      P+ G        +   G
Sbjct: 193 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 248
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
              ++P         D+C   V   MR CW   P  RP F  I   LK
Sbjct: 249 GYLDQP---------DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
           ++ I   P+E +  +     D++  TY +        +GM +L  S    H +L + N +
Sbjct: 135 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 181
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
           VT   V+++ DFGL           I    YY+        + W APE L D       T
Sbjct: 182 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 229
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
            ++DV++F V++ EI    G P+ G  + E      +G   ++P          +C   +
Sbjct: 230 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 280
Query: 274 LACMRDCWAEAPESRPDF 291
              MRDCW   P  RP F
Sbjct: 281 YMMMRDCWHAVPSQRPTF 298

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
           ++ I   P+E +  +     D++  TY +        +GM +L  S    H +L + N +
Sbjct: 132 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 178
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
           VT   V+++ DFGL           I    YY+        + W APE L D       T
Sbjct: 179 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 226
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
            ++DV++F V++ EI    G P+ G  + E      +G   ++P          +C   +
Sbjct: 227 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 277
Query: 274 LACMRDCWAEAPESRPDF 291
              MRDCW   P  RP F
Sbjct: 278 YMMMRDCWHAVPSQRPTF 295

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 136 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 191
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 192 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 242
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 243 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
           +H P+E L  +     D++   Y +        +GM +L  S    H +L + N +VT  
Sbjct: 133 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 179
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
            V+++ DFGL    H  +        YY+        + W APE L D       T ++D
Sbjct: 180 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 227
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
           V++F V+L EI    G P+ G  + E      +G   ++P          +C   +   M
Sbjct: 228 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 278
Query: 278 RDCWAEAPESRPDF 291
           RDCW   P  RP F
Sbjct: 279 RDCWHAVPSQRPTF 292

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
           ++ I   P+E +  +     D++  TY +        +GM +L  S    H +L + N +
Sbjct: 130 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLTARNVL 176
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
           VT   V+++ DFGL           I    YY+        + W APE L D       T
Sbjct: 177 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 224
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
            ++DV++F V++ EI    G P+ G  + E      +G   ++P          +C   +
Sbjct: 225 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 275
Query: 274 LACMRDCWAEAPESRPDF 291
              MRDCW   P  RP F
Sbjct: 276 YMMMRDCWHAVPSQRPTF 293

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 123 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 178
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 179 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 229
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 123 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 178
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 179 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 229
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 128 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 183
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 184 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 234
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
           +H P+E L  +     D++   Y +        +GM +L  S    H +L + N +VT  
Sbjct: 140 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 186
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
            V+++ DFGL    H  +        YY+        + W APE L D       T ++D
Sbjct: 187 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 234
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
           V++F V+L EI    G P+ G  + E      +G   ++P          +C   +   M
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 285
Query: 278 RDCWAEAPESRPDF 291
           RDCW   P  RP F
Sbjct: 286 RDCWHAVPSQRPTF 299

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 125 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 180
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 181 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 231
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 232 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 123 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 178
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 179 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 229
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
           +H P+E L  +     D++   Y +        +GM +L  S    H +L + N +VT  
Sbjct: 132 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 178
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
            V+++ DFGL    H  +        YY+        + W APE L D       T ++D
Sbjct: 179 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 226
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
           V++F V+L EI    G P+ G  + E      +G   ++P          +C   +   M
Sbjct: 227 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 277
Query: 278 RDCWAEAPESRPDF 291
           RDCW   P  RP F
Sbjct: 278 RDCWHAVPSQRPTF 291

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 125 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 180
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 181 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 231
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 232 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
           +H P+E L  +     D++   Y +        +GM +L  S    H +L + N +VT  
Sbjct: 129 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 175
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
            V+++ DFGL    H  +        YY+        + W APE L D       T ++D
Sbjct: 176 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 223
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
           V++F V+L EI    G P+ G  + E      +G   ++P          +C   +   M
Sbjct: 224 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 274
Query: 278 RDCWAEAPESRPDF 291
           RDCW   P  RP F
Sbjct: 275 RDCWHAVPSQRPTF 288

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 123 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 178
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 179 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 229
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
           +H P+E L  +     D++   Y +        +GM +L  S    H +L + N +VT  
Sbjct: 140 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 186
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
            V+++ DFGL    H  +        YY+        + W APE L D       T ++D
Sbjct: 187 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 234
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
           V++F V+L EI    G P+ G  + E      +G   ++P          +C   +   M
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 285
Query: 278 RDCWAEAPESRPDF 291
           RDCW   P  RP F
Sbjct: 286 RDCWHAVPSQRPTF 299

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 124 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKW 179
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 180 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 230
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 231 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 127 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 182
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 183 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 233
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 234 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 23/209 (11%)
Query: 102 LDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLK 161
           L + +N  + ++P++       ++ D + + +L+ +   + + GM FL  S    H +L 
Sbjct: 125 LRSKRNEFVPYKPED-------LYKDFLTLEHLIXYSFQVAK-GMEFL-ASRKXIHRDLA 175
Query: 162 SSNCVVTSRWVLQVTDFGLHELRHCAEN-DSIGEHQYYRSLLWKAPELLRDTHAPIRGTQ 220
           + N +++ + V+++ DFGL   R   ++ D + +      L W APE + D    I    
Sbjct: 176 ARNILLSEKNVVKICDFGL--ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI---- 229
Query: 221 KADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRD 279
           ++DV++F V+L EI      P+ G  + E      +E  R       D   P +   M D
Sbjct: 230 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLD 286
Query: 280 CWAEAPESRPDFPTIRARLKHMKDGKQKN 308
           CW   P  RP F  +   ++H+ +  Q N
Sbjct: 287 CWHGEPSQRPTFSEL---VEHLGNLLQAN 312

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 123 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 178
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 179 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 229
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 128 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 183
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 184 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 234
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 128 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 183
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 184 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 234
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
           GM +L+ +    H +L + NC+V   + +++ DFG+   R   E D     +  + LL  
Sbjct: 144 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGMT--RDIXETDX--XRKGGKGLLPV 198
Query: 203 -WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRP 260
            W +PE L+D       T  +DV++F V+L EI      P+        +G   E+  R 
Sbjct: 199 RWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQVLRF 246
Query: 261 NLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
            +E  LL   D+C   +   MR CW   P+ RP F  I + +K 
Sbjct: 247 VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
           +H P+E L  +     D++   Y +        +GM +L  S    H +L + N +VT  
Sbjct: 125 SHNPEEQLSSK-----DLVSCAYQVA-------RGMEYL-ASKKCIHRDLAARNVLVTED 171
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
            V+++ DFGL    H  +        YY+        + W APE L D       T ++D
Sbjct: 172 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 219
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
           V++F V+L EI    G P+ G  + E      +G   ++P          +C   +   M
Sbjct: 220 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 270
Query: 278 RDCWAEAPESRPDF 291
           RDCW   P  RP F
Sbjct: 271 RDCWHAVPSQRPTF 284

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 123 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 178
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 179 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 229
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 128 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKW 183
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L      I    K+DV+AF V+L EI      P+ G  L         E    + 
Sbjct: 184 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 234
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 33/195 (16%)
Query: 126 SDIIIITYLMNFGDGI-PRQ----------GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQ 174
           S+  ++ YL + G G+ P Q          GM FL       H +L + NC+V     ++
Sbjct: 86  SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF-IHRDLAARNCLVDRDLCVK 144
Query: 175 VTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEI 234
           V+DFG+   R+  ++  +        + W APE+        + + K+DV+AF +++ E+
Sbjct: 145 VSDFGM--TRYVLDDQYVSSVGTKFPVKWSAPEVFH----YFKYSSKSDVWAFGILMWEV 198
Query: 235 IGR-RGPFGGCGLYEP-----KGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR 288
               + P+    LY       K       +RP+L          +   M  CW E PE R
Sbjct: 199 FSLGKMPYD---LYTNSEVVLKVSQGHRLYRPHL------ASDTIYQIMYSCWHELPEKR 249
Query: 289 PDFPTIRARLKHMKD 303
           P F  + + ++ +++
Sbjct: 250 PTFQQLLSSIEPLRE 264

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAE 188
           + T L   GD     GM +L  S    H +L + NC+VT + VL+++DFG+  E      
Sbjct: 212 VKTLLQMVGDAAA--GMEYLE-SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVX 268
Query: 189 NDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLY 247
             S G  Q    + W APE L       R + ++DV++F ++L E       P+      
Sbjct: 269 AASGGLRQV--PVKWTAPEALNYG----RYSSESDVWSFGILLWETFSLGASPYPNLSNQ 322
Query: 248 EPKGEDCEEPFR-PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           + + E  E+  R P  EL    C   V   M  CWA  P  RP F TI   L+ ++
Sbjct: 323 QTR-EFVEKGGRLPCPEL----CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 35/188 (18%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
           +H P+E L  +     D++   Y +        +GM +L  S    H +L + N +VT  
Sbjct: 140 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 186
Query: 171 WVLQVTDFGL-HELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAV 229
            V+++ DFGL  ++ H          +    + W APE L D       T ++DV++F V
Sbjct: 187 NVMKIADFGLARDIHHIDXXKKTTNGRL--PVKWMAPEALFDRIY----THQSDVWSFGV 240
Query: 230 ILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE 283
           +L EI    G P+ G  + E      +G   ++P          +C   +   MRDCW  
Sbjct: 241 LLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMMRDCWHA 291
Query: 284 APESRPDF 291
            P  RP F
Sbjct: 292 VPSQRPTF 299

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 26/163 (15%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +L  + +  H +L + NC+V    V++V+DFG+   R   ++           + W
Sbjct: 114 EGMAYLEEASV-IHRDLAARNCLVGENQVIKVSDFGM--TRFVLDDQYTSSTGTKFPVKW 170
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----EDCEEPF 258
            +PE+   +    R + K+DV++F V++ E+        G   YE +      ED    F
Sbjct: 171 ASPEVFSFS----RYSSKSDVWSFGVLMWEVFSE-----GKIPYENRSNSEVVEDISTGF 221
Query: 259 R---PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           R   P L          V   M  CW E PE RP F  +  +L
Sbjct: 222 RLYKPRL------ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAE 188
           + T L   GD     GM +L  S    H +L + NC+VT + VL+++DFG+  E      
Sbjct: 212 VKTLLQMVGDAAA--GMEYLE-SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268
Query: 189 NDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLY 247
             S G  Q    + W APE L       R + ++DV++F ++L E       P+      
Sbjct: 269 AASGGLRQV--PVKWTAPEALNYG----RYSSESDVWSFGILLWETFSLGASPYPNLSNQ 322
Query: 248 EPKGEDCEEPFR-PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           + + E  E+  R P  EL    C   V   M  CWA  P  RP F TI   L+ ++
Sbjct: 323 QTR-EFVEKGGRLPCPEL----CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 136 LYKDFLTLEHLIXYSFQVAK-GMEFL-ASRKXIHRDLAARNILLSEKNVVKIXDFGLARD 193
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
            +  + D + +      L W APE + D    I    ++DV++F V+L EI      P+ 
Sbjct: 194 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 248
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+ 
Sbjct: 249 GVKIDEEFXRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 302
Query: 303 DGKQKN 308
           +  Q N
Sbjct: 303 NLLQAN 308

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 35/168 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+      H +L + NC+V   + +++ DFG+           I E  YYR     
Sbjct: 141 GMAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM--------TRDIYETDYYRKGGKG 191
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKG 251
              + W APE L+D       T  +D+++F V+L EI      P+ G        +   G
Sbjct: 192 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 247
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
              ++P         D+C   V   MR CW   P+ RP F  I   LK
Sbjct: 248 GYLDQP---------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 123 GIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHE 182
           G + + I +  L+++   + R GM FL  S    H +L + N +++   V+++ DFGL  
Sbjct: 190 GFYKEPITMEDLISYSFQVAR-GMEFLS-SRKCIHRDLAARNILLSENNVVKICDFGLA- 246
Query: 183 LRHCAEN-DSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-P 240
            R   +N D + +      L W APE + D    I  T K+DV+++ V+L EI    G P
Sbjct: 247 -RDIYKNPDYVRKGDTRLPLKWMAPESIFDK---IYST-KSDVWSYGVLLWEIFSLGGSP 301
Query: 241 FGGCGLYEPKGEDCEEPFRPNLELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           + G  +     ED     R  + +   +   P +   M DCW   P+ RP F  +  +L
Sbjct: 302 YPGVQM----DEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 121 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTFTAHAGAKFPIKW 176
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCG---LYEPKGEDCEEPFR 259
            APE L      I    K+DV+AF V+L EI      P+ G     +YE   +D     R
Sbjct: 177 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME-R 231
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           P      + C   V   MR CW   P  RP F  I    + M
Sbjct: 232 P------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM FL  S    H +L + NC++  ++ ++V DFGL    +  E DS+ 
Sbjct: 133 LIGFGLQVAK-GMKFL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 190
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 191 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 246
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 247 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 289

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +L  + +  H +L + NC+V    V++V+DFG+   R   ++           + W
Sbjct: 134 EGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGM--TRFVLDDQYTSSTGTKFPVKW 190
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----EDCEEPF 258
            +PE+   +    R + K+DV++F V++ E+        G   YE +      ED    F
Sbjct: 191 ASPEVFSFS----RYSSKSDVWSFGVLMWEVFSE-----GKIPYENRSNSEVVEDISTGF 241
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
           R     L  +    V   M  CW E PE RP F  +  +L  + +
Sbjct: 242 RLYKPRLAST---HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 283

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 35/192 (18%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
           ++ I   P+E +  +     D++  TY +        +GM +L  S    H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLWKAPELLRDTHAPIRGTQKADVY 225
           VT   V+++ DFGL   R     D   +    R  + W APE L D       T ++DV+
Sbjct: 190 VTENNVMKIADFGLA--RDINNIDXXKKTTNGRLPVKWMAPEALFDRVY----THQSDVW 243
Query: 226 AFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRD 279
           +F V++ EI    G P+ G  + E      +G   ++P          +C   +   MRD
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNELYMMMRD 294
Query: 280 CWAEAPESRPDF 291
           CW   P  RP F
Sbjct: 295 CWHAVPSQRPTF 306

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 35/192 (18%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
           ++ I   P+E +  +     D++  TY +        +GM +L  S    H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLWKAPELLRDTHAPIRGTQKADVY 225
           VT   V+++ DFGL   R     D   +    R  + W APE L D       T ++DV+
Sbjct: 190 VTENNVMKIADFGLA--RDINNIDXXKKTTNGRLPVKWMAPEALFDRVY----THQSDVW 243
Query: 226 AFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRD 279
           +F V++ EI    G P+ G  + E      +G   ++P          +C   +   MRD
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNELYMMMRD 294
Query: 280 CWAEAPESRPDF 291
           CW   P  RP F
Sbjct: 295 CWHAVPSQRPTF 306

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 35/199 (17%)
Query: 111 AHRPQETLKLRIGIHSDIII-ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS 169
           AH  + ++KLR+ +  DI + I Y+ N              ++P   H +L+S N  + S
Sbjct: 116 AHPIKWSVKLRLML--DIALGIEYMQN--------------QNPPIVHRDLRSPNIFLQS 159
Query: 170 R-----WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADV 224
                    +V DFG  +    + +  +G  Q      W APE +         T+KAD 
Sbjct: 160 LDENAPVCAKVADFGTSQQSVHSVSGLLGNFQ------WMAPETIGAEEESY--TEKADT 211
Query: 225 YAFAVILHEIIGRRGPFGGCGLYEPKGEDC--EEPFRPNLELLRDSCEPFVLACMRDCWA 282
           Y+FA+IL+ I+   GPF      + K  +   EE  RP +    + C P +   +  CW+
Sbjct: 212 YSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP---EDCPPRLRNVIELCWS 268
Query: 283 EAPESRPDFPTIRARLKHM 301
             P+ RP F  I   L  +
Sbjct: 269 GDPKKRPHFSYIVKELSEL 287

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----S 200
           GM +L    +  H +L + N +V  +  ++++D GL    + A+        YY+    S
Sbjct: 157 GMEYLSSHHV-VHKDLATRNVLVYDKLNVKISDLGLFREVYAAD--------YYKLLGNS 207
Query: 201 LL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEP 257
           LL   W APE +      I     +D++++ V+L E+    G    CG      +D  E 
Sbjct: 208 LLPIRWMAPEAIMYGKFSI----DSDIWSYGVVLWEVFSY-GLQPYCGY---SNQDVVEM 259
Query: 258 FRPNLELLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
            R N ++L   D C  +V A M +CW E P  RP F  I +RL+
Sbjct: 260 IR-NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 35/199 (17%)
Query: 111 AHRPQETLKLRIGIHSDIII-ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS 169
           AH  + ++KLR+ +  DI + I Y+ N              ++P   H +L+S N  + S
Sbjct: 116 AHPIKWSVKLRLML--DIALGIEYMQN--------------QNPPIVHRDLRSPNIFLQS 159
Query: 170 R-----WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADV 224
                    +V DF L +    + +  +G  Q      W APE +         T+KAD 
Sbjct: 160 LDENAPVCAKVADFSLSQQSVHSVSGLLGNFQ------WMAPETIGAEEESY--TEKADT 211
Query: 225 YAFAVILHEIIGRRGPFGGCGLYEPKGEDC--EEPFRPNLELLRDSCEPFVLACMRDCWA 282
           Y+FA+IL+ I+   GPF      + K  +   EE  RP +    + C P +   +  CW+
Sbjct: 212 YSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP---EDCPPRLRNVIELCWS 268
Query: 283 EAPESRPDFPTIRARLKHM 301
             P+ RP F  I   L  +
Sbjct: 269 GDPKKRPHFSYIVKELSEL 287

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM FL  S    H +L + NC++  ++ ++V DFGL    +  E DS+ 
Sbjct: 136 LIGFGLQVAK-GMKFL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 193
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 194 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 249
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 250 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 292

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM FL  S    H +L + NC++  ++ ++V DFGL    +  E DS+ 
Sbjct: 135 LIGFGLQVAK-GMKFL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 192
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 193 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 249 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 35/168 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+      H +L + NC+V   + +++ DFG+           I E  YYR     
Sbjct: 142 GMAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM--------TRDIYETDYYRKGGKG 192
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKG 251
              + W APE L+D       T  +D+++F V+L EI      P+ G        +   G
Sbjct: 193 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 248
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
              ++P         D+C   V   MR CW   P+ RP F  I   LK
Sbjct: 249 GYLDQP---------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +L  + +  H +L + NC+V    V++V+DFG+   R   ++           + W
Sbjct: 114 EGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGM--TRFVLDDQYTSSTGTKFPVKW 170
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----EDCEEPF 258
            +PE+   +    R + K+DV++F V++ E+        G   YE +      ED    F
Sbjct: 171 ASPEVFSFS----RYSSKSDVWSFGVLMWEVFSE-----GKIPYENRSNSEVVEDISTGF 221
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
           R     L  +    V   M  CW E PE RP F  +  +L  + +
Sbjct: 222 RLYKPRLAST---HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 263

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 26/169 (15%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +L  + +  H +L + NC+V    V++V+DFG+   R   ++           + W
Sbjct: 112 EGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGM--TRFVLDDQYTSSTGTKFPVKW 168
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----EDCEEPF 258
            +PE+   +    R + K+DV++F V++ E+        G   YE +      ED    F
Sbjct: 169 ASPEVFSFS----RYSSKSDVWSFGVLMWEVFSE-----GKIPYENRSNSEVVEDISTGF 219
Query: 259 R---PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDG 304
           R   P L          V   M  CW E PE RP F  +  +L  + + 
Sbjct: 220 RLYKPRL------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 35/168 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L+      H +L + NC+V   + +++ DFG+           I E  YYR     
Sbjct: 142 GMAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM--------TRDIYETAYYRKGGKG 192
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKG 251
              + W APE L+D       T  +D+++F V+L EI      P+ G        +   G
Sbjct: 193 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 248
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
              ++P         D+C   V   MR CW   P+ RP F  I   LK
Sbjct: 249 GYLDQP---------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 14/159 (8%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
            M +L +     H +L + NC+V    +++V DFGL  L       +    ++   + W 
Sbjct: 125 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF--PIKWT 181
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNLE 263
           APE L      I    K+DV+AF V+L EI      P+ G  L         E    +  
Sbjct: 182 APESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDYR 232
Query: 264 LLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           + R + C   V   MR CW   P  RP F  I    + M
Sbjct: 233 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM FL  S    H +L + NC++  ++ ++V DFGL    +  E DS+ 
Sbjct: 140 LIGFGLQVAK-GMKFL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 197
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 198 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 253
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 254 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 296

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM FL  S    H +L + NC++  ++ ++V DFGL    +  E DS+ 
Sbjct: 135 LIGFGLQVAK-GMKFL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 192
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 193 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 249 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE 188
           +++  L++F   I  +GM ++ R     H +L+++N +V+   + ++ DFGL   R   +
Sbjct: 107 VLLPKLIDFSAQIA-EGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLA--RVIED 162
Query: 189 NDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLY 247
           N+          + W APE +      I    K+DV++F ++L+EI+   + P+ G    
Sbjct: 163 NEYTAREGAKFPIKWTAPEAINFGCFTI----KSDVWSFGILLYEIVTYGKIPYPG---- 214
Query: 248 EPKGEDCEEPFRPNLELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
                D          + R ++C   +   M+ CW E  E RP F  +++ L
Sbjct: 215 -RTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVL 265

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----S 200
           GM +L    +  H +L + N +V  +  ++++D GL    + A+        YY+    S
Sbjct: 140 GMEYLSSHHV-VHKDLATRNVLVYDKLNVKISDLGLFREVYAAD--------YYKLLGNS 190
Query: 201 LL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEP 257
           LL   W APE +      I     +D++++ V+L E+    G    CG      +D  E 
Sbjct: 191 LLPIRWMAPEAIMYGKFSI----DSDIWSYGVVLWEVFSY-GLQPYCGY---SNQDVVEM 242
Query: 258 FRPNLELLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
            R N ++L   D C  +V A M +CW E P  RP F  I +RL+
Sbjct: 243 IR-NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM FL       H +L + NC++  ++ ++V DFGL    +  E DS+ 
Sbjct: 194 LIGFGLQVAK-GMKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 251
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 252 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 307
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 308 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 350

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 121 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKW 176
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCG---LYEPKGEDCEEPFR 259
            APE L      I    K+DV+AF V+L EI      P+ G     +YE   +D     R
Sbjct: 177 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME-R 231
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           P      + C   V   MR CW   P  RP F  I    + M
Sbjct: 232 P------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
            M +L +     H +L + NC+V    +++V DFGL  L      D+   H   +  + W
Sbjct: 121 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKW 176
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCG---LYEPKGEDCEEPFR 259
            APE L      I    K+DV+AF V+L EI      P+ G     +YE   +D     R
Sbjct: 177 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME-R 231
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           P      + C   V   MR CW   P  RP F  I    + M
Sbjct: 232 P------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +L  + +  H +L + NC+V    V++V+DFG+   R   ++           + W
Sbjct: 115 EGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGM--TRFVLDDQYTSSTGTKFPVKW 171
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----EDCEEPF 258
            +PE+   +    R + K+DV++F V++ E+        G   YE +      ED    F
Sbjct: 172 ASPEVFSFS----RYSSKSDVWSFGVLMWEVFSE-----GKIPYENRSNSEVVEDISTGF 222
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
           R     L  +    V   M  CW E PE RP F  +  +L  + +
Sbjct: 223 RLYKPRLAST---HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +L  + +  H +L + NC+V    V++V+DFG+   R   ++           + W
Sbjct: 117 EGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGM--TRFVLDDQYTSSTGTKFPVKW 173
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----EDCEEPF 258
            +PE+   +    R + K+DV++F V++ E+        G   YE +      ED    F
Sbjct: 174 ASPEVFSFS----RYSSKSDVWSFGVLMWEVFSE-----GKIPYENRSNSEVVEDISTGF 224
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
           R     L  +    V   M  CW E PE RP F  +  +L  + +
Sbjct: 225 RLYKPRLAST---HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266

>pdb|1YK9|A Chain A, Crystal Structure Of A Mutant Form Of The Mycobacterial Adenylyl Cyclase Rv1625c Length = 204

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 3   RYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYW 62
           RYC++GD VN ASRMEST    +I +       L     +++ ERG + +KGKG + T++
Sbjct: 124 RYCVWGDAVNVASRMESTDSVGQIQVPDEVYERLKD--DFVLRERGHINVKGKGVMRTWY 181
Query: 63  LVG----ATEGAVQGRE 75
           L+G    A  G V+G E
Sbjct: 182 LIGRKVAADPGEVRGAE 198

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 31/186 (16%)
Query: 145 GMTFLHRSPIGCHG-------NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
           G+  LH   +G  G       +LKS N +V       + D GL  +RH +  D+I     
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPN 196
Query: 198 YR--SLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPFGGC--------- 244
           +R  +  + APE+L D+         ++AD+YA  ++  E I RR   GG          
Sbjct: 197 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPYY 255
Query: 245 -------GLYEPKGEDCEEPFRPNLELLRDSCEPF-VLA-CMRDCWAEAPESRPDFPTIR 295
                   + E +   CE+  RPN+     SCE   V+A  MR+CW     +R     I+
Sbjct: 256 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 315
Query: 296 ARLKHM 301
             L  +
Sbjct: 316 KTLSQL 321

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 31/186 (16%)
Query: 145 GMTFLHRSPIGCHG-------NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
           G+  LH   +G  G       +LKS N +V       + D GL  +RH +  D+I     
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPN 176
Query: 198 YR--SLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPFGGC--------- 244
           +R  +  + APE+L D+         ++AD+YA  ++  E I RR   GG          
Sbjct: 177 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPYY 235
Query: 245 -------GLYEPKGEDCEEPFRPNLELLRDSCEPF-VLA-CMRDCWAEAPESRPDFPTIR 295
                   + E +   CE+  RPN+     SCE   V+A  MR+CW     +R     I+
Sbjct: 236 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 295
Query: 296 ARLKHM 301
             L  +
Sbjct: 296 KTLSQL 301

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLL 202
           QGM +L    +  H +L + N +V     ++++DFGL   R   E DS +   Q    + 
Sbjct: 161 QGMQYLAEMSL-VHRDLAARNILVAEGRKMKISDFGLS--RDVYEEDSXVKRSQGRIPVK 217
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCG---LYE--PKGEDCEE 256
           W A E L D       T ++DV++F V+L EI+   G P+ G     L+     G   E 
Sbjct: 218 WMAIESLFDHIY----TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMER 273
Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           P         D+C   +   M  CW + P+ RP F  I   L+ M
Sbjct: 274 P---------DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 31/186 (16%)
Query: 145 GMTFLHRSPIGCHG-------NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
           G+  LH   +G  G       +LKS N +V       + D GL  +RH +  D+I     
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPN 170
Query: 198 YR--SLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPFGGC--------- 244
           +R  +  + APE+L D+         ++AD+YA  ++  E I RR   GG          
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPYY 229
Query: 245 -------GLYEPKGEDCEEPFRPNLELLRDSCEPF-VLA-CMRDCWAEAPESRPDFPTIR 295
                   + E +   CE+  RPN+     SCE   V+A  MR+CW     +R     I+
Sbjct: 230 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289
Query: 296 ARLKHM 301
             L  +
Sbjct: 290 KTLSQL 295

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLL 202
           QGM +L    +  H +L + N +V     ++++DFGL   R   E DS +   Q    + 
Sbjct: 161 QGMQYLAEMKL-VHRDLAARNILVAEGRKMKISDFGLS--RDVYEEDSXVKRSQGRIPVK 217
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCG---LYE--PKGEDCEE 256
           W A E L D       T ++DV++F V+L EI+   G P+ G     L+     G   E 
Sbjct: 218 WMAIESLFDHIY----TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMER 273
Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           P         D+C   +   M  CW + P+ RP F  I   L+ M
Sbjct: 274 P---------DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 31/186 (16%)
Query: 145 GMTFLHRSPIGCHG-------NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
           G+  LH   +G  G       +LKS N +V       + D GL  +RH +  D+I     
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPN 209
Query: 198 YR--SLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPFGGC--------- 244
           +R  +  + APE+L D+         ++AD+YA  ++  E I RR   GG          
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPYY 268
Query: 245 -------GLYEPKGEDCEEPFRPNLELLRDSCEPF-VLA-CMRDCWAEAPESRPDFPTIR 295
                   + E +   CE+  RPN+     SCE   V+A  MR+CW     +R     I+
Sbjct: 269 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 328
Query: 296 ARLKHM 301
             L  +
Sbjct: 329 KTLSQL 334

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLL 202
           QGM +L    +  H +L + N +V     ++++DFGL   R   E DS +   Q    + 
Sbjct: 161 QGMQYLAEMKL-VHRDLAARNILVAEGRKMKISDFGLS--RDVYEEDSYVKRSQGRIPVK 217
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCG---LYE--PKGEDCEE 256
           W A E L D       T ++DV++F V+L EI+   G P+ G     L+     G   E 
Sbjct: 218 WMAIESLFDHIY----TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMER 273
Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           P         D+C   +   M  CW + P+ RP F  I   L+ M
Sbjct: 274 P---------DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 31/186 (16%)
Query: 145 GMTFLHRSPIGCHG-------NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
           G+  LH   +G  G       +LKS N +V       + D GL  +RH +  D+I     
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPN 173
Query: 198 YR--SLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPFGGC--------- 244
           +R  +  + APE+L D+         ++AD+YA  ++  E I RR   GG          
Sbjct: 174 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPYY 232
Query: 245 -------GLYEPKGEDCEEPFRPNLELLRDSCEPF-VLA-CMRDCWAEAPESRPDFPTIR 295
                   + E +   CE+  RPN+     SCE   V+A  MR+CW     +R     I+
Sbjct: 233 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 292
Query: 296 ARLKHM 301
             L  +
Sbjct: 293 KTLSQL 298

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 31/186 (16%)
Query: 145 GMTFLHRSPIGCHG-------NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
           G+  LH   +G  G       +LKS N +V       + D GL  +RH +  D+I     
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPN 171
Query: 198 YR--SLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPFGGC--------- 244
           +R  +  + APE+L D+         ++AD+YA  ++  E I RR   GG          
Sbjct: 172 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPYY 230
Query: 245 -------GLYEPKGEDCEEPFRPNLELLRDSCEPF-VLA-CMRDCWAEAPESRPDFPTIR 295
                   + E +   CE+  RPN+     SCE   V+A  MR+CW     +R     I+
Sbjct: 231 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 290
Query: 296 ARLKHM 301
             L  +
Sbjct: 291 KTLSQL 296

>pdb|1AB8|A Chain A, Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COMPLEX Length = 220

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 2   PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTY 61
           P+Y ++G+TVN ASRM+STG   +I ++      L  L GY    RG++ +KGKG++ TY
Sbjct: 145 PQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTL-GYTCTCRGIINVKGKGDLKTY 203
Query: 62  WL 63
           ++
Sbjct: 204 FV 205

>pdb|3UVJ|B Chain B, Crystal Structure Of The Catalytic Domain Of The Heterodimeric Human Soluble Guanylate Cyclase 1. Length = 220

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAAL----DKLGGYIVEERGVVCMKGKG 56
           MPRY LFG+TVN  SR E+TGE  +I++S      L    +    + +E RG V MKGK 
Sbjct: 131 MPRYSLFGNTVNLTSRTETTGEKGKINVSEYTYRCLMSPENSDPQFHLEHRGPVSMKGKK 190
Query: 57  EVLTYWLV 64
           E +  W +
Sbjct: 191 EPMQVWFL 198

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+S+N +V +  + ++ DFGL  L    +N+          + W 
Sbjct: 117 GMAYIERMNY-IHRDLRSANILVGNGLICKIADFGLARL--IEDNEXTARQGAKFPIKWT 173
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E++ + R P+ G    E   E  E  +R  
Sbjct: 174 APE------AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL-EQVERGYR-- 224
Query: 262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           +   +D C   +   M  CW + PE RP F  +++ L+
Sbjct: 225 MPCPQD-CPISLHELMIHCWKKDPEERPTFEYLQSFLE 261

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 26/179 (14%)
Query: 141 IPRQ---GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE------NDS 191
           I RQ   GM +L       H +L + NC+V    V+++ DFGL    + A+      ND+
Sbjct: 179 IARQVAAGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDA 237
Query: 192 IGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG 251
           I        + W  PE +       R T ++DV+A+ V+L EI      +G    Y    
Sbjct: 238 I-------PIRWMPPESIFYN----RYTTESDVWAYGVVLWEIFS----YGLQPYYGMAH 282
Query: 252 EDCEEPFRP-NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNI 309
           E+     R  N+    ++C   +   MR CW++ P  RP F +I   L+ M +  +  +
Sbjct: 283 EEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGTV 341

>pdb|1CUL|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With 2',5'-Dideoxy-Adenosine 3'- Triphosphate And Mg Length = 208

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 2   PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTY 61
           P+Y ++G+TVN ASRM+STG   +I ++      L  L GY    RG++ +KGKG++ TY
Sbjct: 142 PQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTL-GYTCTCRGIINVKGKGDLKTY 200
Query: 62  WL 63
           ++
Sbjct: 201 FV 202

>pdb|1AZS|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase Length = 212

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 2   PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTY 61
           P+Y ++G+TVN ASRM+STG   +I ++      L  L GY    RG++ +KGKG++ TY
Sbjct: 146 PQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTL-GYTCTCRGIINVKGKGDLKTY 204
Query: 62  WL 63
           ++
Sbjct: 205 FV 206

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE 188
           +++  L++F   I  +GM ++ R     H +L+++N +V+   + ++ DFGL   R   +
Sbjct: 106 VLLPKLIDFSAQIA-EGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLA--RVIED 161
Query: 189 NDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLY 247
           N+          + W APE +      I    K++V++F ++L+EI+   + P+ G    
Sbjct: 162 NEYTAREGAKFPIKWTAPEAINFGCFTI----KSNVWSFGILLYEIVTYGKIPYPG---- 213
Query: 248 EPKGEDCEEPFRPNLELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
                D          + R ++C   +   M+ CW E  E RP F  +++ L
Sbjct: 214 -RTNADVMSALSQGYRMPRMENCPDELYDIMKMCWKEKAEERPTFDYLQSVL 264

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 136 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKXIHRDLAARNILLSEKNVVKICDFGLARD 193
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
            +  + D + +      L W APE + D    I    ++DV++F V+L EI      P+ 
Sbjct: 194 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 248
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+ 
Sbjct: 249 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 302
Query: 303 DGKQKN 308
           +  Q N
Sbjct: 303 NLLQAN 308

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 131 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
            +  + D + +      L W APE + D    I    ++DV++F V+L EI      P+ 
Sbjct: 189 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 243
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+ 
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 297
Query: 303 DGKQKN 308
           +  Q N
Sbjct: 298 NLLQAN 303

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM FL  S    H +L + NC++  ++ ++V DFGL       E DS+ 
Sbjct: 136 LIGFGLQVAK-GMKFL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVH 193
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 194 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 249
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 250 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 292

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 177 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 234
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
            +  + D + +      L W APE + D    I    ++DV++F V+L EI      P+ 
Sbjct: 235 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 289
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+ 
Sbjct: 290 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 343
Query: 303 DGKQKN 308
           +  Q N
Sbjct: 344 NLLQAN 349

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 190 LYKDFLTLEHLICYSFQVAK-GMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARD 247
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
            +  + D + +      L W APE + D    I    ++DV++F V+L EI      P+ 
Sbjct: 248 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 302
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+ 
Sbjct: 303 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 356
Query: 303 DGKQKN 308
           +  Q N
Sbjct: 357 NLLQAN 362

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 131 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
            +  + D + +      L W APE + D    I    ++DV++F V+L EI      P+ 
Sbjct: 189 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 243
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+ 
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 297
Query: 303 DGKQKN 308
           +  Q N
Sbjct: 298 NLLQAN 303

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 183 LYKDFLTLEHLICYSFQVAK-GMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARD 240
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
            +  + D + +      L W APE + D    I    ++DV++F V+L EI      P+ 
Sbjct: 241 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 295
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+ 
Sbjct: 296 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 349
Query: 303 DGKQKN 308
           +  Q N
Sbjct: 350 NLLQAN 355

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 140 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
            +  + D + +      L W APE + D    I    ++DV++F V+L EI      P+ 
Sbjct: 198 IY-KDPDXVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 252
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+ 
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 306
Query: 303 DGKQKN 308
           +  Q N
Sbjct: 307 NLLQAN 312

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 192 LYKDFLTLEHLICYSFQVAK-GMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARD 249
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
            +  + D + +      L W APE + D    I    ++DV++F V+L EI      P+ 
Sbjct: 250 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 304
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+ 
Sbjct: 305 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 358
Query: 303 DGKQKN 308
           +  Q N
Sbjct: 359 NLLQAN 364

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 185 LYKDFLTLEHLICYSFQVAK-GMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARD 242
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
            +  + D + +      L W APE + D    I    ++DV++F V+L EI      P+ 
Sbjct: 243 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 297
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+ 
Sbjct: 298 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 351
Query: 303 DGKQKN 308
           +  Q N
Sbjct: 352 NLLQAN 357

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 131 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGL--A 186
Query: 184 RHCAEN-DSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPF 241
           R   ++ D + +      L W APE + D    I    ++DV++F V+L EI      P+
Sbjct: 187 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPY 242
Query: 242 GGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+
Sbjct: 243 PGVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHL 296
Query: 302 KDGKQKN 308
            +  Q N
Sbjct: 297 GNLLQAN 303

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 131 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGL--A 186
Query: 184 RHCAEN-DSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPF 241
           R   ++ D + +      L W APE + D    I    ++DV++F V+L EI      P+
Sbjct: 187 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPY 242
Query: 242 GGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+
Sbjct: 243 PGVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHL 296
Query: 302 KDGKQKN 308
            +  Q N
Sbjct: 297 GNLLQAN 303

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 140 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
            +  + D + +      L W APE + D    I    ++DV++F V+L EI      P+ 
Sbjct: 198 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 252
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+ 
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 306
Query: 303 DGKQKN 308
           +  Q N
Sbjct: 307 NLLQAN 312

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 142 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 199
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
            +  + D + +      L W APE + D    I    ++DV++F V+L EI      P+ 
Sbjct: 200 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 254
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+ 
Sbjct: 255 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 308
Query: 303 DGKQKN 308
           +  Q N
Sbjct: 309 NLLQAN 314

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 27/192 (14%)
Query: 118 LKLRIGIHSDIIIITYLMNFGDGIPRQG-MTFLHRSPIGCHGNLKSSNCVVTSRWVLQVT 176
           L+L  G  + I ++  L     G+     M+++HR       +L + N +V S  V +V+
Sbjct: 106 LRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR-------DLAARNILVNSNLVCKVS 158
Query: 177 DFGLHELRHCAENDSIGEHQYYRSL------LWKAPELLRDTHAPIRGTQKADVYAFAVI 230
           DFGL   R   EN S  +  Y  SL       W APE +    A  + T  +D +++ ++
Sbjct: 159 DFGLS--RFLEENSS--DPTYTSSLGGKIPIRWTAPEAI----AFRKFTSASDAWSYGIV 210
Query: 231 LHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD-SCEPFVLACMRDCWAEAPESRP 289
           + E++     FG    ++   +D       +  L     C   +   M DCW +   +RP
Sbjct: 211 MWEVMS----FGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARP 266
Query: 290 DFPTIRARLKHM 301
            FP + + L  M
Sbjct: 267 RFPQVVSALDKM 278

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
           GM +L+      H +L + NC+V   + +++ DFG+   R   E D     +  + LL  
Sbjct: 139 GMAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM--TRDIXETDX--XRKGGKGLLPV 193
Query: 203 -WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKGEDCE 255
            W APE L+D       T  +D+++F V+L EI      P+ G        +   G   +
Sbjct: 194 RWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD 249
Query: 256 EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           +P         D+C   V   MR CW   P+ RP F  I   LK
Sbjct: 250 QP---------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 140 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGL--A 195
Query: 184 RHCAEN-DSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPF 241
           R   ++ D + +      L W APE + D    I    ++DV++F V+L EI      P+
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPY 251
Query: 242 GGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+
Sbjct: 252 PGVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHL 305
Query: 302 KDGKQKN 308
            +  Q N
Sbjct: 306 GNLLQAN 312

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L       H NL + N ++ +R   +++DFGL +     ++           L W 
Sbjct: 448 GMKYLEEKNF-VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 506
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR--------RGPFGGCGLYEPKGEDCEE 256
           APE +       + + ++DV+++ V + E +          +GP     + + K  +C  
Sbjct: 507 APECINFR----KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP 562
Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
                       C P + A M DCW    E RPDF T+  R++
Sbjct: 563 -----------ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
           GM +L+      H +L + NC+V   + +++ DFG+   R   E D     +  + LL  
Sbjct: 142 GMAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM--TRDIXETDX--XRKGGKGLLPV 196
Query: 203 -WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKGEDCE 255
            W APE L+D       T  +D+++F V+L EI      P+ G        +   G   +
Sbjct: 197 RWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD 252
Query: 256 EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           +P         D+C   V   MR CW   P+ RP F  I   LK
Sbjct: 253 QP---------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           ++ D + + +L+ +   + + GM FL  S    H +L + N +++ + V+++ DFGL   
Sbjct: 140 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGL--A 195
Query: 184 RHCAEN-DSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPF 241
           R   ++ D + +      L W APE + D    I    ++DV++F V+L EI      P+
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPY 251
Query: 242 GGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            G  + E      +E  R       D   P +   M DCW   P  RP F  +   ++H+
Sbjct: 252 PGVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHL 305
Query: 302 KDGKQKN 308
            +  Q N
Sbjct: 306 GNLLQAN 312

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 27/164 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
           GM +L+      H +L + NC+V   + +++ DFG+   R   E D     +  + LL  
Sbjct: 142 GMAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM--TRDIXETDX--XRKGGKGLLPV 196
Query: 203 -WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKGEDCE 255
            W APE L+D       T  +D+++F V+L EI      P+ G        +   G   +
Sbjct: 197 RWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD 252
Query: 256 EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           +P         D+C   V   MR CW   P  RP F  I   LK
Sbjct: 253 QP---------DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
           FLHR       +L + NC+V  + V++V+DFGL   R+  +++          + W  PE
Sbjct: 126 FLHR-------DLAARNCLVNDQGVVKVSDFGLS--RYVLDDEYTSSRGSKFPVRWSPPE 176
Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD 267
           +L  +    + + K+D++AF V++ EI       G          +  E     L L R 
Sbjct: 177 VLMYS----KFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQGLRLYRP 228
Query: 268 S-CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
                 V   M  CW E  + RP F  + + +  + D
Sbjct: 229 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
           FLHR       +L + NC+V  + V++V+DFGL   R+  +++          + W  PE
Sbjct: 141 FLHR-------DLAARNCLVNDQGVVKVSDFGLS--RYVLDDEETSSVGSKFPVRWSPPE 191
Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD 267
           +L  +    + + K+D++AF V++ EI       G          +  E     L L R 
Sbjct: 192 VLMYS----KFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQGLRLYRP 243
Query: 268 S-CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
                 V   M  CW E  + RP F  + + +  + D
Sbjct: 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H ++ + N +V+S   +++ DFGL   R+  ++      +    + W APE +       
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 567
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
           R T  +DV+ F V + EI+     PF G    +  G  E+ E  P  PN       C P 
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 620
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
           + + M  CWA  P  RP F  ++A+L
Sbjct: 621 LYSLMTKCWAYDPSRRPRFTELKAQL 646

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H ++ + N +V+S   +++ DFGL   R+  ++      +    + W APE +       
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTXXKASKGKLPIKWMAPESINFR---- 187
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
           R T  +DV+ F V + EI+     PF G    +  G  E+ E  P  PN       C P 
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 240
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
           + + M  CWA  P  RP F  ++A+L
Sbjct: 241 LYSLMTKCWAYDPSRRPRFTELKAQL 266

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L       H +L + N ++ +R   +++DFGL +     ++           L W 
Sbjct: 122 GMKYLEEKNF-VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 180
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR--------RGPFGGCGLYEPKGEDCEE 256
           APE +       + + ++DV+++ V + E +          +GP     + + K  +C  
Sbjct: 181 APECINFR----KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP 236
Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
                       C P + A M DCW    E RPDF T+  R++
Sbjct: 237 -----------ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 68/171 (39%), Gaps = 20/171 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL-----------RHCAENDSI 192
            GM +LH   I  H +L S NC+V     + V DFGL  L           R   + D  
Sbjct: 119 SGMAYLHSMNI-IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRK 177
Query: 193 GEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE 252
             +    +  W APE++          +K DV++F ++L EIIGR         Y P+  
Sbjct: 178 KRYTVVGNPYWMAPEMINGRSY----DEKVDVFSFGIVLCEIIGR---VNADPDYLPRTM 230
Query: 253 DCEEPFRPNLE-LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           D     R  L+     +C P        C    PE RP F  +   L+ ++
Sbjct: 231 DFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
           FLHR       +L + NC+V  + V++V+DFGL   R+  +++          + W  PE
Sbjct: 141 FLHR-------DLAARNCLVNDQGVVKVSDFGLS--RYVLDDEYTSSVGSKFPVRWSPPE 191
Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD 267
           +L  +    + + K+D++AF V++ EI       G          +  E     L L R 
Sbjct: 192 VLMYS----KFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQGLRLYRP 243
Query: 268 S-CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
                 V   M  CW E  + RP F  + + +  + D
Sbjct: 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H ++ + N +V+S   +++ DFGL   R+  ++      +    + W APE +       
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 215
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
           R T  +DV+ F V + EI+     PF G    +  G  E+ E  P  PN       C P 
Sbjct: 216 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 268
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
           + + M  CWA  P  RP F  ++A+L
Sbjct: 269 LYSLMTKCWAYDPSRRPRFTELKAQL 294

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM +L       H +L + NC++  ++ ++V DFGL    +  E  S+ 
Sbjct: 134 LIGFGLQVAK-GMKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVH 191
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 192 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 247
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 248 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 290

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
           FLHR       +L + NC+V  + V++V+DFGL   R+  +++          + W  PE
Sbjct: 126 FLHR-------DLAARNCLVNDQGVVKVSDFGLS--RYVLDDEYTSSVGSKFPVRWSPPE 176
Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD 267
           +L  +    + + K+D++AF V++ EI       G          +  E     L L R 
Sbjct: 177 VLMYS----KFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQGLRLYRP 228
Query: 268 S-CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
                 V   M  CW E  + RP F  + + +  + D
Sbjct: 229 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H ++ + N +V+S   +++ DFGL   R+  ++      +    + W APE +       
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 192
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
           R T  +DV+ F V + EI+     PF G    +  G  E+ E  P  PN       C P 
Sbjct: 193 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 245
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
           + + M  CWA  P  RP F  ++A+L
Sbjct: 246 LYSLMTKCWAYDPSRRPRFTELKAQL 271

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H ++ + N +V+S   +++ DFGL   R+  ++      +    + W APE +       
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 187
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
           R T  +DV+ F V + EI+     PF G    +  G  E+ E  P  PN       C P 
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 240
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
           + + M  CWA  P  RP F  ++A+L
Sbjct: 241 LYSLMTKCWAYDPSRRPRFTELKAQL 266

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H ++ + N +V+S   +++ DFGL   R+  ++      +    + W APE +       
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 187
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
           R T  +DV+ F V + EI+     PF G    +  G  E+ E  P  PN       C P 
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 240
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
           + + M  CWA  P  RP F  ++A+L
Sbjct: 241 LYSLMTKCWAYDPSRRPRFTELKAQL 266

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
           FLHR       +L + NC+V  + V++V+DFGL   R+  +++          + W  PE
Sbjct: 132 FLHR-------DLAARNCLVNDQGVVKVSDFGLS--RYVLDDEYTSSVGSKFPVRWSPPE 182
Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD 267
           +L  +    + + K+D++AF V++ EI       G          +  E     L L R 
Sbjct: 183 VLMYS----KFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQGLRLYRP 234
Query: 268 S-CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
                 V   M  CW E  + RP F  + + +  + D
Sbjct: 235 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 271

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H ++ + N +V+S   +++ DFGL   R+  ++      +    + W APE +       
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 184
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
           R T  +DV+ F V + EI+     PF G    +  G  E+ E  P  PN       C P 
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 237
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
           + + M  CWA  P  RP F  ++A+L
Sbjct: 238 LYSLMTKCWAYDPSRRPRFTELKAQL 263

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
           FLHR       +L + NC+V  + V++V+DFGL   R+  +++          + W  PE
Sbjct: 121 FLHR-------DLAARNCLVNDQGVVKVSDFGLS--RYVLDDEYTSSVGSKFPVRWSPPE 171
Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD 267
           +L  +    + + K+D++AF V++ EI       G          +  E     L L R 
Sbjct: 172 VLMYS----KFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQGLRLYRP 223
Query: 268 S-CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
                 V   M  CW E  + RP F  + + +  + D
Sbjct: 224 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 260

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H ++ + N +V+S   +++ DFGL   R+  ++      +    + W APE +       
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 190
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
           R T  +DV+ F V + EI+     PF G    +  G  E+ E  P  PN       C P 
Sbjct: 191 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 243
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
           + + M  CWA  P  RP F  ++A+L
Sbjct: 244 LYSLMTKCWAYDPSRRPRFTELKAQL 269

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H ++ + N +V+S   +++ DFGL   R+  ++      +    + W APE +       
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 189
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
           R T  +DV+ F V + EI+     PF G    +  G  E+ E  P  PN       C P 
Sbjct: 190 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 242
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
           + + M  CWA  P  RP F  ++A+L
Sbjct: 243 LYSLMTKCWAYDPSRRPRFTELKAQL 268

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
           FLHR       +L + NC+V  + V++V+DFGL   R+  +++          + W  PE
Sbjct: 125 FLHR-------DLAARNCLVNDQGVVKVSDFGLS--RYVLDDEYTSSVGSKFPVRWSPPE 175
Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD 267
           +L  +    + + K+D++AF V++ EI       G          +  E     L L R 
Sbjct: 176 VLMYS----KFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQGLRLYRP 227
Query: 268 S-CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
                 V   M  CW E  + RP F  + + +  + D
Sbjct: 228 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 264

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 47/177 (26%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H +L + N +V S   +++ DFGL +L    ++  +        + W APE L D     
Sbjct: 134 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF-- 191
Query: 217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR---------- 266
             ++++DV++F V+L+E+                   C++   P+ E LR          
Sbjct: 192 --SRQSDVWSFGVVLYELFTY----------------CDKSCSPSAEFLRMMGCERDVPA 233
Query: 267 -----------------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ 306
                             +C   V   M+ CWA +P+ RP F  +  +L  +  G +
Sbjct: 234 LCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 290

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 45/177 (25%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L++F   I  +GM F+ +     H +L+++N +V++  V ++ DFGL           +G
Sbjct: 280 LIDFSAQIA-EGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLAR---------VG 328
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGC-------- 244
                  + W APE +      I    K+DV++F ++L EI+   R P+ G         
Sbjct: 329 AK---FPIKWTAPEAINFGSFTI----KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 381
Query: 245 ---GLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
              G   P+ E+C E                +   M  CW   PE RP F  I++ L
Sbjct: 382 LERGYRMPRPENCPEE---------------LYNIMMRCWKNRPEERPTFEYIQSVL 423

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM +L  S    H +L + NC++  ++ ++V DFGL    +  E  S+ 
Sbjct: 135 LIGFGLQVAK-GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 192
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 193 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 249 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 118 LKLRIGIHSDIIIITYLMNFGDGIPRQG-MTFLHRSPIGCHGNLKSSNCVVTSRWVLQVT 176
           L+L  G  + I ++  L     G+     M+++HR       +L + N +V S  V +V+
Sbjct: 108 LRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR-------DLAARNILVNSNLVCKVS 160
Query: 177 DFGLHEL-----RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVIL 231
           DFGL            E  S+G     R   W APE +    A  + T  +D +++ +++
Sbjct: 161 DFGLSRFLEENSSDPTETSSLGGKIPIR---WTAPEAI----AFRKFTSASDAWSYGIVM 213
Query: 232 HEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD-SCEPFVLACMRDCWAEAPESRPD 290
            E++     FG    ++   +D       +  L     C   +   M DCW +   +RP 
Sbjct: 214 WEVMS----FGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPR 269
Query: 291 FPTIRARLKHM 301
           FP + + L  M
Sbjct: 270 FPQVVSALDKM 280

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL-- 201
           +GM +L  S    H +L + N ++ +R ++++ DFGL  +R   +ND     Q +R +  
Sbjct: 122 EGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHXVMQEHRKVPF 178
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG--GCGLYEPKGEDCEEP 257
            W APE L+        +  +D + F V L E+   G+    G  G  +     ++ E  
Sbjct: 179 AWCAPESLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
            RP      + C   +   M  CWA  PE RP F  +R
Sbjct: 235 PRP------EDCPQDIYNVMVQCWAHKPEDRPTFVALR 266

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL-- 201
           +GM +L  S    H +L + N ++ +R ++++ DFGL  +R   +ND     Q +R +  
Sbjct: 132 EGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHXVMQEHRKVPF 188
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG--GCGLYEPKGEDCEEP 257
            W APE L+        +  +D + F V L E+   G+    G  G  +     ++ E  
Sbjct: 189 AWCAPESLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 244
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
            RP      + C   +   M  CWA  PE RP F  +R
Sbjct: 245 PRP------EDCPQDIYNVMVQCWAHKPEDRPTFVALR 276

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM +L  S    H +L + NC++  ++ ++V DFGL    +  E  S+ 
Sbjct: 135 LIGFGLQVAK-GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 192
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 193 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 249 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM +L  S    H +L + NC++  ++ ++V DFGL    +  E  S+ 
Sbjct: 154 LIGFGLQVAK-GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 211
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 212 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 267
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 268 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 310

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM +L  S    H +L + NC++  ++ ++V DFGL    +  E  S+ 
Sbjct: 134 LIGFGLQVAK-GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 191
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 192 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 247
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 248 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 290

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM +L  S    H +L + NC++  ++ ++V DFGL    +  E  S+ 
Sbjct: 132 LIGFGLQVAK-GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 189
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 190 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 245
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 246 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 288

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM +L       H +L + NC++  ++ ++V DFGL    +  E  S+ 
Sbjct: 153 LIGFGLQVAK-GMKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 210
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 211 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 266
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 267 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 309

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 116 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWT 172
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 173 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 211
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 212 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 260

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM +L  S    H +L + NC++  ++ ++V DFGL    +  E  S+ 
Sbjct: 130 LIGFGLQVAK-GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 187
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 188 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 243
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 244 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 286

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 123 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 179
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 180 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 218
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 219 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 126 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H ++ + N +V++   +++ DFGL   R+  ++      +    + W APE +       
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 567
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
           R T  +DV+ F V + EI+     PF G    +  G  E+ E  P  PN       C P 
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 620
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
           + + M  CWA  P  RP F  ++A+L
Sbjct: 621 LYSLMTKCWAYDPSRRPRFTELKAQL 646

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL-- 201
           +GM +L  S    H +L + N ++ +R ++++ DFGL  +R   +ND     Q +R +  
Sbjct: 126 EGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHYVMQEHRKVPF 182
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG--GCGLYEPKGEDCEEP 257
            W APE L+        +  +D + F V L E+   G+    G  G  +     ++ E  
Sbjct: 183 AWCAPESLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 238
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMM 317
            RP      + C   +   M  CWA  PE RP F  +R  L   +    + + D   E  
Sbjct: 239 PRP------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRALQD--FEEP 290
Query: 318 EKQKNIIDQMMEMMEKYANN 337
           +K    ++ ++ ++E  A N
Sbjct: 291 DKLHIQMNDVITVIEGRAEN 310

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM +L       H +L + NC++  ++ ++V DFGL    +  E  S+ 
Sbjct: 127 LIGFGLQVAK-GMKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 184
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 185 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 240
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 241 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 283

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS--L 201
           +GM +L  S    H +L + N ++ +R ++++ DFGL  +R   +ND     Q +R    
Sbjct: 122 EGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHYVMQEHRKVPF 178
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG--GCGLYEPKGEDCEEP 257
            W APE L+        +  +D + F V L E+   G+    G  G  +     ++ E  
Sbjct: 179 AWCAPESLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
            RP      + C   +   M  CWA  PE RP F  +R
Sbjct: 235 PRP------EDCPQDIYNVMVQCWAHKPEDRPTFVALR 266

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL-- 201
           +GM +L  S    H +L + N ++ +R ++++ DFGL  +R   +ND     Q +R +  
Sbjct: 126 EGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHYVMQEHRKVPF 182
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG--GCGLYEPKGEDCEEP 257
            W APE L+        +  +D + F V L E+   G+    G  G  +     ++ E  
Sbjct: 183 AWCAPESLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 238
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
            RP      + C   +   M  CWA  PE RP F  +R
Sbjct: 239 PRP------EDCPQDIYNVMVQCWAHKPEDRPTFVALR 270

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L+ FG  + + GM +L  S    H +L + NC++  ++ ++V DFGL    +  E  S+ 
Sbjct: 133 LIGFGLQVAK-GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 190
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
                +  + W A E L+      + T K+DV++F V+L E++ R  P           +
Sbjct: 191 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 246
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           Y  +G    +P         + C   +   M  CW    E RP F  + +R+
Sbjct: 247 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 289

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 119 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 175
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 176 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 214
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 215 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 263

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 292 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 348
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 349 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 387
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 388 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 292 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 348
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 349 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 387
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 388 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 126 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL-- 201
           +GM +L  S    H +L + N ++ +R ++++ DFGL  +R   +ND     Q +R +  
Sbjct: 122 EGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHYVMQEHRKVPF 178
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG--GCGLYEPKGEDCEEP 257
            W APE L+        +  +D + F V L E+   G+    G  G  +     ++ E  
Sbjct: 179 AWCAPESLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
            RP      + C   +   M  CWA  PE RP F  +R
Sbjct: 235 PRP------EDCPQDIYNVMVQCWAHKPEDRPTFVALR 266

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 292 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 348
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 349 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 387
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 388 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL-- 201
           +GM +L  S    H +L + N ++ +R ++++ DFGL  +R   +ND     Q +R +  
Sbjct: 132 EGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHYVMQEHRKVPF 188
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG--GCGLYEPKGEDCEEP 257
            W APE L+        +  +D + F V L E+   G+    G  G  +     ++ E  
Sbjct: 189 AWCAPESLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 244
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
            RP      + C   +   M  CWA  PE RP F  +R
Sbjct: 245 PRP------EDCPQDIYNVMVQCWAHKPEDRPTFVALR 276

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 126 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 123 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEWTARQGAKFPIKWT 179
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 180 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 218
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 219 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 126 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 117 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 173
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 174 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 212
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 213 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 261

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 375 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 431
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+               P   N
Sbjct: 432 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPY---------------PGMVN 470
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 471 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 115 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 171
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 172 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 210
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 211 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 259

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H ++ + N +V++   +++ DFGL   R+  ++      +    + W APE +       
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 187
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
           R T  +DV+ F V + EI+     PF G    +  G  E+ E  P  PN       C P 
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 240
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
           + + M  CWA  P  RP F  ++A+L
Sbjct: 241 LYSLMTKCWAYDPSRRPRFTELKAQL 266

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 47/177 (26%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H +L + N +V S   +++ DFGL +L    ++  +        + W APE L D     
Sbjct: 150 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF-- 207
Query: 217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR---------- 266
             ++++DV++F V+L+E+                   C++   P+ E LR          
Sbjct: 208 --SRQSDVWSFGVVLYELFTY----------------CDKSCSPSAEFLRMMGCERDVPA 249
Query: 267 -----------------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ 306
                             +C   V   M+ CWA +P+ RP F  +  +L  +  G +
Sbjct: 250 LSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 126 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 293 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLGRL--IEDNEYTARQGAKFPIKWT 349
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+               P   N
Sbjct: 350 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPY---------------PGMVN 388
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 389 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 437

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 126 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L+++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 126 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 47/177 (26%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H +L + N +V S   +++ DFGL +L    ++  +        + W APE L D     
Sbjct: 137 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF-- 194
Query: 217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR---------- 266
             ++++DV++F V+L+E+                   C++   P+ E LR          
Sbjct: 195 --SRQSDVWSFGVVLYELFTY----------------CDKSCSPSAEFLRMMGSERDVPA 236
Query: 267 -----------------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ 306
                             +C   V   M+ CWA +P+ RP F  +  +L  +  G +
Sbjct: 237 LSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 293

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 47/177 (26%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
           H +L + N +V S   +++ DFGL +L    ++  +        + W APE L D     
Sbjct: 138 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF-- 195
Query: 217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR---------- 266
             ++++DV++F V+L+E+                   C++   P+ E LR          
Sbjct: 196 --SRQSDVWSFGVVLYELFTY----------------CDKSCSPSAEFLRMMGCERDVPA 237
Query: 267 -----------------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ 306
                             +C   V   M+ CWA +P+ RP F  +  +L  +  G +
Sbjct: 238 LCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 294

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 120 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 177
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
              E +   E      + W A E +L   +     T ++DV+++ V + E++     P+ 
Sbjct: 178 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 231
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
           G    E      KGE   +P           C   V   MR CW    +SRP F  +   
Sbjct: 232 GIPASEISSILEKGERLPQP---------PICTIDVYMIMRKCWMIDADSRPKFRELIIE 282
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
              M    Q+ ++ Q  E M
Sbjct: 283 FSKMARDPQRYLVIQGDERM 302

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 113 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 170
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 171 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 223
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   MR CW    +SRP F  +  
Sbjct: 224 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMRKCWMIDADSRPKFRELII 274
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 275 EFSKMARDPQRYLVIQGDERM 295

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 25/187 (13%)
Query: 121 RIGIHSDIIIITY--LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDF 178
           R+    D+ ++T+  L+ F   + + GM FL       H +L + N +VT   V+++ DF
Sbjct: 159 RLEEEEDLNVLTFEDLLCFAYQVAK-GMEFLEFKSC-VHRDLAARNVLVTHGKVVKICDF 216
Query: 179 GLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR- 237
           GL      ++++ +        + W APE L +    I    K+DV+++ ++L EI    
Sbjct: 217 GLAR-DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI----KSDVWSYGILLWEIFSLG 271
Query: 238 RGPFGG----CGLYE--PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF 291
             P+ G       Y+    G   ++PF    E         +   M+ CWA     RP F
Sbjct: 272 VNPYPGIPVDANFYKLIQNGFKMDQPFYATEE---------IYIIMQSCWAFDSRKRPSF 322
Query: 292 PTIRARL 298
           P + + L
Sbjct: 323 PNLTSFL 329

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L  S    H +L + N ++ ++   +++DFGL +     EN    +      + W 
Sbjct: 123 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWY 181
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
           APE +       + + K+DV++F V++ E     + P+ G    E      KGE    P 
Sbjct: 182 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 236
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
                     C   +   M  CW    E+RP F  +  RL++
Sbjct: 237 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 270

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM ++ R     H +L ++N +V    V +V DFGL  L    +N+          + W 
Sbjct: 126 GMAYVERMNY-VHRDLAAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
           APE      A + G  T K+DV++F ++L E+  + R P+ G                 N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
            E+L       R  C P     + D    CW + PE RP F  ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 18/155 (11%)
Query: 145 GMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           GM +L  S +G  H +L + N ++ S  V +V+DFGL  +       +         + W
Sbjct: 136 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 193
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPFR 259
            APE +    A  + T  +DV+++ +++ E++     +G    +E   +D     EE +R
Sbjct: 194 TAPEAI----AFRKFTSASDVWSYGIVMWEVVS----YGERPYWEMTNQDVIKAVEEGYR 245
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
               +    C   +   M DCW +   SRP F  I
Sbjct: 246 LPSPM---DCPAALYQLMLDCWQKERNSRPKFDEI 277

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 24/195 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 167
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
              E +   E      + W A E +L   +     T ++DV+++ V + E++     P+ 
Sbjct: 168 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 221
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
           G    E      KGE   +P           C   V   MR CW    +SRP F  +   
Sbjct: 222 GIPASEISSILEKGERLPQP---------PICTIDVYMIMRKCWMIDADSRPKFRELIIE 272
Query: 298 LKHMKDGKQKNIIDQ 312
              M    Q+ ++ Q
Sbjct: 273 FSKMARDPQRYLVIQ 287

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L  S    H +L + N ++ ++   +++DFGL +     EN    +      + W 
Sbjct: 129 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 187
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
           APE +       + + K+DV++F V++ E     + P+ G    E      KGE    P 
Sbjct: 188 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 242
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
                     C   +   M  CW    E+RP F  +  RL++
Sbjct: 243 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 276

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L  S    H +L + N ++ ++   +++DFGL +     EN    +      + W 
Sbjct: 117 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 175
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
           APE +       + + K+DV++F V++ E     + P+ G    E      KGE    P 
Sbjct: 176 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 230
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
                     C   +   M  CW    E+RP F  +  RL++
Sbjct: 231 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 264

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L  S    H +L + N ++ ++   +++DFGL +     EN    +      + W 
Sbjct: 139 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
           APE +       + + K+DV++F V++ E     + P+ G    E      KGE    P 
Sbjct: 198 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 252
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
                     C   +   M  CW    E+RP F  +  RL++
Sbjct: 253 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 286

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L  S    H +L + N ++ ++   +++DFGL +     EN    +      + W 
Sbjct: 139 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
           APE +       + + K+DV++F V++ E     + P+ G    E      KGE    P 
Sbjct: 198 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 252
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
                     C   +   M  CW    E+RP F  +  RL++
Sbjct: 253 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 286

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 68/170 (40%), Gaps = 35/170 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L       H +L + NC++     + V DFGL        +  I    YYR     
Sbjct: 149 GMEYLSSRNF-IHRDLAARNCMLAEDMTVCVADFGL--------SRKIYSGDYYRQGCAS 199
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGL-----YEPKG 251
              + W A E L D       T  +DV+AF V + EI+ R + P+ G        Y   G
Sbjct: 200 KLPVKWLALESLADNLY----TVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG 255
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
              ++P           C   V   M  CW+  P+ RP F  +R  L+++
Sbjct: 256 NRLKQP---------PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L  S    H +L + N ++ ++   +++DFGL +     EN    +      + W 
Sbjct: 123 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 181
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
           APE +       + + K+DV++F V++ E     + P+ G    E      KGE    P 
Sbjct: 182 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 236
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
                     C   +   M  CW    E+RP F  +  RL++
Sbjct: 237 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 270

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L  S    H +L + N ++ ++   +++DFGL +     EN    +      + W 
Sbjct: 119 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 177
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
           APE +       + + K+DV++F V++ E     + P+ G    E      KGE    P 
Sbjct: 178 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 232
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
                     C   +   M  CW    E+RP F  +  RL++
Sbjct: 233 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 266

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L  S    H +L + N ++ ++   +++DFGL +     EN    +      + W 
Sbjct: 137 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 195
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
           APE +       + + K+DV++F V++ E     + P+ G    E      KGE    P 
Sbjct: 196 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 250
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
                     C   +   M  CW    E+RP F  +  RL++
Sbjct: 251 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 284

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 22/194 (11%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I    L+N+   I + GM +L    +  H +L + N +V S   +++TDFGL  L 
Sbjct: 133 HKDNIGSQLLLNWCVQIAK-GMMYLEERRL-VHRDLAARNVLVKSPNHVKITDFGLARLL 190
Query: 185 HCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGG 243
              E +   +      + W A E +       + T ++DV+++ V + E++   G P+ G
Sbjct: 191 EGDEKEYNADGGKM-PIKWMALECIHYR----KFTHQSDVWSYGVTIWELMTFGGKPYDG 245
Query: 244 CGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
               E      KGE   +P           C   V   M  CW    +SRP F  + A  
Sbjct: 246 IPTREIPDLLEKGERLPQP---------PICTIDVYMVMVKCWMIDADSRPKFKELAAEF 296
Query: 299 KHMKDGKQKNIIDQ 312
             M    Q+ ++ Q
Sbjct: 297 SRMARDPQRYLVIQ 310

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 67/170 (39%), Gaps = 35/170 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
           GM +L       H +L + NC++     + V DFGL        +  I    YYR     
Sbjct: 159 GMEYLSNRNF-LHRDLAARNCMLRDDMTVCVADFGL--------SKKIYSGDYYRQGRIA 209
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEP-----KG 251
              + W A E L D       T K+DV+AF V + EI  R   P+ G   +E       G
Sbjct: 210 KMPVKWIAIESLADRVY----TSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG 265
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
              ++P         + C   +   M  CW   P  RP F  +R +L+ +
Sbjct: 266 HRLKQP---------EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 22/194 (11%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I    L+N+   I + GM +L    +  H +L + N +V S   +++TDFGL  L 
Sbjct: 110 HKDNIGSQLLLNWCVQIAK-GMMYLEERRL-VHRDLAARNVLVKSPNHVKITDFGLARLL 167
Query: 185 HCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGG 243
              E +   +      + W A E +       + T ++DV+++ V + E++   G P+ G
Sbjct: 168 EGDEKEYNADGGKM-PIKWMALECIHYR----KFTHQSDVWSYGVTIWELMTFGGKPYDG 222
Query: 244 CGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
               E      KGE   +P           C   V   M  CW    +SRP F  + A  
Sbjct: 223 IPTREIPDLLEKGERLPQP---------PICTIDVYMVMVKCWMIDADSRPKFKELAAEF 273
Query: 299 KHMKDGKQKNIIDQ 312
             M    Q+ ++ Q
Sbjct: 274 SRMARDPQRYLVIQ 287

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L  S    H +L + N ++ ++   +++DFGL +     EN    +      + W 
Sbjct: 482 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 540
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
           APE +       + + K+DV++F V++ E     + P+ G    E      KGE    P 
Sbjct: 541 APECINY----YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 595
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
                     C   +   M  CW    E+RP F  +  RL++
Sbjct: 596 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 629

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 144 QGMTFLH--RSPIGCHGNLKSSNCV-VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS 200
           QG+ +LH  +     H +LK  N + V    VL++ DFG          ++ G      S
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG------S 167
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE---DCEEP 257
             W APE+   ++     ++K DV+++ +IL E+I RR PF   G   P           
Sbjct: 168 AAWMAPEVFEGSNY----SEKCDVFSWGIILWEVITRRKPFDEIG--GPAFRIMWAVHNG 221
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            RP   L+++  +P + + M  CW++ P  RP    I   + H+
Sbjct: 222 TRP--PLIKNLPKP-IESLMTRCWSKDPSQRPSMEEIVKIMTHL 262

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L  S    H +L + N ++ ++   +++DFGL +     EN    +      + W 
Sbjct: 481 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 539
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
           APE +       + + K+DV++F V++ E     + P+ G    E      KGE    P 
Sbjct: 540 APECINY----YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 594
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
                     C   +   M  CW    E+RP F  +  RL++
Sbjct: 595 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 628

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 203 WKAPELLR----DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF 258
           W APE L+    DT+      + AD+++FAV+L E++ R  PF      E   +   E  
Sbjct: 174 WVAPEALQKKPEDTN-----RRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGL 228
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
           RP +        P V   M+ C  E P  RP F  I   L+ M+D
Sbjct: 229 RPTIP---PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 144 QGMTFLH--RSPIGCHGNLKSSNCV-VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS 200
           QG+ +LH  +     H +LK  N + V    VL++ DFG          ++ G      S
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG------S 166
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE---DCEEP 257
             W APE+   ++     ++K DV+++ +IL E+I RR PF   G   P           
Sbjct: 167 AAWMAPEVFEGSNY----SEKCDVFSWGIILWEVITRRKPFDEIG--GPAFRIMWAVHNG 220
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            RP   L+++  +P + + M  CW++ P  RP    I   + H+
Sbjct: 221 TRP--PLIKNLPKP-IESLMTRCWSKDPSQRPSMEEIVKIMTHL 261

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFG  +L 
Sbjct: 112 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLL 169
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 170 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 222
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   MR CW    +SRP F  +  
Sbjct: 223 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMRKCWMIDADSRPKFRELII 273
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 274 EFSKMARDPQRYLVIQGDERM 294

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFG  +L 
Sbjct: 112 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLL 169
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 170 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 222
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   MR CW    +SRP F  +  
Sbjct: 223 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMRKCWMIDADSRPKFRELII 273
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 274 EFSKMARDPQRYLVIQGDERM 294

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
            GM +L  S +G  H +L + N ++ S  V +V+DFGL  +       +         + 
Sbjct: 156 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 213
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
           W +PE +    A  + T  +DV+++ ++L E++     +G    +E   +D     +E +
Sbjct: 214 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 265
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           R  P ++     C   +   M DCW +   +RP F  I + L  +
Sbjct: 266 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
            GM +L  S +G  H +L + N ++ S  V +V+DFGL  +       +         + 
Sbjct: 158 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
           W +PE +    A  + T  +DV+++ ++L E++     +G    +E   +D     +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           R  P ++     C   +   M DCW +   +RP F  I + L  +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 144 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 201
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
              E +   E      + W A E +L   +     T ++DV+++ V + E++     P+ 
Sbjct: 202 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 255
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
           G    E      KGE   +P           C   V   M  CW    +SRP F  +   
Sbjct: 256 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 306
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
              M    Q+ ++ Q  E M
Sbjct: 307 FSKMARDPQRYLVIQGDERM 326

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
            GM +L  S +G  H +L + N ++ S  V +V+DFGL  +       +         + 
Sbjct: 129 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
           W +PE +    A  + T  +DV+++ ++L E++     +G    +E   +D     +E +
Sbjct: 187 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 238
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           R  P ++     C   +   M DCW +   +RP F  I + L  +
Sbjct: 239 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
            GM +L  S +G  H +L + N ++ S  V +V+DFGL  +       +         + 
Sbjct: 129 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
           W +PE +    A  + T  +DV+++ ++L E++     +G    +E   +D     +E +
Sbjct: 187 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 238
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           R  P ++     C   +   M DCW +   +RP F  I + L  +
Sbjct: 239 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 167
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
              E +   E      + W A E +L   +     T ++DV+++ V + E++     P+ 
Sbjct: 168 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 221
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
           G    E      KGE   +P           C   V   M  CW    +SRP F  +   
Sbjct: 222 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 272
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
              M    Q+ ++ Q  E M
Sbjct: 273 FSKMARDPQRYLVIQGDERM 292

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
            GM +L  S +G  H +L + N ++ S  V +V+DFGL  +       +         + 
Sbjct: 158 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
           W +PE +    A  + T  +DV+++ ++L E++     +G    +E   +D     +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           R  P ++     C   +   M DCW +   +RP F  I + L  +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
            GM +L  S +G  H +L + N ++ S  V +V+DFGL  +       +         + 
Sbjct: 146 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 203
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
           W +PE +    A  + T  +DV+++ ++L E++     +G    +E   +D     +E +
Sbjct: 204 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 255
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           R  P ++     C   +   M DCW +   +RP F  I + L  +
Sbjct: 256 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
            GM +L  S +G  H +L + N ++ S  V +V+DFGL  +       +         + 
Sbjct: 158 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
           W +PE +    A  + T  +DV+++ ++L E++     +G    +E   +D     +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           R  P ++     C   +   M DCW +   +RP F  I + L  +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
            GM +L  S +G  H +L + N ++ S  V +V+DFGL  +       +         + 
Sbjct: 158 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
           W +PE +    A  + T  +DV+++ ++L E++     +G    +E   +D     +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           R  P ++     C   +   M DCW +   +RP F  I + L  +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
            GM +L  S +G  H +L + N ++ S  V +V+DFGL  +       +         + 
Sbjct: 158 SGMKYL--SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
           W +PE +    A  + T  +DV+++ ++L E++     +G    +E   +D     +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           R  P ++     C   +   M DCW +   +RP F  I + L  +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 111 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 168
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
              E +   E      + W A E +L   +     T ++DV+++ V + E++     P+ 
Sbjct: 169 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 222
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
           G    E      KGE   +P           C   V   M  CW    +SRP F  +   
Sbjct: 223 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 273
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
              M    Q+ ++ Q  E M
Sbjct: 274 FSKMARDPQRYLVIQGDERM 293

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 117 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 174
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 175 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 227
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   M  CW    +SRP F  +  
Sbjct: 228 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 278
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 279 EFSKMARDPQRYLVIQGDERM 299

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
            GM +L  S +G  H +L + N ++ S  V +V+DFGL  +       +         + 
Sbjct: 158 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
           W +PE +    A  + T  +DV+++ ++L E++     +G    +E   +D     +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           R  P ++     C   +   M DCW +   +RP F  I + L  +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 117 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 174
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 175 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 227
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   M  CW    +SRP F  +  
Sbjct: 228 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 278
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 279 EFSKMARDPQRYLVIQGDERM 299

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 117 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 174
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 175 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 227
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   M  CW    +SRP F  +  
Sbjct: 228 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 278
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 279 EFSKMARDPQRYLVIQGDERM 299

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 113 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 170
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 171 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 223
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   M  CW    +SRP F  +  
Sbjct: 224 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 274
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 275 EFSKMARDPQRYLVIQGDERM 295

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 167
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
              E +   E      + W A E +L   +     T ++DV+++ V + E++     P+ 
Sbjct: 168 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 221
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
           G    E      KGE   +P           C   V   M  CW    +SRP F  +   
Sbjct: 222 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 272
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
              M    Q+ ++ Q  E M
Sbjct: 273 FSKMARDPQRYLVIQGDERM 292

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 114 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 171
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
              E +   E      + W A E +L   +     T ++DV+++ V + E++     P+ 
Sbjct: 172 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 225
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
           G    E      KGE   +P           C   V   M  CW    +SRP F  +   
Sbjct: 226 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 276
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
              M    Q+ ++ Q  E M
Sbjct: 277 FSKMARDPQRYLVIQGDERM 296

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 116 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 173
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 174 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 226
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   M  CW    +SRP F  +  
Sbjct: 227 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 277
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 278 EFSKMARDPQRYLVIQGDERM 298

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 113 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 170
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 171 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 223
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   M  CW    +SRP F  +  
Sbjct: 224 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 274
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 275 EFSKMARDPQRYLVIQGDERM 295

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
            GM +L  S +G  H +L + N ++ S  V +V+DFGL  +       +         + 
Sbjct: 158 SGMKYL--SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
           W +PE +    A  + T  +DV+++ ++L E++     +G    +E   +D     +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           R  P ++     C   +   M DCW +   +RP F  I + L  +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 112 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 169
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 170 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 222
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   M  CW    +SRP F  +  
Sbjct: 223 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 273
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 274 EFSKMARDPQRYLVIQGDERM 294

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 167
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
              E +   E      + W A E +L   +     T ++DV+++ V + E++     P+ 
Sbjct: 168 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 221
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
           G    E      KGE   +P           C   V   M  CW    +SRP F  +   
Sbjct: 222 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 272
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
              M    Q+ ++ Q  E M
Sbjct: 273 FSKMARDPQRYLVIQGDERM 292

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 167
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
              E +   E      + W A E +L   +     T ++DV+++ V + E++     P+ 
Sbjct: 168 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 221
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
           G    E      KGE   +P           C   V   M  CW    +SRP F  +   
Sbjct: 222 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 272
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
              M    Q+ ++ Q  E M
Sbjct: 273 FSKMARDPQRYLVIQGDERM 292

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 112 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 169
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 170 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 222
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   M  CW    +SRP F  +  
Sbjct: 223 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 273
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 274 EFSKMARDPQRYLVIQGDERM 294

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 135 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 192
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 193 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 245
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   M  CW    +SRP F  +  
Sbjct: 246 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 296
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 297 EFSKMARDPQRYLVIQGDERM 317

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 111 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 168
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
              E +   E      + W A E +L   +     T ++DV+++ V + E++     P+ 
Sbjct: 169 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 222
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
           G    E      KGE   +P           C   V   M  CW    +SRP F  +   
Sbjct: 223 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 273
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
              M    Q+ ++ Q  E M
Sbjct: 274 FSKMARDPQRYLVIQGDERM 293

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 14/157 (8%)
Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           + M +L    I C H ++   N +V S   +++ DFGL   R+  + D          + 
Sbjct: 136 KAMAYLES--INCVHRDIAVRNILVASPECVKLGDFGLS--RYIEDEDYYKASVTRLPIK 191
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
           W +PE +       R T  +DV+ FAV + EI+     FG    +  + +D         
Sbjct: 192 WMSPESINFR----RFTTASDVWMFAVCMWEILS----FGKQPFFWLENKDVIGVLEKGD 243
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
            L + D C P +   M  CW   P  RP F  +   L
Sbjct: 244 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 280

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 14/157 (8%)
Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           + M +L    I C H ++   N +V S   +++ DFGL   R+  + D          + 
Sbjct: 124 KAMAYLES--INCVHRDIAVRNILVASPECVKLGDFGLS--RYIEDEDYYKASVTRLPIK 179
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
           W +PE +       R T  +DV+ FAV + EI+     FG    +  + +D         
Sbjct: 180 WMSPESINFR----RFTTASDVWMFAVCMWEILS----FGKQPFFWLENKDVIGVLEKGD 231
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
            L + D C P +   M  CW   P  RP F  +   L
Sbjct: 232 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 113 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 170
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 171 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 223
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   M  CW    +SRP F  +  
Sbjct: 224 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 274
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 275 EFSKMARDPQRYLVIQGDERM 295

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
            GM +L  S +G  H +L + N ++ S  V +V+DFGL  +       +         + 
Sbjct: 158 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
           W +PE +    A  + T  +DV+++ ++L E++     +G    +E   +D     +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           R  P ++     C   +   M DCW +   +RP F  I + L  +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 104 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 161
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
              E +   E      + W A E +L   +     T ++DV+++ V + E++     P+ 
Sbjct: 162 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 215
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
           G    E      KGE   +P           C   V   M  CW    +SRP F  +   
Sbjct: 216 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 266
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
              M    Q+ ++ Q  E M
Sbjct: 267 FSKMARDPQRYLVIQGDERM 286

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 14/157 (8%)
Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           + M +L    I C H ++   N +V S   +++ DFGL   R+  + D          + 
Sbjct: 120 KAMAYLES--INCVHRDIAVRNILVASPECVKLGDFGLS--RYIEDEDYYKASVTRLPIK 175
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
           W +PE +       R T  +DV+ FAV + EI+     FG    +  + +D         
Sbjct: 176 WMSPESINFR----RFTTASDVWMFAVCMWEILS----FGKQPFFWLENKDVIGVLEKGD 227
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
            L + D C P +   M  CW   P  RP F  +   L
Sbjct: 228 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 264

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
            GM +L  S +G  H +L + N ++ S  V +V+DFGL  +       +         + 
Sbjct: 158 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
           W +PE +    A  + T  +DV+++ ++L E++     +G    +E   +D     +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           R  P ++     C   +   M DCW +   +RP F  I + L  +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I  +GM +L    +  H +L + N +V +   +++TDFGL +L 
Sbjct: 107 HKDNIGSQYLLNWCVQIA-EGMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 164
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
              E +   E      + W A E +L   +     T ++DV+++ V + E++     P+ 
Sbjct: 165 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 218
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
           G    E      KGE   +P           C   V   M  CW    +SRP F  +   
Sbjct: 219 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 269
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
              M    Q+ ++ Q  E M
Sbjct: 270 FSKMARDPQRYLVIQGDERM 289

>pdb|3UVJ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Heterodimeric Human Soluble Guanylate Cyclase 1. Length = 225

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEER 47
           MPRYCLFG+ V  A++ ES   P +I++SP     L    G++   R
Sbjct: 126 MPRYCLFGNNVTLANKFESCSVPRKINVSPTTYRLLKDCPGFVFTPR 172

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSLLWKAPELLRD 211
           P   H +LKS N +V       + D GL  +   + N   +G +    +  + APE+L +
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191
Query: 212 THAP--IRGTQKADVYAFAVILHEIIGR----------RGPFGGCGLYEPKGED-----C 254
           T         ++ D++AF ++L E+  R          + PF      +P  ED     C
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVC 251
Query: 255 EEPFRPNL--ELLRDSCEPFVLACMRDCWAEAPESR 288
            +  RPN+      D     +   M++CW + P +R
Sbjct: 252 VDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSLLWKAPELLRD 211
           P   H +LKS N +V       + D GL  +   + N   +G +    +  + APE+L +
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191
Query: 212 THAP--IRGTQKADVYAFAVILHEIIGR----------RGPFGGCGLYEPKGED-----C 254
           T         ++ D++AF ++L E+  R          + PF      +P  ED     C
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVC 251
Query: 255 EEPFRPNL--ELLRDSCEPFVLACMRDCWAEAPESR 288
            +  RPN+      D     +   M++CW + P +R
Sbjct: 252 VDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSLLWKAPELLRD 211
           P   H +LKS N +V       + D GL  +   + N   +G +    +  + APE+L +
Sbjct: 161 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 220
Query: 212 THAP--IRGTQKADVYAFAVILHEIIGR----------RGPFGGCGLYEPKGED-----C 254
           T         ++ D++AF ++L E+  R          + PF      +P  ED     C
Sbjct: 221 TIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVC 280
Query: 255 EEPFRPNL--ELLRDSCEPFVLACMRDCWAEAPESR 288
            +  RPN+      D     +   M++CW + P +R
Sbjct: 281 VDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 316

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 11/158 (6%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L  S    H +L + NC+V    ++++ DFG+    +  +   +G H     + W 
Sbjct: 140 GMVYL-ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML-PIRWM 197
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLEL 264
            PE +       + T ++DV++  V+L EI      +G    Y+    +  E       L
Sbjct: 198 PPESIMYR----KFTTESDVWSLGVVLWEIF----TYGKQPWYQLSNNEVIECITQGRVL 249
Query: 265 LR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            R  +C   V   M  CW   P  R +   I   L+++
Sbjct: 250 QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 32/214 (14%)
Query: 110 IAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS 169
           + + P  +L+  +  H + I    L+ +   I + GM +L       H NL + N +V +
Sbjct: 93  MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK-GMEYLGTKRY-IHRNLATRNILVEN 150
Query: 170 RWVLQVTDFGLHELRHCAENDSIGEHQYYR-------SLLWKAPELLRDTHAPIRGTQKA 222
              +++ DFGL ++          + +YY+        + W APE L ++   +     +
Sbjct: 151 ENRVKIGDFGLTKVLP-------QDKEYYKVKEPGESPIFWYAPESLTESKFSV----AS 199
Query: 223 DVYAFAVILHEIIG--RRGPFGGCGLYEPKGEDCE---------EPFRPNLELLR-DSCE 270
           DV++F V+L+E+     +            G D +         E  + N  L R D C 
Sbjct: 200 DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCP 259
Query: 271 PFVLACMRDCWAEAPESRPDFPTIRARLKHMKDG 304
             +   M +CW      RP F  +  R+  ++D 
Sbjct: 260 DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 293

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 11/151 (7%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L  S    H +L + NC+V +  ++++ DFG+    +  +   +G H     + W 
Sbjct: 145 GMVYL-ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML-PIRWM 202
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLEL 264
            PE +       + T ++DV++F VIL EI      +G    ++    +  E       L
Sbjct: 203 PPESIMYR----KFTTESDVWSFGVILWEIF----TYGKQPWFQLSNTEVIECITQGRVL 254
Query: 265 LRDS-CEPFVLACMRDCWAEAPESRPDFPTI 294
            R   C   V   M  CW   P+ R +   I
Sbjct: 255 ERPRVCPKEVYDVMLGCWQREPQQRLNIKEI 285

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 156 CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-----LLWKAPELLR 210
            H +L + N +V S  V +V+DFGL  +    E+D   E  Y  S     + W APE + 
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRV---LEDDP--EATYTTSGGKIPIRWTAPEAIS 223
Query: 211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD-SC 269
                 + T  +DV++F +++ E++     +G    +E    +  +       L     C
Sbjct: 224 YR----KFTSASDVWSFGIVMWEVM----TYGERPYWELSNHEVMKAINDGFRLPTPMDC 275
Query: 270 EPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
              +   M  CW +    RP F  I + L  +
Sbjct: 276 PSAIYQLMMQCWQQERARRPKFADIVSILDKL 307

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 19/153 (12%)
Query: 156 CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL------LWKAPELL 209
            H +L + N +V S  V +V+DFGL         D   +  Y  +L       W APE +
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLE----DDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD-S 268
           +      + T  +DV+++ +++ E++     +G    ++   +D       +  L     
Sbjct: 213 QYR----KFTSASDVWSYGIVMWEVMS----YGERPYWDMTNQDVINAIEQDYRLPPPMD 264
Query: 269 CEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           C   +   M DCW +    RP F  I   L  M
Sbjct: 265 CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 36/168 (21%)
Query: 146 MTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL---- 201
           M ++HR+       L + N +V S  V +V+DFGL         D   +  Y  +L    
Sbjct: 128 MNYVHRA-------LAARNILVNSNLVCKVSDFGLSRFLE----DDTSDPTYTSALGGKI 176
Query: 202 --LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC----E 255
              W APE ++      + T  +DV+++ +++ E++     +G    ++   +D     E
Sbjct: 177 PIRWTAPEAIQYR----KFTSASDVWSYGIVMWEVMS----YGERPYWDMTNQDVINAIE 228
Query: 256 EPFR--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           + +R  P ++     C   +   M DCW +    RP F  I   L  M
Sbjct: 229 QDYRLPPPMD-----CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 123 GIHSDIIIITYLMNFGDGIPR-QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH 181
           G  + I ++  L   G G+     M+++HR       +L + N +V S  V +V+DFG+ 
Sbjct: 111 GRFTVIQLVGMLRGIGSGMKYLSDMSYVHR-------DLAARNILVNSNLVCKVSDFGMS 163
Query: 182 ELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
            +       +         + W APE +    A  + T  +DV+++ +++ E++     +
Sbjct: 164 RVLEDDPEAAYTTRGGKIPIRWTAPEAI----AYRKFTSASDVWSYGIVMWEVMS----Y 215
Query: 242 GGCGLYEPKGEDC----EEPFR--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
           G    ++   +D     EE +R  P ++     C   +   M DCW +    RP F  I
Sbjct: 216 GERPYWDMSNQDVIKAIEEGYRLPPPMD-----CPIALHQLMLDCWQKERSDRPKFGQI 269

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 123 GIHSDIIIITYLMNFGDGIPR-QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH 181
           G  + I ++  L   G G+     M+++HR       +L + N +V S  V +V+DFG+ 
Sbjct: 105 GRFTVIQLVGMLRGIGSGMKYLSDMSYVHR-------DLAARNILVNSNLVCKVSDFGMS 157
Query: 182 ELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
            +       +         + W APE +    A  + T  +DV+++ +++ E++     +
Sbjct: 158 RVLEDDPEAAYTTRGGKIPIRWTAPEAI----AYRKFTSASDVWSYGIVMWEVMS----Y 209
Query: 242 GGCGLYEPKGEDC----EEPFR--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
           G    ++   +D     EE +R  P ++     C   +   M DCW +    RP F  I
Sbjct: 210 GERPYWDMSNQDVIKAIEEGYRLPPPMD-----CPIALHQLMLDCWQKERSDRPKFGQI 263

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 39/208 (18%)
Query: 100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGN 159
           +LLD V+ H+ A  PQ                  L+N+G  I + GM +L    +  H N
Sbjct: 100 SLLDHVRQHRGALGPQ-----------------LLLNWGVQIAK-GMYYLEEHGM-VHRN 140
Query: 160 LKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGT 219
           L + N ++ S   +QV DFG+ +L    ++  +   +    + W A E +       + T
Sbjct: 141 LAARNVLLKSPSQVQVADFGVADLL-PPDDKQLLYSEAKTPIKWMALESIHFG----KYT 195
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
            ++DV+++ V + E++     P+ G  L E      KGE   +P           C   V
Sbjct: 196 HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP---------QICTIDV 246
Query: 274 LACMRDCWAEAPESRPDFPTIRARLKHM 301
              M  CW      RP F  +      M
Sbjct: 247 YMVMVKCWMIDENIRPTFKELANEFTRM 274

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFG  +L 
Sbjct: 117 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLL 174
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 175 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 227
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   M  CW    +SRP F  +  
Sbjct: 228 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 278
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 279 EFSKMARDPQRYLVIQGDERM 299

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 24/191 (12%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
           +H P+E L  R            L++F   +  QGM FL  S    H ++ + N ++T+ 
Sbjct: 156 SHNPEEQLSSRD-----------LLHFSSQVA-QGMAFL-ASKNCIHRDVAARNVLLTNG 202
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVI 230
            V ++ DFGL       +++ I +      + W APE + D       T ++DV+++ ++
Sbjct: 203 HVAKIGDFGLAR-DIMNDSNYIVKGNARLPVKWMAPESIFDCVY----TVQSDVWSYGIL 257
Query: 231 LHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEP-FVLACMRDCWAEAPESR 288
           L EI      P+ G  +         +  +   ++ + +  P  + + M+ CWA  P  R
Sbjct: 258 LWEIFSLGLNPYPGILV----NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHR 313
Query: 289 PDFPTIRARLK 299
           P F  I + L+
Sbjct: 314 PTFQQICSFLQ 324

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 50/184 (27%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGE-HQYYR--- 199
           +GM +LH S    H NL + N ++ +  ++++ DFGL +        ++ E H+YYR   
Sbjct: 128 EGMAYLH-SQHYIHRNLAARNVLLDNDRLVKIGDFGLAK--------AVPEGHEYYRVRE 178
Query: 200 ----SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR------------------ 237
                + W APE L++     +    +DV++F V L+E++                    
Sbjct: 179 DGDSPVFWYAPECLKE----YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA 234
Query: 238 RGPFGGCGLYE--PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
           +G      L E   +GE    P         D C   V   M++CW      RP F  + 
Sbjct: 235 QGQMTVLRLTELLERGERLPRP---------DKCPCEVYHLMKNCWETEASFRPTFENLI 285
Query: 296 ARLK 299
             LK
Sbjct: 286 PILK 289

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            G+ FLH +    H ++KS+N ++   +  +++DFGL          ++   +   +  +
Sbjct: 144 NGINFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-TVMXSRIVGTTAY 201
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII 235
            APE LR    P     K+D+Y+F V+L EII
Sbjct: 202 MAPEALRGEITP-----KSDIYSFGVVLLEII 228

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW- 203
           G+ ++HR+ I  H ++K++N ++T   VL++ DFGL      A+N     +      LW 
Sbjct: 137 GLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 204 KAPELL---RDTHAPIRGTQKADVYAFAVILHEIIGR 237
           + PELL   RD   PI      D++    I+ E+  R
Sbjct: 196 RPPELLLGERDYGPPI------DLWGAGCIMAEMWTR 226

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 39/208 (18%)
Query: 100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGN 159
           +LLD V+ H+ A  PQ                  L+N+G  I + GM +L    +  H N
Sbjct: 118 SLLDHVRQHRGALGPQ-----------------LLLNWGVQIAK-GMYYLEEHGM-VHRN 158
Query: 160 LKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGT 219
           L + N ++ S   +QV DFG+ +L    ++  +   +    + W A E +       + T
Sbjct: 159 LAARNVLLKSPSQVQVADFGVADLL-PPDDKQLLYSEAKTPIKWMALESIHFG----KYT 213
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
            ++DV+++ V + E++     P+ G  L E      KGE   +P           C   V
Sbjct: 214 HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP---------QICTIDV 264
Query: 274 LACMRDCWAEAPESRPDFPTIRARLKHM 301
              M  CW      RP F  +      M
Sbjct: 265 YMVMVKCWMIDENIRPTFKELANEFTRM 292

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            G+ FLH +    H ++KS+N ++   +  +++DFGL          ++   +   +  +
Sbjct: 144 NGINFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-TVMXXRIVGTTAY 201
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII 235
            APE LR    P     K+D+Y+F V+L EII
Sbjct: 202 MAPEALRGEITP-----KSDIYSFGVVLLEII 228

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFG  +L 
Sbjct: 114 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLL 171
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
              E +   E      + W A E +L   +     T ++DV+++ V + E++     P+ 
Sbjct: 172 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 225
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
           G    E      KGE   +P           C   V   M  CW    +SRP F  +   
Sbjct: 226 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 276
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
              M    Q+ ++ Q  E M
Sbjct: 277 FSKMARDPQRYLVIQGDERM 296

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFG  +L 
Sbjct: 112 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLL 169
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
              E +   E      + W A E +L   +     T ++DV+++ V + E++  G + P+
Sbjct: 170 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 222
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
            G    E      KGE   +P           C   V   M  CW    +SRP F  +  
Sbjct: 223 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 273
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
               M    Q+ ++ Q  E M
Sbjct: 274 EFSKMARDPQRYLVIQGDERM 294

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            G+ ++HR+ I  H ++K++N ++T   VL++ DFGL      A+N     +      LW
Sbjct: 136 NGLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 204 -KAPELL---RDTHAPIRGTQKADVYAFAVILHEIIGR 237
            + PELL   RD   PI      D++    I+ E+  R
Sbjct: 195 YRPPELLLGERDYGPPI------DLWGAGCIMAEMWTR 226

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            G+ FLH +    H ++KS+N ++   +  +++DFGL           +   +   +  +
Sbjct: 135 NGINFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-XVXXSRIVGTTAY 192
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII 235
            APE LR    P     K+D+Y+F V+L EII
Sbjct: 193 XAPEALRGEITP-----KSDIYSFGVVLLEII 219

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            G+ ++HR+ I  H ++K++N ++T   VL++ DFGL      A+N     +      LW
Sbjct: 136 NGLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 204 -KAPELL---RDTHAPIRGTQKADVYAFAVILHEIIGR 237
            + PELL   RD   PI      D++    I+ E+  R
Sbjct: 195 YRPPELLLGERDYGPPI------DLWGAGCIMAEMWTR 226

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
           H D I   YL+N+   I + GM +L    +  H +L + N +V +   +++TDFG  +L 
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLL 167
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
              E +   E      + W A E +L   +     T ++DV+++ V + E++     P+ 
Sbjct: 168 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 221
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
           G    E      KGE   +P           C   V   M  CW    +SRP F  +   
Sbjct: 222 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 272
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
              M    Q+ ++ Q  E M
Sbjct: 273 FSKMARDPQRYLVIQGDERM 292

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            G+ ++HR+ I  H ++K++N ++T   VL++ DFGL      A+N     +      LW
Sbjct: 135 NGLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 193
Query: 204 -KAPELL---RDTHAPIRGTQKADVYAFAVILHEIIGR 237
            + PELL   RD   PI      D++    I+ E+  R
Sbjct: 194 YRPPELLLGERDYGPPI------DLWGAGCIMAEMWTR 225

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-----LLWKAPELLRD 211
           H +L + N +V S  V +V+DFGL  +    E+D   E  Y  +     + W APE ++ 
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRV---IEDDP--EAVYTTTGGKIPVRWTAPEAIQY 222
Query: 212 THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC----EEPFRPNLELLRD 267
                + T  +DV+++ +++ E++     +G    ++   +D     EE +R    +   
Sbjct: 223 R----KFTSASDVWSYGIVMWEVMS----YGERPYWDMSNQDVIKAIEEGYRLPAPM--- 271
Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            C   +   M DCW +    RP F  I   L  M
Sbjct: 272 DCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGLHEL--RHCAENDSIGEHQYYR 199
           G+T++H+  I  H +LK  N ++ S+     +++ DFGL     ++    D IG   Y  
Sbjct: 133 GITYMHKHNI-VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI- 190
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
                APE+LR T+      +K DV++  VIL+ ++    PF G   Y+
Sbjct: 191 -----APEVLRGTY-----DEKCDVWSAGVILYILLSGTPPFYGKNEYD 229

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 20/156 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           GM +L       H +L + N +V S  V +V+DFG+  +       +         + W 
Sbjct: 143 GMKYLSDMS-AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT 201
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC----EEPFR- 259
           APE +    A  + T  +DV+++ +++ E++     +G    ++   +D     EE +R 
Sbjct: 202 APEAI----AYRKFTSASDVWSYGIVMWEVMS----YGERPYWDMSNQDVIKAIEEGYRL 253
Query: 260 -PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
            P ++     C   +   M DCW +    RP F  I
Sbjct: 254 PPPMD-----CPIALHQLMLDCWQKERSDRPKFGQI 284

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 50/184 (27%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGE-HQYYR--- 199
           +GM +LH      H NL + N ++ +  ++++ DFGL +        ++ E H+YYR   
Sbjct: 128 EGMAYLHAQHY-IHRNLAARNVLLDNDRLVKIGDFGLAK--------AVPEGHEYYRVRE 178
Query: 200 ----SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR------------------ 237
                + W APE L++     +    +DV++F V L+E++                    
Sbjct: 179 DGDSPVFWYAPECLKE----YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA 234
Query: 238 RGPFGGCGLYE--PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
           +G      L E   +GE    P         D C   V   M++CW      RP F  + 
Sbjct: 235 QGQMTVLRLTELLERGERLPRP---------DKCPCEVYHLMKNCWETEASFRPTFENLI 285
Query: 296 ARLK 299
             LK
Sbjct: 286 PILK 289

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            G+ FLH +    H ++KS+N ++   +  +++DFGL           +   +   +  +
Sbjct: 138 NGINFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-XVMXXRIVGTTAY 195
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII 235
            APE LR    P     K+D+Y+F V+L EII
Sbjct: 196 MAPEALRGEITP-----KSDIYSFGVVLLEII 222

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGLHELRHCAEN--DSIGEHQYYR 199
           G+T++H++ I  H +LK  N ++ S+     +++ DFGL      ++   D IG   Y  
Sbjct: 138 GITYMHKNKI-VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI- 195
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
                APE+L  T+      +K DV++  VIL+ ++    PF G   Y+
Sbjct: 196 -----APEVLHGTY-----DEKCDVWSTGVILYILLSGCPPFNGANEYD 234

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCAEN--DSIGEHQYYR 199
           G+T+LH+  I  H +LK  N ++ S+    ++++ DFGL  +    +   + +G   Y  
Sbjct: 148 GVTYLHKHNI-VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYI- 205
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
                APE+LR  +      +K DV++  VIL  ++    PFGG
Sbjct: 206 -----APEVLRKKY-----DEKCDVWSIGVILFILLAGYPPFGG 239

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L++F   +  QGM FL  S    H ++ + N ++T+  V ++ DFGL       +++ I 
Sbjct: 166 LLHFSSQVA-QGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIV 222
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGE 252
           +      + W APE + D       T ++DV+++ ++L EI      P+ G  +      
Sbjct: 223 KGNARLPVKWMAPESIFDCVY----TVQSDVWSYGILLWEIFSLGLNPYPGILV----NS 274
Query: 253 DCEEPFRPNLELLRDSCEP-FVLACMRDCWAEAPESRPDFPTIRARLK 299
              +  +   ++ + +  P  + + M+ CWA  P  RP F  I + L+
Sbjct: 275 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 33/181 (18%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS--- 200
           +GM++L    +  H +L + N +V S   +++TDFGL  L        I E +Y+     
Sbjct: 130 KGMSYLEDVRL-VHRDLAARNVLVKSPNHVKITDFGLARLL------DIDETEYHADGGK 182
Query: 201 --LLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKG 251
             + W A E +LR      R T ++DV+++ V + E++     P+ G    E      KG
Sbjct: 183 VPIKWMALESILRR-----RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG 237
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIID 311
           E   +P           C   V   M  CW    E RP F  + +    M    Q+ ++ 
Sbjct: 238 ERLPQP---------PICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQRFVVI 288
Query: 312 Q 312
           Q
Sbjct: 289 Q 289

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGLHELRHCAEN--DSIGEHQYYR 199
           G+T++H++ I  H +LK  N ++ S+     +++ DFGL      ++   D IG   Y  
Sbjct: 161 GITYMHKNKI-VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI- 218
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
                APE+L  T+      +K DV++  VIL+ ++    PF G   Y+
Sbjct: 219 -----APEVLHGTY-----DEKCDVWSTGVILYILLSGCPPFNGANEYD 257

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L++F   +  QGM FL  S    H ++ + N ++T+  V ++ DFGL       +++ I 
Sbjct: 162 LLHFSSQVA-QGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIV 218
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGE 252
           +      + W APE + D       T ++DV+++ ++L EI      P+ G  +      
Sbjct: 219 KGNARLPVKWMAPESIFDCVY----TVQSDVWSYGILLWEIFSLGLNPYPGILV----NS 270
Query: 253 DCEEPFRPNLELLRDSCEP-FVLACMRDCWAEAPESRPDFPTIRARLK 299
              +  +   ++ + +  P  + + M+ CWA  P  RP F  I + L+
Sbjct: 271 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 318

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGLHELRHCAEN--DSIGEHQYYR 199
           G+T++H++ I  H +LK  N ++ S+     +++ DFGL      ++   D IG   Y  
Sbjct: 162 GITYMHKNKI-VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI- 219
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
                APE+L  T+      +K DV++  VIL+ ++    PF G   Y+
Sbjct: 220 -----APEVLHGTY-----DEKCDVWSTGVILYILLSGCPPFNGANEYD 258

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L++F   +  QGM FL  S    H ++ + N ++T+  V ++ DFGL       +++ I 
Sbjct: 166 LLHFSSQVA-QGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIV 222
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGE 252
           +      + W APE + D       T ++DV+++ ++L EI      P+ G  +      
Sbjct: 223 KGNARLPVKWMAPESIFDCVY----TVQSDVWSYGILLWEIFSLGLNPYPGILV----NS 274
Query: 253 DCEEPFRPNLELLRDSCEP-FVLACMRDCWAEAPESRPDFPTIRARLK 299
              +  +   ++ + +  P  + + M+ CWA  P  RP F  I + L+
Sbjct: 275 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 19/171 (11%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L++F   +  QGM FL  S    H ++ + N ++T+  V ++ DFGL       +++ I 
Sbjct: 160 LLHFSSQVA-QGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIV 216
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED 253
           +      + W APE + D       T ++DV+++ ++L EI          GL    G  
Sbjct: 217 KGNARLPVKWMAPESIFDCVY----TVQSDVWSYGILLWEIFS-------LGLNPYPGIL 265
Query: 254 CEEPF----RPNLELLRDSCEP-FVLACMRDCWAEAPESRPDFPTIRARLK 299
               F    +   ++ + +  P  + + M+ CWA  P  RP F  I + L+
Sbjct: 266 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 316

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L++F   +  QGM FL  S    H ++ + N ++T+  V ++ DFGL       +++ I 
Sbjct: 154 LLHFSSQVA-QGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIV 210
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGE 252
           +      + W APE + D       T ++DV+++ ++L EI      P+ G  +      
Sbjct: 211 KGNARLPVKWMAPESIFDCVY----TVQSDVWSYGILLWEIFSLGLNPYPGILV----NS 262
Query: 253 DCEEPFRPNLELLRDSCEP-FVLACMRDCWAEAPESRPDFPTIRARLK 299
              +  +   ++ + +  P  + + M+ CWA  P  RP F  I + L+
Sbjct: 263 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 310

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGLHELRHCAEN--DSIGEHQYYR 199
           G+T++H++ I  H +LK  N ++ S+     +++ DFGL      ++   D IG   Y  
Sbjct: 144 GITYMHKNKI-VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI- 201
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
                APE+L  T+      +K DV++  VIL+ ++    PF G   Y+
Sbjct: 202 -----APEVLHGTY-----DEKCDVWSTGVILYILLSGCPPFNGANEYD 240

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGLHEL--RHCAENDSIGEHQYYR 199
           G+T++H+  I  H +LK  N ++ S+     +++ DFGL     ++    D IG   Y  
Sbjct: 133 GITYMHKHNI-VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI- 190
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
                APE+LR T+      +K DV++  VIL+ ++    PF G   Y+
Sbjct: 191 -----APEVLRGTY-----DEKCDVWSAGVILYILLSGTPPFYGKNEYD 229

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGLHEL--RHCAENDSIGEHQYYR 199
           G+T++H+  I  H +LK  N ++ S+     +++ DFGL     ++    D IG   Y  
Sbjct: 133 GITYMHKHNI-VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI- 190
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
                APE+LR T+      +K DV++  VIL+ ++    PF G   Y+
Sbjct: 191 -----APEVLRGTY-----DEKCDVWSAGVILYILLSGTPPFYGKNEYD 229

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	413
1ab8_A	220	Adenylyl cyclase; lyase, complex (transferase-inhi	2e-36
1ab8_A	220	Adenylyl cyclase; lyase, complex (transferase-inhi	7e-10
1ab8_A	220	Adenylyl cyclase; lyase, complex (transferase-inhi	9e-10
2wz1_A	219	Guanylate cyclase soluble subunit beta-1; lyase, G	3e-36
2wz1_A	219	Guanylate cyclase soluble subunit beta-1; lyase, G	8e-12
2wz1_A	219	Guanylate cyclase soluble subunit beta-1; lyase, G	4e-11
1yk9_A	204	Adenylate cyclase; beta-alpha-beta sandwich, struc	4e-35
1yk9_A	204	Adenylate cyclase; beta-alpha-beta sandwich, struc	8e-12
1yk9_A	204	Adenylate cyclase; beta-alpha-beta sandwich, struc	1e-11
3uvj_A	225	Guanylate cyclase soluble subunit alpha-3; nitric	1e-33
3uvj_A	225	Guanylate cyclase soluble subunit alpha-3; nitric	1e-12
3uvj_A	225	Guanylate cyclase soluble subunit alpha-3; nitric	2e-12
3et6_A	190	Soluble guanylyl cyclase beta; guanylate cyclase,	2e-30
3et6_A	190	Soluble guanylyl cyclase beta; guanylate cyclase,	9e-13
3et6_A	190	Soluble guanylyl cyclase beta; guanylate cyclase,	1e-11
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-29
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-28
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	8e-28
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-27
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-26
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-26
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	6e-26
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-25
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-25
1azs_A	220	VC1; complex (lyase/hydrolase), hydrolase, signal	5e-25
1azs_A	220	VC1; complex (lyase/hydrolase), hydrolase, signal	8e-12
1azs_A	220	VC1; complex (lyase/hydrolase), hydrolase, signal	6e-11
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-25
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-24
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-24
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-24
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-20
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-18
1fx2_A	235	Receptor-type adenylate cyclase gresag 4.1; CAMP,	1e-16
1fx2_A	235	Receptor-type adenylate cyclase gresag 4.1; CAMP,	2e-04
1y10_A	407	Hypothetical protein RV1264/MT1302; adenylyl cycla	4e-16
1y10_A	407	Hypothetical protein RV1264/MT1302; adenylyl cycla	2e-12
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	6e-15
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	8e-15
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	8e-15
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-14
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-14
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-14
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-14
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-14
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-14
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	3e-14
3hls_A	66	Guanylate cyclase soluble subunit beta-1; coiled-c	4e-14
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	5e-14
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	6e-14
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	7e-14
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	8e-14
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	8e-14
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-13
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-13
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-13
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-13
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-13
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-13
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-13
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-13
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-13
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-13
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-13
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-13
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-13
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-13
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-13
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	4e-13
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-13
3pls_A	298	Macrophage-stimulating protein receptor; protein k	5e-13
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-13
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	6e-13
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	7e-13
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	7e-13
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	7e-13
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	7e-13
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	8e-13
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-12
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-12
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-12
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-12
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	3e-12
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-12
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	6e-12
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	6e-12
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	9e-12
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-11
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-10
2w01_A	208	Adenylate cyclase; guanylyl cyclase, class III nuc	8e-08
3r5g_A	198	CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas	1e-07
1ybt_A	184	Hydrolase, alpha/beta hydrolase fold family; cycla	3e-07
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-07
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-07
1wc3_A	219	Adenylate cyclase; soluble adenylyl cyclase, CAMP	1e-06
3mr7_A	189	Adenylate/guanylate cyclase/hydrolase, alpha/beta	1e-06
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-05
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-05
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-05
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	5e-05
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-04
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-04
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-04
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-04
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	8e-04

>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B* Length = 220

 Score =  131 bits (333), Expect = 2e-36
 Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)

Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLT 60
            P+Y ++G+TVN ASRM+STG   +I ++      L  L GY    RG++ +KGKG++ T
Sbjct: 144 KPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTL-GYTCTCRGIINVKGKGDLKT 202

Query: 61  YWLVGATEGAVQ 72
           Y++      ++ 
Sbjct: 203 YFVNTEMSRSLS 214

>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B* Length = 220

 Score = 57.6 bits (140), Expect = 7e-10
 Identities = 9/37 (24%), Positives = 16/37 (43%)

Query: 374 RGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLERPV 410
           +   +  +SYD V + F+ I  F     ES   +  +
Sbjct: 3   KNEELYHQSYDCVCVMFASIPDFKEFYTESDVNKEGL 39

>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B* Length = 220

 Score = 57.6 bits (140), Expect = 9e-10
 Identities = 12/58 (20%), Positives = 19/58 (32%), Gaps = 12/58 (20%)

Query: 79  VSGLPIKNGDSHAGE----------IASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
            +GL       HA E          +   +  L+  +    I        KLR+GI+ 
Sbjct: 77  ATGLSAIPSQEHAQEPERQYMHIGTMVEFAYALVGKLD--AINKHSFNDFKLRVGINH 132

>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B Length = 219

 Score =  131 bits (331), Expect = 3e-36
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAAL----DKLGGYIVEERGVVCMKGKG 56
           MPRYCLFG+TVN  SR E+TGE  +I++S      L    +    + +E RG V MKGK 
Sbjct: 130 MPRYCLFGNTVNLTSRTETTGEKGKINVSEYTYRCLMSPENSDPQFHLEHRGPVSMKGKK 189

Query: 57  EVLTYWLVGATEGAVQGRERNQ 78
           E +  W +       +  +++ 
Sbjct: 190 EPMQVWFLSRKNTGTEETKQDD 211

>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B Length = 219

 Score = 63.5 bits (155), Expect = 8e-12
 Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 4/48 (8%)

Query: 79  VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
           VSGLP +    HA  I  ++L++++     ++       +++ IGIH+
Sbjct: 75  VSGLP-EPCIHHARSICHLALDMMEIAGQVQVDGES---VQITIGIHT 118

>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B Length = 219

 Score = 61.6 bits (150), Expect = 4e-11
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 375 GYGVEPESYDLVTIYFSDIVGFTAMSAESTPLERPV 410
              V  + YD VTI FS IVGF A  ++    E  +
Sbjct: 2   KRPVPAKRYDNVTILFSGIVGFNAFCSKHASGEGAM 37

>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis} Length = 204

 Score =  127 bits (322), Expect = 4e-35
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLT 60
             RYC++GD VN ASRMEST    +I +       L     +++ ERG + +KGKG + T
Sbjct: 122 RFRYCVWGDAVNVASRMESTDSVGQIQVPDEVYERLK--DDFVLRERGHINVKGKGVMRT 179

Query: 61  YWLVG----ATEGAVQGRERNQVS 80
           ++L+G    A  G V+G E     
Sbjct: 180 WYLIGRKVAADPGEVRGAEPRTAG 203

>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis} Length = 204

 Score = 63.0 bits (154), Expect = 8e-12
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 3/48 (6%)

Query: 79  VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
           VSG+P    D H   +A  +L++ +     K        + LR+G+ +
Sbjct: 66  VSGVPRPRPD-HTQALADFALDMTNVAAQLKDPRG--NPVPLRVGLAT 110

>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis} Length = 204

 Score = 62.6 bits (153), Expect = 1e-11
 Identities = 10/30 (33%), Positives = 19/30 (63%)

Query: 378 VEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
           +  + YD  ++ F+DIVGFT  ++ + P +
Sbjct: 3   IIADKYDEASVLFADIVGFTERASSTAPAD 32

>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens} Length = 225

 Score =  124 bits (313), Expect = 1e-33
 Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 8/88 (9%)

Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEV-- 58
           MPRYCLFG+ V  A++ ES   P +I++SP     L    G++   R    +        
Sbjct: 126 MPRYCLFGNNVTLANKFESCSVPRKINVSPTTYRLLKDCPGFVFTPRSREELPPNFPSEI 185

Query: 59  ------LTYWLVGATEGAVQGRERNQVS 80
                 L  +  G        ++  +  
Sbjct: 186 PGICHFLDAYQQGTNSKPCFQKKDVEDG 213

>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens} Length = 225

 Score = 66.2 bits (162), Expect = 1e-12
 Identities = 15/34 (44%), Positives = 25/34 (73%)

Query: 374 RGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
           +G  V+ + +  VT+ FSDIVGFTA+ ++ +PL+
Sbjct: 3   QGQVVQAKKFSNVTMLFSDIVGFTAICSQCSPLQ 36

>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens} Length = 225

 Score = 65.4 bits (160), Expect = 2e-12
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)

Query: 79  VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
             GL  K  D+HA +IA M+L +++        H   E +K+RIG+HS
Sbjct: 70  AGGLH-KESDTHAVQIALMALKMMELSDEVMSPHG--EPIKMRIGLHS 114

>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B Length = 190

 Score =  115 bits (289), Expect = 2e-30
 Identities = 36/68 (52%), Positives = 43/68 (63%)

Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLT 60
           MPR+ LFGDTVNTASRMES GE  +IHIS AC   L     + + ERG + +KGKG + T
Sbjct: 122 MPRFXLFGDTVNTASRMESHGEAGQIHISEACYCCLRSKERFEIRERGNITVKGKGTMRT 181

Query: 61  YWLVGATE 68
           Y L     
Sbjct: 182 YLLSPLER 189

>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B Length = 190

 Score = 65.4 bits (160), Expect = 9e-13
 Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 79  VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
           V  + +   D HA  +   +L + +     ++A    E +++R+G+HS
Sbjct: 66  VCNVTVPCDD-HADVLLEFALRMHEEAS--RVASSLGEPVRIRVGMHS 110

>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B Length = 190

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 13/30 (43%), Positives = 20/30 (66%)

Query: 378 VEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
              + +   T+ FSDIVGFT +++ S+PLE
Sbjct: 2   APAQEHPEATVLFSDIVGFTEIASRSSPLE 31

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  115 bits (290), Expect = 1e-29
 Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 4/159 (2%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +LH   I  H +LKS+N  +     +++ DFGL   +         E Q   S+LW
Sbjct: 131 RGMDYLHAKSI-IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE-QLSGSILW 188

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG-CGLYEPKGEDCEEPFRPNL 262
            APE++R        + ++DVYAF ++L+E++  + P+       +           P+L
Sbjct: 189 MAPEVIRMQD-SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL 247

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
             +R +C   +   M +C  +  + RP FP I A ++ +
Sbjct: 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  112 bits (282), Expect = 2e-28
 Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 11/159 (6%)

Query: 144 QGMTFLH-RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           +GM +LH R+P   H NLKS N +V  ++ ++V DFGL  L+      S           
Sbjct: 148 KGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPE--- 204

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
           W APE+LRD  +     +K+DVY+F VIL E+   + P+G     +       +  R  +
Sbjct: 205 WMAPEVLRDEPS----NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                +  P V A +  CW   P  RP F TI   L+ +
Sbjct: 261 ---PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  110 bits (276), Expect = 8e-28
 Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 13/161 (8%)

Query: 144 QGMTFLH-RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           +GM FLH   P+     L S + ++      +++   +           +       +  
Sbjct: 122 RGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVK--FSFQSPGRMY------APA 173

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
           W APE L+         + AD+++FAV+L E++ R  PF      E   +   E  RP +
Sbjct: 174 WVAPEALQKKPEDTN-RRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTI 232

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
                   P V   M+ C  E P  RP F  I   L+ M+D
Sbjct: 233 ---PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  107 bits (269), Expect = 1e-26
 Identities = 47/241 (19%), Positives = 82/241 (34%), Gaps = 39/241 (16%)

Query: 108 HKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRS---PIGCHGNLKSSN 164
           H     P  T    +                     QG+ +LH      +  H +LK  N
Sbjct: 91  HGAEPLPYYTAAHAMSWCLQC--------------SQGVAYLHSMQPKAL-IHRDLKPPN 135

Query: 165 CVVTSRW-VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKAD 223
            ++ +   VL++ DFG          ++ G      S  W APE+   ++     ++K D
Sbjct: 136 LLLVAGGTVLKICDFGTACDIQTHMTNNKG------SAAWMAPEVFEGSNY----SEKCD 185

Query: 224 VYAFAVILHEIIGRRGPFGGCGLYEPK-GEDCEEPFRPNLELLRDSCEPFVLACMRDCWA 282
           V+++ +IL E+I RR PF   G    +         RP L     +    + + M  CW+
Sbjct: 186 VFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL---IKNLPKPIESLMTRCWS 242

Query: 283 EAPESRPDFPTIRARLKHMK------DGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYAN 336
           + P  RP    I   + H+       D   +      +   E  +           +  +
Sbjct: 243 KDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPGEDGRVEPYVDFAEFYRLWS 302

Query: 337 N 337
            
Sbjct: 303 V 303

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  106 bits (267), Expect = 4e-26
 Identities = 38/166 (22%), Positives = 64/166 (38%), Gaps = 12/166 (7%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR--SL 201
           +GM +LH   I  H +LKS N    +   + +TDFGL  +    +     +    +   L
Sbjct: 141 KGMGYLHAKGI-LHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKLRIQNGWL 198

Query: 202 LWKAPELLRDTHAPIRG-----TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEE 256
              APE++R             ++ +DV+A   I +E+  R  PF          +    
Sbjct: 199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ-MGT 257

Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
             +P   L +      +   +  CWA   E RP F  +   L+ + 
Sbjct: 258 GMKP--NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  105 bits (265), Expect = 6e-26
 Identities = 53/215 (24%), Positives = 77/215 (35%), Gaps = 38/215 (17%)

Query: 100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGN 159
            L   +K+       Q     R+    DI                GM +LH   I  H +
Sbjct: 93  TLRGIIKSMDS----QYPWSQRVSFAKDIA--------------SGMAYLHSMNI-IHRD 133

Query: 160 LKSSNCVVTSRWVLQVTDFGL-----------HELRHCAENDSIGEHQYYRSLLWKAPEL 208
           L S NC+V     + V DFGL             LR   + D    +    +  W APE+
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193

Query: 209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-D 267
           +          +K DV++F ++L EIIGR         Y P+  D     R  L+     
Sbjct: 194 INGRSY----DEKVDVFSFGIVLCEIIGRVNADPD---YLPRTMDFGLNVRGFLDRYCPP 246

Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           +C P        C    PE RP F  +   L+ ++
Sbjct: 247 NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  103 bits (258), Expect = 2e-25
 Identities = 48/206 (23%), Positives = 79/206 (38%), Gaps = 40/206 (19%)

Query: 108 HKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRS---PIGCHGNLKSSN 164
           +++    +    + +     I               +GM +LH     PI  H +LKSSN
Sbjct: 94  NRVLSGKRIPPDILVNWAVQIA--------------RGMNYLHDEAIVPI-IHRDLKSSN 138

Query: 165 CVVT--------SRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLLWKAPELLRDTHAP 215
            ++         S  +L++TDFGL    H     S  G      +  W APE++R +   
Sbjct: 139 ILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAG------AYAWMAPEVIRASMF- 191

Query: 216 IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLA 275
              ++ +DV+++ V+L E++    PF G                  +     +C      
Sbjct: 192 ---SKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP---STCPEPFAK 245

Query: 276 CMRDCWAEAPESRPDFPTIRARLKHM 301
            M DCW   P SRP F  I  +L  +
Sbjct: 246 LMEDCWNPDPHSRPSFTNILDQLTTI 271

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  103 bits (258), Expect = 3e-25
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 19/166 (11%)

Query: 144 QGMTFLH-RSPIGCHGNLKSSNCVVTSRW-----VLQVTDFGLHELRHCAENDSIGEHQY 197
            G+ ++  ++P   H +L+S N  + S         +V DFGL +    + +  +G    
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLG---- 188

Query: 198 YRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK--GEDCE 255
             +  W APE +         T+KAD Y+FA+IL+ I+   GPF      + K      E
Sbjct: 189 --NFQWMAPETIGAEEESY--TEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE 244

Query: 256 EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           E  RP +    + C P +   +  CW+  P+ RP F  I   L  +
Sbjct: 245 EGLRPTI---PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287

>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A* Length = 220

 Score =  100 bits (252), Expect = 5e-25
 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)

Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEE--RGVVCMKGKGE- 57
             ++ ++ + V  A+ ME+ G+  RIHI+ A  + L+  G Y VE    G      K   
Sbjct: 146 KWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLN--GDYEVEPGCGGERNAYLKEHS 203

Query: 58  VLTYWLVGATE 68
           + T+ ++  T+
Sbjct: 204 IETFLILRCTQ 214

>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A* Length = 220

 Score = 63.4 bits (155), Expect = 8e-12
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 79  VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
           VSGLP    D HA     M +++++A+    +       + +R+GIHS
Sbjct: 90  VSGLPEARAD-HAHCCVEMGMDMIEAIS--LVREMTGVNVNMRVGIHS 134

>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A* Length = 220

 Score = 60.7 bits (148), Expect = 6e-11
 Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 352 EKRKTEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
                 ++   +            + +  + +D V+I F+DI GFT+++++ T  E
Sbjct: 4   HHHHAMEMKADINAKQ---EDMMFHKIYIQKHDNVSILFADIEGFTSLASQCTAQE 56

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  102 bits (256), Expect = 8e-25
 Identities = 41/188 (21%), Positives = 68/188 (36%), Gaps = 33/188 (17%)

Query: 144 QGMTFLHRSPIGCHGN-------LKSSNCVVTSRWVLQVTDFGL----HELRHCAENDSI 192
            G+  LH    G  G        LKS N +V       + D GL     +  +  +  + 
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175

Query: 193 GEHQYYRSLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK 250
                 R   + APE+L +T         ++ D++AF ++L E+  R    G    Y+P 
Sbjct: 176 PRVGTKR---YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232

Query: 251 GED---------------CEEPFRPNL--ELLRDSCEPFVLACMRDCWAEAPESRPDFPT 293
             D               C +  RPN+      D     +   M++CW + P +R     
Sbjct: 233 FYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALR 292

Query: 294 IRARLKHM 301
           I+  L  +
Sbjct: 293 IKKTLTKI 300

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  102 bits (255), Expect = 2e-24
 Identities = 41/189 (21%), Positives = 62/189 (32%), Gaps = 33/189 (17%)

Query: 145 GMTFLHRSPIGCHGN-------LKSSNCVVTSRWVLQVTDFGL----HELRHCAENDSIG 193
           G+  LH       G        LKS N +V       + D GL        +  +     
Sbjct: 146 GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNT 205

Query: 194 EHQYYRSLLWKAPELLRDTHAPIRG--TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG 251
                R   +  PE+L ++           AD+Y+F +IL E+  R    G    Y+   
Sbjct: 206 RVGTKR---YMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262

Query: 252 ED---------------CEEPFRPNL--ELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
            D               C +  RP+       D C   +   M +CWA  P SR     +
Sbjct: 263 HDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322

Query: 295 RARLKHMKD 303
           +  L  M +
Sbjct: 323 KKTLAKMSE 331

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  101 bits (253), Expect = 4e-24
 Identities = 46/193 (23%), Positives = 71/193 (36%), Gaps = 29/193 (15%)

Query: 144 QGMTFLHRSPIGCHGN-------LKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEH 195
            G+  LH   +G  G        LKS N +V       + D GL        +   I  +
Sbjct: 150 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPN 209

Query: 196 QYYRSLLWKAPELLRDTHAPIRG--TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED 253
               +  + APE+L D+         ++AD+YA  ++  EI  R    G    Y+    D
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269

Query: 254 ---------------CEEPFRPNLELLRDSCEPFVLAC--MRDCWAEAPESRPDFPTIRA 296
                          CE+  RPN+     SCE   +    MR+CW     +R     I+ 
Sbjct: 270 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329

Query: 297 RLKHMKDGKQKNI 309
            L  +   +Q+ I
Sbjct: 330 TLSQLS--QQEGI 340

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 89.8 bits (223), Expect = 3e-20
 Identities = 39/208 (18%), Positives = 74/208 (35%), Gaps = 34/208 (16%)

Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC---------HGNLKSSNCVVTSRWVLQ 174
           + ++++    L +  + + R G+ +LH    G          H ++KS N ++ +     
Sbjct: 113 LKANVVSWNELCHIAETMAR-GLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171

Query: 175 VTDFGLHELRHCAENDSIGEHQY--YRSLLWKAPELLRDTHAPIRG-TQKADVYAFAVIL 231
           + DFGL       ++      Q    R   + APE+L       R    + D+YA  ++L
Sbjct: 172 IADFGLALKFEAGKSAGDTHGQVGTRR---YMAPEVLEGAINFQRDAFLRIDMYAMGLVL 228

Query: 232 HEIIGRRGPFGG-CGLYEPKGED---------------CEEPFRPNL--ELLRDSCEPFV 273
            E+  R     G    Y    E+                 +  RP L     + +    +
Sbjct: 229 WELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAML 288

Query: 274 LACMRDCWAEAPESRPDFPTIRARLKHM 301
              + +CW    E+R     +  R+  M
Sbjct: 289 CETIEECWDHDAEARLSAGCVGERITQM 316

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 84.1 bits (208), Expect = 3e-18
 Identities = 44/217 (20%), Positives = 70/217 (32%), Gaps = 49/217 (22%)

Query: 144 QGMTFLHRSPIGC--------HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEH 195
           +G+ +LH              H +L S N +V +     ++DFGL            GE 
Sbjct: 122 RGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEE 181

Query: 196 QYYRSLL-----WKAPELLRDT---HAPIRGTQKADVYAFAVILHEIIGR---RGPFGGC 244
                       + APE+L             ++ D+YA  +I  EI  R     P    
Sbjct: 182 DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241

Query: 245 GLYE----------PKGED-----CEEPFRPNL--ELLRDSCEPFVLA-CMRDCWAEAPE 286
             Y+          P  ED       E  RP        +S     L   + DCW +  E
Sbjct: 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAE 301

Query: 287 SRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNI 323
           +R        R+             ++M + E+ K++
Sbjct: 302 ARLTAQXAEERMA------------ELMMIWERNKSV 326

>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A Length = 235

 Score = 77.6 bits (191), Expect = 1e-16
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAAL--DKLGGYIVEERGVVCMKGKGEV 58
              Y  +G T N A+R ES     ++ ++ A   +L  +      V   G V ++G  + 
Sbjct: 151 TKGYDYYGRTPNMAARTESVANGGQVLMTHAAYMSLSAEDRKQIDVTALGDVALRGVSDP 210

Query: 59  LTYWLVGATEG 69
           +  + +     
Sbjct: 211 VKMYQLNTVPS 221

>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A Length = 235

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 378 VEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
              E  D VT+ F+DI   TA+   + P  
Sbjct: 5   APKEPTDPVTLIFTDIESSTALW-AAHPDL 33

>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A* Length = 407

 Score = 78.5 bits (193), Expect = 4e-16
 Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 4/78 (5%)

Query: 3   RYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKL---GGYIVEERGVVCMKG-KGEV 58
               FG  VN ASR+     P  + ++ + + AL       G+     G   ++G +G+V
Sbjct: 310 AGDWFGSPVNVASRVTGVARPGAVLVADSVREALGDAPEADGFQWSFAGPRRLRGIRGDV 369

Query: 59  LTYWLVGATEGAVQGRER 76
             + +         G   
Sbjct: 370 RLFRVRRGATRTGSGGAA 387

>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A* Length = 407

 Score = 67.3 bits (164), Expect = 2e-12
 Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 10/110 (9%)

Query: 298 LKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTE 357
           L H  +  +   ++ +M     + +I      ++ +    L  +           +    
Sbjct: 138 LSHAAEAMRYTALEAIMRPGATELDIAKGSQALVSQIVPLLGPM----------IQDMLF 187

Query: 358 DLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
             L  M+     +   R  G        VT+ F+D+VGFT +    +  E
Sbjct: 188 MQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVVSAEE 237

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 73.4 bits (181), Expect = 6e-15
 Identities = 48/214 (22%), Positives = 77/214 (35%), Gaps = 69/214 (32%)

Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
           I ++T  M  G                   G+      GM +L      HR       +L
Sbjct: 78  ICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR-------DL 130

Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL------WKAPELLRDTHA 214
            + NC+V    V++V+DFG+           + + QY  S        W +PE+   +  
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRF--------VLDDQYTSSTGTKFPVKWASPEVFSFS-- 180

Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
             R + K+DV++F V++ E+   G+  P+      E       G    +P          
Sbjct: 181 --RYSSKSDVWSFGVLMWEVFSEGKI-PYENRSNSEVVEDISTGFRLYKP---------R 228

Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                V   M  CW E PE RP F  +  +L  +
Sbjct: 229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 74.6 bits (184), Expect = 8e-15
 Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 37/173 (21%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL- 202
            GM +L       H +L + NC+VT + VL+++DFG+             +  Y  S   
Sbjct: 224 AGMEYLESKCC-IHRDLAARNCLVTEKNVLKISDFGMSRE--------EADGVYAASGGL 274

Query: 203 ------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----P 249
                 W APE L       R + ++DV++F ++L E    G   P+      +      
Sbjct: 275 RQVPVKWTAPEALNYG----RYSSESDVWSFGILLWETFSLGAS-PYPNLSNQQTREFVE 329

Query: 250 KGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
           KG     P         + C   V   M  CWA  P  RP F TI   L+ ++
Sbjct: 330 KGGRLPCP---------ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 74.2 bits (182), Expect = 8e-15
 Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 39/193 (20%)

Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHE 182
           ++ D + + +L+ +   + + GM FL  +   C H +L + N +++ + V+++ DFGL  
Sbjct: 185 LYKDFLTLEHLICYSFQVAK-GMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLA- 240

Query: 183 LRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEII 235
            R   ++        Y         L W APE + D       T ++DV++F V+L EI 
Sbjct: 241 -RDIYKDP------DYVRKGDARLPLKWMAPETIFDR----VYTIQSDVWSFGVLLWEIF 289

Query: 236 GR-RGPFGGCGLYE------PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR 288
                P+ G  + E       +G     P         D   P +   M DCW   P  R
Sbjct: 290 SLGASPYPGVKIDEEFCRRLKEGTRMRAP---------DYTTPEMYQTMLDCWHGEPSQR 340

Query: 289 PDFPTIRARLKHM 301
           P F  +   L ++
Sbjct: 341 PTFSELVEHLGNL 353

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 73.4 bits (181), Expect = 1e-14
 Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 48/196 (24%)

Query: 125 HSDIIIITYLMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDF 178
           H D I   YL+N+   I + GM +L      HR       +L + N +V +   +++TDF
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRLVHR-------DLAARNVLVKTPQHVKITDF 161

Query: 179 GLHELRHCAENDSIGEHQYYRS------LLWKAPELLRDTHAPIRGTQKADVYAFAVILH 232
           GL   +     +       Y +      + W A E +         T ++DV+++ V + 
Sbjct: 162 GL--AKLLGAEEK-----EYHAEGGKVPIKWMALESILHR----IYTHQSDVWSYGVTVW 210

Query: 233 EII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP 285
           E++  G + P+ G    E      KGE   +P           C   V   MR CW    
Sbjct: 211 ELMTFGSK-PYDGIPASEISSILEKGERLPQP---------PICTIDVYMIMRKCWMIDA 260

Query: 286 ESRPDFPTIRARLKHM 301
           +SRP F  +      M
Sbjct: 261 DSRPKFRELIIEFSKM 276

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 37/198 (18%)

Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           H   +  + L+ +   I + GM +L      C H +L + N +V S   +++ DFGL +L
Sbjct: 120 HRARLDASRLLLYSSQICK-GMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKL 176

Query: 184 RHCAENDSIGEHQYYRSLL-------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII- 235
               ++       YY           W APE L D       ++++DV++F V+L+E+  
Sbjct: 177 LPLDKD-------YYVVREPGQSPIFWYAPESLSDN----IFSRQSDVWSFGVVLYELFT 225

Query: 236 -GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAE 283
              +        +  +   CE        LL             +C   V   M+ CWA 
Sbjct: 226 YCDK-SCSPSAEF-LRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAP 283

Query: 284 APESRPDFPTIRARLKHM 301
           +P+ RP F  +  +L  +
Sbjct: 284 SPQDRPSFSALGPQLDML 301

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 74.1 bits (182), Expect = 2e-14
 Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 23/174 (13%)

Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L++    I   GM ++ R     H +L+++N +V    V +V DFGL   R   +N+   
Sbjct: 365 LVDMAAQI-ASGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLA--RLIEDNEYTA 420

Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE---- 248
                  + W APE         R T K+DV++F ++L E+  + R P+ G    E    
Sbjct: 421 RQGAKFPIKWTAPEAALYG----RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 476

Query: 249 -PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
             +G     P           C   +   M  CW + PE RP F  ++A L+  
Sbjct: 477 VERGYRMPCP---------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 47/216 (21%), Positives = 78/216 (36%), Gaps = 69/216 (31%)

Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
           I IIT  M  G                    + +     M +L      HR       +L
Sbjct: 94  IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR-------DL 146

Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL------WKAPELLRDTHA 214
            + NC+V  + V++V+DFGL           + + +Y  S+       W  PE+L  +  
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRY--------VLDDEYTSSVGSKFPVRWSPPEVLMYS-- 196

Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
             + + K+D++AF V++ EI   G+  P+      E      +G     P          
Sbjct: 197 --KFSSKSDIWAFGVLMWEIYSLGKM-PYERFTNSETAEHIAQGLRLYRP---------H 244

Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
                V   M  CW E  + RP F  + + +  + D
Sbjct: 245 LASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 73.3 bits (180), Expect = 2e-14
 Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 35/180 (19%)

Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
           L++    I   GM ++ R     H +L+++N +V    V +V DFGL   R       I 
Sbjct: 282 LVDMAAQI-ASGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLA--RL------IE 331

Query: 194 EHQYYRSLL------WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGL 246
           +++Y           W APE         R T K+DV++F ++L E+  + R P+ G   
Sbjct: 332 DNEYTARQGAKFPIKWTAPEAALYG----RFTIKSDVWSFGILLTELTTKGRVPYPGMVN 387

Query: 247 YE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            E      +G     P           C   +   M  CW + PE RP F  ++A L+  
Sbjct: 388 REVLDQVERGYRMPCP---------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 71.9 bits (177), Expect = 3e-14
 Identities = 47/222 (21%), Positives = 79/222 (35%), Gaps = 64/222 (28%)

Query: 111 AHRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFL------HRSPIGCHGNLKS 162
           AH P   + +          +    +++    I   GM +L      HR       +L +
Sbjct: 110 AHGPDAMILVDGQPRQAKGELGLSQMLHIASQIAS-GMVYLASQHFVHR-------DLAT 161

Query: 163 SNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAP 215
            NC+V +  ++++ DFG+   R     D      YYR    ++L   W  PE +      
Sbjct: 162 RNCLVGANLLVKIGDFGMS--RDVYSTD------YYRVGGHTMLPIRWMPPESIMYR--- 210

Query: 216 IRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR------- 266
            + T ++DV++F VIL EI   G++ P+                   N E++        
Sbjct: 211 -KFTTESDVWSFGVILWEIFTYGKQ-PWFQ---------------LSNTEVIECITQGRV 253

Query: 267 ----DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDG 304
                 C   V   M  CW   P+ R +   I   L  +   
Sbjct: 254 LERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKA 295

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 71.1 bits (175), Expect = 3e-14
 Identities = 45/216 (20%), Positives = 79/216 (36%), Gaps = 69/216 (31%)

Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
           I I+T  ++ G                    +      GM FL      HR       +L
Sbjct: 78  IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHR-------DL 130

Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL------WKAPELLRDTHA 214
            + NC+V     ++V+DFG+           + + QY  S+       W APE+      
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRY--------VLDDQYVSSVGTKFPVKWSAPEVFHYF-- 180

Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
             + + K+DV+AF +++ E+   G+  P+      E      +G     P          
Sbjct: 181 --KYSSKSDVWAFGILMWEVFSLGKM-PYDLYTNSEVVLKVSQGHRLYRP---------H 228

Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
                +   M  CW E PE RP F  + + ++ +++
Sbjct: 229 LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264

>3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus} Length = 66

 Score = 65.9 bits (161), Expect = 4e-14
 Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 4/61 (6%)

Query: 312 QMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASR 371
           + + ++ +Q     ++ + +E   + L+         + +EK+KT+ LL+ +LP  VA+ 
Sbjct: 7   RDLVLLGEQFREEYKLTQELEMLTDRLQLT----LRALEDEKKKTDTLLYSVLPPSVANE 62

Query: 372 L 372
           L
Sbjct: 63  L 63

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 72.5 bits (178), Expect = 5e-14
 Identities = 51/194 (26%), Positives = 78/194 (40%), Gaps = 27/194 (13%)

Query: 134 LMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI 192
           L+     I    M +L +      H NL + NC+V    +++V DFGL   R    +   
Sbjct: 320 LLYMATQISS-AMEYLEKK--NFIHRNLAARNCLVGENHLVKVADFGLS--RLMTGDTYT 374

Query: 193 GEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE--- 248
                   + W APE L       + + K+DV+AF V+L EI      P+ G  L +   
Sbjct: 375 AHAGAKFPIKWTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 430

Query: 249 --PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ 306
              K    E P         + C   V   MR CW   P  RP F  I    + M   ++
Sbjct: 431 LLEKDYRMERP---------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF--QE 479

Query: 307 KNIIDQMMEMMEKQ 320
            +I D++ + + K+
Sbjct: 480 SSISDEVEKELGKR 493

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 71.2 bits (175), Expect = 6e-14
 Identities = 39/198 (19%), Positives = 68/198 (34%), Gaps = 37/198 (18%)

Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           + + I +   + +   I + GM +L        H +L + N +V S   +++ DFGL   
Sbjct: 119 NKNKINLKQQLKYAVQICK-GMDYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLT-- 173

Query: 184 RHCAENDSIGEHQYYRSLL-------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII- 235
           +    +       YY           W APE L  +    +    +DV++F V LHE++ 
Sbjct: 174 KAIETDKE-----YYTVKDDRDSPVFWYAPECLMQS----KFYIASDVWSFGVTLHELLT 224

Query: 236 -GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAE 283
                        +  G            L+             +C   V   MR CW  
Sbjct: 225 YCDSDSSPMALFLKMIG--PTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEF 282

Query: 284 APESRPDFPTIRARLKHM 301
            P +R  F  +    + +
Sbjct: 283 QPSNRTSFQNLIEGFEAL 300

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 70.7 bits (174), Expect = 7e-14
 Identities = 41/223 (18%), Positives = 83/223 (37%), Gaps = 51/223 (22%)

Query: 100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC-HG 158
           +LL+ ++  + +    +T    +      + +  L++F   + + GM FL  +   C H 
Sbjct: 113 DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK-GMAFL--ASKNCIHR 169

Query: 159 NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRD 211
           +L + N ++T   + ++ DFGL   R    +        Y     + L   W APE + +
Sbjct: 170 DLAARNILLTHGRITKICDFGLA--RDIKNDS------NYVVKGNARLPVKWMAPESIFN 221

Query: 212 THAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR--- 266
                  T ++DV+++ + L E+   G   P+ G                 + +  +   
Sbjct: 222 C----VYTFESDVWSYGIFLWELFSLGSS-PYPG--------------MPVDSKFYKMIK 262

Query: 267 --------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                   +     +   M+ CW   P  RP F  I   ++  
Sbjct: 263 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 70.8 bits (174), Expect = 8e-14
 Identities = 46/197 (23%), Positives = 72/197 (36%), Gaps = 50/197 (25%)

Query: 125 HSDIIIITYLMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDF 178
           H   +    L+N+G  I + GM +L      HR       NL + N ++ S   +QV DF
Sbjct: 108 HRGALGPQLLLNWGVQIAK-GMYYLEEHGMVHR-------NLAARNVLLKSPSQVQVADF 159

Query: 179 GLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKADVYAFAVIL 231
           G+ +L        +               + W A E +       + T ++DV+++ V +
Sbjct: 160 GVADL--------LPPDDKQLLYSEAKTPIKWMALESIHFG----KYTHQSDVWSYGVTV 207

Query: 232 HEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA 284
            E++  G   P+ G  L E      KGE   +P           C   V   M  CW   
Sbjct: 208 WELMTFGAE-PYAGLRLAEVPDLLEKGERLAQP---------QICTIDVYMVMVKCWMID 257

Query: 285 PESRPDFPTIRARLKHM 301
              RP F  +      M
Sbjct: 258 ENIRPTFKELANEFTRM 274

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 70.3 bits (173), Expect = 8e-14
 Identities = 46/221 (20%), Positives = 82/221 (37%), Gaps = 64/221 (28%)

Query: 111 AHRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFL------HRSPIGCHGNLKS 162
              P   +       +    +     ++    I   GM +L      H+       +L +
Sbjct: 105 MRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA-GMEYLSSHHVVHK-------DLAT 156

Query: 163 SNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAP 215
            N +V  +  ++++D GL   R     D      YY+    SLL   W APE +      
Sbjct: 157 RNVLVYDKLNVKISDLGLF--REVYAAD------YYKLLGNSLLPIRWMAPEAIMYG--- 205

Query: 216 IRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR------- 266
            + +  +D++++ V+L E+   G + P+ G                 N +++        
Sbjct: 206 -KFSIDSDIWSYGVVLWEVFSYGLQ-PYCG---------------YSNQDVVEMIRNRQV 248

Query: 267 ----DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
               D C  +V A M +CW E P  RP F  I +RL+   +
Sbjct: 249 LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 289

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 70.4 bits (173), Expect = 1e-13
 Identities = 47/215 (21%), Positives = 84/215 (39%), Gaps = 69/215 (32%)

Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
           ++++  +   G                    +  Q   GM +L      HR       +L
Sbjct: 84  LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR-------DL 136

Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTH 213
            + N ++ +R   +++DFGL   +    +DS     YY +       L W APE +    
Sbjct: 137 AARNVLLVNRHYAKISDFGLS--KALGADDS-----YYTARSAGKWPLKWYAPECINFR- 188

Query: 214 APIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLR 266
              + + ++DV+++ V + E +  G++ P+      E      +G+  E P         
Sbjct: 189 ---KFSSRSDVWSYGVTMWEALSYGQK-PYKKMKGPEVMAFIEQGKRMECP--------- 235

Query: 267 DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
             C P + A M DCW    E RPDF T+  R++  
Sbjct: 236 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 70.4 bits (173), Expect = 1e-13
 Identities = 45/194 (23%), Positives = 73/194 (37%), Gaps = 37/194 (19%)

Query: 134 LMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI 192
           L+ F   I   GM +LH       H +L + N ++ +  ++++ DFGL   +   E    
Sbjct: 136 LLLFAQQICE-GMAYLHA--QHYIHRDLAARNVLLDNDRLVKIGDFGLA--KAVPEGHE- 189

Query: 193 GEHQYYRS-------LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGG 243
               YYR        + W APE L++     +    +DV++F V L+E++          
Sbjct: 190 ----YYRVREDGDSPVFWYAPECLKEY----KFYYASDVWSFGVTLYELLTHCDSSQSPP 241

Query: 244 CGLYEPKGEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESRPDFP 292
               E  G    +     L L             D C   V   M++CW      RP F 
Sbjct: 242 TKFLELIG--IAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFE 299

Query: 293 TIRARLKHMKDGKQ 306
            +   LK + +  Q
Sbjct: 300 NLIPILKTVHEKYQ 313

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 70.0 bits (172), Expect = 1e-13
 Identities = 43/214 (20%), Positives = 80/214 (37%), Gaps = 68/214 (31%)

Query: 128 IIIITYLMNFGD-----------------GIPRQ---GMTFL------HRSPIGCHGNLK 161
            +++  +   G                   +  Q   GM +L      HR       +L 
Sbjct: 92  WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR-------DLA 144

Query: 162 SSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-------WKAPELLRDTHA 214
           + N ++ ++   +++DFGL   +    +++     YY++         W APE +     
Sbjct: 145 ARNVLLVTQHYAKISDFGLS--KALRADEN-----YYKAQTHGKWPVKWYAPECINYY-- 195

Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
             + + K+DV++F V++ E    G++ P+ G    E      KGE    P          
Sbjct: 196 --KFSSKSDVWSFGVLMWEAFSYGQK-PYRGMKGSEVTAMLEKGERMGCP---------A 243

Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            C   +   M  CW    E+RP F  +  RL++ 
Sbjct: 244 GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 69.5 bits (171), Expect = 1e-13
 Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 48/176 (27%)

Query: 145 GMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYY 198
           GM F+      HR       +L+++N +V+     ++ DFGL  L        I +++Y 
Sbjct: 121 GMAFIEERNYIHR-------DLRAANILVSDTLSCKIADFGLARL--------IEDNEYT 165

Query: 199 RSLL------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-- 248
                     W APE +         T K+DV++F ++L EI+  GR  P+ G    E  
Sbjct: 166 AREGAKFPIKWTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVI 220

Query: 249 ---PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
               +G     P         D+C   +   MR CW E PE RP F  +R+ L+  
Sbjct: 221 QNLERGYRMVRP---------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 70.5 bits (173), Expect = 2e-13
 Identities = 56/212 (26%), Positives = 81/212 (38%), Gaps = 50/212 (23%)

Query: 111 AHRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVV 167
           A RP          H+    ++   L++    + R GM +L  +   C H +L + N +V
Sbjct: 168 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVAR-GMEYL--ASKKCIHRDLAARNVLV 224

Query: 168 TSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQ 220
           T   V+++ DFGL   R     D      YY+      L   W APE L D       T 
Sbjct: 225 TEDNVMKIADFGLA--RDIHHID------YYKKTTNGRLPVKWMAPEALFDR----IYTH 272

Query: 221 KADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSC 269
           ++DV++F V+L EI        G   Y         P  P  EL +            +C
Sbjct: 273 QSDVWSFGVLLWEIFTL-----GGSPY---------PGVPVEELFKLLKEGHRMDKPSNC 318

Query: 270 EPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
              +   MRDCW   P  RP F  +   L  +
Sbjct: 319 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 71.1 bits (174), Expect = 2e-13
 Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 42/170 (24%)

Query: 146 MTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS----- 200
             F+HR       NL + N ++ +R   +++DFGL   +    +DS     YY +     
Sbjct: 455 KNFVHR-------NLAARNVLLVNRHYAKISDFGLS--KALGADDS-----YYTARSAGK 500

Query: 201 --LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKG 251
             L W APE +       + + ++DV+++ V + E +  G++ P+      E      +G
Sbjct: 501 WPLKWYAPECINFR----KFSSRSDVWSYGVTMWEALSYGQK-PYKKMKGPEVMAFIEQG 555

Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           +  E P           C P + A M DCW    E RPDF T+  R++  
Sbjct: 556 KRMECP---------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 69.2 bits (170), Expect = 2e-13
 Identities = 38/202 (18%), Positives = 75/202 (37%), Gaps = 40/202 (19%)

Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           H + I    L+ +   I + GM +L        H +L + N +V +   +++ DFGL   
Sbjct: 107 HKERIDHIKLLQYTSQICK-GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLT-- 161

Query: 184 RHCAENDSIGEHQYYRSLL-------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII- 235
           +   ++       +++          W APE L ++    + +  +DV++F V+L+E+  
Sbjct: 162 KVLPQDKE-----FFKVKEPGESPIFWYAPESLTES----KFSVASDVWSFGVVLYELFT 212

Query: 236 -GRRGPFGGCGLYEPKGEDCEEPFR--PNLELLR-----------DSCEPFVLACMRDCW 281
              +            G    +         L+            D C   +   M +CW
Sbjct: 213 YIEKSKSPPAEFMRMIGN---DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 269

Query: 282 AEAPESRPDFPTIRARLKHMKD 303
                 RP F  +  R+  ++D
Sbjct: 270 NNNVNQRPSFRDLALRVDQIRD 291

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 55/212 (25%), Positives = 81/212 (38%), Gaps = 50/212 (23%)

Query: 111 AHRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVV 167
           A RP                +T+  L++    + R GM +L  +   C H +L + N +V
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR-GMEYL--ASQKCIHRDLAARNVLV 190

Query: 168 TSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQ 220
           T   V+++ DFGL      A +  I    YY+      L   W APE L D       T 
Sbjct: 191 TENNVMKIADFGL------ARD--INNIDYYKKTTNGRLPVKWMAPEALFDR----VYTH 238

Query: 221 KADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSC 269
           ++DV++F V++ EI        G   Y         P  P  EL +            +C
Sbjct: 239 QSDVWSFGVLMWEIFTL-----GGSPY---------PGIPVEELFKLLKEGHRMDKPANC 284

Query: 270 EPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
              +   MRDCW   P  RP F  +   L  +
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 69.2 bits (170), Expect = 3e-13
 Identities = 44/212 (20%), Positives = 76/212 (35%), Gaps = 51/212 (24%)

Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTS 169
                        I +       L++F   + + GM FL  +   C H ++ + N ++T+
Sbjct: 143 RKSRVLETDPAFAIANSTASTRDLLHFSSQVAQ-GMAFL--ASKNCIHRDVAARNVLLTN 199

Query: 170 RWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQKA 222
             V ++ DFGL   R    +        Y     + L   W APE + D       T ++
Sbjct: 200 GHVAKIGDFGLA--RDIMNDS------NYIVKGNARLPVKWMAPESIFDC----VYTVQS 247

Query: 223 DVYAFAVILHEII--GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSC 269
           DV+++ ++L EI   G   P+ G                 N +  +              
Sbjct: 248 DVWSYGILLWEIFSLGLN-PYPG--------------ILVNSKFYKLVKDGYQMAQPAFA 292

Query: 270 EPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
              + + M+ CWA  P  RP F  I + L+  
Sbjct: 293 PKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 69.2 bits (170), Expect = 3e-13
 Identities = 53/214 (24%), Positives = 77/214 (35%), Gaps = 57/214 (26%)

Query: 111 AHRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVV 167
             R  ET       +S    ++   L++F   + R GM +L  S     H +L + N +V
Sbjct: 119 KSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR-GMDYL--SQKQFIHRDLAARNILV 175

Query: 168 TSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQ 220
              +V ++ DFGL   R           + Y       L   W A E L  +      T 
Sbjct: 176 GENYVAKIADFGLS--R---------GQEVYVKKTMGRLPVRWMAIESLNYS----VYTT 220

Query: 221 KADVYAFAVILHEII--GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------D 267
            +DV+++ V+L EI+  G   P+ G                   EL              
Sbjct: 221 NSDVWSYGVLLWEIVSLGGT-PYCGM---------------TCAELYEKLPQGYRLEKPL 264

Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           +C+  V   MR CW E P  RP F  I   L  M
Sbjct: 265 NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 69.3 bits (170), Expect = 3e-13
 Identities = 51/193 (26%), Positives = 71/193 (36%), Gaps = 60/193 (31%)

Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
           L+ F   I   GM +L      HR       +L + NC++     + V DFGL       
Sbjct: 139 LVRFMVDIAC-GMEYLSSRNFIHR-------DLAARNCMLAEDMTVCVADFGLSRK---- 186

Query: 188 ENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RG 239
               I    YYR    S L   W A E L D       T  +DV+AF V + EI+ R + 
Sbjct: 187 ----IYSGDYYRQGCASKLPVKWLALESLADN----LYTVHSDVWAFGVTMWEIMTRGQT 238

Query: 240 PFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESR 288
           P+ G                 N E+               C   V   M  CW+  P+ R
Sbjct: 239 PYAG---------------IENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQR 283

Query: 289 PDFPTIRARLKHM 301
           P F  +R  L+++
Sbjct: 284 PSFTCLRMELENI 296

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 68.8 bits (169), Expect = 3e-13
 Identities = 49/214 (22%), Positives = 81/214 (37%), Gaps = 69/214 (32%)

Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
           + II  L   G+                      Q    + +L      HR       ++
Sbjct: 90  VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR-------DI 142

Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS------LLWKAPELLRDTHA 214
            + N +V+S   +++ DFGL   R+  ++       YY++      + W APE +     
Sbjct: 143 AARNVLVSSNDCVKLGDFGLS--RYMEDST------YYKASKGKLPIKWMAPESINFR-- 192

Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
             R T  +DV+ F V + EI+  G + PF G    +       GE    P          
Sbjct: 193 --RFTSASDVWMFGVCMWEILMHGVK-PFQGVKNNDVIGRIENGERLPMP---------P 240

Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           +C P + + M  CWA  P  RP F  ++A+L  +
Sbjct: 241 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 69.2 bits (170), Expect = 3e-13
 Identities = 51/218 (23%), Positives = 82/218 (37%), Gaps = 63/218 (28%)

Query: 111 AHRPQETLKLRIGIHSDIII-ITYLMNFGDGIPRQGMTFL------HRSPIGCHGNLKSS 163
           +H P   L       +   + +  L+     +   GM +L      HR        L + 
Sbjct: 136 SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA-GMVYLAGLHFVHRD-------LATR 187

Query: 164 NCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAPI 216
           NC+V    V+++ DFG+   R     D      YYR    ++L   W  PE +       
Sbjct: 188 NCLVGQGLVVKIGDFGMS--RDIYSTD------YYRVGGRTMLPIRWMPPESILYR---- 235

Query: 217 RGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-------- 266
           + T ++DV++F V+L EI   G++ P+                   N E +         
Sbjct: 236 KFTTESDVWSFGVVLWEIFTYGKQ-PWYQ---------------LSNTEAIDCITQGREL 279

Query: 267 ---DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
               +C P V A MR CW   P+ R     + ARL+ +
Sbjct: 280 ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 70.3 bits (172), Expect = 3e-13
 Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 71/222 (31%)

Query: 122 IGIHSD--IIIITYLMNFGD------------------GIPRQ---GMTFL------HRS 152
           IG+ ++  + II  L   G+                      Q    + +L      HR 
Sbjct: 457 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR- 515

Query: 153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS------LLWKAP 206
                 ++ + N +V+S   +++ DFGL        +  + +  YY++      + W AP
Sbjct: 516 ------DIAARNVLVSSNDCVKLGDFGL--------SRYMEDSTYYKASKGKLPIKWMAP 561

Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFR 259
           E +       R T  +DV+ F V + EI+  G + PF G    +       GE    P  
Sbjct: 562 ESINFR----RFTSASDVWMFGVCMWEILMHGVK-PFQGVKNNDVIGRIENGERLPMP-- 614

Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                   +C P + + M  CWA  P  RP F  ++A+L  +
Sbjct: 615 -------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 69.3 bits (170), Expect = 3e-13
 Identities = 47/196 (23%), Positives = 76/196 (38%), Gaps = 48/196 (24%)

Query: 125 HSDIIIITYLMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDF 178
           H D I   YL+N+   I + GM +L      HR       +L + N +V +   +++TDF
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRLVHR-------DLAARNVLVKTPQHVKITDF 161

Query: 179 GLHELRHCAENDSIGEHQYYRS------LLWKAPELLRDTHAPIRGTQKADVYAFAVILH 232
           GL   +     +       Y +      + W A E +         T ++DV+++ V + 
Sbjct: 162 GLA--KLLGAEEK-----EYHAEGGKVPIKWMALESILHR----IYTHQSDVWSYGVTVW 210

Query: 233 EII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP 285
           E++  G + P+ G    E      KGE   +P           C   V   M  CW    
Sbjct: 211 ELMTFGSK-PYDGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDA 260

Query: 286 ESRPDFPTIRARLKHM 301
           +SRP F  +      M
Sbjct: 261 DSRPKFRELIIEFSKM 276

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 68.9 bits (169), Expect = 3e-13
 Identities = 40/202 (19%), Positives = 75/202 (37%), Gaps = 40/202 (19%)

Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHEL 183
           H + I    L+ +   I + GM +L        H +L + N +V +   +++ DFGL   
Sbjct: 138 HKERIDHIKLLQYTSQICK-GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLT-- 192

Query: 184 RHCAENDSIGEHQYYRSLL-------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII- 235
           +   ++       YY+          W APE L ++    + +  +DV++F V+L+E+  
Sbjct: 193 KVLPQDKE-----YYKVKEPGESPIFWYAPESLTES----KFSVASDVWSFGVVLYELFT 243

Query: 236 -GRRGPFGGCGLYEPKGEDCEEPFR--PNLELLR-----------DSCEPFVLACMRDCW 281
              +            G    +         L+            D C   +   M +CW
Sbjct: 244 YIEKSKSPPAEFMRMIGN---DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 300

Query: 282 AEAPESRPDFPTIRARLKHMKD 303
                 RP F  +  R+  ++D
Sbjct: 301 NNNVNQRPSFRDLALRVDQIRD 322

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 68.8 bits (169), Expect = 4e-13
 Identities = 49/193 (25%), Positives = 70/193 (36%), Gaps = 60/193 (31%)

Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
           L+ F   I   GM +L      HR       +L + NC++     + V DFGL   +   
Sbjct: 149 LLKFMVDIAL-GMEYLSNRNFLHR-------DLAARNCMLRDDMTVCVADFGLS--KKIY 198

Query: 188 ENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RG 239
             D      YYR    + +   W A E L D       T K+DV+AF V + EI  R   
Sbjct: 199 SGD------YYRQGRIAKMPVKWIAIESLADR----VYTSKSDVWAFGVTMWEIATRGMT 248

Query: 240 PFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESR 288
           P+ G                 N E+             + C   +   M  CW   P  R
Sbjct: 249 PYPG---------------VQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDR 293

Query: 289 PDFPTIRARLKHM 301
           P F  +R +L+ +
Sbjct: 294 PTFSVLRLQLEKL 306

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 68.4 bits (168), Expect = 4e-13
 Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 52/190 (27%)

Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
           L+ FG  + + GM +L      HR       +L + NC++  ++ ++V DFGL       
Sbjct: 130 LIGFGLQVAK-GMKYLASKKFVHR-------DLAARNCMLDEKFTVKVADFGLARD---- 177

Query: 188 ENDSIGEHQYYRSLL---------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--G 236
               + + +YY             W A E L+      + T K+DV++F V+L E++  G
Sbjct: 178 ----MYDKEYYSVHNKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRG 229

Query: 237 RRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF 291
              P+     ++      +G    +P         + C   +   M  CW    E RP F
Sbjct: 230 AP-PYPDVNTFDITVYLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSF 279

Query: 292 PTIRARLKHM 301
             + +R+  +
Sbjct: 280 SELVSRISAI 289

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 68.4 bits (168), Expect = 5e-13
 Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 38/183 (20%)

Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
           L++FG  + R GM +L      HR       +L + NC++   + ++V DFGL   R   
Sbjct: 126 LISFGLQVAR-GMEYLAEQKFVHR-------DLAARNCMLDESFTVKVADFGLA--RDIL 175

Query: 188 ENDSIGEHQYYRSLL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGG 243
           + +     Q+  + L   W A E L+      R T K+DV++F V+L E++ R   P+  
Sbjct: 176 DREYYSVQQHRHARLPVKWTALESLQTY----RFTTKSDVWSFGVLLWELLTRGAPPYRH 231

Query: 244 CGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
              ++      +G    +P         + C   +   M+ CW   P  RP F  +   +
Sbjct: 232 IDPFDLTHFLAQGRRLPQP---------EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEV 282

Query: 299 KHM 301
           + +
Sbjct: 283 EQI 285

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 68.1 bits (167), Expect = 6e-13
 Identities = 48/214 (22%), Positives = 81/214 (37%), Gaps = 53/214 (24%)

Query: 111 AHRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVV 167
           + R +               +T   L+ +   + + GM FL  +   C H +L + N ++
Sbjct: 125 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK-GMEFL--ASRKCIHRDLAARNILL 181

Query: 168 TSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQ 220
           + + V+++ DFGL   R   ++        Y     + L   W APE + D       T 
Sbjct: 182 SEKNVVKICDFGLA--RDIYKDP------DYVRKGDARLPLKWMAPETIFDR----VYTI 229

Query: 221 KADVYAFAVILHEII--GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------D 267
           ++DV++F V+L EI   G   P+ G               + + E  R           D
Sbjct: 230 QSDVWSFGVLLWEIFSLGAS-PYPGV--------------KIDEEFCRRLKEGTRMRAPD 274

Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
              P +   M DCW   P  RP F  +   L ++
Sbjct: 275 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 68.0 bits (167), Expect = 6e-13
 Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 50/199 (25%)

Query: 125 HSDIIIITYLMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDF 178
           H    ++  L  +   +  +GM +L      HR       +L + N ++ +R ++++ DF
Sbjct: 114 HQGHFLLGTLSRYAVQVA-EGMGYLESKRFIHR-------DLAARNLLLATRDLVKIGDF 165

Query: 179 GLHELRHCAENDSIGEHQYYRSLL-------WKAPELLRDTHAPIRGTQKADVYAFAVIL 231
           GL  +R   +ND      +Y           W APE L+        +  +D + F V L
Sbjct: 166 GL--MRALPQNDD-----HYVMQEHRKVPFAWCAPESLKTR----TFSHASDTWMFGVTL 214

Query: 232 HEII--GRRGPFGGC------GLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE 283
            E+   G+  P+ G          + +GE    P         + C   +   M  CWA 
Sbjct: 215 WEMFTYGQE-PWIGLNGSQILHKIDKEGERLPRP---------EDCPQDIYNVMVQCWAH 264

Query: 284 APESRPDFPTIRARLKHMK 302
            PE RP F  +R  L   +
Sbjct: 265 KPEDRPTFVALRDFLLEAQ 283

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 68.1 bits (167), Expect = 7e-13
 Identities = 51/194 (26%), Positives = 76/194 (39%), Gaps = 62/194 (31%)

Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
           ++     I   GM +L      HR        L + NC+V   + +++ DFG+   R   
Sbjct: 140 MIQMAGEIAD-GMAYLNANKFVHRD-------LAARNCMVAEDFTVKIGDFGMT--RDIY 189

Query: 188 ENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRR 238
           E D      YYR     LL   W +PE L+D       T  +DV++F V+L EI     +
Sbjct: 190 ETD------YYRKGGKGLLPVRWMSPESLKDG----VFTTYSDVWSFGVVLWEIATLAEQ 239

Query: 239 GPFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPES 287
            P+ G                 N ++LR           D+C   +   MR CW   P+ 
Sbjct: 240 -PYQG---------------LSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKM 283

Query: 288 RPDFPTIRARLKHM 301
           RP F  I + +K  
Sbjct: 284 RPSFLEIISSIKEE 297

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 68.1 bits (167), Expect = 7e-13
 Identities = 46/191 (24%), Positives = 77/191 (40%), Gaps = 61/191 (31%)

Query: 145 GMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYY 198
           GM +L      HR       +L + NC+V    V+++ DFGL   R+    D      YY
Sbjct: 186 GMAYLSERKFVHR-------DLATRNCLVGENMVVKIADFGLS--RNIYSAD------YY 230

Query: 199 R----SLL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEP 249
           +      +   W  PE +       R T ++DV+A+ V+L EI   G + P+ G      
Sbjct: 231 KADGNDAIPIRWMPPESIFYN----RYTTESDVWAYGVVLWEIFSYGLQ-PYYGM----- 280

Query: 250 KGEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
                      + E++            ++C   +   MR CW++ P  RP F +I   L
Sbjct: 281 ----------AHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRIL 330

Query: 299 KHMKDGKQKNI 309
           + M +  +  +
Sbjct: 331 QRMCERAEGTV 341

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 67.6 bits (166), Expect = 7e-13
 Identities = 48/214 (22%), Positives = 75/214 (35%), Gaps = 69/214 (32%)

Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
             II  L  +G+                      Q    M +L      HR       ++
Sbjct: 87  TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR-------DI 139

Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS------LLWKAPELLRDTHA 214
              N +V S   +++ DFGL           I +  YY++      + W +PE +     
Sbjct: 140 AVRNILVASPECVKLGDFGLSRY--------IEDEDYYKASVTRLPIKWMSPESINFR-- 189

Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
             R T  +DV+ FAV + EI+  G++ PF      +      KG+   +P         D
Sbjct: 190 --RFTTASDVWMFAVCMWEILSFGKQ-PFFWLENKDVIGVLEKGDRLPKP---------D 237

Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            C P +   M  CW   P  RP F  +   L  +
Sbjct: 238 LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 68.2 bits (167), Expect = 7e-13
 Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 40/184 (21%)

Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
           L+ FG  + + GM FL      HR       +L + NC++  ++ ++V DFGL   R   
Sbjct: 194 LIGFGLQVAK-GMKFLASKKFVHR-------DLAARNCMLDEKFTVKVADFGLA--RDMY 243

Query: 188 ENDSIGEHQYYRSLL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG 242
           + +    H    + L   W A E L+      + T K+DV++F V+L E++  G   P+ 
Sbjct: 244 DKEFDSVHNKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAP-PYP 298

Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
               ++      +G    +P         + C   +   M  CW    E RP F  + +R
Sbjct: 299 DVNTFDITVYLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 349

Query: 298 LKHM 301
           +  +
Sbjct: 350 ISAI 353

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 68.0 bits (167), Expect = 8e-13
 Identities = 46/179 (25%), Positives = 69/179 (38%), Gaps = 51/179 (28%)

Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR--- 199
           QGM +L  + +   H +L + N +V     ++++DFGL   R   E D       Y    
Sbjct: 161 QGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLS--RDVYEED------SYVKRS 210

Query: 200 -SLL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPKGED 253
              +   W A E L D       T ++DV++F V+L EI+  G   P+ G          
Sbjct: 211 QGRIPVKWMAIESLFDH----IYTTQSDVWSFGVLLWEIVTLGGN-PYPG---------- 255

Query: 254 CEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                 P   L             D+C   +   M  CW + P+ RP F  I   L+ M
Sbjct: 256 -----IPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 67.7 bits (166), Expect = 1e-12
 Identities = 50/213 (23%), Positives = 78/213 (36%), Gaps = 65/213 (30%)

Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
           ++IIT  M  G                   G+ R    GM +L      HR       +L
Sbjct: 121 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHR-------DL 173

Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-----LLWKAPELLRDTHAP 215
            + N +V S  V +V+DFGL   R   ++    E  Y  S     + W APE +      
Sbjct: 174 AARNILVNSNLVCKVSDFGLS--RVLEDDP---EATYTTSGGKIPIRWTAPEAISYR--- 225

Query: 216 IRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRDS 268
            + T  +DV++F +++ E++  G R P+     +E       G     P           
Sbjct: 226 -KFTSASDVWSFGIVMWEVMTYGER-PYWELSNHEVMKAINDGFRLPTP---------MD 274

Query: 269 CEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           C   +   M  CW +    RP F  I + L  +
Sbjct: 275 CPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 67.8 bits (166), Expect = 1e-12
 Identities = 55/212 (25%), Positives = 80/212 (37%), Gaps = 50/212 (23%)

Query: 111 AHRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVV 167
           A RP                +T+  L++    + R GM +L  +   C H +L + N +V
Sbjct: 180 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR-GMEYL--ASQKCIHRDLAARNVLV 236

Query: 168 TSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQ 220
           T   V+++ DFGL   R     D      YY+      L   W APE L D       T 
Sbjct: 237 TENNVMKIADFGLA--RDINNID------YYKKTTNGRLPVKWMAPEALFDR----VYTH 284

Query: 221 KADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSC 269
           ++DV++F V++ EI        G   Y         P  P  EL +            +C
Sbjct: 285 QSDVWSFGVLMWEIFTL-----GGSPY---------PGIPVEELFKLLKEGHRMDKPANC 330

Query: 270 EPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
              +   MRDCW   P  RP F  +   L  +
Sbjct: 331 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 68.2 bits (167), Expect = 1e-12
 Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 49/198 (24%)

Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
           L++F   I   GM F+      HR       +L+++N +V++  V ++ DFGL   R   
Sbjct: 286 LIDFSAQIAE-GMAFIEQRNYIHR-------DLRAANILVSASLVCKIADFGLA--RV-- 333

Query: 188 ENDSIGEHQYYRSLL------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRG 239
               I +++Y           W APE +         T K+DV++F ++L EI+  GR  
Sbjct: 334 ----IEDNEYTAREGAKFPIKWTAPEAINFG----SFTIKSDVWSFGILLMEIVTYGRI- 384

Query: 240 PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
           P+ G    E      +G     P         ++C   +   M  CW   PE RP F  I
Sbjct: 385 PYPGMSNPEVIRALERGYRMPRP---------ENCPEELYNIMMRCWKNRPEERPTFEYI 435

Query: 295 RARLKHMKDGKQKNIIDQ 312
           ++ L       +    + 
Sbjct: 436 QSVLDDFYTATESQYEEI 453

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 57/235 (24%), Positives = 86/235 (36%), Gaps = 74/235 (31%)

Query: 128 IIIITYLMNFGD-------------------GIPRQ---GMTFL------HRSPIGCHGN 159
             IIT  M +G+                    +  Q    M +L      HR       +
Sbjct: 84  FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR-------D 136

Query: 160 LKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-------WKAPELLRDT 212
           L + NC+V    +++V DFGL   R       +     Y +         W APE L   
Sbjct: 137 LAARNCLVGENHLVKVADFGLS--R-------LMTGDTYTAHAGAKFPIKWTAPESLAYN 187

Query: 213 HAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELL 265
               + + K+DV+AF V+L EI   G   P+ G  L +      K    E P        
Sbjct: 188 ----KFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYRMERP-------- 234

Query: 266 RDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQ 320
            + C   V   MR CW   P  RP F  I    + M   ++ +I D++ + + K+
Sbjct: 235 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF--QESSISDEVEKELGKR 286

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 67.4 bits (165), Expect = 2e-12
 Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 53/188 (28%)

Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
           L+ F   +    M +L      HR       +L + N +V+   V +V+DFGL       
Sbjct: 291 LLKFSLDVCE-AMEYLEGNNFVHR-------DLAARNVLVSEDNVAKVSDFGL------- 335

Query: 188 ENDSIGEHQYYRSLL------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRG 239
                 +              W APE LR+     + + K+DV++F ++L EI   GR  
Sbjct: 336 -----TKEASSTQDTGKLPVKWTAPEALREK----KFSTKSDVWSFGILLWEIYSFGRV- 385

Query: 240 PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
           P+    L +      KG   + P         D C P V   M++CW     +RP F  +
Sbjct: 386 PYPRIPLKDVVPRVEKGYKMDAP---------DGCPPAVYDVMKNCWHLDAATRPTFLQL 436

Query: 295 RARLKHMK 302
           R +L+H++
Sbjct: 437 REQLEHIR 444

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 66.2 bits (162), Expect = 3e-12
 Identities = 42/178 (23%), Positives = 63/178 (35%), Gaps = 50/178 (28%)

Query: 145 GMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS--- 200
           GM FL      C H +L + N +VT   V+++ DFGL   R    +        Y     
Sbjct: 184 GMEFL--EFKSCVHRDLAARNVLVTHGKVVKICDFGLA--RDIMSDS------NYVVRGN 233

Query: 201 -LL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPKGEDC 254
             L   W APE L +       T K+DV+++ ++L EI   G   P+ G           
Sbjct: 234 ARLPVKWMAPESLFEG----IYTIKSDVWSYGILLWEIFSLGVN-PYPGI---------- 278

Query: 255 EEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                 +    +                 +   M+ CWA     RP FP + + L   
Sbjct: 279 ----PVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 65.4 bits (160), Expect = 3e-12
 Identities = 34/221 (15%), Positives = 61/221 (27%), Gaps = 66/221 (29%)

Query: 122 IGIHSD---IIIITYLMNFGD------------------GIPRQ---GMTFLHRSPIGC- 156
            G+       I++   + FG                    + +Q    M FL        
Sbjct: 78  YGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL--EENTLI 135

Query: 157 HGNLKSSNCVVTSRWVLQ--------VTDFGLHELRHCAENDSIGEHQYYRS-LLWKAPE 207
           HGN+ + N ++      +        ++D G+           +      +  + W  PE
Sbjct: 136 HGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT--------VLPKDILQERIPWVPPE 187

Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRP 260
            + +           D ++F   L EI   G + P                     P   
Sbjct: 188 CIENPK---NLNLATDKWSFGTTLWEICSGGDK-PLSALDSQRKLQFYEDRHQLPAP--- 240

Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                  + E   L  + +C    P+ RP F  I   L  +
Sbjct: 241 ------KAAELANL--INNCMDYEPDHRPSFRAIIRDLNSL 273

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 64.9 bits (159), Expect = 6e-12
 Identities = 48/187 (25%), Positives = 75/187 (40%), Gaps = 53/187 (28%)

Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
           L+ F   +    M +L      HR       +L + N +V+   V +V+DFGL       
Sbjct: 119 LLKFSLDVCE-AMEYLEGNNFVHR-------DLAARNVLVSEDNVAKVSDFGL------T 164

Query: 188 ENDSIGEHQYYRSLL------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRG 239
           +                    W APE LR+     + + K+DV++F ++L EI   GR  
Sbjct: 165 KE------ASSTQDTGKLPVKWTAPEALREK----KFSTKSDVWSFGILLWEIYSFGRV- 213

Query: 240 PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
           P+    L +      KG   + P         D C P V   M++CW      RP F  +
Sbjct: 214 PYPRIPLKDVVPRVEKGYKMDAP---------DGCPPAVYEVMKNCWHLDAAMRPSFLQL 264

Query: 295 RARLKHM 301
           R +L+H+
Sbjct: 265 REQLEHI 271

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 65.0 bits (159), Expect = 6e-12
 Identities = 43/182 (23%), Positives = 65/182 (35%), Gaps = 54/182 (29%)

Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYR 199
            G  +L        H ++ + NC++T      V ++ DFG+   R            YYR
Sbjct: 151 CGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA--RDIYRAS------YYR 200

Query: 200 S----LL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPK 250
                +L   W  PE   +       T K D ++F V+L EI   G   P+         
Sbjct: 201 KGGCAMLPVKWMPPEAFMEG----IFTSKTDTWSFGVLLWEIFSLGYM-PYPS------- 248

Query: 251 GEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
                   + N E+L             +C   V   M  CW   PE RP+F  I  R++
Sbjct: 249 --------KSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300

Query: 300 HM 301
           + 
Sbjct: 301 YC 302

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 65.1 bits (159), Expect = 9e-12
 Identities = 45/214 (21%), Positives = 78/214 (36%), Gaps = 67/214 (31%)

Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
           ++I+T  M  G                   G+ R    GM +L      HR        L
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD-------L 173

Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS------LLWKAPELLRDTHA 214
            + N ++ S  V +V+DFGL   R   ++        Y +      + W +PE +     
Sbjct: 174 AARNILINSNLVCKVSDFGLG--RVLEDD----PEAAYTTRGGKIPIRWTSPEAIAYR-- 225

Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
             + T  +DV+++ ++L E++  G R P+      +      +G     P          
Sbjct: 226 --KFTSASDVWSYGIVLWEVMSYGER-PYWEMSNQDVIKAVDEGYRLPPP---------M 273

Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            C   +   M DCW +   +RP F  I + L  +
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 43/182 (23%), Positives = 65/182 (35%), Gaps = 54/182 (29%)

Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYR 199
            G  +L        H ++ + NC++T      V ++ DFG+   R            YYR
Sbjct: 192 CGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA--RDIYRAG------YYR 241

Query: 200 S----LL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPK 250
                +L   W  PE   +       T K D ++F V+L EI   G   P+         
Sbjct: 242 KGGCAMLPVKWMPPEAFMEG----IFTSKTDTWSFGVLLWEIFSLGYM-PYPS------- 289

Query: 251 GEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
                   + N E+L             +C   V   M  CW   PE RP+F  I  R++
Sbjct: 290 --------KSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341

Query: 300 HM 301
           + 
Sbjct: 342 YC 343

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 47/214 (21%), Positives = 76/214 (35%), Gaps = 67/214 (31%)

Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
            +I+T  M  G                   G+ R    GM +L      HR       +L
Sbjct: 125 AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHR-------DL 177

Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS------LLWKAPELLRDTHA 214
            + N +V S  V +V+DFGL   R   ++        Y +      + W APE +     
Sbjct: 178 AARNVLVDSNLVCKVSDFGLS--RVLEDD----PDAAYTTTGGKIPIRWTAPEAIAFR-- 229

Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
               +  +DV++F V++ E++  G R P+      +      +G     P          
Sbjct: 230 --TFSSASDVWSFGVVMWEVLAYGER-PYWNMTNRDVISSVEEGYRLPAP---------M 277

Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            C   +   M DCW +    RP F  I + L  +
Sbjct: 278 GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 61.0 bits (147), Expect = 4e-10
 Identities = 59/391 (15%), Positives = 103/391 (26%), Gaps = 139/391 (35%)

Query: 113 RPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSS--NCVVTSR 170
           R Q  LKLR  +          +     +   G+       +G  G  K+     V  S 
Sbjct: 133 RLQPYLKLRQALLE--------LRPAKNVLIDGV-------LGS-G--KTWVALDVCLSY 174

Query: 171 WVLQVTDFGLH--ELRHCAENDSI------------------------------------ 192
            V    DF +    L++C   +++                                    
Sbjct: 175 KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234

Query: 193 ----GEHQYYRSLL-----WKAPELLR--DTHAPI----RGTQKADVYAFAVILHEIIGR 237
                   Y   LL         +     +    I    R  Q  D  + A   H  +  
Sbjct: 235 RRLLKSKPYENCLLVLLNVQN-AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293

Query: 238 RGPFGGCGLYEPKGE-------DCEEPFRPNLELLRDSCE--PFVLACMRDCWAEAPESR 288
                   L   + +       DC        +L R+     P  L+ +        ES 
Sbjct: 294 HSM----TLTPDEVKSLLLKYLDCRPQ-----DLPREVLTTNPRRLSII-------AESI 337

Query: 289 PDFPTIRARLKHMKDGKQKNIID---------------QMMEMMEKQKNIIDQMMEMM-- 331
            D        KH+   K   II+                 + +     +I   ++ ++  
Sbjct: 338 RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397

Query: 332 -------EKYANNLED--LVNQR----TMEVY----EEKRKTEDL--LHRMLPAPVAS-R 371
                      N L    LV ++    T+ +     E K K E+   LHR +   V    
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSI---VDHYN 454

Query: 372 LTRGYGVEPESYDLVTIYFSDIVGFTAMSAE 402
           + + +  +      +  YF   +G    + E
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE 485

>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP} Length = 208

 Score = 51.4 bits (124), Expect = 8e-08
 Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 8   GDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGE-VLTYWLVGA 66
           G  VN   R+ES     +I IS     A        V     V  KG  + V+ + + G 
Sbjct: 138 GAQVNLTYRIESYTTGGQIFISSTTLEAAG--DRVHVNGNRTVQPKGVKDPVVIWDVAGV 195

Query: 67  TE 68
            E
Sbjct: 196 GE 197

>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} Length = 198

 Score = 50.6 bits (122), Expect = 1e-07
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 8   GDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGE-VLTYWLVGA 66
           G  VN ASR+ES  E   I IS    + +      +  ++G + +KG    V  Y +V +
Sbjct: 136 GREVNLASRLESASEAGEILISHETYSLIK--DVIMCRDKGQIAVKGFSRPVQIYQVVDS 193

Query: 67  TE 68
             
Sbjct: 194 RR 195

>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A* Length = 184

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 6   LFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGK-GEVLTYWLV 64
           + G  V+  +R+ +   P  + +S   +  +     +   ERG   +KG  G      L+
Sbjct: 118 VAGVAVHIGARVCALAGPSEVLVSSTVRDIVAGS-RHRFAERGEQELKGVPGRWRLCVLM 176

Query: 65  GATEGAVQGR 74
              + A + R
Sbjct: 177 R--DDATRTR 184

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 50.8 bits (121), Expect = 4e-07
 Identities = 15/101 (14%), Positives = 27/101 (26%), Gaps = 11/101 (10%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLL 202
           +    L    +  HG+    N  +     L + D     L               Y    
Sbjct: 205 RLAANLQSKGL-VHGHFTPDNLFIMPDGRLMLGDVSA--LWKVGTRGPASSVPVTYA--- 258

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
               E L  + A    T   + +   + ++ +     PFG 
Sbjct: 259 --PREFLNASTATF--THALNAWQLGLSIYRVWCLFLPFGL 295

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 29/165 (17%)

Query: 144 QGMTFLH-RSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSL 201
           +G+ FLH R+P   H +LK  N  +T     +++ D GL  L+  +   ++       + 
Sbjct: 140 KGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV-----IGTP 194

Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG----LYEPKGEDCEEP 257
            + APE+  + +      +  DVYAF + + E+     P+  C     +Y       +  
Sbjct: 195 EFMAPEMYEEKY-----DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA 249

Query: 258 FRPNLE--LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
               +    +++     +      C  +  + R    +I+  L H
Sbjct: 250 SFDKVAIPEVKE----II----EGCIRQNKDER---YSIKDLLNH 283

>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A* Length = 219

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 8   GDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGE-VLTY 61
           G +VN A+R++    P  I +S         +    + +R  + +KG  E V+T 
Sbjct: 159 GPSVNIAARLQEATAPNSIMVSAMVA---QYVPDEEIIKREFLELKGIDEPVMTC 210

>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi} Length = 189

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 16/72 (22%), Positives = 26/72 (36%)

Query: 4   YCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWL 63
             +FGD VN A+R+E+  EP  I +S                + G+  +K     +  W 
Sbjct: 110 GDIFGDAVNVAARLEAISEPGAICVSDIVHQITQDRVSEPFTDLGLQKVKNITRPIRVWQ 169

Query: 64  VGATEGAVQGRE 75
                   Q  +
Sbjct: 170 WVPDADRDQSHD 181

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 46.0 bits (110), Expect = 1e-05
 Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI-----GEHQYY 198
           +G+ +LH   I  H ++KS N ++   +V ++TDFG+ +     +   +     G   Y 
Sbjct: 150 RGLHYLHTRAI-IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYI 208

Query: 199 RSLLWKAPELLRDTHAPIRG--TQKADVYAFAVILHEII-GRR 238
                  PE         +G  T+K+DVY+F V+L E++  R 
Sbjct: 209 ------DPEYFI------KGRLTEKSDVYSFGVVLFEVLCARS 239

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 21/105 (20%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
           G+ +LH   I  H ++K SN +V     +++ DFG+      ++           +LL  
Sbjct: 149 GIEYLHYQKI-IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD-----------ALLSN 196

Query: 205 --------APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
                   APE L +T     G    DV+A  V L+  +  + PF
Sbjct: 197 TVGTPAFMAPESLSETRKIFSGK-ALDVWAMGVTLYCFVFGQCPF 240

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 45.4 bits (107), Expect = 2e-05
 Identities = 30/227 (13%), Positives = 71/227 (31%), Gaps = 57/227 (25%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWV-----------LQVTDFGL-HELRHCAENDS 191
             +  +H   I  HG++K  N ++ + ++           L + D G   +++   +   
Sbjct: 183 YMIEQVHDCEI-IHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTI 241

Query: 192 IGEHQYYRSLLWKAPELLRDTHAPIRG-TQKADVYAFAVILHEIIGRRGPFGGCGLYEPK 250
                   +  ++  E+L +     +    + D +  A  ++ ++         G Y   
Sbjct: 242 F--TAKCETSGFQCVEMLSN-----KPWNYQIDYFGVAATVYCML--------FGTYMKV 286

Query: 251 GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNII 310
             +  E               F      D W E              + ++ D      +
Sbjct: 287 KNEGGECKP---------EGLFRRLPHLDMWNE----------FFHVMLNIPDCHHLPSL 327

Query: 311 DQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTE 357
           D + + ++K            + Y N +  L N+  + + E KR  +
Sbjct: 328 DLLRQKLKK---------VFQQHYTNKIRALRNRLIVLLLECKRSRK 365

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 45.0 bits (106), Expect = 3e-05
 Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 4/97 (4%)

Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
            LH   +  H  L+  + V+  R  + +T F    L     +      + +      A  
Sbjct: 226 SLHHYGL-VHTYLRPVDIVLDQRGGVFLTGFEH--LVRDGASAVSPIGRGFAPPETTAER 282

Query: 208 LLR-DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
           +L    H P   T   D +   + ++ I     P   
Sbjct: 283 MLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTD 319

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 52/282 (18%), Positives = 95/282 (33%), Gaps = 53/282 (18%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVT-----SRWVLQVTDFGLHELRHCAENDSIGEHQYY 198
            G+  LH   I  H +LK  N +++      +    ++DFGL +      +         
Sbjct: 129 SGLAHLHSLNI-VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187

Query: 199 RSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGG---CGLYEPKGE-- 252
            +  W APE+L +       T   D+++   + + +I     PFG           G   
Sbjct: 188 GTEGWIAPEMLSED-CKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACS 246

Query: 253 -DCEEPFRPNLELLRDSCEPFVLACM-RDCWAEAPESRPDFPTIRARLKH---MKDGKQK 307
            DC  P +    + R+     +   +  D     P+ R   P+ +  LKH       KQ 
Sbjct: 247 LDCLHPEKHEDVIARE----LIEKMIAMD-----PQKR---PSAKHVLKHPFFWSLEKQL 294

Query: 308 NIIDQMMEMMEKQKNIIDQMMEMMEKYANN--------------LEDLVNQRTM---EVY 350
                + + +EK+  +   +++ +E+                    DL   RT     V 
Sbjct: 295 QFFQDVSDRIEKES-LDGPIVKQLERGGRAVVKMDWRENITVPLQTDLRKFRTYKGGSVR 353

Query: 351 EEKRKTEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSD 392
           +  R   +  H     P    +    G  P+ +     YF+ 
Sbjct: 354 DLLRAMRNKKHHYRELPA--EVRETLGTLPDDF---VCYFTS 390

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 15/102 (14%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEH---QYYRSL 201
           G+  LH + I  H +LK SN VV S   L++ DFGL   R    +  +  +   +YYR  
Sbjct: 139 GIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTSFMMTPYVVTRYYR-- 193

Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
              APE++          +  D+++   I+ E+I     F G
Sbjct: 194 ---APEVILGMGY----KENVDIWSVGCIMGEMIKGGVLFPG 228

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 42.9 bits (102), Expect = 1e-04
 Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 22/103 (21%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI-----GEHQYY 198
            G+ FLH +    H ++KS+N ++   +  +++DFGL           +     G   Y 
Sbjct: 144 NGINFLHENHH-IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYM 202

Query: 199 RSLLWKAPELLRDTHAPIRG--TQKADVYAFAVILHEII-GRR 238
                 APE LR       G  T K+D+Y+F V+L EII G  
Sbjct: 203 ------APEALR-------GEITPKSDIYSFGVVLLEIITGLP 232

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 15/102 (14%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEH---QYYRSL 201
           G+  LH + I  H +LK SN VV S   L++ DFGL   R    +  +  +   +YYR  
Sbjct: 176 GIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTSFMMTPYVVTRYYR-- 230

Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
              APE++          +  D+++   I+ E++  +  F G
Sbjct: 231 ---APEVILGMGY----KENVDIWSVGCIMGEMVRHKILFPG 265

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 14/102 (13%)

Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEH---QYYRSL 201
           G+  LH + +  H +L   N ++     + + DF L   R    + +   +   ++YR  
Sbjct: 146 GLHVLHEAGV-VHRDLHPGNILLADNNDITICDFNLA--REDTADANKTHYVTHRWYR-- 200

Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
              APEL+         T+  D+++   ++ E+  R+  F G
Sbjct: 201 ---APELVMQFK---GFTKLVDMWSAGCVMAEMFNRKALFRG 236

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 33/189 (17%), Positives = 77/189 (40%), Gaps = 20/189 (10%)

Query: 144 QGMTFLH-RSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-------HELRHCAENDSIGEH 195
           + +  +H + P   H +LK  N +++++  +++ DFG         +    A+  ++ E 
Sbjct: 147 RAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEE 206

Query: 196 QYYR--SLLWKAPELL-RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE 252
           +  R  + +++ PE++   ++ PI   +K D++A   IL+ +  R+ PF           
Sbjct: 207 EITRNTTPMYRTPEIIDLYSNFPI--GEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG 264

Query: 253 DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQ 312
               P               + A ++      PE R     +  +L+ +   +  N    
Sbjct: 265 KYSIPPHDTQY---TVFHSLIRAMLQ----VNPEERLSIAEVVHQLQEIAAARNVNPKSP 317

Query: 313 MMEMMEKQK 321
           + E++E+  
Sbjct: 318 ITELLEQNG 326

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 36/166 (21%), Positives = 60/166 (36%), Gaps = 37/166 (22%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQ------Y 197
             +  LH   +  H ++K +N  +  R   ++ DFGL       E  + G  +       
Sbjct: 168 LALAHLHSQGL-VHLDVKPANIFLGPRGRCKLGDFGL-----LVELGTAGAGEVQEGDPR 221

Query: 198 YRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYEPKGEDCEE 256
           Y      APELL+ ++        ADV++  + + E+      P GG G  + +      
Sbjct: 222 YM-----APELLQGSY-----GTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPP 271

Query: 257 PFRPNL-ELLRDSCEPFVLACM-RDCWAEAPESRPDFPTIRARLKH 300
            F   L   LR      ++  +  D     P+ R    T  A L  
Sbjct: 272 EFTAGLSSELRS----VLVMMLEPD-----PKLR---ATAEALLAL 305

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 40.6 bits (95), Expect = 8e-04
 Identities = 22/146 (15%), Positives = 44/146 (30%), Gaps = 25/146 (17%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
             +++LH   +  + +LK  N ++T   + ++ D G    R  +     G   +      
Sbjct: 193 PALSYLHSIGL-VYNDLKPENIMLTEEQL-KLIDLGAVS-RINSFGYLYGTPGFQ----- 244

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
            APE++R            D+Y     L  +        G  +     +D       +  
Sbjct: 245 -APEIVRTGPTV-----ATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYG 298

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRP 289
            L       +   +       P  R 
Sbjct: 299 RL-------LRRAI----DPDPRQRF 313

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	413
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.98
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.97
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.97
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.97
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.96
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.96
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.96
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.96
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.96
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.96
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.96
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.96
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.96
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.96
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.96
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.96
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.96
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.96
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.96
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.96
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.96
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.96
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.96
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.96
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.96
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.96
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.96
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.96
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.96
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.96
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.96
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.96
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.96
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.96
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.96
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.96
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.96
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.96
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.96
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.96
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.96
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.96
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.96
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.96
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.96
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.95
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.95
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.95
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.95
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.95
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.95
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.95
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.95
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.95
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.95
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.95
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.95
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.95
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.95
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.95
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.95
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.95
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.95
3niz_A	311	Rhodanese family protein; structural genomics, str	99.95
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.95
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.95
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.95
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.95
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.95
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.95
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.95
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.95
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.95
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.95
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.95
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.95
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.95
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.95
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.95
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.95
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.95
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.95
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.95
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.95
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.95
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.95
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.95
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.95
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.95
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.95
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.95
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.95
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.95
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.95
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.95
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.95
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.95
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.95
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.95
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.95
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.95
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.95
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.95
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.95
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.95
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.95
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.95
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.95
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.95
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.95
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.95
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.95
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.95
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.95
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.95
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.95
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.95
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.95
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.95
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.95
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.95
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.95
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.95
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.95
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.95
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.95
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.95
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.95
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.95
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.95
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.95
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.95
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.95
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.94
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.94
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.94
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.94
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.94
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.94
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.94
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.94
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.94
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.94
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.94
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.94
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.94
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.94
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.94
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.94
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.94
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.94
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.94
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.94
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.94
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.94
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.94
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.94
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.94
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.94
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.94
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.94
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.94
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.94
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.94
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.94
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.94
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.94
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.94
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.94
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.94
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.94
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.94
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.94
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.94
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.94
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.94
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.94
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.94
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.94
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.94
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.94
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.94
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.94
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.94
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.94
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.94
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.94
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.94
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.94
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.94
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.94
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.94
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.94
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.94
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.94
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.94
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.94
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.94
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.94
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.94
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.94
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.94
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.94
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.94
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.94
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.94
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.93
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.93
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.93
3bhy_A	283	Death-associated protein kinase 3; death associate	99.93
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.93
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.93
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.93
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.93
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.93
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.93
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.93
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.93
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.93
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.93
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.93
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.93
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.93
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.93
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.93
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.93
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.92
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.92
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.89
3uqc_A	286	Probable conserved transmembrane protein; structur	99.89
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.86
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.76
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.47
3et6_A	190	Soluble guanylyl cyclase beta; guanylate cyclase,	99.27
1ab8_A	220	Adenylyl cyclase; lyase, complex (transferase-inhi	99.26
1y10_A	407	Hypothetical protein RV1264/MT1302; adenylyl cycla	99.19
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.17
2wz1_A	219	Guanylate cyclase soluble subunit beta-1; lyase, G	99.16
1yk9_A	204	Adenylate cyclase; beta-alpha-beta sandwich, struc	99.14
1fx2_A	235	Receptor-type adenylate cyclase gresag 4.1; CAMP,	99.07
3uvj_A	225	Guanylate cyclase soluble subunit alpha-3; nitric	99.07
3mr7_A	189	Adenylate/guanylate cyclase/hydrolase, alpha/beta	99.03
3r5g_A	198	CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas	98.99
1azs_A	220	VC1; complex (lyase/hydrolase), hydrolase, signal	98.96
2w01_A	208	Adenylate cyclase; guanylyl cyclase, class III nuc	98.95
1wc3_A	219	Adenylate cyclase; soluble adenylyl cyclase, CAMP	98.93
1ybt_A	184	Hydrolase, alpha/beta hydrolase fold family; cycla	98.91
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.8
3hls_A	66	Guanylate cyclase soluble subunit beta-1; coiled-c	98.59
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.29
1y10_A	407	Hypothetical protein RV1264/MT1302; adenylyl cycla	98.16
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.85
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	96.71
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.5
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	95.78
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	95.72
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	94.56
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	92.79
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	92.57
1azs_A	220	VC1; complex (lyase/hydrolase), hydrolase, signal	92.57
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	92.45
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	91.66
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	91.64
3ats_A	357	Putative uncharacterized protein; hypothetical pro	91.03
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	90.68
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	89.63
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	87.54
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	86.7
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	86.57
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	86.18
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	83.71
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	83.7
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	82.99
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	82.25
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	80.82

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.4e-39  Score=298.19  Aligned_cols=161  Identities=25%  Similarity=0.409  Sum_probs=122.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||+++| |||||||+|||+++++.+||+|||+|+....... .......+||+.|||||++.+... ..|
T Consensus       140 qia--~gL~yLH~~~I-iHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~-~~~~~~~~GT~~ymAPE~l~~~~~-~~y  214 (307)
T 3omv_A          140 QTA--QGMDYLHAKNI-IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG-SQQVEQPTGSVLWMAPEVIRMQDN-NPF  214 (307)
T ss_dssp             HHH--HHHHHHHHTTC-BCSCCCSSSEEEETTEEEEECCCSSCBC-------------CCCCTTSCCHHHHHCCSS-CCC
T ss_pred             HHH--HHHHHHHHCCc-cCCccCHHHEEECCCCcEEEeeccCceecccCCc-ceeecccccCCCccCHHHhhccCC-CCC
Confidence            666  99999999999 9999999999999999999999999987543221 122345689999999999975432 124


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-CCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++|||+||+.||.+.+...... ........|..+..+..+++++.+||.+||+.||++|||+.+|++.
T Consensus       215 ~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          215 SFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             CcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            899999999999999999999998754322111 1112223344445567899999999999999999999999999999


Q ss_pred             HHhhccc
Q psy16840        298 LKHMKDG  304 (413)
Q Consensus       298 l~~~~~~  304 (413)
                      |+.+...
T Consensus       295 Le~l~~~  301 (307)
T 3omv_A          295 IELLQHS  301 (307)
T ss_dssp             HHHHHTT
T ss_pred             HHHHhcc
Confidence            9877543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=4.1e-39  Score=297.81  Aligned_cols=164  Identities=23%  Similarity=0.368  Sum_probs=129.6

Q ss_pred             cCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       125 ~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      .+++.....++.  ||+  .||+|||++++ |||||||+||||++++.+||+|||+|+........ .......||+.||
T Consensus       141 ~l~~~~~~~i~~--qia--~gl~yLH~~~i-iHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~-~~~~~~~gt~~ym  214 (308)
T 4gt4_A          141 ALEPPDFVHLVA--QIA--AGMEYLSSHHV-VHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY-KLLGNSLLPIRWM  214 (308)
T ss_dssp             CCCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCB-CSSSSSCBCGGGC
T ss_pred             CCCHHHHHHHHH--HHH--HHHHHHHhCCC-CCCCccccceEECCCCCEEECCcccceeccCCCce-eEecccccCCccc
Confidence            344444445555  677  99999999999 99999999999999999999999999876443222 2234557899999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      |||++.+..+    +.++|||||||++|||+| |..||.+.+..+....+.. ..+++   .+..+|+++.+||.+||+.
T Consensus       215 APE~l~~~~~----s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~-~~~~~---~p~~~~~~~~~li~~C~~~  286 (308)
T 4gt4_A          215 APEAIMYGKF----SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN-RQVLP---CPDDCPAWVYALMIECWNE  286 (308)
T ss_dssp             CHHHHHHCCC----CHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHT-TCCCC---CCTTCCHHHHHHHHHHTCS
T ss_pred             CHHHHhCCCC----CccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCC---CcccchHHHHHHHHHHcCC
Confidence            9999998877    999999999999999998 8999987653332222222 22222   2467999999999999999


Q ss_pred             CCCCCCChhHHHHHHHhhc
Q psy16840        284 APESRPDFPTIRARLKHMK  302 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l~~~~  302 (413)
                      ||++|||+.+|++.|+.+.
T Consensus       287 dP~~RPs~~ei~~~L~a~~  305 (308)
T 4gt4_A          287 FPSRRPRFKDIHSRLRAWG  305 (308)
T ss_dssp             SGGGSCCHHHHHHHHHTSC
T ss_pred             ChhHCcCHHHHHHHHHhcc
Confidence            9999999999999998753

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=4.5e-39  Score=302.74  Aligned_cols=191  Identities=24%  Similarity=0.352  Sum_probs=139.5

Q ss_pred             hhhHhhhhhhhccCCcc-chhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEecc
Q psy16840        100 NLLDAVKNHKIAHRPQE-TLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDF  178 (413)
Q Consensus       100 ~l~~~l~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Df  178 (413)
                      +|.++|+.......+.. .........+.+..+..++.  ||+  .||+|||++++ |||||||+|||+++++.+||+||
T Consensus       155 ~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--qia--~gl~yLH~~~i-iHRDLK~~NILl~~~~~vKi~DF  229 (353)
T 4ase_A          155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVA--KGMEFLASRKC-IHRDLAARNILLSEKNVVKICDF  229 (353)
T ss_dssp             EHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCC
T ss_pred             CHHHHHHhcccccccccccchhhccccCCHHHHHHHHH--HHH--HHHHhHhhCCe-ecCccCccceeeCCCCCEEECcc
Confidence            78888876653321110 00011112233333344444  666  99999999999 99999999999999999999999


Q ss_pred             ccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCC
Q psy16840        179 GLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEP  257 (413)
Q Consensus       179 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~  257 (413)
                      |+|+....... ........||+.|||||++.+..+    +.++|||||||++|||+| |..||.+.+............
T Consensus       230 Glar~~~~~~~-~~~~~~~~gt~~ymAPE~l~~~~y----~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g  304 (353)
T 4ase_A          230 GLARDIYKDPD-YVRKGDARLPLKWMAPETIFDRVY----TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG  304 (353)
T ss_dssp             GGGSCTTTCTT-SEEETTEEECGGGCCHHHHHHCCC----CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHT
T ss_pred             hhhhhcccCCC-ceeeccccccccccCHHHHhcCCC----CCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcC
Confidence            99987643321 222345678999999999998877    999999999999999998 899998755333222222223


Q ss_pred             CCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       258 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      .++..   +..+++++.++|.+||+.||++|||+.+|+++|+.+.+
T Consensus       305 ~~~~~---p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          305 TRMRA---PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             CCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCC---CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence            33333   36789999999999999999999999999999987754

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3.2e-38  Score=293.53  Aligned_cols=161  Identities=17%  Similarity=0.269  Sum_probs=125.3

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe-EEEEeccccccccccccCC--CcccccccCcccccCcc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW-VLQVTDFGLHELRHCAEND--SIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~--~~~~~~~~gt~~y~aPE  207 (413)
                      ...++.  ||+  .||+|||+++| |||||||+|||++.++ .+||+|||+|+........  .......+||+.|||||
T Consensus       152 ~~~~~~--qi~--~aL~ylH~~~I-iHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE  226 (336)
T 4g3f_A          152 ALYYLG--QAL--EGLEYLHTRRI-LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE  226 (336)
T ss_dssp             HHHHHH--HHH--HHHHHHHTTTE-ECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHH
T ss_pred             HHHHHH--HHH--HHHHHHHHCCc-eecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHH
Confidence            334444  777  99999999999 9999999999999987 6999999999876543221  11233467999999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      ++.+..+    +.++|||||||++|||++|+.||.+.+.......+...  .+....+++.+++++.++|.+||+.||.+
T Consensus       227 ~~~~~~y----~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~s~~~~~li~~~L~~dP~~  300 (336)
T 4g3f_A          227 VVMGKPC----DAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE--PPPIREIPPSCAPLTAQAIQEGLRKEPVH  300 (336)
T ss_dssp             HHTTCCC----CTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS--CCGGGGSCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHCCCCC----CcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC--CCCchhcCccCCHHHHHHHHHHccCCHhH
Confidence            9998877    99999999999999999999999876544333222222  12333456789999999999999999999


Q ss_pred             CCChhHHHHHHHhhc
Q psy16840        288 RPDFPTIRARLKHMK  302 (413)
Q Consensus       288 Rps~~~i~~~l~~~~  302 (413)
                      |||+.|+++.|....
T Consensus       301 R~sa~el~~~l~~~l  315 (336)
T 4g3f_A          301 RASAMELRRKVGKAL  315 (336)
T ss_dssp             SCCHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHH
Confidence            999999998887653

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.5e-38  Score=295.25  Aligned_cols=166  Identities=23%  Similarity=0.375  Sum_probs=122.9

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +.+..+..++.  ||+  .||+|||++++ |||||||+|||++.++.+||+|||+|+........ .......||+.|||
T Consensus       155 l~~~~~~~i~~--qia--~gl~yLH~~~i-iHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~-~~~~~~~gt~~ymA  228 (329)
T 4aoj_A          155 LGLGQLLAVAS--QVA--AGMVYLAGLHF-VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY-RVGGRTMLPIRWMP  228 (329)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEEETTTEEEECCCC-----------------CCCCGGGCC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHhcCCe-ecccccHhhEEECCCCcEEEcccccceeccCCCcc-eecCcccccccccC
Confidence            34444444545  666  99999999999 99999999999999999999999999876433221 12334578999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++.+..+    +.++|||||||++|||+| |+.||.+.+..+....+. ...++.   .+..+++++.+||.+||+.|
T Consensus       229 PE~~~~~~~----~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~-~g~~~~---~p~~~~~~~~~li~~cl~~d  300 (329)
T 4aoj_A          229 PESILYRKF----TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT-QGRELE---RPRACPPEVYAIMRGCWQRE  300 (329)
T ss_dssp             HHHHTTCCC----CHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHH-HTCCCC---CCTTCCHHHHHHHHHHCCSS
T ss_pred             hhhhcCCCC----CccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCCCCC---CcccccHHHHHHHHHHcCcC
Confidence            999998877    999999999999999999 899998755322221111 112222   23678999999999999999


Q ss_pred             CCCCCChhHHHHHHHhhcccC
Q psy16840        285 PESRPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~~~~  305 (413)
                      |++|||+.+|++.|+.+.+..
T Consensus       301 P~~RPs~~ei~~~L~~l~~~p  321 (329)
T 4aoj_A          301 PQQRHSIKDVHARLQALAQAP  321 (329)
T ss_dssp             TTTSCCHHHHHHHHHHHHHSC
T ss_pred             hhHCcCHHHHHHHHHHHhhCC
Confidence            999999999999999886643

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=8.5e-39  Score=294.44  Aligned_cols=180  Identities=20%  Similarity=0.307  Sum_probs=135.9

Q ss_pred             hhhHhhhhhhh--------ccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe
Q psy16840        100 NLLDAVKNHKI--------AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW  171 (413)
Q Consensus       100 ~l~~~l~~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~  171 (413)
                      +|.++|+.+..        .....+++..++.++.            ||+  .||+|||++++ |||||||+|||+++++
T Consensus       101 ~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~------------qia--~gl~yLH~~~i-iHRDlKp~NILl~~~~  165 (299)
T 4asz_A          101 DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ------------QIA--AGMVYLASQHF-VHRDLATRNCLVGENL  165 (299)
T ss_dssp             BHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHH------------HHH--HHHHHHHHTTC-CCSCCSGGGEEECGGG
T ss_pred             cHHHHHHhcCcccccccccCCCCCCCHHHHHHHHH------------HHH--HHHHHHHhCCc-ccCccCHhhEEECCCC
Confidence            77888876531        1112344444444444            555  99999999999 9999999999999999


Q ss_pred             EEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCC
Q psy16840        172 VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPK  250 (413)
Q Consensus       172 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~  250 (413)
                      .+||+|||+|+........ .......||+.|||||++.+..+    +.++|||||||++|||+| |+.||.+.+..+..
T Consensus       166 ~~Ki~DFGla~~~~~~~~~-~~~~~~~gt~~ymAPE~~~~~~~----~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~  240 (299)
T 4asz_A          166 LVKIGDFGMSRDVYSTDYY-RVGGHTMLPIRWMPPESIMYRKF----TTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI  240 (299)
T ss_dssp             CEEECCCSCHHHHTGGGCE-EETTTEEECGGGCCHHHHHHCCC----CHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred             cEEECCcccceecCCCCce-eecCceecChhhcCHHHHcCCCC----CchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence            9999999999875433221 11234468999999999998877    999999999999999998 89999875532222


Q ss_pred             CCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        251 GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      ..+.. ..++.   .+..+|+++.+||.+||+.||++|||+.+|...|+.+..
T Consensus       241 ~~i~~-~~~~~---~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~  289 (299)
T 4asz_A          241 ECITQ-GRVLQ---RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK  289 (299)
T ss_dssp             HHHHH-TCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHc-CCCCC---CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            11111 11222   246789999999999999999999999999999887754

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.7e-38  Score=296.67  Aligned_cols=151  Identities=17%  Similarity=0.228  Sum_probs=121.7

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||+|||++|| |||||||+|||++.++.+||+|||+|+......   ......+||+.|||||++.
T Consensus       127 ~~~~~~--qi~--~aL~ylH~~~I-iHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---~~~~~~~GT~~YmAPE~l~  198 (350)
T 4b9d_A          127 ILDWFV--QIC--LALKHVHDRKI-LHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV---ELARACIGTPYYLSPEICE  198 (350)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-EETTCCGGGEEECTTCCEEECSTTEESCCCHHH---HHHHHHHSCCTTCCHHHHT
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-eeccCCHHHEEECCCCCEEEcccccceeecCCc---ccccccCCCccccCHHHHC
Confidence            334445  888  99999999999 999999999999999999999999998764321   1124567999999999999


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +..+    +.++|||||||++|||++|+.||.+.+..+....+......    ..+..+++++.+||.+||+.||++|||
T Consensus       199 ~~~y----~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~----~~~~~~s~~~~~li~~~L~~dP~~R~s  270 (350)
T 4b9d_A          199 NKPY----NNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP----PVSLHYSYDLRSLVSQLFKRNPRDRPS  270 (350)
T ss_dssp             TCCC----CHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC----CCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCC----CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC----CCCccCCHHHHHHHHHHccCChhHCcC
Confidence            8877    99999999999999999999999876533322222222221    123578999999999999999999999


Q ss_pred             hhHHHHH
Q psy16840        291 FPTIRAR  297 (413)
Q Consensus       291 ~~~i~~~  297 (413)
                      +.+++++
T Consensus       271 ~~e~l~h  277 (350)
T 4b9d_A          271 VNSILEK  277 (350)
T ss_dssp             HHHHHTS
T ss_pred             HHHHhcC
Confidence            9999865

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.9e-37  Score=289.16  Aligned_cols=158  Identities=15%  Similarity=0.227  Sum_probs=124.1

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  ||+  .||+|||++|| |||||||+|||++.++.+||+|||+|+......   ....+.+||+.|||||
T Consensus       169 e~~~~~~~~--qi~--~aL~ylH~~~I-iHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---~~~~~~~GTp~YmAPE  240 (346)
T 4fih_A          169 EEQIAAVCL--AVL--QALSVLHAQGV-IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---PRRKSLVGTPYWMAPE  240 (346)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTCCEEECCCTTCEECCSSS---CCBCCCCSCGGGCCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCc-ccccCCHHHEEECCCCCEEEecCcCceecCCCC---CcccccccCcCcCCHH
Confidence            333445555  888  99999999999 999999999999999999999999998764322   2235678999999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      ++.+..+    +.++|||||||++|||++|..||.+.+.......+.. ...+..+ ....+++++.+||.+||..||++
T Consensus       241 vl~~~~y----~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~-~~~~~~~-~~~~~s~~~~dli~~~L~~dP~~  314 (346)
T 4fih_A          241 LISRLPY----GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-NLPPRLK-NLHKVSPSLKGFLDRLLVRDPAQ  314 (346)
T ss_dssp             HHTTCCB----CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SSCCCCS-CGGGSCHHHHHHHHHHSCSSTTT
T ss_pred             HHCCCCC----CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc-CCCCCCC-ccccCCHHHHHHHHHHcCCChhH
Confidence            9988877    9999999999999999999999987543222211111 1112221 22568899999999999999999


Q ss_pred             CCChhHHHHHHH
Q psy16840        288 RPDFPTIRARLK  299 (413)
Q Consensus       288 Rps~~~i~~~l~  299 (413)
                      |||+.+++++-.
T Consensus       315 R~ta~e~l~Hp~  326 (346)
T 4fih_A          315 RATAAELLKHPF  326 (346)
T ss_dssp             SCCHHHHTTCGG
T ss_pred             CcCHHHHhcCHh
Confidence            999999987643

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=6e-37  Score=280.19  Aligned_cols=151  Identities=20%  Similarity=0.348  Sum_probs=117.2

Q ss_pred             hHhhhccccCCchHHhhHhhhcCC--CcccCCCCCCCeEEcC-CeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSP--IGCHGNLKSSNCVVTS-RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~--iiiHrdlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..++.  ||+  .||+|||+++  | |||||||+|||+++ ++.+||+|||+|+....     ....+.+||+.||||
T Consensus       130 ~~~~~~~--qi~--~aL~ylH~~~~~I-iHRDlKp~NILl~~~~g~vKl~DFGla~~~~~-----~~~~~~~GTp~YmAP  199 (290)
T 3fpq_A          130 VLRSWCR--QIL--KGLQFLHTRTPPI-IHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-----SFAKAVIGTPEFMAP  199 (290)
T ss_dssp             HHHHHHH--HHH--HHHHHHHTSSSCC-CCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-----TSBEESCSSCCCCCG
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCCCE-EecccChhheeEECCCCCEEEEeCcCCEeCCC-----CccCCcccCccccCH
Confidence            3344455  777  9999999988  8 99999999999985 78999999999976422     123456899999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+ .+    +.++|||||||++|||+||+.||.+................|  ...+..+++++.+||.+||+.||+
T Consensus       200 E~~~~-~y----~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~  272 (290)
T 3fpq_A          200 EMYEE-KY----DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIPEVKEIIEGCIRQNKD  272 (290)
T ss_dssp             GGGGT-CC----CTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--GGGGGCCCHHHHHHHHHHSCSSGG
T ss_pred             HHcCC-CC----CcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC--CCCCccCCHHHHHHHHHHccCChh
Confidence            99875 34    899999999999999999999997644222111111222222  123456788999999999999999


Q ss_pred             CCCChhHHHHH
Q psy16840        287 SRPDFPTIRAR  297 (413)
Q Consensus       287 ~Rps~~~i~~~  297 (413)
                      +|||+.+++++
T Consensus       273 ~R~s~~e~l~H  283 (290)
T 3fpq_A          273 ERYSIKDLLNH  283 (290)
T ss_dssp             GSCCHHHHHTS
T ss_pred             HCcCHHHHhcC
Confidence            99999999864

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=4.3e-37  Score=282.54  Aligned_cols=144  Identities=21%  Similarity=0.288  Sum_probs=114.2

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||+|||++|| +||||||+|||++.++.+||+|||+|+......   ....+.+||+.|||||++.
T Consensus       128 ~~~~~~--qi~--~aL~ylH~~~I-iHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---~~~~~~~GT~~YmAPE~~~  199 (304)
T 3ubd_A          128 VKFYLA--ELA--LALDHLHSLGI-IYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---KKAYSFCGTVEYMAPEVVN  199 (304)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCSSCCGGGEEECTTSCEEEESSEEEEC--------CCCCSCCCCGGGCCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHHCCC-cCCCCCHHHeEEcCCCCEEecccccceeccCCC---ccccccccCcccCCHHHhc
Confidence            334444  788  99999999999 999999999999999999999999998653222   1234568999999999999


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +..+    +.++|||||||++|||++|+.||.+.+..+....+.....     .++..+++++.+||.+||+.||++|||
T Consensus       200 ~~~y----~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~~li~~~L~~dP~~R~t  270 (304)
T 3ubd_A          200 RRGH----TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL-----GMPQFLSPEAQSLLRMLFKRNPANRLG  270 (304)
T ss_dssp             TSCC----CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----CCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred             cCCC----CCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCC-----CCCCcCCHHHHHHHHHHcccCHHHCCC
Confidence            8877    8999999999999999999999987553322222211111     123578999999999999999999998


Q ss_pred             h
Q psy16840        291 F  291 (413)
Q Consensus       291 ~  291 (413)
                      +
T Consensus       271 a  271 (304)
T 3ubd_A          271 A  271 (304)
T ss_dssp             C
T ss_pred             C
Confidence            5

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.2e-36  Score=290.66  Aligned_cols=157  Identities=15%  Similarity=0.235  Sum_probs=123.7

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  ||+  .||+|||++|| |||||||+|||++.+|.+||+|||+|+......   ....+.+||+.|||||
T Consensus       246 e~~~~~~~~--qil--~aL~ylH~~~I-iHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~---~~~~~~~GTp~YmAPE  317 (423)
T 4fie_A          246 EEQIAAVCL--AVL--QALSVLHAQGV-IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---PRRKSLVGTPYWMAPE  317 (423)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSTTTEEECTTCCEEECCCTTCEECCSSC---CCBCCCEECTTTCCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCe-ecccCCHHHEEEcCCCCEEEecCccceECCCCC---ccccccccCcCcCCHH
Confidence            333445555  888  99999999999 999999999999999999999999998764322   2235678999999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      ++.+..+    +.++|||||||++|||++|+.||.+.+.......+.. ...+... ....+++++.+||.+||..||++
T Consensus       318 vl~~~~y----~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~-~~~~~~~-~~~~~s~~~~dli~~~L~~dP~~  391 (423)
T 4fie_A          318 LISRLPY----GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-NLPPRLK-NLHKVSPSLKGFLDRLLVRDPAQ  391 (423)
T ss_dssp             HHTTCCB----CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCCS-CTTSSCHHHHHHHHHHSCSSTTT
T ss_pred             HHCCCCC----CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc-CCCCCCc-ccccCCHHHHHHHHHHcCCChhH
Confidence            9988877    9999999999999999999999987543222211111 1111111 22568999999999999999999


Q ss_pred             CCChhHHHHHH
Q psy16840        288 RPDFPTIRARL  298 (413)
Q Consensus       288 Rps~~~i~~~l  298 (413)
                      |||+.+++++-
T Consensus       392 R~ta~ell~Hp  402 (423)
T 4fie_A          392 RATAAELLKHP  402 (423)
T ss_dssp             SCCHHHHTTCG
T ss_pred             CcCHHHHhcCH
Confidence            99999998753

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.7e-36  Score=280.76  Aligned_cols=184  Identities=24%  Similarity=0.355  Sum_probs=130.3

Q ss_pred             hhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhcC--------CCcccCCCCCCCeEEcCCe
Q psy16840        100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRS--------PIGCHGNLKSSNCVVTSRW  171 (413)
Q Consensus       100 ~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~--------~iiiHrdlkp~Nill~~~~  171 (413)
                      +|.++|+..      .+++..+..++.++            +  .||+|||++        +| |||||||+|||++.++
T Consensus        87 sL~~~l~~~------~l~~~~~~~i~~~i------------a--~gl~ylH~~~~~~~~~~~I-iHRDlKp~NILl~~~~  145 (303)
T 3hmm_A           87 SLFDYLNRY------TVTVEGMIKLALST------------A--SGLAHLHMEIVGTQGKPAI-AHRDLKSKNILVKKNG  145 (303)
T ss_dssp             BHHHHHHHC------CBCHHHHHHHHHHH------------H--HHHHHHHCCBCSTTCBCCE-ECSCCCGGGEEECTTS
T ss_pred             cHHHHHHhC------CCCHHHHHHHHHHH------------H--HHHHHHHHhhhhccCCCCE-eeccCCcccEEECCCC
Confidence            777777543      35555555555444            4  999999987        78 9999999999999999


Q ss_pred             EEEEeccccccccccccCC-CcccccccCcccccCcccccCCCCC--CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC
Q psy16840        172 VLQVTDFGLHELRHCAEND-SIGEHQYYRSLLWKAPELLRDTHAP--IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE  248 (413)
Q Consensus       172 ~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~--~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~  248 (413)
                      ++||+|||+|+........ .......+||+.|||||++.+....  ..++.++|||||||++|||+||..||.......
T Consensus       146 ~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~  225 (303)
T 3hmm_A          146 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ  225 (303)
T ss_dssp             CEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCC
T ss_pred             CEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccc
Confidence            9999999999876433221 1223346799999999999765321  123789999999999999999988875433222


Q ss_pred             CCC---------------CCCCCCCCCCcccccC--CChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhccc
Q psy16840        249 PKG---------------EDCEEPFRPNLELLRD--SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       249 ~~~---------------~~~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~~  304 (413)
                      ...               .......+|..+....  .+++.+.+||.+||+.||++|||+.+|++.|+++.+.
T Consensus       226 ~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          226 LPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             CTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            111               1122334454443222  2456899999999999999999999999999887543

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=3.2e-36  Score=273.05  Aligned_cols=154  Identities=19%  Similarity=0.208  Sum_probs=113.4

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ......++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+|+......    ...+.+||+.|+|||
T Consensus       111 e~~~~~~~~--qi~--~al~ylH~~~I-iHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~----~~~~~~GT~~Y~APE  181 (275)
T 3hyh_A          111 EQEARRFFQ--QII--SAVEYCHRHKI-VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPE  181 (275)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTC-CCCCCCTTTEEECTTCCEEECCSSCC-------------------CTTSCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCc-ccccCChHHeEECCCCCEEEeecCCCeecCCCC----ccCCeeECcccCChh
Confidence            333444555  888  99999999999 999999999999999999999999998654322    234568999999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      ++.+..+.   +.++||||+||++|+|++|+.||.+.+.......+....  +   .++..+++++.+||.+||+.||++
T Consensus       182 ~~~~~~y~---~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~--~---~~p~~~s~~~~~li~~~L~~dP~~  253 (275)
T 3hyh_A          182 VISGKLYA---GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV--Y---TLPKFLSPGAAGLIKRMLIVNPLN  253 (275)
T ss_dssp             HHSSSSCC---CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--C---CCCTTSCHHHHHHHHHHSCSSGGG
T ss_pred             hhcCCCCC---CChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC--C---CCCCCCCHHHHHHHHHHccCChhH
Confidence            99887652   689999999999999999999998754222111111111  1   123578999999999999999999


Q ss_pred             CCChhHHHHHH
Q psy16840        288 RPDFPTIRARL  298 (413)
Q Consensus       288 Rps~~~i~~~l  298 (413)
                      |||+.+++++-
T Consensus       254 R~s~~eil~hp  264 (275)
T 3hyh_A          254 RISIHEIMQDD  264 (275)
T ss_dssp             SCCHHHHHHCH
T ss_pred             CcCHHHHHcCc
Confidence            99999998754

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3.5e-36  Score=276.62  Aligned_cols=150  Identities=16%  Similarity=0.263  Sum_probs=120.6

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ..++.  ||+  .||+|||++|| |||||||+|||++.++.+||+|||+|+....... .....+.+||+.|||||++.+
T Consensus       135 ~~~~~--qi~--~al~ylH~~~I-iHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~-~~~~~~~~GTp~YmAPEvl~~  208 (311)
T 4aw0_A          135 RFYTA--EIV--SALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANSFVGTAQYVSPELLTE  208 (311)
T ss_dssp             HHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT-CCCBCCCCSCGGGCCHHHHHH
T ss_pred             HHHHH--HHH--HHHHHHHHCCC-ccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC-cccccCcccCcccCCHHHHcC
Confidence            33444  888  99999999999 9999999999999999999999999987643222 223456789999999999998


Q ss_pred             CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        212 THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       212 ~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      ..+    +.++||||+||++|||++|..||.+.+.......+.....     .++..+++++++||.+||..||++|||+
T Consensus       209 ~~y----~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~dli~~lL~~dp~~R~t~  279 (311)
T 4aw0_A          209 KSA----CKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY-----DFPEKFFPKARDLVEKLLVLDATKRLGC  279 (311)
T ss_dssp             SCB----CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-----CCCTTCCHHHHHHHHHHSCSSGGGSTTS
T ss_pred             CCC----CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-----CCCcccCHHHHHHHHHHccCCHhHCcCh
Confidence            877    9999999999999999999999987543222222221111     1235788999999999999999999999


Q ss_pred             hHHHH
Q psy16840        292 PTIRA  296 (413)
Q Consensus       292 ~~i~~  296 (413)
                      +|++.
T Consensus       280 ~e~~~  284 (311)
T 4aw0_A          280 EEMEG  284 (311)
T ss_dssp             GGGTC
T ss_pred             HHHcC
Confidence            98743

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.8e-34  Score=273.04  Aligned_cols=164  Identities=20%  Similarity=0.281  Sum_probs=121.9

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccC-CCcccccccCcccccC
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN-DSIGEHQYYRSLLWKA  205 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~~gt~~y~a  205 (413)
                      ....+..++.  ||+  .||+|||++|| |||||||+|||++.++.+||+|||+|+....... ......+.+||+.|+|
T Consensus       156 ~~~~~~~~~~--qil--~al~ylH~~~i-iHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~A  230 (398)
T 4b99_A          156 TLEHVRYFLY--QLL--RGLKYMHSAQV-IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA  230 (398)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-BCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCC
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCcC-cCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcC
Confidence            3334455566  888  99999999999 9999999999999999999999999987643321 1223456789999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC--------------------------CCCCCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED--------------------------CEEPFR  259 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~--------------------------~~~~~~  259 (413)
                      ||++.+..+   ++.++||||+||++|||++|++||.+.+..+....+                          ......
T Consensus       231 PEv~~~~~~---~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~  307 (398)
T 4b99_A          231 PELMLSLHE---YTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQP  307 (398)
T ss_dssp             HHHHTTCSC---CCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCC
T ss_pred             HHHhcCCCC---CCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCC
Confidence            999887643   289999999999999999999999875421111000                          000011


Q ss_pred             CCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       260 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      .......+.+++++.+||.+||..||.+|||+.+++++-
T Consensus       308 ~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp  346 (398)
T 4b99_A          308 VPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP  346 (398)
T ss_dssp             CCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSG
T ss_pred             CCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCH
Confidence            112223356789999999999999999999999998753

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.98  E-value=1.5e-34  Score=266.43  Aligned_cols=150  Identities=23%  Similarity=0.317  Sum_probs=105.0

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC---------cccccccCccc
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS---------IGEHQYYRSLL  202 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~---------~~~~~~~gt~~  202 (413)
                      ..++.  ||+  .||+|||++|| |||||||+|||++.++.+||+|||+|+.........         ....+.+||+.
T Consensus       121 ~~i~~--qi~--~al~ylH~~~I-iHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~  195 (299)
T 4g31_A          121 LHIFL--QIA--EAVEFLHSKGL-MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKL  195 (299)
T ss_dssp             HHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCT
T ss_pred             HHHHH--HHH--HHHHHHHHCcC-ccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCcc
Confidence            34444  888  99999999999 999999999999999999999999998765432211         11234579999


Q ss_pred             ccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC-CCCCCCCCCCCCCcccccCCChHHHHHHHHHHh
Q psy16840        203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE-PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCW  281 (413)
Q Consensus       203 y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (413)
                      |||||++.+..+    +.++|||||||++|||++   ||.+..... .......... |   ......++.+.+||.+||
T Consensus       196 YmAPE~~~~~~y----~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~-p---~~~~~~~~~~~~li~~~L  264 (299)
T 4g31_A          196 YMSPEQIHGNSY----SHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKF-P---PLFTQKYPCEYVMVQDML  264 (299)
T ss_dssp             TSCHHHHTTCCC----CTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCC-C---HHHHHHCHHHHHHHHHHT
T ss_pred             ccCHHHHcCCCC----CCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCC-C---CCCcccCHHHHHHHHHHc
Confidence            999999998877    999999999999999996   775421000 0000111111 1   112344567889999999


Q ss_pred             ccCCCCCCChhHHHHH
Q psy16840        282 AEAPESRPDFPTIRAR  297 (413)
Q Consensus       282 ~~~P~~Rps~~~i~~~  297 (413)
                      +.||.+|||+.+++++
T Consensus       265 ~~dP~~Rps~~eil~h  280 (299)
T 4g31_A          265 SPSPMERPEAINIIEN  280 (299)
T ss_dssp             CSSGGGSCCHHHHHTS
T ss_pred             CCChhHCcCHHHHhcC
Confidence            9999999999999864

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.97  E-value=2e-32  Score=259.03  Aligned_cols=161  Identities=18%  Similarity=0.145  Sum_probs=114.2

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-eEEEEeccccccccccccCC-----------------
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAEND-----------------  190 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~-----------------  190 (413)
                      ..+..++.  ||+  .||+|||++|| +||||||+|||++.+ +.+||+|||+|+........                 
T Consensus       117 ~~~~~~~~--qll--~al~ylH~~gI-iHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (361)
T 4f9c_A          117 QEVREYML--NLF--KALKRIHQFGI-VHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQN  191 (361)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC------------
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCe-EeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccc
Confidence            33445566  888  99999999999 999999999999877 79999999999765322110                 


Q ss_pred             --------CcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC------------
Q psy16840        191 --------SIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK------------  250 (413)
Q Consensus       191 --------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~------------  250 (413)
                              .....+.+||+.|+|||++.+...   ++.++||||+||++|||++|+.||...+.....            
T Consensus       192 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~---y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~  268 (361)
T 4f9c_A          192 KCSICLSRRQQVAPRAGTPGFRAPEVLTKCPN---QTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRE  268 (361)
T ss_dssp             --------------CCCCGGGCCHHHHTTCSC---CCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHH
T ss_pred             cccccccccccccccccCccccCHHHHcCCCC---CCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCcc
Confidence                    011234579999999999987642   289999999999999999999999543211000            


Q ss_pred             ---------------CCCC-------------CCCCCCC----------cccccCCChHHHHHHHHHHhccCCCCCCChh
Q psy16840        251 ---------------GEDC-------------EEPFRPN----------LELLRDSCEPFVLACMRDCWAEAPESRPDFP  292 (413)
Q Consensus       251 ---------------~~~~-------------~~~~~~~----------~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~  292 (413)
                                     ....             .....|.          .......+++++.+|+.+||..||.+|||++
T Consensus       269 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~  348 (361)
T 4f9c_A          269 TIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAE  348 (361)
T ss_dssp             HHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred             chhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHH
Confidence                           0000             0000000          0011245788999999999999999999999


Q ss_pred             HHHHH
Q psy16840        293 TIRAR  297 (413)
Q Consensus       293 ~i~~~  297 (413)
                      |++++
T Consensus       349 eaL~H  353 (361)
T 4f9c_A          349 EALLH  353 (361)
T ss_dssp             HHHTS
T ss_pred             HHhcC
Confidence            99865

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.97  E-value=1.2e-32  Score=274.99  Aligned_cols=142  Identities=17%  Similarity=0.228  Sum_probs=113.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC-CCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD-THAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~  217 (413)
                      ||+  .||+|||++|| |||||||+|||++.+|.+||+|||+|+.....     ...+.+||+.|||||++.+ ..+   
T Consensus       300 qIl--~aL~yLH~~gI-iHRDLKPeNILld~~G~vKL~DFGlA~~~~~~-----~~~t~~GTp~YmAPEvl~~~~~y---  368 (689)
T 3v5w_A          300 EII--LGLEHMHNRFV-VYRDLKPANILLDEHGHVRISDLGLACDFSKK-----KPHASVGTHGYMAPEVLQKGVAY---  368 (689)
T ss_dssp             HHH--HHHHHHHTTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----CCCSCCSCGGGCCHHHHSTTCCC---
T ss_pred             HHH--HHHHHHHHCCc-cccCCchHHeEEeCCCCEEecccceeeecCCC-----CCCCccCCcCccCHHHHhCCCCC---
Confidence            888  99999999999 99999999999999999999999999875432     2345689999999999964 455   


Q ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC----
Q psy16840        218 GTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD----  290 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps----  290 (413)
                       +.++|+|||||++|||++|..||.+.+......   .+....     ..++..+++++.+||.+||..||.+|++    
T Consensus       369 -~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~-----~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~  442 (689)
T 3v5w_A          369 -DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-----VELPDSFSPELRSLLEGLLQRDVNRRLGCLGR  442 (689)
T ss_dssp             -CTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCC-----CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSS
T ss_pred             -CcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC-----CCCCccCCHHHHHHHHHHccCCHhHCCCCCCC
Confidence             899999999999999999999997643221111   000011     1234678999999999999999999998    


Q ss_pred             -hhHHHHH
Q psy16840        291 -FPTIRAR  297 (413)
Q Consensus       291 -~~~i~~~  297 (413)
                       +++|+++
T Consensus       443 ga~ei~~H  450 (689)
T 3v5w_A          443 GAQEVKES  450 (689)
T ss_dssp             THHHHTTS
T ss_pred             CHHHHhcC
Confidence             5777654

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=3e-32  Score=261.91  Aligned_cols=212  Identities=19%  Similarity=0.271  Sum_probs=136.9

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccC------------------CCc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN------------------DSI  192 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~------------------~~~  192 (413)
                      +..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+|+.......                  ...
T Consensus       111 ~~~i~~--qi~--~~L~~LH~~~i-vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (388)
T 3oz6_A          111 KQYVVY--QLI--KVIKYLHSGGL-LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP  185 (388)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC-----------
T ss_pred             HHHHHH--HHH--HHHHHHHhCCE-EeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccc
Confidence            344455  788  99999999999 9999999999999999999999999976532110                  011


Q ss_pred             ccccccCcccccCcccccCC-CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-----------------
Q psy16840        193 GEHQYYRSLLWKAPELLRDT-HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC-----------------  254 (413)
Q Consensus       193 ~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~-----------------  254 (413)
                      .....+||+.|+|||++.+. .+    +.++|||||||++|||++|..||.+.+.......+.                 
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~----~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  261 (388)
T 3oz6_A          186 ILTDYVATRWYRAPEILLGSTKY----TKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSP  261 (388)
T ss_dssp             ----CCCGGGGCCHHHHTTCCCC----CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCS
T ss_pred             cccCCcccCCcCCHHHhcCCCCC----CChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCH
Confidence            12345799999999999763 34    899999999999999999999998754221111000                 


Q ss_pred             ----------------CCCCCCCcc---------cccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH--HhhcccCcc
Q psy16840        255 ----------------EEPFRPNLE---------LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL--KHMKDGKQK  307 (413)
Q Consensus       255 ----------------~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l--~~~~~~~~~  307 (413)
                                      ........+         .....+++++.+|+.+||..||.+|||+.+++++.  ..+......
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~~~~  341 (388)
T 3oz6_A          262 FAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEE  341 (388)
T ss_dssp             SHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCGGGC
T ss_pred             HHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCCccC
Confidence                            000000000         00126788999999999999999999999998763  322221110


Q ss_pred             cHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhH
Q psy16840        308 NIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKT  356 (413)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~le~~~~~le~~~~e~~~~l~~e~~~~  356 (413)
                      ......     -..+..+.....++++.+.+.+.+.+++.++..++.+.
T Consensus       342 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  385 (388)
T 3oz6_A          342 PNCDHI-----ITIPINDNVKHSIDDYRNLVYSEISRRKRELISNKHQN  385 (388)
T ss_dssp             CCCSSC-----CCCC------CCHHHHHHHHHHHHHHHHHHHTCC----
T ss_pred             CCCCCC-----CCCCccccccCCHHHHHHHHHHHHHHhhhhhhhhcccc
Confidence            000000     00011233445577888888888888888877776644

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.96  E-value=1.3e-31  Score=268.30  Aligned_cols=155  Identities=17%  Similarity=0.164  Sum_probs=122.8

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC--eEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR--WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~--~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      .+..++.  ||+  .||.|||++++ +||||||+|||++.+  +.+||+|||+|+......    .....+||+.|+|||
T Consensus       256 ~~~~~~~--qi~--~al~ylH~~~i-iHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~----~~~~~~GT~~y~APE  326 (573)
T 3uto_A          256 EAVEYMR--QVC--KGLCHMHENNY-VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----SVKVTTGTAEFAAPE  326 (573)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS----EEEEECSSGGGCCHH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCe-eeccCChhhccccCCCCCCEEEeeccceeEccCCC----ceeeeEECccccCHH
Confidence            3444555  888  99999999999 999999999999854  899999999998764321    234568999999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      ++.+..+    +.++||||+||++|||++|..||.+.+..+....+......... .....+++++.+||.+||..||.+
T Consensus       327 v~~~~~y----~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~s~~~~dli~~~L~~dp~~  401 (573)
T 3uto_A          327 VAEGKPV----GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD-SAFSGISEDGKDFIRKLLLADPNT  401 (573)
T ss_dssp             HHTTCCB----CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCS-GGGTTSCHHHHHHHHTTSCSSGGG
T ss_pred             HhCCCCC----CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCc-ccccCCCHHHHHHHHHHccCChhH
Confidence            9998877    99999999999999999999999876533322222222222211 123578999999999999999999


Q ss_pred             CCChhHHHHHH
Q psy16840        288 RPDFPTIRARL  298 (413)
Q Consensus       288 Rps~~~i~~~l  298 (413)
                      |||+.+++++-
T Consensus       402 R~t~~e~l~Hp  412 (573)
T 3uto_A          402 RMTIHQALEHP  412 (573)
T ss_dssp             SCCHHHHHHST
T ss_pred             CcCHHHHhcCc
Confidence            99999998753

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.96  E-value=2.9e-31  Score=255.71  Aligned_cols=162  Identities=17%  Similarity=0.170  Sum_probs=117.4

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC---CeEEEEeccccccccccccCCCcccccccCcccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS---RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+|||++.   ++.+||+|||+++......    .....+||+.|
T Consensus       159 ~~~~~~~i~~--qi~--~aL~~LH~~~i-vHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y  229 (400)
T 1nxk_A          159 TEREASEIMK--SIG--EAIQYLHSINI-AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN----SLTTPCYTPYY  229 (400)
T ss_dssp             BHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---------------CTT
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCc-cccCcCcceEEEecCCCCccEEEEecccccccCCCC----ccccCCCCCCc
Confidence            3344445555  777  99999999999 99999999999997   7899999999997653221    12355789999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC----CCCCCCCCCcccccCCChHHHHHHHHH
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE----DCEEPFRPNLELLRDSCEPFVLACMRD  279 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (413)
                      +|||++.+..+    +.++|||||||++|+|++|..||.+.........    +.........+ ....+++++.+||.+
T Consensus       230 ~aPE~~~~~~~----~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~  304 (400)
T 1nxk_A          230 VAPEVLGPEKY----DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP-EWSEVSEEVKMLIRN  304 (400)
T ss_dssp             CCGGGSCCCCS----SSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTT-TTTTSCHHHHHHHHT
T ss_pred             cCHhhcCCCCC----CCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCc-ccccCCHHHHHHHHH
Confidence            99999988776    8999999999999999999999976543221110    00011111111 114688999999999


Q ss_pred             HhccCCCCCCChhHHHHHHHhhc
Q psy16840        280 CWAEAPESRPDFPTIRARLKHMK  302 (413)
Q Consensus       280 cl~~~P~~Rps~~~i~~~l~~~~  302 (413)
                      ||..||.+|||+.+++++..-..
T Consensus       305 ~L~~dP~~Rpt~~eil~hp~~~~  327 (400)
T 1nxk_A          305 LLKTEPTQRMTITEFMNHPWIMQ  327 (400)
T ss_dssp             TSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             HCCCChhHCcCHHHHhcCccccC
Confidence            99999999999999998765443

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.96  E-value=1.2e-30  Score=244.52  Aligned_cols=159  Identities=23%  Similarity=0.340  Sum_probs=121.4

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++........ .......|++.|+|||++.
T Consensus       117 ~~~~~~--qi~--~~l~~lH~~~i-vH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  190 (325)
T 3kex_A          117 LLNWGV--QIA--KGMYYLEEHGM-VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ-LLYSEAKTPIKWMALESIH  190 (325)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC-CC-----CCTTTSCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHhCCC-CCCccchheEEECCCCeEEECCCCcccccCccccc-ccccCCCCcccccChHHhc
Confidence            344444  777  99999999999 99999999999999999999999999876433222 1223456788999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++|||||||++|+|++ |..||.+............ ..++.   .+..+++++.+++.+||..||.+||
T Consensus       191 ~~~~----~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rp  262 (325)
T 3kex_A          191 FGKY----THQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK-GERLA---QPQICTIDVYMVMVKCWMIDENIRP  262 (325)
T ss_dssp             HCCC----CHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHT-TCBCC---CCTTBCTTTTHHHHHHTCSCTTTSC
T ss_pred             cCCC----ChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHc-CCCCC---CCCcCcHHHHHHHHHHcCCChhhCc
Confidence            8776    999999999999999999 9999987543222111111 11111   1245677899999999999999999


Q ss_pred             ChhHHHHHHHhhcc
Q psy16840        290 DFPTIRARLKHMKD  303 (413)
Q Consensus       290 s~~~i~~~l~~~~~  303 (413)
                      |+.++++.|+.+..
T Consensus       263 s~~el~~~l~~~~~  276 (325)
T 3kex_A          263 TFKELANEFTRMAR  276 (325)
T ss_dssp             CHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHh
Confidence            99999999988754

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.96  E-value=8.8e-31  Score=241.94  Aligned_cols=168  Identities=13%  Similarity=0.224  Sum_probs=127.9

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEE---cCCeEEEEeccccccccccccCCC----cccccccCc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVV---TSRWVLQVTDFGLHELRHCAENDS----IGEHQYYRS  200 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill---~~~~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~gt  200 (413)
                      ...+..++.  ||+  .||.|||++|+ +||||||+|||+   +.++.+||+|||+++.........    .......||
T Consensus       104 ~~~~~~i~~--qi~--~~l~~LH~~~i-vH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt  178 (296)
T 4hgt_A          104 LKTVLLLAD--QMI--SRIEYIHSKNF-IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT  178 (296)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSC
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCe-ecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCC
Confidence            333444555  777  99999999999 999999999999   788999999999998764432211    122355789


Q ss_pred             ccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC---CCCCCCCCcccccCCChHHHHHHH
Q psy16840        201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED---CEEPFRPNLELLRDSCEPFVLACM  277 (413)
Q Consensus       201 ~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li  277 (413)
                      +.|+|||++.+..+    +.++|||||||++|+|++|..||.+..........   .........+.....+++++.+++
T Consensus       179 ~~y~aPE~~~~~~~----~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  254 (296)
T 4hgt_A          179 ARYASINTHLGIEQ----SRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYL  254 (296)
T ss_dssp             GGGCCHHHHTTCCC----CHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHH
T ss_pred             ccccchHHhcCCCC----CchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHH
Confidence            99999999988776    99999999999999999999999875432221110   001111222223356789999999


Q ss_pred             HHHhccCCCCCCChhHHHHHHHhhccc
Q psy16840        278 RDCWAEAPESRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       278 ~~cl~~~P~~Rps~~~i~~~l~~~~~~  304 (413)
                      .+||+.||++|||+.++++.|+.+...
T Consensus       255 ~~~l~~~p~~Rpt~~~l~~~l~~~~~~  281 (296)
T 4hgt_A          255 NFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             HHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence            999999999999999999999887653

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.96  E-value=9.5e-31  Score=249.59  Aligned_cols=163  Identities=26%  Similarity=0.399  Sum_probs=125.6

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++........ .......+|+.|+||
T Consensus       201 ~~~~~~~i~~--qi~--~aL~~LH~~~i-vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~t~~y~aP  274 (370)
T 2psq_A          201 TFKDLVSCTY--QLA--RGMEYLASQKC-IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY-KKTTNGRLPVKWMAP  274 (370)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTT-CTTTTTTSCGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCe-eccccchhhEEECCCCCEEEccccCCcccCcccce-ecccCCCcccceECH
Confidence            3333444555  777  99999999999 99999999999999999999999999865432211 122334578899999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |++.+..+    +.++|||||||++|||++ |..||.+.......... ....++.   .+..+++++.++|.+||+.||
T Consensus       275 E~~~~~~~----~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~l~~li~~~l~~dP  346 (370)
T 2psq_A          275 EALFDRVY----THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHRMD---KPANCTNELYMMMRDCWHAVP  346 (370)
T ss_dssp             HHHHTCCC----CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-HTTCCCC---CCTTSCHHHHHHHHHHTCSSG
T ss_pred             hHhcCCCC----CcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-hcCCCCC---CCCCCCHHHHHHHHHHcCCCh
Confidence            99988776    999999999999999999 99999875432211111 1111222   235788999999999999999


Q ss_pred             CCCCChhHHHHHHHhhcc
Q psy16840        286 ESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~~  303 (413)
                      .+|||+.++++.|+.+..
T Consensus       347 ~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          347 SQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             GGSCCHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHH
Confidence            999999999999987643

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.96  E-value=2.4e-31  Score=253.34  Aligned_cols=166  Identities=12%  Similarity=0.110  Sum_probs=123.6

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEc--CCeEEEEeccccccccccccCCC----cccccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVT--SRWVLQVTDFGLHELRHCAENDS----IGEHQYYRSLL  202 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~--~~~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~gt~~  202 (413)
                      ..+..++.  ||+  .||+|||++|+ +||||||+|||++  .++.+||+|||+++.........    .......||+.
T Consensus       152 ~~~~~i~~--qi~--~~l~~lH~~~i-iHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~  226 (364)
T 3op5_A          152 KTVLQLSL--RIL--DILEYIHEHEY-VHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIE  226 (364)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTT
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCe-EEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCC
Confidence            33344444  666  99999999999 9999999999999  88999999999998765432221    11234469999


Q ss_pred             ccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccc------cCCChHHHHHH
Q psy16840        203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELL------RDSCEPFVLAC  276 (413)
Q Consensus       203 y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~l  276 (413)
                      |+|||++.+..+    +.++|||||||++|||++|..||.+................+....+      ...+++++.++
T Consensus       227 y~aPE~~~~~~~----~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  302 (364)
T 3op5_A          227 FTSIDAHNGVAP----SRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKY  302 (364)
T ss_dssp             TCCHHHHTTCCC----CHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHH
T ss_pred             ccCHHHhCCCCC----CchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHH
Confidence            999999988876    99999999999999999999999753211100000000000111111      14678999999


Q ss_pred             HHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        277 MRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       277 i~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      +..||+.||.+||++.+|++.|+.+..
T Consensus       303 i~~cl~~~p~~RP~~~~l~~~l~~~~~  329 (364)
T 3op5_A          303 METVKLLDYTEKPLYENLRDILLQGLK  329 (364)
T ss_dssp             HHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence            999999999999999999999988754

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.96  E-value=3.6e-31  Score=253.25  Aligned_cols=160  Identities=26%  Similarity=0.466  Sum_probs=121.3

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......... ......+++.|+|||++
T Consensus       214 ~~~~~~~--qi~--~~l~~LH~~~i-vHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~-~~~~~~~~~~y~aPE~~  287 (377)
T 3cbl_A          214 TLLQMVG--DAA--AGMEYLESKCC-IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA-SGGLRQVPVKWTAPEAL  287 (377)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC-CSSCCEEEGGGSCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCc-CCcccCHHHEEEcCCCcEEECcCCCceecCCCceee-cCCCCCCCcCcCCHhHh
Confidence            3344444  777  99999999999 999999999999999999999999987643221111 11122356789999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      .+..+    +.++|||||||++|||++ |..||.+.......... ....++.   .+..+++.+.++|.+||+.||.+|
T Consensus       288 ~~~~~----~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~R  359 (377)
T 3cbl_A          288 NYGRY----SSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV-EKGGRLP---CPELCPDAVFRLMEQCWAYEPGQR  359 (377)
T ss_dssp             HHCEE----EHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHH-HTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             ccCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCC---CCCCCCHHHHHHHHHHcCCCchhC
Confidence            87776    899999999999999998 99999765422211111 1111121   235688999999999999999999


Q ss_pred             CChhHHHHHHHhhcc
Q psy16840        289 PDFPTIRARLKHMKD  303 (413)
Q Consensus       289 ps~~~i~~~l~~~~~  303 (413)
                      ||+.++++.|+.+..
T Consensus       360 ps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          360 PSFSTIYQELQSIRK  374 (377)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHh
Confidence            999999999987754

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.96  E-value=7.5e-31  Score=242.70  Aligned_cols=168  Identities=11%  Similarity=0.140  Sum_probs=126.9

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeE-----EEEeccccccccccccCCC----ccccccc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWV-----LQVTDFGLHELRHCAENDS----IGEHQYY  198 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~-----~kl~Dfg~a~~~~~~~~~~----~~~~~~~  198 (413)
                      ...+..++.  ||+  .||+|||++|+ +||||||+|||++.++.     +||+|||+++.........    .......
T Consensus       105 ~~~~~~i~~--qi~--~~l~~lH~~~i-vH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~  179 (298)
T 1csn_A          105 VKTVAMAAK--QML--ARVQSIHEKSL-VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLS  179 (298)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHTTTE-ECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCC
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCE-ecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCC
Confidence            333444455  777  99999999999 99999999999987765     9999999998765432211    1234557


Q ss_pred             CcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCCCCCCcccccCCChHHHHH
Q psy16840        199 RSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---EDCEEPFRPNLELLRDSCEPFVLA  275 (413)
Q Consensus       199 gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~  275 (413)
                      ||+.|+|||++.+..+    +.++||||||+++|+|++|+.||.+........   ........+..+.....+++++.+
T Consensus       180 gt~~y~aPE~~~~~~~----~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  255 (298)
T 1csn_A          180 GTARYMSINTHLGREQ----SRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYK  255 (298)
T ss_dssp             SCTTTCCHHHHTTCCC----CHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHH
T ss_pred             CCcccCCchhhcCCCC----ChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHH
Confidence            8999999999988776    999999999999999999999998643211110   000011112223334578999999


Q ss_pred             HHHHHhccCCCCCCChhHHHHHHHhhccc
Q psy16840        276 CMRDCWAEAPESRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       276 li~~cl~~~P~~Rps~~~i~~~l~~~~~~  304 (413)
                      ++.+||+.||.+|||+.+|++.|+.+...
T Consensus       256 li~~~l~~dp~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          256 YMHYARNLAFDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             HHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence            99999999999999999999999887653

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.96  E-value=1.6e-30  Score=240.26  Aligned_cols=170  Identities=13%  Similarity=0.223  Sum_probs=128.5

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEE---cCCeEEEEeccccccccccccCCC----cccccccC
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVV---TSRWVLQVTDFGLHELRHCAENDS----IGEHQYYR  199 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill---~~~~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~g  199 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||+   +.++.+||+|||++..........    .......|
T Consensus       103 ~~~~~~~i~~--qi~--~~l~~lH~~~i-vH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~g  177 (296)
T 3uzp_A          103 SLKTVLLLAD--QMI--SRIEYIHSKNF-IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTG  177 (296)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCS
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCe-eeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccccccccccccccc
Confidence            3334444555  777  99999999999 999999999999   478899999999998764432211    11245578


Q ss_pred             cccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC---CCCCCCCCCcccccCCChHHHHHH
Q psy16840        200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE---DCEEPFRPNLELLRDSCEPFVLAC  276 (413)
Q Consensus       200 t~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l  276 (413)
                      |+.|+|||++.+..+    +.++|||||||++|+|++|+.||.+.........   ..........+.....+++++.++
T Consensus       178 t~~y~aPE~~~~~~~----~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  253 (296)
T 3uzp_A          178 TARYASINTHLGIEQ----SRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATY  253 (296)
T ss_dssp             CTTTCCHHHHTTCCC----CHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHH
T ss_pred             ccccCChhhhcCCCC----CcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHH
Confidence            999999999988776    9999999999999999999999986442221110   001111122223346788999999


Q ss_pred             HHHHhccCCCCCCChhHHHHHHHhhcccC
Q psy16840        277 MRDCWAEAPESRPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       277 i~~cl~~~P~~Rps~~~i~~~l~~~~~~~  305 (413)
                      +.+||+.||.+|||+.++++.|+.+....
T Consensus       254 i~~~l~~dp~~Rps~~~l~~~l~~~~~~~  282 (296)
T 3uzp_A          254 LNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             HHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence            99999999999999999999998876543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.96  E-value=1.1e-30  Score=243.13  Aligned_cols=161  Identities=31%  Similarity=0.498  Sum_probs=116.4

Q ss_pred             hHhhhccccCCchHHhhHhhhcCC--CcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSP--IGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~--iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      .+..++.  ||+  .||+|||++|  + +||||||+|||++.++.+||+|||+++......   .......||+.|+|||
T Consensus       138 ~~~~i~~--qi~--~aL~~LH~~~~~i-vH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE  209 (309)
T 3p86_A          138 RRLSMAY--DVA--KGMNYLHNRNPPI-VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF---LSSKSAAGTPEWMAPE  209 (309)
T ss_dssp             HHHHHHH--HHH--HHHHHHHTSSSCC-CCTTCCGGGEEECTTCCEEECCCC--------------------CCTTSCHH
T ss_pred             HHHHHHH--HHH--HHHHHHHcCCCCE-ECCCCChhhEEEeCCCcEEECCCCCCccccccc---cccccCCCCccccChh
Confidence            3344445  777  9999999999  8 999999999999999999999999987543221   1233457899999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      ++.+..+    +.++|||||||++|+|++|..||.+...............+.   ..+..+++.+.++|.+||+.||.+
T Consensus       210 ~~~~~~~----~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~  282 (309)
T 3p86_A          210 VLRDEPS----NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL---EIPRNLNPQVAAIIEGCWTNEPWK  282 (309)
T ss_dssp             HHTTCCC----CTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCC---CCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             hhcCCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC---CCCccCCHHHHHHHHHHccCChhh
Confidence            9988876    899999999999999999999997644221111110011111   223578899999999999999999


Q ss_pred             CCChhHHHHHHHhhcccC
Q psy16840        288 RPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       288 Rps~~~i~~~l~~~~~~~  305 (413)
                      |||+.++++.|+.+....
T Consensus       283 Rps~~~ll~~L~~~~~~~  300 (309)
T 3p86_A          283 RPSFATIMDLLRPLIKSA  300 (309)
T ss_dssp             SCCHHHHHHHHHHHHC--
T ss_pred             CcCHHHHHHHHHHHHHhC
Confidence            999999999999887654

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.96  E-value=1.8e-30  Score=247.90  Aligned_cols=145  Identities=11%  Similarity=0.001  Sum_probs=112.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC--CCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD--THAPI  216 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~  216 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....      .....+|+.|+|||++.+  ..+  
T Consensus       202 qi~--~aL~~LH~~~i-vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~--  270 (371)
T 3q60_A          202 QLI--RLAANLQSKGL-VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR------GPASSVPVTYAPREFLNASTATF--  270 (371)
T ss_dssp             HHH--HHHHHHHHTTE-EETTCSGGGEEECTTSCEEECCGGGEEETTCE------EEGGGSCGGGCCHHHHTCSEEEC--
T ss_pred             HHH--HHHHHHHHCCC-ccCcCCHHHEEECCCCCEEEEecceeeecCCC------ccCccCCcCCcChhhccCCCCCc--
Confidence            677  99999999999 99999999999999999999999999765321      113456799999999977  445  


Q ss_pred             CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--C---CCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--E---DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       217 ~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                        +.++|||||||++|||++|+.||.+........  .   ..........+ ....+++.+.+||.+||+.||++|||+
T Consensus       271 --~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~  347 (371)
T 3q60_A          271 --THALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFG-SCTPLPDFVKTLIGRFLNFDRRRRLLP  347 (371)
T ss_dssp             --CHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCT-TSSCCCHHHHHHHHHHTCSSTTTCCCH
T ss_pred             --CccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchh-hccCCCHHHHHHHHHHcCCChhhCCCH
Confidence              999999999999999999999998764221111  0   00111111111 124789999999999999999999999


Q ss_pred             hHHHHH
Q psy16840        292 PTIRAR  297 (413)
Q Consensus       292 ~~i~~~  297 (413)
                      .+++++
T Consensus       348 ~e~l~h  353 (371)
T 3q60_A          348 LEAMET  353 (371)
T ss_dssp             HHHTTS
T ss_pred             HHHhcC
Confidence            999754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.96  E-value=1.5e-30  Score=244.23  Aligned_cols=159  Identities=23%  Similarity=0.350  Sum_probs=121.8

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++........ .......+|+.|+|||++.
T Consensus       119 ~~~~~~--qi~--~~l~~LH~~~i-vH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~  192 (327)
T 3poz_A          119 LLNWCV--QIA--KGMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHAEGGKVPIKWMALESIL  192 (327)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC--------CCCGGGSCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHhhCCe-eCCCCChheEEECCCCCEEEccCcceeEccCCccc-ccccCCCccccccChHHhc
Confidence            344444  777  99999999999 99999999999999999999999999876433221 1223345688999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++|||||||++|||++ |..||.+........... ...++.   .+..++..+.+++.+||+.||.+||
T Consensus       193 ~~~~----~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp  264 (327)
T 3poz_A          193 HRIY----THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGERLP---QPPICTIDVYMIMVKCWMIDADSRP  264 (327)
T ss_dssp             HCCC----CHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCCC---CCTTBCHHHHHHHHHHTCSCGGGSC
T ss_pred             cCCC----CchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHH-cCCCCC---CCccCCHHHHHHHHHHcCCChhhCC
Confidence            8776    999999999999999999 999998654322111111 111111   2356788999999999999999999


Q ss_pred             ChhHHHHHHHhhcc
Q psy16840        290 DFPTIRARLKHMKD  303 (413)
Q Consensus       290 s~~~i~~~l~~~~~  303 (413)
                      |+.++++.|+.+..
T Consensus       265 s~~ell~~l~~~~~  278 (327)
T 3poz_A          265 KFRELIIEFSKMAR  278 (327)
T ss_dssp             CHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHh
Confidence            99999999988754

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.96  E-value=1e-30  Score=245.11  Aligned_cols=166  Identities=22%  Similarity=0.366  Sum_probs=125.0

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++................+|+.|+||
T Consensus       149 ~~~~~~~i~~--qi~--~~L~~LH~~~i-vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aP  223 (325)
T 3kul_A          149 TIMQLVGMLR--GVG--AGMRYLSDLGY-VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP  223 (325)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCe-eCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCH
Confidence            3334444555  777  99999999999 999999999999999999999999998765433332233344567889999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |++.+..+    +.++||||||+++|+|++ |..||.+............ ..++.   .+..+++.+.++|.+||..||
T Consensus       224 E~~~~~~~----~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~l~~li~~~l~~dp  295 (325)
T 3kul_A          224 EAIAFRTF----SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE-GYRLP---APMGCPHALHQLMLDCWHKDR  295 (325)
T ss_dssp             HHHHHCEE----CHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT-TCCCC---CCTTCCHHHHHHHHHHTCSSG
T ss_pred             hHhcCCCC----CcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc-CCCCC---CCCCcCHHHHHHHHHHccCCh
Confidence            99988776    899999999999999999 9999976442221111111 11111   235788999999999999999


Q ss_pred             CCCCChhHHHHHHHhhcccC
Q psy16840        286 ESRPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~~~~  305 (413)
                      .+|||+.++++.|+.+....
T Consensus       296 ~~Rps~~eil~~L~~l~~~~  315 (325)
T 3kul_A          296 AQRPRFSQIVSVLDALIRSP  315 (325)
T ss_dssp             GGSCCHHHHHHHHHHHHHSC
T ss_pred             hhCcCHHHHHHHHHHHHhCc
Confidence            99999999999999886544

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.96  E-value=4e-30  Score=238.17  Aligned_cols=166  Identities=25%  Similarity=0.425  Sum_probs=120.2

Q ss_pred             HhhhccccCCchHHhhHhhh--------cCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC-cccccccCcc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLH--------RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSL  201 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH--------~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~  201 (413)
                      +..++.  ||+  .||+|||        ++++ +||||||+|||++.++.+||+|||+++......... .......||+
T Consensus       107 ~~~i~~--~i~--~~l~~lH~~~~~~~~~~~i-vH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~  181 (301)
T 3q4u_A          107 CLRIVL--SIA--SGLAHLHIEIFGTQGKPAI-AHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK  181 (301)
T ss_dssp             HHHHHH--HHH--HHHHHHHSCBCSTTCBCEE-ECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCG
T ss_pred             HHHHHH--HHH--HHHHHHHHhhhhccCCCCe-ecCCCChHhEEEcCCCCEEEeeCCCeeeccccccccccccccccccc
Confidence            334444  666  9999999        9999 999999999999999999999999997654332211 1123447899


Q ss_pred             cccCcccccCCCCCC--CCCccchhHHHHHHHHHHHhC----------CCCCCCCCCCCCCC-----CCCCCCCCCCcc-
Q psy16840        202 LWKAPELLRDTHAPI--RGTQKADVYAFAVILHEIIGR----------RGPFGGCGLYEPKG-----EDCEEPFRPNLE-  263 (413)
Q Consensus       202 ~y~aPE~~~~~~~~~--~~~~~~Dv~slG~il~el~~g----------~~pf~~~~~~~~~~-----~~~~~~~~~~~~-  263 (413)
                      .|+|||++.+.....  .++.++|||||||++|||++|          ..||..........     .......++..+ 
T Consensus       182 ~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (301)
T 3q4u_A          182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPN  261 (301)
T ss_dssp             GGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG
T ss_pred             ceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCCh
Confidence            999999998763210  125799999999999999999          77775533222111     011111122221 


Q ss_pred             -cccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhh
Q psy16840        264 -LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM  301 (413)
Q Consensus       264 -~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~  301 (413)
                       .....+++.+.+++.+||+.||.+|||+.++++.|+++
T Consensus       262 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          262 RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence             12344678999999999999999999999999999875

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.96  E-value=1.3e-30  Score=245.02  Aligned_cols=164  Identities=13%  Similarity=0.150  Sum_probs=122.9

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeE-----EEEeccccccccccccCCC----cccccccCc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWV-----LQVTDFGLHELRHCAENDS----IGEHQYYRS  200 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~-----~kl~Dfg~a~~~~~~~~~~----~~~~~~~gt  200 (413)
                      .+..++.  ||+  .||+|||++|+ +||||||+|||++.++.     +||+|||+++.........    .......||
T Consensus       106 ~~~~i~~--qi~--~~l~~LH~~~i-iHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt  180 (330)
T 2izr_A          106 TVLMIAI--QLI--SRMEYVHSKNL-IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGT  180 (330)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSC
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCe-eccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCC
Confidence            3344444  777  99999999999 99999999999998887     9999999998754332211    112456799


Q ss_pred             ccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCCCCCCcccccCCChHHHHHHH
Q psy16840        201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---EDCEEPFRPNLELLRDSCEPFVLACM  277 (413)
Q Consensus       201 ~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li  277 (413)
                      +.|+|||++.+..+    +.++|||||||++|||++|..||.+........   .+...............+| ++.+++
T Consensus       181 ~~y~aPE~~~~~~~----~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li  255 (330)
T 2izr_A          181 ARYMSINTHLGKEQ----SRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYL  255 (330)
T ss_dssp             TTTCCHHHHTTCCC----CHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHH
T ss_pred             ccccChHHHcCCCC----CchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHH
Confidence            99999999998776    999999999999999999999998754221110   0000001111122223456 999999


Q ss_pred             HHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        278 RDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       278 ~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      ..||+.||.+||++.+|.+.|+.+..
T Consensus       256 ~~~l~~~p~~RP~~~~l~~~l~~~~~  281 (330)
T 2izr_A          256 RYVRRLDFFEKPDYDYLRKLFTDLFD  281 (330)
T ss_dssp             HHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999987654

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.96  E-value=9.9e-31  Score=251.59  Aligned_cols=159  Identities=19%  Similarity=0.316  Sum_probs=119.3

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEc-CCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVT-SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||++ .++.+||+|||+++.......    .....||+.|+|
T Consensus       139 ~~~~~~~~~~--qi~--~aL~~LH~~~i-vHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~----~~~~~~t~~y~a  209 (394)
T 4e7w_A          139 PMLLIKLYMY--QLL--RSLAYIHSIGI-CHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP----NVSYICSRYYRA  209 (394)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC----CCSSCSCGGGCC
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCc-cCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCC----CcccccCcCccC
Confidence            3334445555  888  99999999999 9999999999999 789999999999987533221    234578999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-----------------------CCC-CCCCCCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----------------------EDC-EEPFRPN  261 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-----------------------~~~-~~~~~~~  261 (413)
                      ||++.+...   ++.++|||||||++|||++|+.||.+.+......                       ... .....+.
T Consensus       210 PE~~~~~~~---~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~  286 (394)
T 4e7w_A          210 PELIFGATN---YTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPF  286 (394)
T ss_dssp             HHHHTTCSS---CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCH
T ss_pred             HHHHcCCCC---CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcH
Confidence            999876542   2899999999999999999999998754211000                       000 0001111


Q ss_pred             cccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ...++..+++++.+|+.+||+.||.+|||+.+++.+
T Consensus       287 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          287 SKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             HHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence            122334588999999999999999999999999875

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.96  E-value=2.4e-30  Score=239.11  Aligned_cols=166  Identities=14%  Similarity=0.236  Sum_probs=122.7

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  |++  .||+|||++|+ +||||||+|||++.++.+||+|||++.......  ........||+.|+|||.+
T Consensus       112 ~~~~~~~--qi~--~~l~~lH~~~i-~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~gt~~y~aPE~~  184 (294)
T 4eqm_A          112 TAINFTN--QIL--DGIKHAHDMRI-VHRDIKPQNILIDSNKTLKIFDFGIAKALSETS--LTQTNHVLGTVQYFSPEQA  184 (294)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTSCEEECCCSSSTTC---------------CCSSCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEEeCCCcccccccc--ccccCccccCccccCHhHh
Confidence            3344444  777  99999999999 999999999999999999999999987654322  1123345789999999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .+..+    +.++||||||+++|+|++|+.||.+......................+..+++.+.+++.+||+.||.+||
T Consensus       185 ~~~~~----~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~  260 (294)
T 4eqm_A          185 KGEAT----DECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRY  260 (294)
T ss_dssp             HTCCC----CTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             cCCCC----CchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHcc
Confidence            88776    89999999999999999999999765422211111111212222233467899999999999999999998


Q ss_pred             -ChhHHHHHHHhhcccCc
Q psy16840        290 -DFPTIRARLKHMKDGKQ  306 (413)
Q Consensus       290 -s~~~i~~~l~~~~~~~~  306 (413)
                       ++.++.+.|..+.....
T Consensus       261 ~~~~~l~~~l~~~~~~~~  278 (294)
T 4eqm_A          261 KTIQEMKDDLSSVLHENR  278 (294)
T ss_dssp             SSHHHHHHHHHTSSSSSS
T ss_pred             ccHHHHHHHHHHHHhhcc
Confidence             89999999988766543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.96  E-value=1.6e-30  Score=248.74  Aligned_cols=136  Identities=15%  Similarity=0.019  Sum_probs=108.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCC------
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDT------  212 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------  212 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++....      ......| +.|+|||++.+.      
T Consensus       214 qi~--~aL~~LH~~~i-vHrDikp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~g-~~y~aPE~~~~~~~~~~~  283 (377)
T 3byv_A          214 QVI--RLLASLHHYGL-VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA------RVVSSVS-RGFEPPELEARRATISYH  283 (377)
T ss_dssp             HHH--HHHHHHHHTTE-ECSCCCGGGEEECTTCCEEECCGGGCEETTC------EEECCCC-TTCCCHHHHHHHTSTHHH
T ss_pred             HHH--HHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEEechhheecCC------cccCCCC-cCccChhhhccccccccc
Confidence            666  99999999999 9999999999999999999999999875321      1234567 899999999877      


Q ss_pred             -----CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        213 -----HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       213 -----~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                           .+    +.++|||||||++|||++|..||.+............         ....+++++.++|.+||+.||.+
T Consensus       284 ~~~~~~~----~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~~L~~dp~~  350 (377)
T 3byv_A          284 RDRRTLM----TFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFR---------SCKNIPQPVRALLEGFLRYPKED  350 (377)
T ss_dssp             HCCEEEC----CHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGS---------SCCCCCHHHHHHHHHHTCSSGGG
T ss_pred             ccccccC----ChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhh---------hccCCCHHHHHHHHHHcCCCchh
Confidence                 55    9999999999999999999999976543322221111         11467899999999999999999


Q ss_pred             CCChhHHHHH
Q psy16840        288 RPDFPTIRAR  297 (413)
Q Consensus       288 Rps~~~i~~~  297 (413)
                      |||+.++++.
T Consensus       351 Rpt~~e~l~h  360 (377)
T 3byv_A          351 RLLPLQAMET  360 (377)
T ss_dssp             CCCHHHHHTS
T ss_pred             CCCHHHHhhC
Confidence            9999999864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.96  E-value=3.7e-30  Score=239.64  Aligned_cols=164  Identities=25%  Similarity=0.342  Sum_probs=122.2

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCc-----------ccccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI-----------GEHQY  197 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-----------~~~~~  197 (413)
                      ..+..++.  |++  .||+|||++|+ +||||||+|||++.++.+||+|||++...........           .....
T Consensus       108 ~~~~~i~~--qi~--~al~~lH~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (310)
T 3s95_A          108 SQRVSFAK--DIA--SGMAYLHSMNI-IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV  182 (310)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCC
T ss_pred             HHHHHHHH--HHH--HHHHHHHhCCc-cCCCCCcCeEEECCCCCEEEeecccceeccccccccccccccccccccccccc
Confidence            33344444  777  99999999999 9999999999999999999999999986543322110           11245


Q ss_pred             cCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHH
Q psy16840        198 YRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACM  277 (413)
Q Consensus       198 ~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (413)
                      .||+.|+|||++.+..+    +.++||||||+++|+|++|..||................  ......+..+++.+.+++
T Consensus       183 ~gt~~y~aPE~~~~~~~----~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li  256 (310)
T 3s95_A          183 VGNPYWMAPEMINGRSY----DEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRG--FLDRYCPPNCPPSFFPIT  256 (310)
T ss_dssp             CSCGGGCCHHHHTTCCC----CTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHH--HHHHTCCTTCCTTHHHHH
T ss_pred             CCCcceeCHHHhcCCCC----CcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhc--cccccCCCCCCHHHHHHH
Confidence            78999999999988776    899999999999999999999987643222111110000  000112356788999999


Q ss_pred             HHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        278 RDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       278 ~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      .+||+.||++|||+.++++.|+.+..
T Consensus       257 ~~~l~~dP~~Rps~~~l~~~L~~l~~  282 (310)
T 3s95_A          257 VRCCDLDPEKRPSFVKLEHWLETLRM  282 (310)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHccCChhhCcCHHHHHHHHHHHHH
Confidence            99999999999999999999987754

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.96  E-value=3.9e-30  Score=237.04  Aligned_cols=167  Identities=26%  Similarity=0.439  Sum_probs=115.8

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++........ ........||+.|+|||++
T Consensus       121 ~~~~i~~--qi~--~~L~~lH~~~i-~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~  194 (289)
T 3og7_A          121 KLIDIAR--QTA--RGMDYLHAKSI-IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVI  194 (289)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEEETTTEEEECCCC-------------------CCCTTCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCc-ccccCccceEEECCCCCEEEccceeccccccccc-cccccccCCCccccCchhh
Confidence            3344455  777  99999999999 9999999999999999999999999876532211 1122345689999999998


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-CCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      ..... ..++.++||||||+++|+|++|..||.+........ ........+........+++.+.+++.+||+.||.+|
T Consensus       195 ~~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  273 (289)
T 3og7_A          195 RMQDS-NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDER  273 (289)
T ss_dssp             C-----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             cccCC-CCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhC
Confidence            63211 123889999999999999999999997643221111 0111112233333446789999999999999999999


Q ss_pred             CChhHHHHHHHhhcc
Q psy16840        289 PDFPTIRARLKHMKD  303 (413)
Q Consensus       289 ps~~~i~~~l~~~~~  303 (413)
                      ||+.++++.|+.+..
T Consensus       274 ps~~ell~~L~~l~~  288 (289)
T 3og7_A          274 PSFPRILAEIEELAR  288 (289)
T ss_dssp             CCHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHhh
Confidence            999999999988754

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.96  E-value=7.8e-30  Score=238.77  Aligned_cols=161  Identities=20%  Similarity=0.306  Sum_probs=119.4

Q ss_pred             CCchHHhhHhhhcC----------CCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        139 DGIPRQGMTFLHRS----------PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       139 ~i~~a~gL~yLH~~----------~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      |++  .||+|||+.          ++ +||||||+|||++.++.+||+|||+++....... ........||+.|+|||+
T Consensus       129 qi~--~al~~LH~~~~~l~~~~~~~i-vH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~-~~~~~~~~gt~~y~aPE~  204 (322)
T 3soc_A          129 TMA--RGLAYLHEDIPGLKDGHKPAI-SHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS-AGDTHGQVGTRRYMAPEV  204 (322)
T ss_dssp             HHH--HHHHHHTCCEEEETTEEECEE-ECSCCSGGGEEECTTCCEEECCCTTCEEECTTSC-CCCCTTCCCCGGGCCHHH
T ss_pred             HHH--HHHHHHHhhccccccccCCCE-EeCCCChHhEEECCCCeEEEccCCcccccccccC-ccccccCccCccccCHhh
Confidence            666  999999999          99 9999999999999999999999999977643322 122334578999999999


Q ss_pred             ccCCCCC-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC----------------CCCCCCCCCcccc--cCCC
Q psy16840        209 LRDTHAP-IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE----------------DCEEPFRPNLELL--RDSC  269 (413)
Q Consensus       209 ~~~~~~~-~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~----------------~~~~~~~~~~~~~--~~~~  269 (413)
                      +.+.... ..++.++|||||||++|||++|..||.+.........                ......+|..+..  ...+
T Consensus       205 ~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (322)
T 3soc_A          205 LEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAG  284 (322)
T ss_dssp             HTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHH
T ss_pred             cccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccch
Confidence            9874221 1126789999999999999999999976442211110                1111222222211  1234


Q ss_pred             hHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        270 EPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       270 ~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      ++++.++|.+||+.||.+|||+.++++.|+.+..
T Consensus       285 ~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          285 MAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             HHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            5679999999999999999999999999988754

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.96  E-value=4.3e-30  Score=241.00  Aligned_cols=160  Identities=23%  Similarity=0.362  Sum_probs=117.9

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++........ .......+|+.|+|||++.
T Consensus       119 ~~~i~~--qi~--~aL~~LH~~~i-vH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~  192 (327)
T 3lzb_A          119 LLNWCV--QIA--KGMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHAEGGKVPIKWMALESIL  192 (327)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEEEETTEEEECCTTC-----------------CCCGGGSCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHhhCCC-cCCCCCHHHEEEcCCCCEEEccCcceeEccCcccc-ccccCCCccccccCHHHHc
Confidence            344444  777  99999999999 99999999999999999999999999876433221 1223345688999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++|||||||++|+|++ |..||.+............ ...+.   .+..+++++.+++.+||+.||.+||
T Consensus       193 ~~~~----~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rp  264 (327)
T 3lzb_A          193 HRIY----THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-GERLP---QPPICTIDVYMIMRKCWMIDADSRP  264 (327)
T ss_dssp             HCCC----CHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-TCCCC---CCTTBCHHHHHHHHHHTCSSGGGSC
T ss_pred             CCCC----ChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-CCCCC---CCccCCHHHHHHHHHHcCCChhHCc
Confidence            8776    999999999999999999 9999987543222111111 11111   2356888999999999999999999


Q ss_pred             ChhHHHHHHHhhccc
Q psy16840        290 DFPTIRARLKHMKDG  304 (413)
Q Consensus       290 s~~~i~~~l~~~~~~  304 (413)
                      |+.++++.|+.+...
T Consensus       265 s~~ell~~L~~~~~~  279 (327)
T 3lzb_A          265 KFRELIIEFSKMARD  279 (327)
T ss_dssp             CHHHHHHHHHHHHTS
T ss_pred             CHHHHHHHHHHHHhC
Confidence            999999999987653

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.96  E-value=4.9e-30  Score=240.15  Aligned_cols=163  Identities=26%  Similarity=0.380  Sum_probs=118.1

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++........ .......+++.|+|||.
T Consensus       137 ~~~~~i~~--qi~--~al~~LH~~~i-vH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~  210 (323)
T 3qup_A          137 QTLVRFMV--DIA--CGMEYLSSRNF-IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY-RQGCASKLPVKWLALES  210 (323)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEECTTSCEEECCCCC------------------CCGGGCCHHH
T ss_pred             HHHHHHHH--HHH--HHHHHHHcCCc-ccCCCCcceEEEcCCCCEEEeeccccccccccccc-cccccccCcccccCchh
Confidence            33444444  777  99999999999 99999999999999999999999999765433211 11223456788999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      +.+..+    +.++|||||||++|+|++ |..||.+.............. .+   ..+..+++.+.+++.+||+.||.+
T Consensus       211 ~~~~~~----~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~l~~li~~~l~~dp~~  282 (323)
T 3qup_A          211 LADNLY----TVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN-RL---KQPPECMEEVYDLMYQCWSADPKQ  282 (323)
T ss_dssp             HHHCCC----CHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-CC---CCCTTCCHHHHHHHHHTTCSSGGG
T ss_pred             hcCCCC----CCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCC-CC---CCCCccCHHHHHHHHHHccCChhh
Confidence            988776    999999999999999999 999998754322211111111 11   123568899999999999999999


Q ss_pred             CCChhHHHHHHHhhcccC
Q psy16840        288 RPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       288 Rps~~~i~~~l~~~~~~~  305 (413)
                      |||+.++++.|+.+....
T Consensus       283 Rps~~~l~~~l~~~l~~~  300 (323)
T 3qup_A          283 RPSFTCLRMELENILGHL  300 (323)
T ss_dssp             SCCHHHHHHHHHHHHHC-
T ss_pred             CcCHHHHHHHHHHHHHHh
Confidence            999999999999876543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.96  E-value=6.1e-30  Score=236.72  Aligned_cols=156  Identities=17%  Similarity=0.264  Sum_probs=119.8

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  |++  .||+|||++|+ +||||||+|||++.++.+||+|||++........   ......||+.|+|||+
T Consensus       116 ~~~~~~~~--qi~--~~l~~lH~~~i-~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~  187 (297)
T 3fxz_A          116 GQIAAVCR--ECL--QALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRSTMVGTPYWMAPEV  187 (297)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC---CBCCCCSCGGGCCHHH
T ss_pred             HHHHHHHH--HHH--HHHHHHHhCCc-eeCCCCHHHEEECCCCCEEEeeCCCceecCCccc---ccCCccCCcCccChhh
Confidence            33444555  777  99999999999 9999999999999999999999999876543221   2344578999999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      +.+..+    +.++|||||||++|+|++|..||.+.............. .+.. ..+..+++.+.+++.+||+.||.+|
T Consensus       188 ~~~~~~----~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~li~~~l~~dp~~R  261 (297)
T 3fxz_A          188 VTRKAY----GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG-TPEL-QNPEKLSAIFRDFLNRCLEMDVEKR  261 (297)
T ss_dssp             HHCSCB----CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHC-SCCC-SCGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             hcCCCC----CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCC-CCccccCHHHHHHHHHHccCChhHC
Confidence            988877    899999999999999999999997643211110000000 0111 1235688899999999999999999


Q ss_pred             CChhHHHHHH
Q psy16840        289 PDFPTIRARL  298 (413)
Q Consensus       289 ps~~~i~~~l  298 (413)
                      ||+.++++..
T Consensus       262 ps~~ell~h~  271 (297)
T 3fxz_A          262 GSAKELLQHQ  271 (297)
T ss_dssp             CCHHHHTTCG
T ss_pred             cCHHHHhhCh
Confidence            9999998753

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.96  E-value=2.1e-29  Score=236.77  Aligned_cols=152  Identities=19%  Similarity=0.217  Sum_probs=120.9

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      ...++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.......    .....+||+.|+|||++.
T Consensus       110 ~~~i~~--qi~--~aL~~LH~~gi-vH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~----~~~~~~gt~~y~aPE~~~  180 (336)
T 3h4j_B          110 GRRFFQ--QII--CAIEYCHRHKI-VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVIN  180 (336)
T ss_dssp             HHHHHH--HHH--HHHHHHHHHTC-CCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB----TTCCCTTSTTTSCGGGSC
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-EecCCchhhEEEcCCCCEEEEEeccceeccCCc----ccccccCCcCcCCHHHHc
Confidence            334444  777  99999999999 999999999999999999999999987654322    123457899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +..+.   +.++|||||||++|+|++|..||.+..............     ...+..+++.+.++|.+||..||.+|||
T Consensus       181 ~~~~~---~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~-----~~~p~~~s~~~~~li~~~L~~dP~~Rpt  252 (336)
T 3h4j_B          181 GKLYA---GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCV-----YVMPDFLSPGAQSLIRRMIVADPMQRIT  252 (336)
T ss_dssp             CSGGG---CHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSC-----CCCCTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             CCCCC---CCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCC-----CCCcccCCHHHHHHHHHHcCCChhHCcC
Confidence            77642   689999999999999999999998755333332222111     1234568899999999999999999999


Q ss_pred             hhHHHHHHH
Q psy16840        291 FPTIRARLK  299 (413)
Q Consensus       291 ~~~i~~~l~  299 (413)
                      +.++++...
T Consensus       253 ~~eil~hp~  261 (336)
T 3h4j_B          253 IQEIRRDPW  261 (336)
T ss_dssp             HHHHTTCHH
T ss_pred             HHHHHhChh
Confidence            999987644

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.96  E-value=3.6e-29  Score=230.47  Aligned_cols=157  Identities=15%  Similarity=0.207  Sum_probs=113.9

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++........   ......||+.|+|||++
T Consensus       101 ~~~~~~~--qi~--~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~t~~y~aPE~~  172 (288)
T 1ob3_A          101 TAKSFLL--QLL--NGIAYCHDRRV-LHRDLKPQNLLINREGELKIADFGLARAFGIPVR---KYTHEIVTLWYRAPDVL  172 (288)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEECTTSCEEECCTTHHHHHCC------------CCCTTCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCe-ecCCCCHHHEEEcCCCCEEEeECccccccCcccc---ccccccccccccCchhe
Confidence            3444555  788  99999999999 9999999999999999999999999876532211   12344689999999998


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC----------------C--------CCCCCCCCCCcccc
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK----------------G--------EDCEEPFRPNLELL  265 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~----------------~--------~~~~~~~~~~~~~~  265 (413)
                      .+...   ++.++|||||||++|+|++|..||.+.+.....                .        ..............
T Consensus       173 ~~~~~---~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (288)
T 1ob3_A          173 MGSKK---YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESF  249 (288)
T ss_dssp             TTCCS---CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGT
T ss_pred             eCCCC---CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHH
Confidence            76432   289999999999999999999999764311000                0        00000001111223


Q ss_pred             cCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        266 RDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       266 ~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ...+++++.+++.+||+.||.+|||+.+++++
T Consensus       250 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          250 LKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (288)
T ss_dssp             CCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            35688999999999999999999999999764

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.96  E-value=4.6e-30  Score=235.58  Aligned_cols=161  Identities=23%  Similarity=0.402  Sum_probs=113.9

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  |++  .||.|||++|+ +||||||+|||++.++.+||+|||+++.......  .......+++.|+|||
T Consensus       115 ~~~~~~~~~--qi~--~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE  187 (281)
T 1mp8_A          115 LASLILYAY--QLS--TALAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY--YKASKGKLPIKWMAPE  187 (281)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEEEETTEEEECC---------------------CCGGGCCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCe-ecccccHHHEEECCCCCEEECccccccccCcccc--cccccCCCcccccChh
Confidence            333444444  777  99999999999 9999999999999999999999999987643221  1122345678899999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      ++.+..+    +.++||||||+++|+|++ |..||.+............. .++   ..+..+++.+.+++.+||+.||.
T Consensus       188 ~~~~~~~----~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~-~~~---~~~~~~~~~l~~li~~~l~~~p~  259 (281)
T 1mp8_A          188 SINFRRF----TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-ERL---PMPPNCPPTLYSLMTKCWAYDPS  259 (281)
T ss_dssp             HHHHCCC----SHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-CCC---CCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             hcccCCC----CCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcC-CCC---CCCCCCCHHHHHHHHHHccCChh
Confidence            9987766    899999999999999996 99999865432221111111 111   12357889999999999999999


Q ss_pred             CCCChhHHHHHHHhhcc
Q psy16840        287 SRPDFPTIRARLKHMKD  303 (413)
Q Consensus       287 ~Rps~~~i~~~l~~~~~  303 (413)
                      +|||+.++++.|+.+..
T Consensus       260 ~Rps~~~l~~~l~~~~~  276 (281)
T 1mp8_A          260 RRPRFTELKAQLSTILE  276 (281)
T ss_dssp             GSCCHHHHHHHHHHHHH
T ss_pred             hCcCHHHHHHHHHHHHH
Confidence            99999999999887643

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.96  E-value=2.8e-30  Score=245.35  Aligned_cols=165  Identities=25%  Similarity=0.404  Sum_probs=127.3

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +....+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++....... ........||+.|+|
T Consensus       190 l~~~~~~~~~~--ql~--~aL~~LH~~~i-vH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~~t~~y~a  263 (359)
T 3vhe_A          190 LTLEHLICYSF--QVA--KGMEFLASRKC-IHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARLPLKWMA  263 (359)
T ss_dssp             BCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT-CEEC--CEECGGGCC
T ss_pred             cCHHHHHHHHH--HHH--HHHHHHHHCCc-ccCCCChhhEEEcCCCcEEEEeccceeeeccccc-chhccccCCCceeEC
Confidence            55555666666  888  99999999999 9999999999999999999999999976533221 122334567899999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++.+..+    +.++|||||||++|||++ |..||.+................+.   .+..+++++.+++.+||+.|
T Consensus       264 PE~~~~~~~----~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~d  336 (359)
T 3vhe_A          264 PETIFDRVY----TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGE  336 (359)
T ss_dssp             HHHHHHCCC----CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSS
T ss_pred             hhhhcCCCC----CchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHHccCC
Confidence            999988776    999999999999999998 9999977543221111111111111   23567899999999999999


Q ss_pred             CCCCCChhHHHHHHHhhcc
Q psy16840        285 PESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~~  303 (413)
                      |.+|||+.++++.|+.+..
T Consensus       337 P~~Rps~~ell~~L~~~~~  355 (359)
T 3vhe_A          337 PSQRPTFSELVEHLGNLLQ  355 (359)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhhCCCHHHHHHHHHHHHH
Confidence            9999999999999987754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=5.1e-30  Score=242.20  Aligned_cols=167  Identities=23%  Similarity=0.335  Sum_probs=127.2

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +.+..+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++........ ........||+.|+|
T Consensus       169 l~~~~~~~i~~--qi~--~aL~~LH~~~i-vH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~t~~y~a  242 (344)
T 1rjb_A          169 LTFEDLLCFAY--QVA--KGMEFLEFKSC-VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN-YVVRGNARLPVKWMA  242 (344)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTE-EETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT-SEEETTEEECGGGCC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHhCCc-ccCCCChhhEEEcCCCcEEeCCCccCcccccCcc-ceeccCccCccCccC
Confidence            34444555555  788  99999999999 9999999999999999999999999976543321 112234457889999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++.+..+    +.++||||||+++|+|++ |..||.+................+.   .+..+++.+.+++.+||+.|
T Consensus       243 PE~~~~~~~----~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~d  315 (344)
T 1rjb_A          243 PESLFEGIY----TIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMD---QPFYATEEIYIIMQSCWAFD  315 (344)
T ss_dssp             HHHHHHCCC----CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHhccCCC----ChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHcCCC
Confidence            999988766    999999999999999998 9999987543221111111122222   23567899999999999999


Q ss_pred             CCCCCChhHHHHHHHhhcccC
Q psy16840        285 PESRPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~~~~  305 (413)
                      |.+|||+.++++.|+.+....
T Consensus       316 p~~Rps~~~l~~~l~~~~~~~  336 (344)
T 1rjb_A          316 SRKRPSFPNLTSFLGCQLADA  336 (344)
T ss_dssp             GGGSCCHHHHHHHHHHHC---
T ss_pred             chhCcCHHHHHHHHHHHHHHH
Confidence            999999999999999886654

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.96  E-value=1.8e-30  Score=245.41  Aligned_cols=167  Identities=10%  Similarity=0.103  Sum_probs=122.9

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe--EEEEeccccccccccccCCC----cccccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW--VLQVTDFGLHELRHCAENDS----IGEHQYYRSL  201 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~--~~kl~Dfg~a~~~~~~~~~~----~~~~~~~gt~  201 (413)
                      ...+..++.  ||+  .||+|||++|+ +||||||+|||++.++  .+||+|||+++.........    .......||+
T Consensus       150 ~~~~~~i~~--qi~--~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~  224 (345)
T 2v62_A          150 KSTVLQLGI--RML--DVLEYIHENEY-VHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTI  224 (345)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCT
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCe-eCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCc
Confidence            333444444  777  99999999999 9999999999999887  99999999998764332111    1123457899


Q ss_pred             cccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC----CCCCCCCcccc--cCCChHHHHH
Q psy16840        202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC----EEPFRPNLELL--RDSCEPFVLA  275 (413)
Q Consensus       202 ~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~l~~  275 (413)
                      .|+|||++.+..+    +.++|||||||++|||++|..||.+...........    ...........  ...+++++.+
T Consensus       225 ~y~aPE~~~~~~~----~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  300 (345)
T 2v62_A          225 EFTSLDAHKGVAL----SRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQ  300 (345)
T ss_dssp             TTCCHHHHHTCCC----CHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHH
T ss_pred             cccCHHHhcCCCC----CchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHH
Confidence            9999999998766    999999999999999999999996422111000000    00000000000  1268889999


Q ss_pred             HHHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        276 CMRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       276 li~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      ++.+||+.||++|||+.++++.|+.+..
T Consensus       301 li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          301 FLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             HHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             HHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence            9999999999999999999999988653

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.96  E-value=8.6e-30  Score=239.78  Aligned_cols=165  Identities=20%  Similarity=0.244  Sum_probs=117.4

Q ss_pred             CCchHHhhHhhhcC---------CCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC-----CcccccccCccccc
Q psy16840        139 DGIPRQGMTFLHRS---------PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-----SIGEHQYYRSLLWK  204 (413)
Q Consensus       139 ~i~~a~gL~yLH~~---------~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-----~~~~~~~~gt~~y~  204 (413)
                      ||+  .||.|||+.         |+ +||||||+|||++.++.+||+|||+++........     ........||+.|+
T Consensus       119 qi~--~~L~~LH~~~~~~~~~~~~i-vH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~  195 (336)
T 3g2f_A          119 SVT--RGLAYLHTELPRGDHYKPAI-SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYM  195 (336)
T ss_dssp             HHH--HHHHHHHCCBCCGGGCBCCE-ECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGC
T ss_pred             HHH--HHHHHHHhhhccccccccce-eecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCcccee
Confidence            666  999999999         99 99999999999999999999999999865432211     11123457899999


Q ss_pred             CcccccCCCCC---CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC------------------CCCCCCCCcc
Q psy16840        205 APELLRDTHAP---IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED------------------CEEPFRPNLE  263 (413)
Q Consensus       205 aPE~~~~~~~~---~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~------------------~~~~~~~~~~  263 (413)
                      |||++.+....   ..++.++|||||||++|||++|..||............                  .....++..+
T Consensus       196 aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (336)
T 3g2f_A          196 APEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFP  275 (336)
T ss_dssp             CHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred             CchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCC
Confidence            99999873210   01267899999999999999997765433221111100                  0111122221


Q ss_pred             cc---cCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcccCc
Q psy16840        264 LL---RDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ  306 (413)
Q Consensus       264 ~~---~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~~~~  306 (413)
                      ..   ...+++.+.++|.+||+.||++|||+.++++.|+.+...-.
T Consensus       276 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~  321 (336)
T 3g2f_A          276 EAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE  321 (336)
T ss_dssp             TTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred             cccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence            11   12356789999999999999999999999999998875443

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.96  E-value=3e-30  Score=244.63  Aligned_cols=166  Identities=11%  Similarity=0.116  Sum_probs=122.8

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe--EEEEeccccccccccccCCC----cccccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW--VLQVTDFGLHELRHCAENDS----IGEHQYYRSLLWK  204 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~--~~kl~Dfg~a~~~~~~~~~~----~~~~~~~gt~~y~  204 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++  .+||+|||+++.........    .......||+.|+
T Consensus       161 ~~~i~~--qi~--~~L~~LH~~~i-vH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~  235 (352)
T 2jii_A          161 VLQVAC--RLL--DALEFLHENEY-VHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFI  235 (352)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-BCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTC
T ss_pred             HHHHHH--HHH--HHHHHHHhCCc-cCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCcccc
Confidence            334444  666  99999999999 9999999999999998  99999999998765432211    1123447899999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-CCCC--CCCCCCcc---cccCCChHHHHHHHH
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-EDCE--EPFRPNLE---LLRDSCEPFVLACMR  278 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-~~~~--~~~~~~~~---~~~~~~~~~l~~li~  278 (413)
                      |||++.+..+    +.++|||||||++|+|++|..||.+........ ....  ....+...   .....+++.+.+++.
T Consensus       236 aPE~~~~~~~----~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  311 (352)
T 2jii_A          236 SMDLHKGCGP----SRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLK  311 (352)
T ss_dssp             CHHHHTTCCC----CHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHH
T ss_pred             CHHHHccCCC----CchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHH
Confidence            9999988766    999999999999999999999997643111000 0000  00000000   001356899999999


Q ss_pred             HHhccCCCCCCChhHHHHHHHhhcccC
Q psy16840        279 DCWAEAPESRPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       279 ~cl~~~P~~Rps~~~i~~~l~~~~~~~  305 (413)
                      +||+.||.+|||+.++++.|+.+....
T Consensus       312 ~~l~~dp~~Rps~~~l~~~L~~~~~~~  338 (352)
T 2jii_A          312 VVMALTYEEKPPYAMLRNNLEALLQDL  338 (352)
T ss_dssp             HHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence            999999999999999999998876543

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=9.5e-30  Score=242.73  Aligned_cols=155  Identities=25%  Similarity=0.424  Sum_probs=111.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC-cccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++......... .......+|+.|+|||++.+..+   
T Consensus       200 qi~--~aL~~LH~~~i-vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~---  273 (373)
T 3c1x_A          200 QVA--KGMKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF---  273 (373)
T ss_dssp             HHH--HHHHHHHHTTC-CCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCC---
T ss_pred             HHH--HHHHHHHHCCE-ecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCC---
Confidence            666  99999999999 999999999999999999999999998654322111 11233456789999999988776   


Q ss_pred             CCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                       +.++|||||||++|||++ |.+||.+.+.......... ..++.   .+..+++.+.++|.+||+.||.+|||+.++++
T Consensus       274 -~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~-~~~~~---~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~  348 (373)
T 3c1x_A          274 -TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLL---QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  348 (373)
T ss_dssp             -CHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHT-TCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHc-CCCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence             999999999999999999 6778876543222111111 11111   23568899999999999999999999999999


Q ss_pred             HHHhhccc
Q psy16840        297 RLKHMKDG  304 (413)
Q Consensus       297 ~l~~~~~~  304 (413)
                      .|+.+...
T Consensus       349 ~L~~i~~~  356 (373)
T 3c1x_A          349 RISAIFST  356 (373)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHh
Confidence            99887654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.96  E-value=4e-30  Score=245.07  Aligned_cols=160  Identities=24%  Similarity=0.358  Sum_probs=122.1

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC---eEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..++.  ||+  .||+|||++|+ +||||||+|||++.+   ..+||+|||+++........ .......||+.|+||
T Consensus       182 ~~~~i~~--qi~--~aL~~LH~~~i-vHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~-~~~~~~~~t~~y~aP  255 (367)
T 3l9p_A          182 DLLHVAR--DIA--CGCQYLEENHF-IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY-RKGGCAMLPVKWMPP  255 (367)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSC-TTCCGGGSCGGGCCH
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCe-eCCCCChhhEEEecCCCCceEEECCCcccccccccccc-ccCCCcCCcccEECH
Confidence            3344444  777  99999999999 999999999999954   46999999999765432221 223345678999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |++.+..+    +.++|||||||++|||++ |..||.+.............. ++.   .+..+++.+.+++.+||+.||
T Consensus       256 E~~~~~~~----~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~-~~~---~~~~~~~~l~~li~~~l~~dP  327 (367)
T 3l9p_A          256 EAFMEGIF----TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMD---PPKNCPGPVYRIMTQCWQHQP  327 (367)
T ss_dssp             HHHHHCCC----CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-CCC---CCTTCCHHHHHHHHHHTCSSG
T ss_pred             HHhcCCCC----CcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCC---CCccCCHHHHHHHHHHcCCCH
Confidence            99988776    999999999999999998 999997654222111111111 111   235688999999999999999


Q ss_pred             CCCCChhHHHHHHHhhcc
Q psy16840        286 ESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~~  303 (413)
                      .+|||+.++++.|+.+..
T Consensus       328 ~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          328 EDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             GGSCCHHHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHHHHHhh
Confidence            999999999999987754

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.96  E-value=4.1e-30  Score=251.91  Aligned_cols=154  Identities=27%  Similarity=0.457  Sum_probs=121.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++++ +||||||+|||++.++.+||+|||+++........  ......+++.|+|||++....+    
T Consensus       292 qi~--~~l~~LH~~~i-vHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~----  362 (454)
T 1qcf_A          292 QIA--EGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVIEDNEYT--AREGAKFPIKWTAPEAINFGSF----  362 (454)
T ss_dssp             HHH--HHHHHHHHTTC-CCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH--TTCSSSSCGGGSCHHHHHHCCC----
T ss_pred             HHH--HHHHHHHhCCc-cCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee--ccCCCcccccccCHHHhccCCC----
Confidence            777  99999999999 99999999999999999999999999875432211  1223346788999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++|||++ |..||.+....+...... ...+..   .+..+++++.++|.+||+.||++|||+.+|+..
T Consensus       363 ~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~~~---~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~  438 (454)
T 1qcf_A          363 TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMP---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSV  438 (454)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-HTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCC---CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            999999999999999999 999998654222111111 111221   135789999999999999999999999999999


Q ss_pred             HHhhcccC
Q psy16840        298 LKHMKDGK  305 (413)
Q Consensus       298 l~~~~~~~  305 (413)
                      |+.+....
T Consensus       439 L~~~~~~~  446 (454)
T 1qcf_A          439 LDDFYTAT  446 (454)
T ss_dssp             HHTSSSSS
T ss_pred             HHHHHhcc
Confidence            99886543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.96  E-value=1.2e-29  Score=248.33  Aligned_cols=148  Identities=29%  Similarity=0.564  Sum_probs=118.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++++ +||||||+|||++.++.+||+|||+++.....      .....+++.|+|||++.+..+    
T Consensus       297 qi~--~~l~~LH~~~i-vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~------~~~~~~~~~y~aPE~~~~~~~----  363 (450)
T 1k9a_A          297 DVC--EAMEYLEGNNF-VHRDLAARNVLVSEDNVAKVSDFGLTKEASST------QDTGKLPVKWTAPEALREKKF----  363 (450)
T ss_dssp             HHH--HHHHHHHHTTE-ECSCCCGGGEEECTTSCEEECCCTTCEECC------------CCCTTTSCHHHHHSSCC----
T ss_pred             HHH--HHHHHHHhCCe-eCCCCCHhhEEECCCCCEEEeeCCCccccccc------ccCCCCCcceeCHHHhcCCCC----
Confidence            666  99999999999 99999999999999999999999998753211      122356789999999988776    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++|||++ |..||.+....+..... ....++.   .+..+++.+.++|.+||+.||.+|||+.++++.
T Consensus       364 ~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-~~~~~~~---~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~  439 (450)
T 1k9a_A          364 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-EKGYKMD---APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQ  439 (450)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHH-HTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCC---CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            999999999999999998 99999875533322211 1122222   236789999999999999999999999999999


Q ss_pred             HHhhcc
Q psy16840        298 LKHMKD  303 (413)
Q Consensus       298 l~~~~~  303 (413)
                      |+.+..
T Consensus       440 L~~i~~  445 (450)
T 1k9a_A          440 LEHIRT  445 (450)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            988754

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.96  E-value=3.9e-30  Score=245.60  Aligned_cols=161  Identities=21%  Similarity=0.381  Sum_probs=111.3

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++................+++.|+|||++.
T Consensus       149 ~~~i~~--qi~--~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  223 (373)
T 2qol_A          149 LVGMLR--GIA--SGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA  223 (373)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-eCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhc
Confidence            344444  777  99999999999 9999999999999999999999999987644322222222334577899999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++||||||+++||+++ |..||.+........... ...++.   .+..+++.+.+++.+||+.||.+||
T Consensus       224 ~~~~----~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~-~~~~~~---~~~~~~~~l~~li~~cl~~dp~~RP  295 (373)
T 2qol_A          224 YRKF----TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EGYRLP---PPMDCPAALYQLMLDCWQKDRNNRP  295 (373)
T ss_dssp             HCCC----CHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHH-TTEECC---CCTTCBHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCc----CchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCC---CCccccHHHHHHHHHHhCcChhhCc
Confidence            8776    999999999999999998 999997644221111111 111111   1246889999999999999999999


Q ss_pred             ChhHHHHHHHhhccc
Q psy16840        290 DFPTIRARLKHMKDG  304 (413)
Q Consensus       290 s~~~i~~~l~~~~~~  304 (413)
                      ++.++++.|+.+...
T Consensus       296 s~~~i~~~L~~~~~~  310 (373)
T 2qol_A          296 KFEQIVSILDKLIRN  310 (373)
T ss_dssp             CHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHhC
Confidence            999999999887543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.96  E-value=7.8e-30  Score=239.12  Aligned_cols=151  Identities=17%  Similarity=0.260  Sum_probs=118.8

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      ...++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++.......    .....+||+.|+|||++.
T Consensus       116 ~~~~~~--qi~--~al~~lH~~~i-vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~  186 (328)
T 3fe3_A          116 ARSKFR--QIV--SAVQYCHQKRI-VHRDLKAENLLLDADMNIKIADFGFSNEFTVGG----KLDAFCGAPPYAAPELFQ  186 (328)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC----GGGTTSSSGGGCCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHHCCE-eccCCCHHHEEEcCCCCEEEeeccCceecCCCC----ccccccCCcceeCccccc
Confidence            334444  788  99999999999 999999999999999999999999987653221    234567999999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +..+.   +.++|||||||++|+|++|..||.+.+.............     ..+..+++++.+++.+||..||.+|||
T Consensus       187 ~~~~~---~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~~li~~~L~~dP~~R~t  258 (328)
T 3fe3_A          187 GKKYD---GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-----RIPFYMSTDCENLLKRFLVLNPIKRGT  258 (328)
T ss_dssp             TCCCC---SHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----CCCTTSCHHHHHHHHHHCCSSTTTSCC
T ss_pred             CCCcC---CchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----CCCCCCCHHHHHHHHHHCCCChhHCcC
Confidence            87652   5899999999999999999999987542221111111111     123467899999999999999999999


Q ss_pred             hhHHHHHH
Q psy16840        291 FPTIRARL  298 (413)
Q Consensus       291 ~~~i~~~l  298 (413)
                      +.+++++.
T Consensus       259 ~~eil~h~  266 (328)
T 3fe3_A          259 LEQIMKDR  266 (328)
T ss_dssp             HHHHTTCT
T ss_pred             HHHHhcCH
Confidence            99998763

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.96  E-value=6e-30  Score=241.52  Aligned_cols=166  Identities=24%  Similarity=0.376  Sum_probs=125.8

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++........ .......+|+.|+|
T Consensus       171 l~~~~~~~i~~--qi~--~~l~~LH~~~i-vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~a  244 (343)
T 1luf_A          171 LSCAEQLCIAR--QVA--AGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-KADGNDAIPIRWMP  244 (343)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB-C----CCBCGGGCC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHhCCe-ecCCCCcceEEECCCCeEEEeecCCCcccccCccc-cccCCCcccceecC
Confidence            34444455555  777  99999999999 99999999999999999999999999765432211 12234467899999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++.+..+    +.++||||||+++|+|++ |..||.+.............. .+   ..+..+++.+.+++.+||+.|
T Consensus       245 PE~~~~~~~----~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~l~~li~~~l~~~  316 (343)
T 1luf_A          245 PESIFYNRY----TTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGN-IL---ACPENCPLELYNLMRLCWSKL  316 (343)
T ss_dssp             HHHHHHCCC----CHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC-CC---CCCTTCCHHHHHHHHHHTCSS
T ss_pred             hhhhccCCc----CcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCC-cC---CCCCCCCHHHHHHHHHHcccC
Confidence            999987776    999999999999999999 999997654222111111111 11   123578899999999999999


Q ss_pred             CCCCCChhHHHHHHHhhcccC
Q psy16840        285 PESRPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~~~~  305 (413)
                      |.+|||+.++++.|+.+....
T Consensus       317 p~~Rps~~~~~~~L~~~~~~~  337 (343)
T 1luf_A          317 PADRPSFCSIHRILQRMCERA  337 (343)
T ss_dssp             GGGSCCHHHHHHHHHHTTC--
T ss_pred             cccCCCHHHHHHHHHHHHhhh
Confidence            999999999999999887644

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.96  E-value=9.5e-30  Score=237.09  Aligned_cols=164  Identities=25%  Similarity=0.356  Sum_probs=125.8

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++........ ........+++.|+||
T Consensus       148 ~~~~~~~i~~--qi~--~~l~~lH~~~i-vH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aP  221 (314)
T 2ivs_A          148 TMGDLISFAW--QIS--QGMQYLAEMKL-VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS-YVKRSQGRIPVKWMAI  221 (314)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEEETTTEEEECCCTTCEECTTTSC-EECSSCCCSCGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCC-cccccchheEEEcCCCCEEEcccccccccccccc-ceeccCCCCcccccCh
Confidence            3344445555  777  99999999999 9999999999999999999999999876543221 1122334568899999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |++.+..+    +.++||||||+++|+|++ |..||.+.......... .....+   ..+..+++.+.+++.+||+.||
T Consensus       222 E~~~~~~~----~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~li~~~l~~dp  293 (314)
T 2ivs_A          222 ESLFDHIY----TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL-KTGHRM---ERPDNCSEEMYRLMLQCWKQEP  293 (314)
T ss_dssp             HHHHHCEE----CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-HTTCCC---CCCTTCCHHHHHHHHHHTCSSG
T ss_pred             hhhcCCCc----CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHh-hcCCcC---CCCccCCHHHHHHHHHHccCCh
Confidence            99988766    899999999999999999 99999765432211111 111111   1235788999999999999999


Q ss_pred             CCCCChhHHHHHHHhhccc
Q psy16840        286 ESRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~~~  304 (413)
                      .+|||+.++++.|+.+...
T Consensus       294 ~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          294 DKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             GGSCCHHHHHHHHHHHHHT
T ss_pred             hhCcCHHHHHHHHHHHHhh
Confidence            9999999999999887543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.96  E-value=4.5e-29  Score=239.12  Aligned_cols=149  Identities=18%  Similarity=0.277  Sum_probs=112.1

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      ...++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....   .......+||+.|+|||++.
T Consensus       155 ~~~~~~--qi~--~aL~~LH~~gi-vHrDLKp~NILl~~~g~ikL~DFGla~~~~~~---~~~~~~~~gt~~Y~aPE~l~  226 (396)
T 4dc2_A          155 ARFYSA--EIS--LALNYLHERGI-IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---GDTTSTFCGTPNYIAPEILR  226 (396)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCCTTCBCCCCT---TCCBCCCCBCGGGCCHHHHT
T ss_pred             HHHHHH--HHH--HHHHHHHHCCE-EeccCCHHHEEECCCCCEEEeecceeeecccC---CCccccccCCcccCCchhhc
Confidence            334444  788  99999999999 99999999999999999999999998753211   12234568999999999999


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC----CCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCE----EPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      +..+    +.++|||||||++|||++|..||..............    .........++..+++++.+||.+||+.||.
T Consensus       227 ~~~~----~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~  302 (396)
T 4dc2_A          227 GEDY----GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPK  302 (396)
T ss_dssp             TCCB----CTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTT
T ss_pred             CCCC----ChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCcCCHHHHHHHHHHhcCCHh
Confidence            8877    9999999999999999999999975432211110000    0000000123456889999999999999999


Q ss_pred             CCCCh
Q psy16840        287 SRPDF  291 (413)
Q Consensus       287 ~Rps~  291 (413)
                      +||++
T Consensus       303 ~R~~~  307 (396)
T 4dc2_A          303 ERLGC  307 (396)
T ss_dssp             TSTTC
T ss_pred             HcCCC
Confidence            99996

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.95  E-value=1.5e-29  Score=242.58  Aligned_cols=165  Identities=27%  Similarity=0.394  Sum_probs=126.6

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +....+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++........ .......+|+.|+|
T Consensus       188 l~~~~~~~i~~--qi~--~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~-~~~~~~~~t~~y~a  261 (382)
T 3tt0_A          188 LSSKDLVSCAY--QVA--RGMEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY-KKTTNGRLPVKWMA  261 (382)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTT-CCCTTCCCGGGGSC
T ss_pred             cCHHHHHHHHH--HHH--HHHHHHHhCCE-ecCCCCcceEEEcCCCcEEEcccCccccccccccc-ccccCCCCCcceeC
Confidence            34444445555  777  99999999999 99999999999999999999999999765432211 12234457889999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++.+..+    +.++|||||||++|+|++ |..||.+.......... ....++.   .+..+++++.+++.+||+.|
T Consensus       262 PE~~~~~~~----~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~l~~li~~~l~~d  333 (382)
T 3tt0_A          262 PEALFDRIY----THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-KEGHRMD---KPSNCTNELYMMMRDCWHAV  333 (382)
T ss_dssp             HHHHHSCCC----CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-HTTCCCC---CCSSCCHHHHHHHHHHTCSS
T ss_pred             HHHhcCCCC----CchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCC---CCccCCHHHHHHHHHHcCCC
Confidence            999988776    999999999999999999 99999765422211111 1111111   23568899999999999999


Q ss_pred             CCCCCChhHHHHHHHhhccc
Q psy16840        285 PESRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~~~  304 (413)
                      |.+|||+.++++.|+.+...
T Consensus       334 P~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          334 PSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             GGGSCCHHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHHH
Confidence            99999999999999887643

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.95  E-value=6e-29  Score=232.60  Aligned_cols=168  Identities=23%  Similarity=0.293  Sum_probs=125.6

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +.+..+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++....... ........||+.|+|
T Consensus       136 ~~~~~~~~i~~--~i~--~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~y~a  209 (321)
T 2qkw_B          136 MSWEQRLEICI--GAA--RGLHYLHTRAI-IHRDVKSINILLDENFVPKITDFGISKKGTELDQ-THLSTVVKGTLGYID  209 (321)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCCSTTEEECTTCCEEECCCTTCEECSSSSC-CCCBCCCEEETTTCC
T ss_pred             cCHHHHHHHHH--HHH--HHHHHhcCCCe-ecCCCCHHHEEECCCCCEEEeecccccccccccc-cccccccCCCccccC
Confidence            33444445555  777  99999999999 9999999999999999999999999876432221 111234468999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-----------CCCCCCCCCCc-ccccCCChHHH
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----------EDCEEPFRPNL-ELLRDSCEPFV  273 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-----------~~~~~~~~~~~-~~~~~~~~~~l  273 (413)
                      ||++.+..+    +.++||||||+++|+|++|+.||.+........           ........+.. ...+..++..+
T Consensus       210 PE~~~~~~~----~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (321)
T 2qkw_B          210 PEYFIKGRL----TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKF  285 (321)
T ss_dssp             HHHHHHCBC----CTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHH
T ss_pred             HHHhcCCCC----CcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHH
Confidence            999987766    899999999999999999999997654322211           00111111111 11224567889


Q ss_pred             HHHHHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        274 LACMRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       274 ~~li~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      .+++.+||+.||++|||+.++++.|+.+..
T Consensus       286 ~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          286 GDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            999999999999999999999999987754

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.95  E-value=1.1e-29  Score=236.50  Aligned_cols=166  Identities=22%  Similarity=0.343  Sum_probs=126.9

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++......... .......+|+.|+|
T Consensus       142 ~~~~~~~~~~~--qi~--~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~a  215 (313)
T 1t46_A          142 LDLEDLLSFSY--QVA--KGMAFLASKNC-IHRDLAARNILLTHGRITKICDFGLARDIKNDSNY-VVKGNARLPVKWMA  215 (313)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTS-EECSSSEECGGGCC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCe-ecCCCccceEEEcCCCCEEEccccccccccccccc-eeccCCCCcceeeC
Confidence            44445555555  777  99999999999 99999999999999999999999998765433211 12233456789999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++.+..+    +.++||||||+++|+|++ |..||.+...............++.   .+..+++.+.+++.+||+.|
T Consensus       216 PE~~~~~~~----~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~d  288 (313)
T 1t46_A          216 PESIFNCVY----TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML---SPEHAPAEMYDIMKTCWDAD  288 (313)
T ss_dssp             HHHHHHCCC----CHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCC---CCTTSCHHHHHHHHHHTCSS
T ss_pred             hHHhcCCCC----ChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCC---CcccCCHHHHHHHHHHcCCC
Confidence            999987766    999999999999999999 9999976542221111111111111   12567899999999999999


Q ss_pred             CCCCCChhHHHHHHHhhccc
Q psy16840        285 PESRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~~~  304 (413)
                      |.+|||+.++++.|+++...
T Consensus       289 p~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          289 PLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             GGGSCCHHHHHHHHHHHHHH
T ss_pred             chhCcCHHHHHHHHHHHHHH
Confidence            99999999999999887553

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.95  E-value=4.8e-29  Score=237.53  Aligned_cols=157  Identities=14%  Similarity=0.055  Sum_probs=118.7

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC-----------CeEEEEeccccccccccccCCCccccccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-----------RWVLQVTDFGLHELRHCAENDSIGEHQYY  198 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-----------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  198 (413)
                      .+..++.  ||+  .||+|||++|+ +||||||+|||++.           ++.+||+|||+|+...... ........+
T Consensus       173 ~~~~i~~--qi~--~~L~~lH~~~i-vHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-~~~~~~~~~  246 (365)
T 3e7e_A          173 LVISFAM--RML--YMIEQVHDCEI-IHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFP-KGTIFTAKC  246 (365)
T ss_dssp             HHHHHHH--HHH--HHHHHHHTTTE-ECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSC-TTEEECCSS
T ss_pred             HHHHHHH--HHH--HHHHHHhhCCe-ecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccC-CCceeeeec
Confidence            3344444  666  99999999999 99999999999998           8999999999997653221 122234567


Q ss_pred             CcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHH
Q psy16840        199 RSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMR  278 (413)
Q Consensus       199 gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (413)
                      ||+.|+|||++.+..+    +.++|||||||++|||++|+.||.........   .....+.      ...++.+.+++.
T Consensus       247 gt~~y~aPE~~~~~~~----~~~~DiwslG~il~elltg~~pf~~~~~~~~~---~~~~~~~------~~~~~~~~~~~~  313 (365)
T 3e7e_A          247 ETSGFQCVEMLSNKPW----NYQIDYFGVAATVYCMLFGTYMKVKNEGGECK---PEGLFRR------LPHLDMWNEFFH  313 (365)
T ss_dssp             CTTSCCCHHHHTTCCB----STHHHHHHHHHHHHHHHHSSCCCEEEETTEEE---ECSCCTT------CSSHHHHHHHHH
T ss_pred             CCCCCCChHHhcCCCC----CccccHHHHHHHHHHHHhCCCccccCCCCcee---echhccc------cCcHHHHHHHHH
Confidence            9999999999988876    99999999999999999999998643211111   0011111      124678999999


Q ss_pred             HHhccCCCCC-CChhHHHHHHHhhcccC
Q psy16840        279 DCWAEAPESR-PDFPTIRARLKHMKDGK  305 (413)
Q Consensus       279 ~cl~~~P~~R-ps~~~i~~~l~~~~~~~  305 (413)
                      .|++.+|.+| |++.++.+.|+.+....
T Consensus       314 ~~l~~~p~~r~~~~~~l~~~l~~~l~~~  341 (365)
T 3e7e_A          314 VMLNIPDCHHLPSLDLLRQKLKKVFQQH  341 (365)
T ss_dssp             HHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence            9999999999 67888888887765543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.95  E-value=3.6e-29  Score=237.45  Aligned_cols=158  Identities=17%  Similarity=0.214  Sum_probs=121.4

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe----EEEEeccccccccccccCCCcccccccCccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW----VLQVTDFGLHELRHCAENDSIGEHQYYRSLL  202 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~----~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~  202 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+|||++.++    .+||+|||++.......    .....+||+.
T Consensus       113 ~~~~~~~i~~--qi~--~aL~~LH~~gi-vHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~----~~~~~~gt~~  183 (361)
T 2yab_A          113 SEEEATSFIK--QIL--DGVNYLHTKKI-AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----EFKNIFGTPE  183 (361)
T ss_dssp             BHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC----CCCCCCSCGG
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCc-ccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC----ccccCCCCcc
Confidence            3334445555  888  99999999999 9999999999998776    79999999997654321    2234579999


Q ss_pred             ccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhc
Q psy16840        203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWA  282 (413)
Q Consensus       203 y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (413)
                      |+|||++.+..+    +.++|||||||++|+|++|..||.+.+.......+........ +.....+++.+.+||.+||.
T Consensus       184 y~aPE~~~~~~~----~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~L~  258 (361)
T 2yab_A          184 FVAPEIVNYEPL----GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD-EEFFSQTSELAKDFIRKLLV  258 (361)
T ss_dssp             GCCHHHHTTCCC----CTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC-HHHHTTSCHHHHHHHHHHSC
T ss_pred             EECchHHcCCCC----CccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC-chhccCCCHHHHHHHHHHCC
Confidence            999999988776    8999999999999999999999977542222111111111111 12335788999999999999


Q ss_pred             cCCCCCCChhHHHHHH
Q psy16840        283 EAPESRPDFPTIRARL  298 (413)
Q Consensus       283 ~~P~~Rps~~~i~~~l  298 (413)
                      .||.+|||+.+++++.
T Consensus       259 ~dP~~R~t~~e~l~hp  274 (361)
T 2yab_A          259 KETRKRLTIQEALRHP  274 (361)
T ss_dssp             SSTTTSCCHHHHHTST
T ss_pred             CChhHCcCHHHHhcCc
Confidence            9999999999998753

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.95  E-value=1.6e-29  Score=237.67  Aligned_cols=144  Identities=17%  Similarity=0.237  Sum_probs=114.8

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......   ......+||+.|+|||++.+..+    
T Consensus       113 qi~--~aL~~LH~~~i-vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  182 (337)
T 1o6l_A          113 EIV--SALEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKTFCGTPEYLAPEVLEDNDY----  182 (337)
T ss_dssp             HHH--HHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT---CCBCCCEECGGGCCGGGGSSSCB----
T ss_pred             HHH--HHHHHHHHCCe-ecCcCCHHHEEECCCCCEEEeeccchhhcccCC---CcccccccChhhCChhhhcCCCC----
Confidence            777  99999999999 999999999999999999999999987532211   12345679999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----ChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~  293 (413)
                      +.++|||||||++|||++|..||.+.+.......+.....     .++..+++++.++|.+||+.||.+||     ++.+
T Consensus       183 ~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~e  257 (337)
T 1o6l_A          183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKE  257 (337)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHH
T ss_pred             CchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-----CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHH
Confidence            8999999999999999999999976442211111111111     12356889999999999999999999     8888


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++++
T Consensus       258 i~~h  261 (337)
T 1o6l_A          258 VMEH  261 (337)
T ss_dssp             HHTS
T ss_pred             HHcC
Confidence            8765

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=9e-30  Score=234.36  Aligned_cols=163  Identities=23%  Similarity=0.372  Sum_probs=125.4

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  ||+  .||.|||++|+ +||||||+||+++.++.+||+|||++.................+|+.|+|||
T Consensus       109 ~~~~~~~~~--qi~--~~l~~lH~~~i-~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  183 (287)
T 1u59_A          109 VSNVAELLH--QVS--MGMKYLEEKNF-VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE  183 (287)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCE-eeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHH
Confidence            333444555  777  99999999999 9999999999999999999999999987643322222223345688999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      ++.+..+    +.++||||||+++|+|++ |..||.+........... ...++   ..+..+++.+.++|.+||+.||.
T Consensus       184 ~~~~~~~----~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~-~~~~~---~~~~~~~~~l~~li~~~l~~~p~  255 (287)
T 1u59_A          184 CINFRKF----SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRM---ECPPECPPELYALMSDCWIYKWE  255 (287)
T ss_dssp             HHHHCEE----CHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH-TTCCC---CCCTTCCHHHHHHHHHTTCSSGG
T ss_pred             HhccCCC----CchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHh-cCCcC---CCCCCcCHHHHHHHHHHcCCChh
Confidence            9987766    899999999999999998 999997654222111111 11111   12357899999999999999999


Q ss_pred             CCCChhHHHHHHHhhcc
Q psy16840        287 SRPDFPTIRARLKHMKD  303 (413)
Q Consensus       287 ~Rps~~~i~~~l~~~~~  303 (413)
                      +||++.++++.|+.+..
T Consensus       256 ~Rps~~~l~~~l~~~~~  272 (287)
T 1u59_A          256 DRPDFLTVEQRMRACYY  272 (287)
T ss_dssp             GSCCHHHHHHHHHHHHH
T ss_pred             hCcCHHHHHHHHHHHHH
Confidence            99999999999988754

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.95  E-value=4.9e-30  Score=237.01  Aligned_cols=163  Identities=21%  Similarity=0.354  Sum_probs=118.5

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  |++  .||.|||++|+ +||||||+|||++.++.+||+|||++.................++..|+|||++
T Consensus       115 ~~~~~~~--qi~--~~l~~lH~~~i-vH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  189 (295)
T 3ugc_A          115 KLLQYTS--QIC--KGMEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL  189 (295)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHhcCCc-ccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHh
Confidence            3344444  777  99999999999 999999999999999999999999998764433222223344577889999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCC-------CCCC--------CCCCCCCCCCcccccCCChHHHH
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLY-------EPKG--------EDCEEPFRPNLELLRDSCEPFVL  274 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~-------~~~~--------~~~~~~~~~~~~~~~~~~~~~l~  274 (413)
                      .+..+    +.++||||||+++|+|++|..||......       ....        .......++   ..+..+++++.
T Consensus       190 ~~~~~----~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~  262 (295)
T 3ugc_A          190 TESKF----SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL---PRPDGCPDEIY  262 (295)
T ss_dssp             HHCCC----CHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCC---CCCTTCCHHHH
T ss_pred             cCCCC----ChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcC---CCCcCcCHHHH
Confidence            88776    99999999999999999999998642100       0000        000001111   12357889999


Q ss_pred             HHHHHHhccCCCCCCChhHHHHHHHhhccc
Q psy16840        275 ACMRDCWAEAPESRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       275 ~li~~cl~~~P~~Rps~~~i~~~l~~~~~~  304 (413)
                      +++.+||+.||.+|||+.++++.|+.+...
T Consensus       263 ~li~~~l~~dp~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          263 MIMTECWNNNVNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            999999999999999999999999887543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.7e-29  Score=237.63  Aligned_cols=163  Identities=22%  Similarity=0.385  Sum_probs=117.5

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++................+|+.|+|||+
T Consensus       147 ~~~~~i~~--qi~--~aL~~LH~~~i-vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  221 (333)
T 1mqb_A          147 LQLVGMLR--GIA--AGMKYLANMNY-VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA  221 (333)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHH
T ss_pred             HHHHHHHH--HHH--HHHHHHHhCCe-eCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchh
Confidence            33444444  777  99999999999 99999999999999999999999999876443222222233456788999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      +.+..+    +.++||||||+++|+|++ |..||.+........... ...++.   .+..+++.+.+++.+||+.||.+
T Consensus       222 ~~~~~~----~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~-~~~~~~---~~~~~~~~l~~li~~~l~~~p~~  293 (333)
T 1mqb_A          222 ISYRKF----TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN-DGFRLP---TPMDCPSAIYQLMMQCWQQERAR  293 (333)
T ss_dssp             HHSCCC----CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCC---CCTTCBHHHHHHHHHHTCSSTTT
T ss_pred             cccCCC----CchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH-CCCcCC---CcccCCHHHHHHHHHHcCCChhh
Confidence            988776    899999999999999998 999997644221111111 111111   12568899999999999999999


Q ss_pred             CCChhHHHHHHHhhccc
Q psy16840        288 RPDFPTIRARLKHMKDG  304 (413)
Q Consensus       288 Rps~~~i~~~l~~~~~~  304 (413)
                      ||++.++++.|+.+...
T Consensus       294 Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          294 RPKFADIVSILDKLIRA  310 (333)
T ss_dssp             SCCHHHHHHHHHHHHHS
T ss_pred             CcCHHHHHHHHHHHHhc
Confidence            99999999999887543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.95  E-value=1e-28  Score=229.64  Aligned_cols=158  Identities=22%  Similarity=0.266  Sum_probs=120.6

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......    ......||+.|+||
T Consensus       118 ~~~~~~~i~~--qi~--~al~~lH~~~i-vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aP  188 (308)
T 3g33_A          118 PAETIKDLMR--QFL--RGLDFLHANCI-VHRDLKPENILVTSGGTVKLADFGLARIYSYQM----ALTPVVVTLWYRAP  188 (308)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCTTTEEECTTSCEEECSCSCTTTSTTCC----CSGGGGCCCSSCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCc-ccCCCCHHHEEEcCCCCEEEeeCccccccCCCc----ccCCccccccccCc
Confidence            3444455555  788  99999999999 999999999999999999999999987653221    23445789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---------------C-------CCCCCCCCCccc
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------------E-------DCEEPFRPNLEL  264 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---------------~-------~~~~~~~~~~~~  264 (413)
                      |++.+..+    +.++|||||||++|+|++|..||.+.+......               .       ............
T Consensus       189 E~~~~~~~----~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (308)
T 3g33_A          189 EVLLQSTY----ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQS  264 (308)
T ss_dssp             HHHHTSCC----CSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHH
T ss_pred             hHHcCCCC----CchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHH
Confidence            99988776    899999999999999999999997644111000               0       000011111222


Q ss_pred             ccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        265 LRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ..+.+++.+.+||.+||+.||.+|||+.+++++
T Consensus       265 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          265 VVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             HSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence            335688999999999999999999999999865

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.95  E-value=6.3e-30  Score=238.89  Aligned_cols=157  Identities=20%  Similarity=0.291  Sum_probs=115.5

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++.......   ......||+.|+|||++
T Consensus       109 ~~~~~~~--qi~--~aL~~lH~~~i-vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~t~~y~aPE~~  180 (317)
T 2pmi_A          109 LVKYFQW--QLL--QGLAFCHENKI-LHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN---TFSSEVVTLWYRAPDVL  180 (317)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC---CCCCCCSCCTTCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCe-eeCCCChHHeEEcCCCCEEECcCccceecCCCcc---cCCCCcccccccCchHh
Confidence            3344444  777  99999999999 9999999999999999999999999876532211   12345789999999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC------------------------CCCCCCCCCC----
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG------------------------EDCEEPFRPN----  261 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~------------------------~~~~~~~~~~----  261 (413)
                      .+...   ++.++|||||||++|+|++|..||.+.+......                        ..........    
T Consensus       181 ~~~~~---~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (317)
T 2pmi_A          181 MGSRT---YSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQV  257 (317)
T ss_dssp             TTCCC---CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHH
T ss_pred             hCCCC---CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHh
Confidence            76432   2899999999999999999999997643111000                        0000000000    


Q ss_pred             -cccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        262 -LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       262 -~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                       .+.....+++++.+++.+||+.||.+|||+.++++.
T Consensus       258 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          258 LQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             HGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             hcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence             011123578899999999999999999999999865

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.95  E-value=1.5e-29  Score=236.90  Aligned_cols=161  Identities=19%  Similarity=0.267  Sum_probs=120.8

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +....+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++........ ........||+.|+|
T Consensus       102 ~~~~~~~~i~~--qi~--~aL~~LH~~gi-vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~gt~~y~a  175 (323)
T 3tki_A          102 MPEPDAQRFFH--QLM--AGVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVA  175 (323)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCCTTCEECEETTE-ECCBCSCCSCGGGSC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCc-cccccchHHEEEeCCCCEEEEEeeccceeccCCc-ccccCCCccCcCccC
Confidence            33444455555  888  99999999999 9999999999999999999999999976532221 111234578999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC--CCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE--DCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      ||++.+..+.   +.++|||||||++|+|++|..||.+.........  .......+.    ...+++.+.+|+.+||..
T Consensus       176 PE~~~~~~~~---~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~L~~  248 (323)
T 3tki_A          176 PELLKRREFH---AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----WKKIDSAPLALLHKILVE  248 (323)
T ss_dssp             HHHHHCSSBC---HHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTT----GGGSCHHHHHHHHHHSCS
T ss_pred             cHHhccCCCC---CCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCc----cccCCHHHHHHHHHHccC
Confidence            9999876542   6789999999999999999999976442211110  000111111    245788999999999999


Q ss_pred             CCCCCCChhHHHHHHH
Q psy16840        284 APESRPDFPTIRARLK  299 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l~  299 (413)
                      ||.+|||+.++++...
T Consensus       249 dP~~R~t~~eil~h~~  264 (323)
T 3tki_A          249 NPSARITIPDIKKDRW  264 (323)
T ss_dssp             STTTSCCHHHHTTCTT
T ss_pred             ChhhCcCHHHHhhChh
Confidence            9999999999987643

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=1e-29  Score=231.69  Aligned_cols=158  Identities=24%  Similarity=0.459  Sum_probs=122.2

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||+|||++|+ +||||||+||+++.++.+||+|||++.........  ......+|+.|+|||++.
T Consensus       108 ~~~i~~--~i~--~~l~~lH~~~i-~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~  180 (269)
T 4hcu_A          108 LLGMCL--DVC--EGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT--SSTGTKFPVKWASPEVFS  180 (269)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH--STTSTTCCGGGCCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHhCCe-ecCCcchheEEEcCCCCEEeccccccccccccccc--cccCcccccccCCHHHhc
Confidence            334444  777  99999999999 99999999999999999999999999765432211  123345678899999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++||||||+++|+|++ |..||.+............ ..++.   .+..+++.+.+++.+||+.||.+||
T Consensus       181 ~~~~----~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp  252 (269)
T 4hcu_A          181 FSRY----SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLY---KPRLASTHVYQIMNHCWRERPEDRP  252 (269)
T ss_dssp             HCCC----CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-TCCCC---CCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             CCCC----CchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhc-CccCC---CCCcCCHHHHHHHHHHccCCcccCc
Confidence            7776    999999999999999999 9999976542221111111 11111   1245788999999999999999999


Q ss_pred             ChhHHHHHHHhhcc
Q psy16840        290 DFPTIRARLKHMKD  303 (413)
Q Consensus       290 s~~~i~~~l~~~~~  303 (413)
                      |+.++++.|+.+..
T Consensus       253 s~~~ll~~l~~l~~  266 (269)
T 4hcu_A          253 AFSRLLRQLAEIAE  266 (269)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH
Confidence            99999999988754

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.95  E-value=1.7e-29  Score=255.85  Aligned_cols=162  Identities=24%  Similarity=0.391  Sum_probs=120.5

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..+..++.  ||+  .||+|||++++ +||||||+|||++.++.+||+|||+++................+++.|+|||
T Consensus       435 ~~~~~~i~~--qi~--~~L~~LH~~~i-iHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE  509 (613)
T 2ozo_A          435 VSNVAELLH--QVS--MGMKYLEEKNF-VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE  509 (613)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCE-EcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHh
Confidence            333444445  777  99999999999 9999999999999999999999999987643322222222334568899999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      ++.+..+    +.++|||||||++|||++ |..||.+....+....+. ...++.   .+..+++++.++|.+||+.||+
T Consensus       510 ~~~~~~~----~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-~~~~~~---~p~~~~~~l~~li~~cl~~dP~  581 (613)
T 2ozo_A          510 CINFRKF----SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRME---CPPECPPELYALMSDCWIYKWE  581 (613)
T ss_dssp             HHHHCCC----CHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH-TTCCCC---CCTTCCHHHHHHHHHTTCSSTT
T ss_pred             hhcCCCC----CcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-cCCCCC---CCCcCCHHHHHHHHHHcCCChh
Confidence            9987776    999999999999999998 999998754322211111 111222   2357899999999999999999


Q ss_pred             CCCChhHHHHHHHhhc
Q psy16840        287 SRPDFPTIRARLKHMK  302 (413)
Q Consensus       287 ~Rps~~~i~~~l~~~~  302 (413)
                      +||++.++++.|+.+.
T Consensus       582 ~RPs~~~l~~~L~~~~  597 (613)
T 2ozo_A          582 DRPDFLTVEQRMRACY  597 (613)
T ss_dssp             TSCCHHHHHHHHHHHH
T ss_pred             HCcCHHHHHHHHHHHH
Confidence            9999999999988764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.1e-28  Score=232.31  Aligned_cols=170  Identities=25%  Similarity=0.403  Sum_probs=118.9

Q ss_pred             HhhhccccCCchHHhhHhhhcC--------CCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC-CcccccccCcc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRS--------PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSL  201 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~--------~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~  201 (413)
                      +..++.  |++  .||.|||++        |+ +||||||+|||++.++.+||+|||++......... ........||+
T Consensus       136 ~~~i~~--~i~--~~l~~lH~~~~~~~~~~~i-vH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~  210 (337)
T 3mdy_A          136 MLKLAY--SSV--SGLCHLHTEIFSTQGKPAI-AHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTK  210 (337)
T ss_dssp             HHHHHH--HHH--HHHHHHHSCBCSTTCBCCE-ECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCG
T ss_pred             HHHHHH--HHH--HHHHHHHHhhhhhccCCCE-EecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCc
Confidence            334444  677  999999998        98 99999999999999999999999999765433221 11123457899


Q ss_pred             cccCcccccCCCCCCC--CCccchhHHHHHHHHHHHhC----------CCCCCCCCCCCCCC-----CCCCCCCCCCccc
Q psy16840        202 LWKAPELLRDTHAPIR--GTQKADVYAFAVILHEIIGR----------RGPFGGCGLYEPKG-----EDCEEPFRPNLEL  264 (413)
Q Consensus       202 ~y~aPE~~~~~~~~~~--~~~~~Dv~slG~il~el~~g----------~~pf~~~~~~~~~~-----~~~~~~~~~~~~~  264 (413)
                      .|+|||++.+......  ++.++|||||||++|||++|          ..||..........     .......++..+.
T Consensus       211 ~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (337)
T 3mdy_A          211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPN  290 (337)
T ss_dssp             GGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG
T ss_pred             ceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccc
Confidence            9999999987765110  01249999999999999999          55554332111110     0111112222211


Q ss_pred             --ccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcccC
Q psy16840        265 --LRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       265 --~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~~~  305 (413)
                        ....+++++.+++.+||+.||.+|||+.++++.|+.+....
T Consensus       291 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          291 RWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             cchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence              12357888999999999999999999999999999887654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.95  E-value=3.1e-29  Score=230.69  Aligned_cols=159  Identities=30%  Similarity=0.491  Sum_probs=120.0

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCC--CcccCCCCCCCeEEcCCeE-----EEEeccccccccccccCCCcccccccC
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSP--IGCHGNLKSSNCVVTSRWV-----LQVTDFGLHELRHCAENDSIGEHQYYR  199 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~--iiiHrdlkp~Nill~~~~~-----~kl~Dfg~a~~~~~~~~~~~~~~~~~g  199 (413)
                      .+..+..++.  |++  .||+|||++|  + +||||||+|||++.++.     +||+|||+++....      ......|
T Consensus       120 ~~~~~~~~~~--~l~--~~l~~lH~~~~~i-vH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~------~~~~~~g  188 (287)
T 4f0f_A          120 KWSVKLRLML--DIA--LGIEYMQNQNPPI-VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH------SVSGLLG  188 (287)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHTSSSCC-BCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS------CEECCCC
T ss_pred             cHHHHHHHHH--HHH--HHHHHHHhCCCCe-ecCCCCcceEEEeccCCCCceeEEeCCCCccccccc------cccccCC
Confidence            3444445555  777  9999999999  8 99999999999987765     99999999864322      1334578


Q ss_pred             cccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC--CCCCCCCCCCCcccccCCChHHHHHHH
Q psy16840        200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK--GEDCEEPFRPNLELLRDSCEPFVLACM  277 (413)
Q Consensus       200 t~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (413)
                      |+.|+|||++.+...  .++.++|||||||++|+|++|..||.........  ........++.   .+..+++.+.+++
T Consensus       189 ~~~y~aPE~~~~~~~--~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li  263 (287)
T 4f0f_A          189 NFQWMAPETIGAEEE--SYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT---IPEDCPPRLRNVI  263 (287)
T ss_dssp             CCTTSCGGGSSCSSC--EECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC---CCTTSCHHHHHHH
T ss_pred             CccccCchhhccCCC--CcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC---CCcccCHHHHHHH
Confidence            999999999854322  2288999999999999999999999764422210  00111112222   2367889999999


Q ss_pred             HHHhccCCCCCCChhHHHHHHHhh
Q psy16840        278 RDCWAEAPESRPDFPTIRARLKHM  301 (413)
Q Consensus       278 ~~cl~~~P~~Rps~~~i~~~l~~~  301 (413)
                      .+||+.||.+|||+.++++.|+++
T Consensus       264 ~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          264 ELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             HHHhcCChhhCcCHHHHHHHHHhC
Confidence            999999999999999999998763

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.95  E-value=1e-29  Score=245.95  Aligned_cols=135  Identities=15%  Similarity=-0.005  Sum_probs=109.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc--------
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR--------  210 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------  210 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....      ....+| +.|+|||++.        
T Consensus       219 qi~--~aL~~LH~~~i-iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~------~~~~~g-~~y~aPE~~~~~~~~~~~  288 (413)
T 3dzo_A          219 QVI--RLLASLHHYGL-VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS------AVSPIG-RGFAPPETTAERMLPFGQ  288 (413)
T ss_dssp             HHH--HHHHHHHHTTE-ECSCCCGGGEEECTTCCEEECCGGGCEETTEE------ECCCCC-TTTCCHHHHHHHTSTTGG
T ss_pred             HHH--HHHHHHHhCCc-ccCCcccceEEEecCCeEEEEeccceeecCCc------cccCCC-CceeCchhhhcccccccc
Confidence            666  99999999999 99999999999999999999999998764322      234467 9999999993        


Q ss_pred             --CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        211 --DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       211 --~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                        +..+    +.++|||||||++|||++|+.||.+............         ....+++.+.+||.+||+.||.+|
T Consensus       289 ~~~~~~----~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~dP~~R  355 (413)
T 3dzo_A          289 HHPTLM----TFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFR---------SCKNIPQPVRALLEGFLRYPKEDR  355 (413)
T ss_dssp             GCCEEE----CHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGS---------SCCCCCHHHHHHHHHHTCSSGGGS
T ss_pred             ccCcCC----CchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHh---------hcccCCHHHHHHHHHHccCChhhC
Confidence              3334    8899999999999999999999976543222221111         113578899999999999999999


Q ss_pred             CChhHHHH
Q psy16840        289 PDFPTIRA  296 (413)
Q Consensus       289 ps~~~i~~  296 (413)
                      |++.++++
T Consensus       356 pt~~~~l~  363 (413)
T 3dzo_A          356 LLPLQAME  363 (413)
T ss_dssp             CCHHHHTT
T ss_pred             cCHHHHHh
Confidence            99998865

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.95  E-value=7.6e-30  Score=237.95  Aligned_cols=164  Identities=26%  Similarity=0.410  Sum_probs=125.0

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++....... ........||+.|+||
T Consensus       146 ~~~~~~~~~~--qi~--~al~~lH~~~i-~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~t~~y~aP  219 (316)
T 2xir_A          146 TLEHLICYSF--QVA--KGMEFLASRKC-IHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARLPLKWMAP  219 (316)
T ss_dssp             EHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTT-SEEETTEEECGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCc-ccccCccceEEECCCCCEEECCCccccccccCcc-ceeccCCCcceeecCc
Confidence            3344445555  777  99999999999 9999999999999999999999999876543221 1222344678899999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |++.+..+    +.++||||||+++|+|++ |..||.+................+.   .+..+++.+.+++.+||+.||
T Consensus       220 E~~~~~~~----~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp  292 (316)
T 2xir_A          220 ETIFDRVY----TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEP  292 (316)
T ss_dssp             HHHHHCCC----CHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSG
T ss_pred             hhhccccc----cchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCC---CCCCCCHHHHHHHHHHcCCCh
Confidence            99988776    899999999999999998 9999976542221111111111111   235678899999999999999


Q ss_pred             CCCCChhHHHHHHHhhcc
Q psy16840        286 ESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~~  303 (413)
                      .+|||+.++++.|+.+..
T Consensus       293 ~~Rps~~ell~~L~~~~~  310 (316)
T 2xir_A          293 SQRPTFSELVEHLGNLLQ  310 (316)
T ss_dssp             GGSCCHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHh
Confidence            999999999999988754

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.95  E-value=9.6e-29  Score=230.20  Aligned_cols=159  Identities=16%  Similarity=0.183  Sum_probs=118.0

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||
T Consensus       118 ~~~~~~~~~--qi~--~~l~~LH~~~i-vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~t~~y~aPE  189 (311)
T 3niz_A          118 DSQIKIYLY--QLL--RGVAHCHQHRI-LHRDLKPQNLLINSDGALKLADFGLARAFGIPV---RSYTHEVVTLWYRAPD  189 (311)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEETTSCC---C---CCCCCCTTCCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCc-ccCCCchHhEEECCCCCEEEccCcCceecCCCc---ccccCCcccCCcCCHH
Confidence            333444555  788  99999999999 999999999999999999999999997653221   1123456899999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-------------------------CCCCCCCCc
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED-------------------------CEEPFRPNL  262 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~-------------------------~~~~~~~~~  262 (413)
                      ++.+...   ++.++|||||||++|+|++|..||.+..........                         .........
T Consensus       190 ~~~~~~~---~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (311)
T 3niz_A          190 VLMGSKK---YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPW  266 (311)
T ss_dssp             HHTTCCS---CCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCH
T ss_pred             HhcCCCC---CCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcH
Confidence            9876432   289999999999999999999999765432211100                         000011112


Q ss_pred             ccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ....+.+++++.+||.+||+.||.+|||+.+++++
T Consensus       267 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          267 SSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH  301 (311)
T ss_dssp             HHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            22335678899999999999999999999999874

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.95  E-value=1.3e-29  Score=257.43  Aligned_cols=159  Identities=25%  Similarity=0.403  Sum_probs=119.7

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++................+|+.|+|||++.
T Consensus       471 ~~~i~~--qi~--~~L~yLH~~~i-iHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~  545 (635)
T 4fl3_A          471 IIELVH--QVS--MGMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN  545 (635)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHHCCE-eCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhc
Confidence            344444  777  99999999999 9999999999999999999999999987654332222233345678999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++|||||||++|||++ |..||.+........... ...++.   .+..+++++.++|.+||+.||++||
T Consensus       546 ~~~~----~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-~~~~~~---~p~~~~~~l~~li~~cl~~dP~~RP  617 (635)
T 4fl3_A          546 YYKF----SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-KGERMG---CPAGCPREMYDLMNLCWTYDVENRP  617 (635)
T ss_dssp             HCCC----CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCC---CCTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred             CCCC----CcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCC---CCCCCCHHHHHHHHHHcCCCHhHCc
Confidence            8776    999999999999999998 999998754322111111 111121   2357899999999999999999999


Q ss_pred             ChhHHHHHHHhhc
Q psy16840        290 DFPTIRARLKHMK  302 (413)
Q Consensus       290 s~~~i~~~l~~~~  302 (413)
                      ++.++++.|+.+.
T Consensus       618 s~~~l~~~L~~~~  630 (635)
T 4fl3_A          618 GFAAVELRLRNYY  630 (635)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHH
Confidence            9999999998764

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.95  E-value=1.1e-29  Score=239.83  Aligned_cols=161  Identities=18%  Similarity=0.247  Sum_probs=112.1

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||.|||++|+ +||||||+|||++ ++.+||+|||+++....... ........||+.|+|||++
T Consensus       109 ~~~~i~~--qi~--~al~~lH~~~i-iHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~  181 (343)
T 3dbq_A          109 ERKSYWK--NML--EAVHTIHQHGI-VHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-SVVKDSQVGTVNYMPPEAI  181 (343)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEEE-TTEEEECCCSSSCCC-------------CCCCSSCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCe-ecCCCCcceEEEE-CCcEEEeecccccccCcccc-cccCCCCcCCcCcCCHHHH
Confidence            3444555  788  99999999999 9999999999998 56899999999976543221 1123345789999999998


Q ss_pred             cCCCC-------CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC-CCCCCCCCCCCcccccCCChHHHHHHHHHHh
Q psy16840        210 RDTHA-------PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK-GEDCEEPFRPNLELLRDSCEPFVLACMRDCW  281 (413)
Q Consensus       210 ~~~~~-------~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (413)
                      .+...       ...++.++|||||||++|+|++|..||.+....... .........   ...+...++.+.+++.+||
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~L  258 (343)
T 3dbq_A          182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE---IEFPDIPEKDLQDVLKCCL  258 (343)
T ss_dssp             HHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSC---CCCCCCSCHHHHHHHHHHT
T ss_pred             hhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcc---cCCcccCCHHHHHHHHHHc
Confidence            65110       012389999999999999999999999753211000 000001111   1123456789999999999


Q ss_pred             ccCCCCCCChhHHHHHHHh
Q psy16840        282 AEAPESRPDFPTIRARLKH  300 (413)
Q Consensus       282 ~~~P~~Rps~~~i~~~l~~  300 (413)
                      +.||.+|||+.+++++..-
T Consensus       259 ~~dp~~Rpt~~e~l~hp~~  277 (343)
T 3dbq_A          259 KRDPKQRISIPELLAHPYV  277 (343)
T ss_dssp             CSSTTTSCCHHHHHTSHHH
T ss_pred             CCChhHCCCHHHHHhCccc
Confidence            9999999999999887553

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=4.4e-29  Score=230.82  Aligned_cols=161  Identities=22%  Similarity=0.419  Sum_probs=120.9

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccC-CCcccccccCcccccCcccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN-DSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~~gt~~y~aPE~~  209 (413)
                      +..++.  |++  .||+|||++|+ +||||||+|||++.++.+||+|||+++....... .........+++.|+|||.+
T Consensus       126 ~~~i~~--qi~--~~l~~LH~~~i-~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  200 (298)
T 3pls_A          126 LISFGL--QVA--RGMEYLAEQKF-VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL  200 (298)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHhCCc-ccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhh
Confidence            334444  777  99999999999 9999999999999999999999999976543321 11223345678999999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGP-FGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      .+..+    +.++||||||+++|+|++|..| |............. ....+.   .+..+++.+.+++.+||+.||.+|
T Consensus       201 ~~~~~----~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~l~~li~~~l~~~p~~R  272 (298)
T 3pls_A          201 QTYRF----TTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-QGRRLP---QPEYCPDSLYQVMQQCWEADPAVR  272 (298)
T ss_dssp             TTCCC----CHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH-TTCCCC---CCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             ccCCC----ChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh-cCCCCC---CCccchHHHHHHHHHHccCChhhC
Confidence            88776    8999999999999999996555 44332211111111 111111   235678899999999999999999


Q ss_pred             CChhHHHHHHHhhccc
Q psy16840        289 PDFPTIRARLKHMKDG  304 (413)
Q Consensus       289 ps~~~i~~~l~~~~~~  304 (413)
                      ||+.++++.|+.+...
T Consensus       273 ps~~~ll~~l~~~~~~  288 (298)
T 3pls_A          273 PTFRVLVGEVEQIVSA  288 (298)
T ss_dssp             CCHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHH
Confidence            9999999999887553

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.95  E-value=1.6e-29  Score=248.37  Aligned_cols=169  Identities=13%  Similarity=0.212  Sum_probs=128.3

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEE---cCCeEEEEeccccccccccccCCC----cccccccC
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVV---TSRWVLQVTDFGLHELRHCAENDS----IGEHQYYR  199 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill---~~~~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~g  199 (413)
                      .+..+..++.  ||+  .||.|||++|+ +||||||+|||+   +.++.+||+|||+++.........    .......|
T Consensus       101 ~~~~~~~i~~--qi~--~aL~yLH~~gI-vHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~g  175 (483)
T 3sv0_A          101 SLKTVLMLAD--QMI--NRVEFVHSKSF-LHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTG  175 (483)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCS
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCE-eecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCC
Confidence            3333444455  777  99999999999 999999999999   578999999999998765432211    11235678


Q ss_pred             cccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCCCCCCcccccCCChHHHHHH
Q psy16840        200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---EDCEEPFRPNLELLRDSCEPFVLAC  276 (413)
Q Consensus       200 t~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~l  276 (413)
                      |+.|+|||++.+..+    +.++|||||||++|||++|..||.+........   .+...........+...+++++.++
T Consensus       176 t~~Y~aPE~~~~~~~----s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~l  251 (483)
T 3sv0_A          176 TARYASVNTHLGIEQ----SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASY  251 (483)
T ss_dssp             CTTTCCHHHHTTCCC----CHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHH
T ss_pred             CccccCHHHhcCCCC----ChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHH
Confidence            999999999998877    999999999999999999999998744211110   0001111122233446789999999


Q ss_pred             HHHHhccCCCCCCChhHHHHHHHhhccc
Q psy16840        277 MRDCWAEAPESRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       277 i~~cl~~~P~~Rps~~~i~~~l~~~~~~  304 (413)
                      |..||+.+|.+||++.+|++.|+.+...
T Consensus       252 i~~cl~~dP~~RPs~~el~~~L~~l~~~  279 (483)
T 3sv0_A          252 FHYCRSLRFDDKPDYSYLKRLFRDLFIR  279 (483)
T ss_dssp             HHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence            9999999999999999999999887543

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.95  E-value=9.5e-30  Score=239.23  Aligned_cols=163  Identities=23%  Similarity=0.351  Sum_probs=123.5

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++........ ........+|+.|+||
T Consensus       162 ~~~~~~~~~~--qi~--~~l~~lH~~~i-vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aP  235 (333)
T 2i1m_A          162 STRDLLHFSS--QVA--QGMAFLASKNC-IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-YIVKGNARLPVKWMAP  235 (333)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTT-SEECSSCEECGGGSCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHhcCCc-ccCCcccceEEECCCCeEEECccccccccccccc-eeecCCCCCCccccCH
Confidence            3344445555  777  99999999999 9999999999999999999999999986543221 1122334567899999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |++.+..+    +.++||||||+++|+|++ |..||.+................+.   .+..+++.+.+++.+||+.||
T Consensus       236 E~~~~~~~----~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p  308 (333)
T 2i1m_A          236 ESIFDCVY----TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMA---QPAFAPKNIYSIMQACWALEP  308 (333)
T ss_dssp             HHHHHCCC----CHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSG
T ss_pred             HHhccCCC----ChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHhccCh
Confidence            99987766    999999999999999998 9999976442221111111111111   124578899999999999999


Q ss_pred             CCCCChhHHHHHHHhhc
Q psy16840        286 ESRPDFPTIRARLKHMK  302 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~  302 (413)
                      .+|||+.++++.|+.+.
T Consensus       309 ~~Rps~~~l~~~L~~~~  325 (333)
T 2i1m_A          309 THRPTFQQICSFLQEQA  325 (333)
T ss_dssp             GGSCCHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHH
Confidence            99999999999887664

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.95  E-value=1.6e-29  Score=231.89  Aligned_cols=159  Identities=23%  Similarity=0.343  Sum_probs=119.3

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  |++  .||.|||++|+ +||||||+|||++.++.+||+|||++........  .......+++.|+|||++
T Consensus       114 ~~~~~~~--~i~--~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~  186 (281)
T 3cc6_A          114 TLVLYSL--QIC--KAMAYLESINC-VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY--YKASVTRLPIKWMSPESI  186 (281)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTC-CCCCCSGGGEEEEETTEEEECCCCGGGCC-----------CCCCCGGGCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCc-ccCCCccceEEECCCCcEEeCccCCCcccccccc--cccccCCCCcceeCchhh
Confidence            3344444  777  99999999999 9999999999999999999999999876543221  112334568899999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      .+..+    +.++||||||+++|+|++ |..||.............. ...+.   .+..+++.+.+++.+||+.||.+|
T Consensus       187 ~~~~~----~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~l~~li~~~l~~~p~~R  258 (281)
T 3cc6_A          187 NFRRF----TTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK-GDRLP---KPDLCPPVLYTLMTRCWDYDPSDR  258 (281)
T ss_dssp             HHCCC----CHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHH-TCCCC---CCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             ccCCC----CchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhc-CCCCC---CCCCCCHHHHHHHHHHccCCchhC
Confidence            87766    899999999999999998 9999975432221111100 01111   225678999999999999999999


Q ss_pred             CChhHHHHHHHhhcc
Q psy16840        289 PDFPTIRARLKHMKD  303 (413)
Q Consensus       289 ps~~~i~~~l~~~~~  303 (413)
                      ||+.++++.|+.+..
T Consensus       259 ps~~ell~~L~~~~~  273 (281)
T 3cc6_A          259 PRFTELVCSLSDVYQ  273 (281)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHH
Confidence            999999999887643

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.95  E-value=2.8e-29  Score=233.94  Aligned_cols=162  Identities=26%  Similarity=0.385  Sum_probs=118.5

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++......... .......+++.|+|||
T Consensus       146 ~~~~~~i~~--qi~--~aL~~LH~~~i-vH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE  219 (313)
T 3brb_A          146 LQTLLKFMV--DIA--LGMEYLSNRNF-LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY-RQGRIAKMPVKWIAIE  219 (313)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHTTTC-CCCCCSGGGEEECTTSCEEECSCSCC-----------------CCGGGSCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCc-ccCCCCcceEEEcCCCcEEEeecCcceeccccccc-CcccccCCCccccCch
Confidence            333444445  777  99999999999 99999999999999999999999998765432211 1123345688999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      .+.+..+    +.++||||||+++|+|++ |..||.+............ ..++   ..+..+++.+.+++.+||+.||.
T Consensus       220 ~~~~~~~----~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~l~~li~~~l~~dp~  291 (313)
T 3brb_A          220 SLADRVY----TSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH-GHRL---KQPEDCLDELYEIMYSCWRTDPL  291 (313)
T ss_dssp             HHHSSCC----CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-TCCC---CCBTTCCHHHHHHHHHTTCSSGG
T ss_pred             hhcCCCc----cchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHc-CCCC---CCCccccHHHHHHHHHHcCCChh
Confidence            9988776    999999999999999999 8899976543221111111 1111   12357889999999999999999


Q ss_pred             CCCChhHHHHHHHhhcc
Q psy16840        287 SRPDFPTIRARLKHMKD  303 (413)
Q Consensus       287 ~Rps~~~i~~~l~~~~~  303 (413)
                      +|||+.++++.|+.+..
T Consensus       292 ~Rps~~~l~~~L~~l~~  308 (313)
T 3brb_A          292 DRPTFSVLRLQLEKLLE  308 (313)
T ss_dssp             GSCCHHHHHHHHHHHHH
T ss_pred             hCcCHHHHHHHHHHHHH
Confidence            99999999999988754

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.95  E-value=1.3e-29  Score=230.72  Aligned_cols=160  Identities=23%  Similarity=0.419  Sum_probs=122.4

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  |++  .||+|||++|+ +||||||+||+++.++.+||+|||++........  .......+|+.|+|||++
T Consensus       105 ~~~~i~~--qi~--~~l~~lH~~~i-~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~  177 (268)
T 3sxs_A          105 QLLEMCY--DVC--EGMAFLESHQF-IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY--VSSVGTKFPVKWSAPEVF  177 (268)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-EESSCSGGGEEECTTCCEEECCTTCEEECCTTCE--EECCSCCCCGGGCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCe-ecCCcCcceEEECCCCCEEEccCccceecchhhh--hcccCCCcCcccCCHHHH
Confidence            3344444  777  99999999999 9999999999999999999999999876543221  112334567889999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      .+..+    +.++||||||+++|+|++ |..||.............. ...+.   .+..+++.+.+++.+||+.||.+|
T Consensus       178 ~~~~~----~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~l~~li~~~l~~~p~~R  249 (268)
T 3sxs_A          178 HYFKY----SSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ-GHRLY---RPHLASDTIYQIMYSCWHELPEKR  249 (268)
T ss_dssp             HHSEE----ETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT-TCCCC---CCTTSCHHHHHHHHHTTCSSGGGS
T ss_pred             hccCC----chhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHc-CCCCC---CCCcChHHHHHHHHHHcCCChhhC
Confidence            88776    899999999999999999 9999976442211111111 11111   124578899999999999999999


Q ss_pred             CChhHHHHHHHhhccc
Q psy16840        289 PDFPTIRARLKHMKDG  304 (413)
Q Consensus       289 ps~~~i~~~l~~~~~~  304 (413)
                      ||+.++++.|+.+...
T Consensus       250 ps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          250 PTFQQLLSSIEPLREK  265 (268)
T ss_dssp             CCHHHHHHHHGGGCC-
T ss_pred             cCHHHHHHHHHHhhhc
Confidence            9999999999988664

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.95  E-value=3.9e-29  Score=243.40  Aligned_cols=155  Identities=16%  Similarity=0.153  Sum_probs=118.5

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEc---CCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVT---SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...++.  ||+  .||.|||++|+ +||||||+|||++   .++.+||+|||++.......   .......||+.|+|||
T Consensus       112 ~~~i~~--qil--~aL~~lH~~gi-vHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~---~~~~~~~gt~~Y~APE  183 (444)
T 3soa_A          112 ASHCIQ--QIL--EAVLHCHQMGV-VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ---QAWFGFAGTPGYLSPE  183 (444)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-BCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC---CBCCCSCSCGGGCCHH
T ss_pred             HHHHHH--HHH--HHHHHHHHCCc-cccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC---ceeecccCCcccCCHH
Confidence            344555  788  99999999999 9999999999998   45789999999997654322   1223467999999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      ++.+..+    +.++|||||||++|+|++|..||.+.+.......+.........+ ....+++++.++|.+||+.||.+
T Consensus       184 ~l~~~~~----~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~~L~~dP~~  258 (444)
T 3soa_A          184 VLRKDPY----GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSP-EWDTVTPEAKDLINKMLTINPSK  258 (444)
T ss_dssp             HHTTCCB----CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTT-TTTTSCHHHHHHHHHHSCSSTTT
T ss_pred             HhcCCCC----CCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCcc-ccccCCHHHHHHHHHHcCCChhH
Confidence            9988776    899999999999999999999997644221111111111111111 12467899999999999999999


Q ss_pred             CCChhHHHHHH
Q psy16840        288 RPDFPTIRARL  298 (413)
Q Consensus       288 Rps~~~i~~~l  298 (413)
                      |||+.+++++.
T Consensus       259 Rpta~e~L~hp  269 (444)
T 3soa_A          259 RITAAEALKHP  269 (444)
T ss_dssp             SCCHHHHHHSC
T ss_pred             CCCHHHHhcCc
Confidence            99999998753

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.95  E-value=1.5e-29  Score=247.69  Aligned_cols=160  Identities=27%  Similarity=0.430  Sum_probs=119.8

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||+|||++++ +||||||+|||++.++.+||+|||+++.......  .......+++.|+|||++.
T Consensus       282 ~~~i~~--qi~--~~l~~LH~~~i-vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~--~~~~~~~~~~~y~aPE~~~  354 (452)
T 1fmk_A          282 LVDMAA--QIA--SGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARLIEDNEY--TARQGAKFPIKWTAPEAAL  354 (452)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCCCTTC----------------CCGGGSCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHhCCe-eCCCCChhhEEECCCCCEEECCCccceecCCCce--ecccCCcccccccCHhHHh
Confidence            344444  777  99999999999 9999999999999999999999999986543221  1122345678899999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++||||||+++|||++ |..||.+....+..... ....++.   .+..+++.+.++|.+||+.||++||
T Consensus       355 ~~~~----~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rp  426 (452)
T 1fmk_A          355 YGRF----TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMP---CPPECPESLHDLMCQCWRKEPEERP  426 (452)
T ss_dssp             HCCC----CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-HTTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCC----CccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCC---CCCCCCHHHHHHHHHHccCChhhCc
Confidence            7766    999999999999999999 99999765422211111 1111222   2357899999999999999999999


Q ss_pred             ChhHHHHHHHhhcccC
Q psy16840        290 DFPTIRARLKHMKDGK  305 (413)
Q Consensus       290 s~~~i~~~l~~~~~~~  305 (413)
                      |+.++++.|+.+....
T Consensus       427 t~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          427 TFEYLQAFLEDYFTST  442 (452)
T ss_dssp             CHHHHHHHHHTTTSCS
T ss_pred             CHHHHHHHHHHHhccC
Confidence            9999999999886544

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.95  E-value=1e-29  Score=234.19  Aligned_cols=162  Identities=23%  Similarity=0.388  Sum_probs=121.1

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.................+|+.|+|||++.
T Consensus       123 ~~~~~~--~i~--~~l~~lH~~~i-~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (291)
T 1u46_A          123 LSRYAV--QVA--EGMGYLESKRF-IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK  197 (291)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTE-ECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHhCCc-ccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhc
Confidence            334444  777  99999999999 9999999999999999999999999877643322222223445788899999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++||||||+++|+|++ |..||.+................+.   .+..+++.+.+++.+||+.||.+||
T Consensus       198 ~~~~----~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rp  270 (291)
T 1u46_A          198 TRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP---RPEDCPQDIYNVMVQCWAHKPEDRP  270 (291)
T ss_dssp             HCEE----EHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCC---CCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             CCCC----CchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCC---CCcCcCHHHHHHHHHHccCCcccCc
Confidence            7766    899999999999999999 9999976542211111111111111   2256889999999999999999999


Q ss_pred             ChhHHHHHHHhhccc
Q psy16840        290 DFPTIRARLKHMKDG  304 (413)
Q Consensus       290 s~~~i~~~l~~~~~~  304 (413)
                      |+.++++.|+.+...
T Consensus       271 s~~~l~~~l~~~~~~  285 (291)
T 1u46_A          271 TFVALRDFLLEAQPT  285 (291)
T ss_dssp             CHHHHHHHHHHHC--
T ss_pred             CHHHHHHHHHHhCcc
Confidence            999999999887653

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.95  E-value=2.1e-29  Score=233.15  Aligned_cols=159  Identities=21%  Similarity=0.236  Sum_probs=118.2

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......   .......||+.|+||
T Consensus       135 ~~~~~~~~~~--qi~--~~l~~lH~~~i-vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aP  206 (298)
T 2zv2_A          135 SEDQARFYFQ--DLI--KGIEYLHYQKI-IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD---ALLSNTVGTPAFMAP  206 (298)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECTTSCEEECCCTTCEECSSSS---CEECCCCSCGGGCCG
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCe-eccCCCHHHEEECCCCCEEEecCCCcccccccc---ccccCCcCCccccCh
Confidence            3444455555  888  99999999999 999999999999999999999999987654321   112345789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+... ..++.++|||||||++|+|++|..||.+..................   ....+++.+.++|.+||+.||.
T Consensus       207 E~~~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~  282 (298)
T 2zv2_A          207 ESLSETRK-IFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFP---DQPDIAEDLKDLITRMLDKNPE  282 (298)
T ss_dssp             GGCCTTCC-CEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---SSSCCCHHHHHHHHHHTCSCTT
T ss_pred             hhhccCCC-CCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCC---CccccCHHHHHHHHHHhhcChh
Confidence            99976542 0126789999999999999999999976432111110000111110   1246789999999999999999


Q ss_pred             CCCChhHHHHH
Q psy16840        287 SRPDFPTIRAR  297 (413)
Q Consensus       287 ~Rps~~~i~~~  297 (413)
                      +|||+.+++++
T Consensus       283 ~R~s~~e~l~h  293 (298)
T 2zv2_A          283 SRIVVPEIKLH  293 (298)
T ss_dssp             TSCCHHHHTTC
T ss_pred             hCCCHHHHhcC
Confidence            99999998764

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.95  E-value=1.6e-29  Score=233.14  Aligned_cols=160  Identities=24%  Similarity=0.395  Sum_probs=121.7

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.................+++.|+|||++.
T Consensus       119 ~~~i~~--qi~--~~l~~LH~~~i-~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  193 (291)
T 1xbb_A          119 IIELVH--QVS--MGMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN  193 (291)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHhCCe-EcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhc
Confidence            334444  777  99999999999 9999999999999999999999999876543322212222334678899999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++||||||+++|+|++ |..||.+........... ...++.   .+..+++.+.+++.+||+.||.+||
T Consensus       194 ~~~~----~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rp  265 (291)
T 1xbb_A          194 YYKF----SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-KGERMG---CPAGCPREMYDLMNLCWTYDVENRP  265 (291)
T ss_dssp             HCEE----EHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCC---CCTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred             cCCC----ChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCC---CCCCCCHHHHHHHHHHcCCChhhCc
Confidence            7766    899999999999999999 999997644221111111 111111   2357889999999999999999999


Q ss_pred             ChhHHHHHHHhhcc
Q psy16840        290 DFPTIRARLKHMKD  303 (413)
Q Consensus       290 s~~~i~~~l~~~~~  303 (413)
                      |+.++++.|+.+..
T Consensus       266 s~~~l~~~L~~~~~  279 (291)
T 1xbb_A          266 GFAAVELRLRNYYY  279 (291)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH
Confidence            99999999987754

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.95  E-value=2e-29  Score=249.49  Aligned_cols=161  Identities=29%  Similarity=0.504  Sum_probs=125.4

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||+|||++++ +||||||+|||++.++.+||+|||+++.......  .......+++.|+|||++
T Consensus       319 ~~~~i~~--qi~--~~L~~LH~~~i-vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~~~~~y~aPE~~  391 (495)
T 1opk_A          319 VLLYMAT--QIS--SAMEYLEKKNF-IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESL  391 (495)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE--ECCTTCCCCGGGCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCc-ccCCCChhhEEECCCCcEEEeecccceeccCCce--eecCCCcCCcceeCHhHH
Confidence            3344444  777  99999999999 9999999999999999999999999987543221  112234567889999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      .+..+    +.++|||||||++|||++ |..||.+......... .....+..   .+..+++.+.+||.+||+.||.+|
T Consensus       392 ~~~~~----~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~R  463 (495)
T 1opk_A          392 AYNKF----SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-LEKDYRME---RPEGCPEKVYELMRACWQWNPSDR  463 (495)
T ss_dssp             HHCEE----CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-HHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             hcCCC----CcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCCCCC---CCCCCCHHHHHHHHHHcCcChhHC
Confidence            88776    999999999999999999 9999987543222111 11112221   235789999999999999999999


Q ss_pred             CChhHHHHHHHhhcccC
Q psy16840        289 PDFPTIRARLKHMKDGK  305 (413)
Q Consensus       289 ps~~~i~~~l~~~~~~~  305 (413)
                      ||+.++++.|+.+....
T Consensus       464 Ps~~el~~~L~~~~~~~  480 (495)
T 1opk_A          464 PSFAEIHQAFETMFQES  480 (495)
T ss_dssp             CCHHHHHHHHHTSCSSS
T ss_pred             cCHHHHHHHHHHHHhcc
Confidence            99999999999886543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.95  E-value=4.8e-29  Score=230.65  Aligned_cols=155  Identities=24%  Similarity=0.423  Sum_probs=118.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC-CcccccccCcccccCcccccCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSLLWKAPELLRDTHAPIR  217 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~  217 (413)
                      |++  .||.|||++|+ +||||||+|||++.++.+||+|||++......... ........+|+.|+|||.+.+..+   
T Consensus       136 ql~--~~l~~lH~~~i-~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~---  209 (298)
T 3f66_A          136 QVA--KGMKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF---  209 (298)
T ss_dssp             HHH--HHHHHHHHTTC-CCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCC---
T ss_pred             HHH--HHHHHHHhCCc-cCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCC---
Confidence            667  99999999999 99999999999999999999999999865433221 122334567889999999988776   


Q ss_pred             CCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHH
Q psy16840        218 GTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA  296 (413)
Q Consensus       218 ~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~  296 (413)
                       +.++||||||+++|+|++ |.+||.+.............. .+   ..+..+++.+.+++.+||+.||.+|||+.++++
T Consensus       210 -~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          210 -TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RL---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             -CHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTC-CC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -ChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCC-CC---CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence             899999999999999999 566676544322211111111 11   123567889999999999999999999999999


Q ss_pred             HHHhhccc
Q psy16840        297 RLKHMKDG  304 (413)
Q Consensus       297 ~l~~~~~~  304 (413)
                      .|+.+...
T Consensus       285 ~L~~~~~~  292 (298)
T 3f66_A          285 RISAIFST  292 (298)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHh
Confidence            99887654

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.95  E-value=2e-29  Score=229.90  Aligned_cols=156  Identities=28%  Similarity=0.491  Sum_probs=114.2

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCC---CcccCCCCCCCeEEcC--------CeEEEEeccccccccccccCCCcccccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSP---IGCHGNLKSSNCVVTS--------RWVLQVTDFGLHELRHCAENDSIGEHQY  197 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~---iiiHrdlkp~Nill~~--------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  197 (413)
                      ..+..++.  |++  .||.|||++|   + +||||||+|||++.        ++.+||+|||++.......     ....
T Consensus       105 ~~~~~i~~--~l~--~~l~~lH~~~~~~i-~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~  174 (271)
T 3dtc_A          105 DILVNWAV--QIA--RGMNYLHDEAIVPI-IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-----KMSA  174 (271)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHSSSSCC-CCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-----------------
T ss_pred             HHHHHHHH--HHH--HHHHHHHhCCCCce-eecCCchHHEEEecccccccccCcceEEccCCccccccccc-----ccCC
Confidence            33444555  777  9999999999   6 89999999999985        6789999999987653221     2244


Q ss_pred             cCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHH
Q psy16840        198 YRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACM  277 (413)
Q Consensus       198 ~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (413)
                      .||+.|+|||.+.+..+    +.++||||||+++|+|++|..||.+................+.   .+..+++.+.+++
T Consensus       175 ~~~~~y~aPE~~~~~~~----~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li  247 (271)
T 3dtc_A          175 AGAYAWMAPEVIRASMF----SKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP---IPSTCPEPFAKLM  247 (271)
T ss_dssp             -CCGGGSCHHHHHHCCC----SHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCC---CCTTCCHHHHHHH
T ss_pred             CCccceeCHHHhccCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCC---CCcccCHHHHHHH
Confidence            68999999999988776    8999999999999999999999976432111111111111111   2357889999999


Q ss_pred             HHHhccCCCCCCChhHHHHHHHhh
Q psy16840        278 RDCWAEAPESRPDFPTIRARLKHM  301 (413)
Q Consensus       278 ~~cl~~~P~~Rps~~~i~~~l~~~  301 (413)
                      .+||+.||.+|||+.++++.|+.+
T Consensus       248 ~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          248 EDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             HHHhcCCcccCcCHHHHHHHHhcC
Confidence            999999999999999999998753

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.95  E-value=4.4e-29  Score=236.03  Aligned_cols=159  Identities=17%  Similarity=0.349  Sum_probs=120.5

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  |++  .||.|||++|+ +||||||+|||++.++.+||+|||++.....       .....||+.|+||
T Consensus       152 ~~~~~~~i~~--qi~--~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-------~~~~~gt~~y~aP  219 (348)
T 1u5q_A          152 QEVEIAAVTH--GAL--QGLAYLHSHNM-IHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANSFVGTPYWMAP  219 (348)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-BCCCCSGGGEEEETTTEEEECCCTTCBSSSS-------BCCCCSCGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCe-eeCCCCHHHEEECCCCCEEEeeccCceecCC-------CCcccCCcceeCH
Confidence            3344445555  777  99999999999 9999999999999999999999999876432       2345789999999


Q ss_pred             ccccC---CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        207 ELLRD---THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       207 E~~~~---~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      |++.+   ..+    +.++|||||||++|||++|..||.+.+............ .+..  .+..+++.+.++|.+||+.
T Consensus       220 E~~~~~~~~~~----~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~l~~li~~~l~~  292 (348)
T 1u5q_A          220 EVILAMDEGQY----DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-SPAL--QSGHWSEYFRNFVDSCLQK  292 (348)
T ss_dssp             HHHHTTSSCCB----CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-CCCC--CCTTSCHHHHHHHHHHTCS
T ss_pred             hhhccccCCCC----CcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-CCCC--CCCCCCHHHHHHHHHHccc
Confidence            99853   334    889999999999999999999997643211111111111 1111  1246788999999999999


Q ss_pred             CCCCCCChhHHHHHHHhhccc
Q psy16840        284 APESRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l~~~~~~  304 (413)
                      ||.+|||+.++++...-....
T Consensus       293 dP~~Rps~~~ll~h~~~~~~~  313 (348)
T 1u5q_A          293 IPQDRPTSEVLLKHRFVLRER  313 (348)
T ss_dssp             SGGGSCCHHHHTTCHHHHSCC
T ss_pred             ChhhCcCHHHHhhChhhhccC
Confidence            999999999999876655443

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.95  E-value=2e-29  Score=242.02  Aligned_cols=159  Identities=18%  Similarity=0.254  Sum_probs=112.8

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++ ++.+||+|||+++....... ........||+.|+|||++.
T Consensus       157 ~~~i~~--qi~--~aL~~lH~~~i-vHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~  229 (390)
T 2zmd_A          157 RKSYWK--NML--EAVHTIHQHGI-VHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-SVVKDSQVGAVNYMPPEAIK  229 (390)
T ss_dssp             HHHHHH--HHH--HHHHHHHTTTC-CCCCCCGGGEEES-SSCEEECCCSSSCCC----------CCSCCCGGGCCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-eecCCCHHHEEEE-CCeEEEEecCccccccCCCc-cccCCCCCcCCCccChHHhh
Confidence            344555  788  99999999999 9999999999996 57899999999986543221 11223457999999999987


Q ss_pred             CCCC-------CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC-CCCCCCCCCCCCCcccccCCChHHHHHHHHHHhc
Q psy16840        211 DTHA-------PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE-PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWA  282 (413)
Q Consensus       211 ~~~~-------~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (413)
                      +...       ...++.++|||||||++|||++|..||....... .............   .+...++++.++|.+||+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~L~  306 (390)
T 2zmd_A          230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE---FPDIPEKDLQDVLKCCLK  306 (390)
T ss_dssp             CC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCC---CCCCSCHHHHHHHHHHTC
T ss_pred             hccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCC---CCccchHHHHHHHHHHcc
Confidence            6211       0124899999999999999999999997532110 0000111111111   224557899999999999


Q ss_pred             cCCCCCCChhHHHHHHH
Q psy16840        283 EAPESRPDFPTIRARLK  299 (413)
Q Consensus       283 ~~P~~Rps~~~i~~~l~  299 (413)
                      .||.+|||+.++++...
T Consensus       307 ~dP~~Rps~~ell~hp~  323 (390)
T 2zmd_A          307 RDPKQRISIPELLAHPY  323 (390)
T ss_dssp             SSTTTSCCHHHHHTSHH
T ss_pred             cChhhCCCHHHHhhCcC
Confidence            99999999999987654

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.95  E-value=1.1e-28  Score=230.59  Aligned_cols=164  Identities=17%  Similarity=0.178  Sum_probs=119.8

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEE----cCCeEEEEeccccccccccccCCCcccccccCccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVV----TSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL  202 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~  202 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||+    +.++.+||+|||+++......    ......||+.
T Consensus       110 ~~~~~~~i~~--qi~--~~L~~LH~~~i-vH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~----~~~~~~gt~~  180 (319)
T 4euu_A          110 PESEFLIVLR--DVV--GGMNHLRENGI-VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----QFVSLYGTEE  180 (319)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC----CBCCCCSCGG
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCE-ecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC----ceeecccCCC
Confidence            3333444555  777  99999999999 999999999999    888999999999998654322    1234578999


Q ss_pred             ccCccccc--------CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC-------------------CCC
Q psy16840        203 WKAPELLR--------DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE-------------------DCE  255 (413)
Q Consensus       203 y~aPE~~~--------~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~-------------------~~~  255 (413)
                      |+|||++.        +..+    +.++|||||||++|||++|..||...........                   ...
T Consensus       181 y~aPE~~~~~~~~~~~~~~~----~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  256 (319)
T 4euu_A          181 YLHPDMYERAVLRKDHQKKY----GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAEN  256 (319)
T ss_dssp             GCCHHHHHHHTSCCCCCCCB----CTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTT
T ss_pred             ccCHHHhhhccccccccCCC----CcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccC
Confidence            99999986        2333    8999999999999999999999964332111000                   000


Q ss_pred             CC-----CCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        256 EP-----FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       256 ~~-----~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      ..     ..+....+...+++.+.+++.+||+.||++|||+.++++.......
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~  309 (319)
T 4euu_A          257 GPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (319)
T ss_dssp             CCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred             CccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence            00     0011112224567789999999999999999999999998876543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.95  E-value=9.1e-29  Score=231.84  Aligned_cols=165  Identities=21%  Similarity=0.296  Sum_probs=120.9

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcC---CCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRS---PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~---~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      +..+..++.  |++  .||+|||++   |+ +||||||+|||++.++.+||+|||++.......  ........||+.|+
T Consensus       130 ~~~~~~i~~--~i~--~~l~~lH~~~~~~i-vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~gt~~y~  202 (326)
T 3uim_A          130 WPKRQRIAL--GSA--RGLAYLHDHCDPKI-IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD--THVTTAVRGTIGHI  202 (326)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHSSSSCE-ECCCCSGGGEEECTTCCEEECCCSSCEECCSSS--SCEECCCCSCGGGC
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCCCCe-EeCCCchhhEEECCCCCEEeccCccccccCccc--ccccccccCCcCcc
Confidence            333444444  677  999999999   99 999999999999999999999999998654322  12233456899999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC-------------CCCCCCCCCCCCc-ccccCCCh
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEP-------------KGEDCEEPFRPNL-ELLRDSCE  270 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~-------------~~~~~~~~~~~~~-~~~~~~~~  270 (413)
                      |||++.+..+    +.++||||||+++|+|++|..||........             ............. ...+...+
T Consensus       203 aPE~~~~~~~----~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (326)
T 3uim_A          203 APEYLSTGKS----SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEV  278 (326)
T ss_dssp             CHHHHHHSEE----CHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHH
T ss_pred             CHHHhccCCC----CccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHH
Confidence            9999988776    9999999999999999999999952110000             0000000001100 11123456


Q ss_pred             HHHHHHHHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        271 PFVLACMRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       271 ~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      +.+.+++.+||+.||.+|||+.++++.|+....
T Consensus       279 ~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          279 EQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             HHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence            789999999999999999999999999986543

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.95  E-value=2.2e-29  Score=234.59  Aligned_cols=152  Identities=16%  Similarity=0.138  Sum_probs=115.1

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +.+..+..++.  ||+  .||+|||++++ +||||||+|||++.++.+||+|||++.......    ......||+.|+|
T Consensus       154 l~~~~~~~i~~--qi~--~aL~~LH~~~i-vH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y~a  224 (311)
T 3p1a_A          154 LPEAQVWGYLR--DTL--LALAHLHSQGL-VHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG----AGEVQEGDPRYMA  224 (311)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECGGGCEEECCCTTCEECC----------CCCCCGGGCC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCE-ecCCCCHHHEEECCCCCEEEccceeeeecccCC----CCcccCCCccccC
Confidence            34444455555  777  99999999999 999999999999999999999999987653222    1234468999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      ||++.+ .+    +.++|||||||++|||++|..||.+.....   .......   .+..+..+++++.+++.+||+.||
T Consensus       225 PE~~~~-~~----~~~~DiwslG~il~el~~g~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~l~~li~~~L~~dP  293 (311)
T 3p1a_A          225 PELLQG-SY----GTAADVFSLGLTILEVACNMELPHGGEGWQ---QLRQGYL---PPEFTAGLSSELRSVLVMMLEPDP  293 (311)
T ss_dssp             GGGGGT-CC----STHHHHHHHHHHHHHHHHTCCCCSSHHHHH---HHTTTCC---CHHHHTTSCHHHHHHHHHHSCSST
T ss_pred             HhHhcC-CC----CchhhHHHHHHHHHHHHhCCCCCCCccHHH---HHhccCC---CcccccCCCHHHHHHHHHHcCCCh
Confidence            999876 34    899999999999999999976654322111   1111111   122346789999999999999999


Q ss_pred             CCCCChhHHHHH
Q psy16840        286 ESRPDFPTIRAR  297 (413)
Q Consensus       286 ~~Rps~~~i~~~  297 (413)
                      ++|||+.++++.
T Consensus       294 ~~Rpt~~ell~h  305 (311)
T 3p1a_A          294 KLRATAEALLAL  305 (311)
T ss_dssp             TTSCCHHHHHTS
T ss_pred             hhCcCHHHHHhC
Confidence            999999999864

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.95  E-value=4.8e-29  Score=234.52  Aligned_cols=159  Identities=18%  Similarity=0.284  Sum_probs=103.2

Q ss_pred             HhhhccccCCchHHhhHhhhcCC--CcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC---------cccccccC
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSP--IGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS---------IGEHQYYR  199 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~--iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~---------~~~~~~~g  199 (413)
                      +..++.  ||+  .||.|||+++  + +||||||+|||++.++.+||+|||++..........         .......|
T Consensus       138 ~~~i~~--qi~--~~l~~LH~~~~~i-vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (337)
T 3ll6_A          138 VLKIFY--QTC--RAVQHMHRQKPPI-IHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT  212 (337)
T ss_dssp             HHHHHH--HHH--HHHHHHHTSSSCC-BCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC--------------------
T ss_pred             HHHHHH--HHH--HHHHHHHhCCCCE-EEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccC
Confidence            344444  666  9999999999  8 999999999999999999999999998654322111         01123468


Q ss_pred             cccccCccccc---CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHH
Q psy16840        200 SLLWKAPELLR---DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLAC  276 (413)
Q Consensus       200 t~~y~aPE~~~---~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (413)
                      |+.|+|||++.   +..+    +.++||||||+++|+|++|..||.+..........    ....   .....++.+.++
T Consensus       213 t~~y~aPE~~~~~~~~~~----~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~l  281 (337)
T 3ll6_A          213 TPMYRTPEIIDLYSNFPI----GEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGK----YSIP---PHDTQYTVFHSL  281 (337)
T ss_dssp             -----------CCTTSCS----SHHHHHHHHHHHHHHHHHSSCCC----------------CCCC---TTCCSSGGGHHH
T ss_pred             CCCcCChhhhhccccCCC----ChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCc----ccCC---cccccchHHHHH
Confidence            99999999984   3333    89999999999999999999999764432211111    1111   124566779999


Q ss_pred             HHHHhccCCCCCCChhHHHHHHHhhcccC
Q psy16840        277 MRDCWAEAPESRPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       277 i~~cl~~~P~~Rps~~~i~~~l~~~~~~~  305 (413)
                      +.+||+.||.+|||+.++++.|+.+....
T Consensus       282 i~~~l~~~p~~Rps~~e~l~~l~~~~~~~  310 (337)
T 3ll6_A          282 IRAMLQVNPEERLSIAEVVHQLQEIAAAR  310 (337)
T ss_dssp             HHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            99999999999999999999998876543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.95  E-value=5.5e-29  Score=235.54  Aligned_cols=158  Identities=16%  Similarity=0.110  Sum_probs=111.1

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC---CeEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS---RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      ...+..++.  ||+  .||.|||++|+ +||||||+|||++.   ++.+||+|||+++......    ......||+.|+
T Consensus       147 ~~~~~~i~~--qi~--~~L~~LH~~~i-vH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~  217 (349)
T 2w4o_A          147 ERDAADAVK--QIL--EAVAYLHENGI-VHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV----LMKTVCGTPGYC  217 (349)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEESSSSTTCCEEECCCC--------------------CGGGS
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCe-EecCCCcccEEEecCCCCCCEEEccCccccccCccc----ccccccCCCCcc
Confidence            333444555  777  99999999999 99999999999975   7899999999987653221    123457899999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-CCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-EDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      |||++.+..+    +.++|||||||++|||++|..||.+........ .+..... .........+++++.+||.+||+.
T Consensus       218 aPE~~~~~~~----~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~li~~~L~~  292 (349)
T 2w4o_A          218 APEILRGCAY----GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY-YFISPWWDEVSLNAKDLVRKLIVL  292 (349)
T ss_dssp             CHHHHTTCCC----CTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC-CCCTTTTTTSCHHHHHHHHTTSCS
T ss_pred             CHHHhcCCCC----CcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC-ccCCchhhhCCHHHHHHHHHHccC
Confidence            9999988766    899999999999999999999997644221000 0111111 111112256889999999999999


Q ss_pred             CCCCCCChhHHHHHHH
Q psy16840        284 APESRPDFPTIRARLK  299 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l~  299 (413)
                      ||++|||+.++++...
T Consensus       293 dP~~Rpt~~e~l~hp~  308 (349)
T 2w4o_A          293 DPKKRLTTFQALQHPW  308 (349)
T ss_dssp             SGGGSCCHHHHHHSTT
T ss_pred             ChhhCcCHHHHhcCcc
Confidence            9999999999987643

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.95  E-value=1.5e-29  Score=235.66  Aligned_cols=161  Identities=20%  Similarity=0.280  Sum_probs=111.9

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++.................||+.|+|||++.
T Consensus       118 ~~~~~~--qi~--~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  192 (311)
T 3ork_A          118 AIEVIA--DAC--QALNFSHQNGI-IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR  192 (311)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHHCCC-CcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhc
Confidence            334444  777  99999999999 9999999999999999999999999987654333323334557899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +..+    +.++||||||+++|+|++|..||.+................+ .......+++++.++|.+||+.||.+||+
T Consensus       193 ~~~~----~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~R~~  267 (311)
T 3ork_A          193 GDSV----DARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENRYQ  267 (311)
T ss_dssp             TCCC----CHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC-HHHHSTTCCHHHHHHHHHHTCSSGGGSCS
T ss_pred             CCCC----CchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC-cccccCCCCHHHHHHHHHHHhcCHhhChh
Confidence            8776    899999999999999999999997644221111111111111 11223568899999999999999999997


Q ss_pred             hhHHHH-HHHhh
Q psy16840        291 FPTIRA-RLKHM  301 (413)
Q Consensus       291 ~~~i~~-~l~~~  301 (413)
                      ..+++. .+...
T Consensus       268 ~~~~l~~~l~~~  279 (311)
T 3ork_A          268 TAAEMRADLVRV  279 (311)
T ss_dssp             SHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHH
Confidence            766554 44443

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.95  E-value=4.9e-29  Score=233.23  Aligned_cols=162  Identities=14%  Similarity=0.250  Sum_probs=122.6

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +....+..++.  |++  .||.|||++|+ +||||||+|||++.++.+||+|||++.......   .......||+.|+|
T Consensus       138 l~~~~~~~i~~--qi~--~~L~~LH~~~i-vH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~a  209 (321)
T 2c30_A          138 LNEEQIATVCE--AVL--QALAYLHAQGV-IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---PKRKSLVGTPYWMA  209 (321)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTCCEEECCCTTCEECCSSS---CCBCCCCSCGGGCC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCe-ecCCCCHHHEEECCCCcEEEeeeeeeeecccCc---cccccccCCccccC
Confidence            33444455555  777  99999999999 999999999999999999999999987654321   12345578999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      ||++.+..+    +.++||||||+++|+|++|..||.+........... ....+... ....+++.+.+++.+||+.||
T Consensus       210 PE~~~~~~~----~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~l~~li~~~l~~dp  283 (321)
T 2c30_A          210 PEVISRSLY----ATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR-DSPPPKLK-NSHKVSPVLRDFLERMLVRDP  283 (321)
T ss_dssp             HHHHTTCCB----CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-HSSCCCCT-TGGGSCHHHHHHHHHHSCSST
T ss_pred             HhhhcCCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-cCCCCCcC-ccccCCHHHHHHHHHHccCCh
Confidence            999988776    899999999999999999999997643211111000 01111111 124578899999999999999


Q ss_pred             CCCCChhHHHHHHHhh
Q psy16840        286 ESRPDFPTIRARLKHM  301 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~  301 (413)
                      .+|||+.++++...-.
T Consensus       284 ~~Rps~~ell~hp~~~  299 (321)
T 2c30_A          284 QERATAQELLDHPFLL  299 (321)
T ss_dssp             TTSCCHHHHHTSGGGG
T ss_pred             hhCcCHHHHhcChhhc
Confidence            9999999998865443

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.95  E-value=1.1e-28  Score=231.41  Aligned_cols=157  Identities=18%  Similarity=0.226  Sum_probs=120.0

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe----EEEEeccccccccccccCCCcccccccCcccc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW----VLQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~----~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      ...+..++.  ||+  .||.|||++|+ +||||||+|||++.++    .+||+|||+++......    ......||+.|
T Consensus       113 ~~~~~~i~~--qi~--~al~~lH~~~i-vH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y  183 (326)
T 2y0a_A          113 EEEATEFLK--QIL--NGVYYLHSLQI-AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFGTPEF  183 (326)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS----CCCCCCSCTTT
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCe-EcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC----ccccccCCcCc
Confidence            334445555  788  99999999999 9999999999999877    89999999997654221    12345789999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      +|||++.+..+    +.++|||||||++|+|++|..||.+................. .......+++.+.++|.+||..
T Consensus       184 ~aPE~~~~~~~----~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~  258 (326)
T 2y0a_A          184 VAPEIVNYEPL----GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLLVK  258 (326)
T ss_dssp             CCHHHHTTCCC----CTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCC-CHHHHTTSCHHHHHHHHHHSCS
T ss_pred             CCceeecCCCC----CcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCc-CccccccCCHHHHHHHHHHccC
Confidence            99999987776    899999999999999999999997643221111111111111 1122356889999999999999


Q ss_pred             CCCCCCChhHHHHHH
Q psy16840        284 APESRPDFPTIRARL  298 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l  298 (413)
                      ||.+|||+.+++++.
T Consensus       259 dP~~Rpt~~e~l~hp  273 (326)
T 2y0a_A          259 DPKKRMTIQDSLQHP  273 (326)
T ss_dssp             SGGGSCCHHHHHHST
T ss_pred             ChhhCCCHHHHhcCC
Confidence            999999999998754

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.95  E-value=1e-29  Score=246.73  Aligned_cols=160  Identities=13%  Similarity=0.152  Sum_probs=119.0

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++......  .......+||+.|+|||
T Consensus       174 e~~~~~~~~--qi~--~aL~~LH~~gi-iHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~--~~~~~~~~GT~~Y~APE  246 (437)
T 4aw2_A          174 EEMARFYLA--EMV--IAIDSVHQLHY-VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--TVQSSVAVGTPDYISPE  246 (437)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--CEECCSCCSCGGGCCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCe-EecccCHHHeeEcCCCCEEEcchhhhhhcccCC--CcccccccCCcCeeChH
Confidence            333344444  777  99999999999 999999999999999999999999997653221  12233467999999999


Q ss_pred             ccc-----CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhc
Q psy16840        208 LLR-----DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWA  282 (413)
Q Consensus       208 ~~~-----~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (413)
                      ++.     ...+    +.++|||||||++|||++|+.||.+.+..+....+.....+...+.....+++++.+||.+||.
T Consensus       247 ~l~~~~~~~~~~----~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~  322 (437)
T 4aw2_A          247 ILQAMEGGKGRY----GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLIC  322 (437)
T ss_dssp             HHHHHHTSCCEE----CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSS
T ss_pred             HHhhcccCCCCC----CCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhc
Confidence            987     3334    8999999999999999999999987543222222211111111222224588999999999998


Q ss_pred             cCCCC--CCChhHHHHHH
Q psy16840        283 EAPES--RPDFPTIRARL  298 (413)
Q Consensus       283 ~~P~~--Rps~~~i~~~l  298 (413)
                      .+|++  ||++++++++.
T Consensus       323 ~~~~r~~r~~~~eil~Hp  340 (437)
T 4aw2_A          323 SREHRLGQNGIEDFKKHP  340 (437)
T ss_dssp             CGGGCTTTTTTHHHHTSG
T ss_pred             ccccccCCCCHHHHhCCC
Confidence            88888  99999998753

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.95  E-value=8.7e-29  Score=229.91  Aligned_cols=165  Identities=21%  Similarity=0.327  Sum_probs=122.2

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..+..++.  ||+  .||.|||++|+ +||||||+||+++.++.+||+|||++........ ........||+.|+||
T Consensus       131 ~~~~~~~i~~--~i~--~~l~~lH~~~i-~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~g~~~y~aP  204 (307)
T 2nru_A          131 SWHMRCKIAQ--GAA--NGINFLHENHH-IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-TVMTSRIVGTTAYMAP  204 (307)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS-CEECSSCCSCGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHhcCCe-ecCCCCHHHEEEcCCCcEEEeecccccccccccc-cccccccCCCcCcCCh
Confidence            3333444455  777  99999999999 9999999999999999999999999876543221 1122345789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC------C----CCCCCCcccccCCChHHHHHH
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC------E----EPFRPNLELLRDSCEPFVLAC  276 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~l~~l  276 (413)
                      |++.+. +    +.++||||||+++|+|++|..||.............      .    ....+.....+..+++.+.++
T Consensus       205 E~~~~~-~----~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  279 (307)
T 2nru_A          205 EALRGE-I----TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSV  279 (307)
T ss_dssp             HHHTTE-E----CTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHH
T ss_pred             HHhcCC-C----CccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHH
Confidence            998764 3    889999999999999999999997654322111000      0    000111111223456789999


Q ss_pred             HHHHhccCCCCCCChhHHHHHHHhhc
Q psy16840        277 MRDCWAEAPESRPDFPTIRARLKHMK  302 (413)
Q Consensus       277 i~~cl~~~P~~Rps~~~i~~~l~~~~  302 (413)
                      +.+||+.||.+|||+.++++.|+.+.
T Consensus       280 i~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          280 ASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            99999999999999999999998874

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.95  E-value=1.2e-29  Score=240.03  Aligned_cols=144  Identities=17%  Similarity=0.254  Sum_probs=109.9

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....   .......+||+.|+|||++.
T Consensus       126 ~~~~~~--qi~--~aL~~LH~~gi-vHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~---~~~~~~~~gt~~y~aPE~~~  197 (353)
T 3txo_A          126 ARFYAA--EII--SALMFLHDKGI-IYRDLKLDNVLLDHEGHCKLADFGMCKEGICN---GVTTATFCGTPDYIAPEILQ  197 (353)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCCTTCBCSCC------------CCGGGCCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHHCCC-cccCCCHHHEEECCCCCEEEccccceeecccC---CccccccCCCcCeEChhhcC
Confidence            334444  788  99999999999 99999999999999999999999998753222   12234568999999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +..+    +.++|||||||++|||++|..||.+.+.......+.....     .++..+++.+.++|.+||..||.+||+
T Consensus       198 ~~~~----~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~~~~~~~li~~lL~~dP~~R~~  268 (353)
T 3txo_A          198 EMLY----GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV-----VYPTWLHEDATGILKSFMTKNPTMRLG  268 (353)
T ss_dssp             HHHC----TTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----CCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred             CCCc----CCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-----CCCCCCCHHHHHHHHHHhhhCHHHccC
Confidence            8776    8999999999999999999999987543222111111111     123467889999999999999999999


Q ss_pred             h
Q psy16840        291 F  291 (413)
Q Consensus       291 ~  291 (413)
                      +
T Consensus       269 ~  269 (353)
T 3txo_A          269 S  269 (353)
T ss_dssp             S
T ss_pred             C
Confidence            8

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.95  E-value=2.3e-29  Score=231.01  Aligned_cols=160  Identities=24%  Similarity=0.405  Sum_probs=122.8

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  |++  .||.|||++|+ +||||||+|||++.++.+||+|||++.........  ......+|+.|+|||+
T Consensus       120 ~~~~~i~~--qi~--~~l~~lH~~~i-~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~  192 (283)
T 3gen_A          120 QQLLEMCK--DVC--EAMEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT--SSVGSKFPVRWSPPEV  192 (283)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTC-CCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH--STTSTTSCGGGCCHHH
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCc-cCCCCccceEEEcCCCCEEEccccccccccccccc--cccCCccCcccCCHHH
Confidence            33444455  777  99999999999 99999999999999999999999999765432211  1223456788999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      +.+..+    +.++||||||+++|+|++ |..||.............. ..++.   .+..+++.+.+++.+||+.||.+
T Consensus       193 ~~~~~~----~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~l~~li~~~l~~~p~~  264 (283)
T 3gen_A          193 LMYSKF----SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-GLRLY---RPHLASEKVYTIMYSCWHEKADE  264 (283)
T ss_dssp             HHHCCC----SHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT-TCCCC---CCTTCCHHHHHHHHHTTCSSGGG
T ss_pred             hccCCC----CchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhc-ccCCC---CCCcCCHHHHHHHHHHccCChhH
Confidence            987776    899999999999999998 9999976442221111111 11111   12457889999999999999999


Q ss_pred             CCChhHHHHHHHhhcc
Q psy16840        288 RPDFPTIRARLKHMKD  303 (413)
Q Consensus       288 Rps~~~i~~~l~~~~~  303 (413)
                      |||+.++++.|+.+..
T Consensus       265 Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          265 RPTFKILLSNILDVMD  280 (283)
T ss_dssp             SCCHHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHhh
Confidence            9999999999987754

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.4e-29  Score=236.89  Aligned_cols=159  Identities=11%  Similarity=0.135  Sum_probs=122.0

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC--CeEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS--RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+|||++.  ++.+||+|||++.......    ......||+.|+
T Consensus       100 ~~~~~~~i~~--qi~--~al~~lH~~gi-vH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~  170 (321)
T 1tki_A          100 NEREIVSYVH--QVC--EALQFLHSHNI-GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----NFRLLFTAPEYY  170 (321)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC----EEEEEESCGGGS
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCC-CcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC----ccccccCChhhc
Confidence            3344445555  788  99999999999 99999999999987  7899999999997653221    123457899999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      |||++.+..+    +.++|||||||++|+|++|..||.+.+.......+........ ......+++++.+++.+||..|
T Consensus       171 aPE~~~~~~~----~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~d  245 (321)
T 1tki_A          171 APEVHQHDVV----STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD-EEAFKEISIEAMDFVDRLLVKE  245 (321)
T ss_dssp             CHHHHTTCEE----CHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC-HHHHTTSCHHHHHHHHTTSCSS
T ss_pred             CcHHhcCCCC----CchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCC-hhhhccCCHHHHHHHHHHcCCC
Confidence            9999988766    8999999999999999999999976442221111111111111 1122568899999999999999


Q ss_pred             CCCCCChhHHHHHHH
Q psy16840        285 PESRPDFPTIRARLK  299 (413)
Q Consensus       285 P~~Rps~~~i~~~l~  299 (413)
                      |.+|||+.+++++..
T Consensus       246 p~~Rpt~~e~l~hp~  260 (321)
T 1tki_A          246 RKSRMTASEALQHPW  260 (321)
T ss_dssp             GGGSCCHHHHHHSHH
T ss_pred             hhHCcCHHHHhcChh
Confidence            999999999998654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.95  E-value=2.4e-29  Score=246.63  Aligned_cols=160  Identities=20%  Similarity=0.278  Sum_probs=113.8

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +....+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....    ......+||+.|+|
T Consensus       161 l~~~~~~~~~~--qil--~aL~~lH~~~i-iHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~----~~~~~~~gt~~y~a  231 (464)
T 3ttj_A          161 LDHERMSYLLY--QML--CGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----FMMTPYVVTRYYRA  231 (464)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTSCEEECCCCCC-----C----CCC----CCCTTCC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCc-ccCCCChHhEEEeCCCCEEEEEEEeeeecCCC----cccCCCcccccccC
Confidence            33444445555  888  99999999999 99999999999999999999999999765322    12345678999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-----------------------CCC--CCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC-----------------------EEP--FRP  260 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~-----------------------~~~--~~~  260 (413)
                      ||++.+..+    +.++|||||||++|||++|+.||.+.+.......+.                       ..+  ...
T Consensus       232 PE~~~~~~~----~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~  307 (464)
T 3ttj_A          232 PEVILGMGY----KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL  307 (464)
T ss_dssp             HHHHTTCCC----CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCC
T ss_pred             HHHHcCCCC----CHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCC
Confidence            999988776    899999999999999999999998754111000000                       000  000


Q ss_pred             Cccc-cc-----------CCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        261 NLEL-LR-----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       261 ~~~~-~~-----------~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ..+. ++           ...++++.+|+.+||..||.+|||+++++++.
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp  357 (464)
T 3ttj_A          308 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP  357 (464)
T ss_dssp             CHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred             ChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence            0000 00           11267899999999999999999999998764

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.95  E-value=2.5e-29  Score=235.55  Aligned_cols=157  Identities=17%  Similarity=0.217  Sum_probs=111.8

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.......   .......||+.|+|||++.
T Consensus       102 ~~~~~~--qi~--~aL~~LH~~~i-vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~t~~y~aPE~~~  173 (324)
T 3mtl_A          102 VKLFLF--QLL--RGLAYCHRQKV-LHRDLKPQNLLINERGELKLADFGLARAKSIPT---KTYDNEVVTLWYRPPDILL  173 (324)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTE-EESSCCGGGEEECTTCCEEECSSSEEECC---------------CGGGCCHHHHT
T ss_pred             HHHHHH--HHH--HHHHHHHHCCc-cCCCcCHHHEEECCCCCEEEccCcccccccCCc---cccccccCcccccChhhhc
Confidence            334444  777  99999999999 999999999999999999999999987643221   1123446799999999987


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-----------CCC--------------CCCCCCCcccc
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----------EDC--------------EEPFRPNLELL  265 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-----------~~~--------------~~~~~~~~~~~  265 (413)
                      +...   ++.++|||||||++|+|++|..||.+.+..+...           ...              ...........
T Consensus       174 ~~~~---~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (324)
T 3mtl_A          174 GSTD---YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSH  250 (324)
T ss_dssp             TCCC---CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHH
T ss_pred             CCCC---CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhh
Confidence            6432   2899999999999999999999997654211000           000              00000111112


Q ss_pred             cCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        266 RDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       266 ~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ...+++++.+|+.+||+.||.+|||+.++++..
T Consensus       251 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp  283 (324)
T 3mtl_A          251 APRLDSDGADLLTKLLQFEGRNRISAEDAMKHP  283 (324)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred             cCCCCHHHHHHHHHHcCcCcccCCCHHHHhcCh
Confidence            246788999999999999999999999998753

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.95  E-value=4.5e-29  Score=236.05  Aligned_cols=143  Identities=21%  Similarity=0.281  Sum_probs=113.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++.....   .......+||+.|+|||++.+..+    
T Consensus       129 qi~--~aL~~LH~~gi-vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~----  198 (353)
T 2i0e_A          129 EIA--IGLFFLQSKGI-IYRDLKLDNVMLDSEGHIKIADFGMCKENIWD---GVTTKTFCGTPDYIAPEIIAYQPY----  198 (353)
T ss_dssp             HHH--HHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCCTTCBCCCCT---TCCBCCCCSCGGGCCHHHHTTCCB----
T ss_pred             HHH--HHHHHHHHCCE-EeccCCHHHEEEcCCCcEEEEeCCcccccccC---CcccccccCCccccChhhhcCCCc----
Confidence            777  99999999999 99999999999999999999999998753221   122345689999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh-----hH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF-----PT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~-----~~  293 (413)
                      +.++|||||||++|||++|..||.+.+.......+.....     .++..+++++.++|.+||..||.+||++     .+
T Consensus       199 ~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~  273 (353)
T 2i0e_A          199 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV-----AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERD  273 (353)
T ss_dssp             STHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHH
T ss_pred             CCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC-----CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHH
Confidence            8999999999999999999999986542221111111111     1235688999999999999999999964     55


Q ss_pred             HHH
Q psy16840        294 IRA  296 (413)
Q Consensus       294 i~~  296 (413)
                      +++
T Consensus       274 i~~  276 (353)
T 2i0e_A          274 IKE  276 (353)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            554

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.95  E-value=2.3e-29  Score=237.37  Aligned_cols=143  Identities=22%  Similarity=0.310  Sum_probs=114.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....   .......+||+.|+|||++.+..+    
T Consensus       126 qi~--~aL~~LH~~~i-vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~----  195 (345)
T 1xjd_A          126 EII--LGLQFLHSKGI-VYRDLKLDNILLDKDGHIKIADFGMCKENMLG---DAKTNTFCGTPDYIAPEILLGQKY----  195 (345)
T ss_dssp             HHH--HHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCCTTCBCCCCT---TCCBCCCCSCGGGCCHHHHTTCCB----
T ss_pred             HHH--HHHHHHHHCCe-EeCCCChhhEEECCCCCEEEeEChhhhhcccC---CCcccCCCCCcccCChhhhcCCCC----
Confidence            777  99999999999 99999999999999999999999998754221   112345689999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh-HHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP-TIRA  296 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~-~i~~  296 (413)
                      +.++|||||||++|||++|..||.+.+.......+....  +   .++..+++++.++|.+||..||.+||++. ++++
T Consensus       196 ~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~--~---~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~  269 (345)
T 1xjd_A          196 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN--P---FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  269 (345)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--C---CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             CChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCC--C---CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence            999999999999999999999997654221111111111  1   12356889999999999999999999997 6654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.95  E-value=7.2e-29  Score=225.97  Aligned_cols=157  Identities=26%  Similarity=0.381  Sum_probs=119.9

Q ss_pred             hHhhhccccCCchHHhhHhhhcCC--CcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSP--IGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~--iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      .+..++.  ||+  .||+|||+++  + +||||||+|||++.++.++|+|||++....        .....||+.|+|||
T Consensus       112 ~~~~i~~--qi~--~~l~~lH~~~~~i-~H~dikp~Nil~~~~~~~~l~~~~~~~~~~--------~~~~~~t~~y~aPE  178 (271)
T 3kmu_A          112 QAVKFAL--DMA--RGMAFLHTLEPLI-PRHALNSRSVMIDEDMTARISMADVKFSFQ--------SPGRMYAPAWVAPE  178 (271)
T ss_dssp             HHHHHHH--HHH--HHHHHHTTSSSCC-TTCCCSGGGEEECTTSCEEEEGGGSCCTTS--------CTTCBSCGGGSCHH
T ss_pred             HHHHHHH--HHH--HHHHHHhcCCCce-ecCCCccceEEEcCCcceeEEeccceeeec--------ccCccCCccccChh
Confidence            3344444  666  9999999998  8 999999999999999999999998864321        22346799999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      ++.+.... .++.++||||||+++|+|++|..||.+...............++.   .+..+++.+.+++.+||+.||.+
T Consensus       179 ~~~~~~~~-~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~  254 (271)
T 3kmu_A          179 ALQKKPED-TNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPT---IPPGISPHVSKLMKICMNEDPAK  254 (271)
T ss_dssp             HHHSCGGG-SCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             hhccCCCC-CCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHcCCChhh
Confidence            99876541 114489999999999999999999976442221111111122222   23578899999999999999999


Q ss_pred             CCChhHHHHHHHhhcc
Q psy16840        288 RPDFPTIRARLKHMKD  303 (413)
Q Consensus       288 Rps~~~i~~~l~~~~~  303 (413)
                      |||+.++++.|+.+.+
T Consensus       255 Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          255 RPKFDMIVPILEKMQD  270 (271)
T ss_dssp             SCCHHHHHHHHHHHCC
T ss_pred             CcCHHHHHHHHHHhhc
Confidence            9999999999988754

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.95  E-value=3.9e-29  Score=234.50  Aligned_cols=164  Identities=26%  Similarity=0.415  Sum_probs=123.8

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++......    ......+++.|+|
T Consensus       139 ~~~~~~~~i~~--qi~--~aL~~LH~~~i-vH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~----~~~~~~~~~~y~a  209 (327)
T 1fvr_A          139 LSSQQLLHFAA--DVA--RGMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYV----KKTMGRLPVRWMA  209 (327)
T ss_dssp             SCHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECGGGCEEECCTTCEESSCEEC----CC----CCTTTCC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHhCCc-cCCCCccceEEEcCCCeEEEcccCcCccccccc----cccCCCCCccccC
Confidence            34444445555  777  99999999999 999999999999999999999999987432211    1223356788999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++.+..+    +.++||||||+++|+|++ |..||.+........... ...++.   .+..+++.+.+++.+||+.|
T Consensus       210 PE~~~~~~~----~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~-~~~~~~---~~~~~~~~l~~li~~~l~~d  281 (327)
T 1fvr_A          210 IESLNYSVY----TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-QGYRLE---KPLNCDDEVYDLMRQCWREK  281 (327)
T ss_dssp             HHHHHHCEE----CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGG-GTCCCC---CCTTBCHHHHHHHHHHTCSS
T ss_pred             hhhhccccC----CchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhh-cCCCCC---CCCCCCHHHHHHHHHHccCC
Confidence            999987766    899999999999999998 999997654222111111 111111   23567899999999999999


Q ss_pred             CCCCCChhHHHHHHHhhcccCc
Q psy16840        285 PESRPDFPTIRARLKHMKDGKQ  306 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~~~~~  306 (413)
                      |.+|||+.++++.|+.+.....
T Consensus       282 p~~Rps~~ell~~L~~~~~~~~  303 (327)
T 1fvr_A          282 PYERPSFAQILVSLNRMLEERK  303 (327)
T ss_dssp             GGGSCCHHHHHHHHHHHHHSSS
T ss_pred             hhhCcCHHHHHHHHHHHHHhhc
Confidence            9999999999999998766543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.95  E-value=1.1e-28  Score=239.90  Aligned_cols=156  Identities=19%  Similarity=0.255  Sum_probs=116.2

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeE--EEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWV--LQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~--~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ..+..++.  ||+  .||+|||++++ +||||||+|||++.++.  +||+|||++.....      ......||+.|+||
T Consensus       200 ~~~~~i~~--qi~--~aL~~LH~~~i-vHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~------~~~~~~gt~~y~aP  268 (429)
T 3kvw_A          200 PLVRKFAH--SIL--QCLDALHKNRI-IHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ------RVYTYIQSRFYRAP  268 (429)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHHTE-ECSCCSGGGEEESSTTSCCEEECCCTTCEETTC------CCCSSCSCGGGCCH
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCe-ecCCCCHHHeEEccCCCcceEEeecccceecCC------cccccCCCCCccCh
Confidence            33444555  777  99999999999 99999999999999876  99999999865422      12345789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC----------------------CCCC--------
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE----------------------DCEE--------  256 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~----------------------~~~~--------  256 (413)
                      |++.+..+    +.++|||||||++|||++|..||.+....+....                      ....        
T Consensus       269 E~~~~~~~----~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (429)
T 3kvw_A          269 EVILGARY----GMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTV  344 (429)
T ss_dssp             HHHHTBCC----CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCE
T ss_pred             HHHhCCCC----CchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccc
Confidence            99998876    9999999999999999999999976431100000                      0000        


Q ss_pred             ------------------------CCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHH
Q psy16840        257 ------------------------PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK  299 (413)
Q Consensus       257 ------------------------~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~  299 (413)
                                              ..+.....++...++.+.+||.+||+.||.+|||+.+++++..
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw  411 (429)
T 3kvw_A          345 TTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPW  411 (429)
T ss_dssp             ECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTT
T ss_pred             cccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChh
Confidence                                    0000001122345788999999999999999999999987543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.95  E-value=6.6e-29  Score=232.31  Aligned_cols=160  Identities=24%  Similarity=0.423  Sum_probs=122.9

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++........ .......+|+.|+|||++.
T Consensus       140 ~~~i~~--qi~--~~l~~lH~~~i-~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  213 (322)
T 1p4o_A          140 MIQMAG--EIA--DGMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWMSPESLK  213 (322)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-BCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCE-EGGGSSEECGGGCCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHHCCC-ccCCCccceEEEcCCCeEEECcCcccccccccccc-ccccCCCCCCCccChhhhc
Confidence            344444  777  99999999999 99999999999999999999999998765432211 1123345688999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++||||||+++|+|++ |..||.+...............    ...+..+++.+.+++.+||+.||.+||
T Consensus       214 ~~~~----~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~~l~~dp~~Rp  285 (322)
T 1p4o_A          214 DGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL----LDKPDNCPDMLFELMRMCWQYNPKMRP  285 (322)
T ss_dssp             HCCC----CHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCC----CCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCC----CchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCc----CCCCCCCCHHHHHHHHHHcCCCcccCc
Confidence            8776    899999999999999999 8999976432211111111111    112357889999999999999999999


Q ss_pred             ChhHHHHHHHhhccc
Q psy16840        290 DFPTIRARLKHMKDG  304 (413)
Q Consensus       290 s~~~i~~~l~~~~~~  304 (413)
                      |+.++++.|+.+...
T Consensus       286 s~~e~l~~L~~~~~~  300 (322)
T 1p4o_A          286 SFLEIISSIKEEMEP  300 (322)
T ss_dssp             CHHHHHHHHGGGSCT
T ss_pred             CHHHHHHHHHHhhcc
Confidence            999999999887553

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.95  E-value=4.2e-28  Score=238.06  Aligned_cols=163  Identities=21%  Similarity=0.301  Sum_probs=112.3

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC---------------
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS---------------  191 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~---------------  191 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.........               
T Consensus       154 ~~~~~~~~~~--qi~--~aL~~LH~~~i-iHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~  228 (458)
T 3rp9_A          154 TELHIKTLLY--NLL--VGVKYVHSAGI-LHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLV  228 (458)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-BCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC-----------
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCc-CCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccc
Confidence            3334445555  888  99999999999 999999999999999999999999998754221110               


Q ss_pred             ---------cccccccCcccccCccccc-CCCCCCCCCccchhHHHHHHHHHHHh-----------CCCCCCCCCCCCCC
Q psy16840        192 ---------IGEHQYYRSLLWKAPELLR-DTHAPIRGTQKADVYAFAVILHEIIG-----------RRGPFGGCGLYEPK  250 (413)
Q Consensus       192 ---------~~~~~~~gt~~y~aPE~~~-~~~~~~~~~~~~Dv~slG~il~el~~-----------g~~pf~~~~~~~~~  250 (413)
                               ......+||+.|+|||++. +..+    +.++|||||||++|||++           |.++|.+.+.....
T Consensus       229 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~----~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~  304 (458)
T 3rp9_A          229 TFPHTKNLKRQLTGHVVTRWYRAPELILLQENY----TEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLS  304 (458)
T ss_dssp             ----------------CCCTTCCHHHHTTCCCC----CTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------
T ss_pred             cccccccccccccCCcccccccChHHhhCCCCC----CcHhHHHHHHHHHHHHHHhccccccccccccccCCCCcccccc
Confidence                     1223457899999999864 4444    999999999999999999           56666554321100


Q ss_pred             CC----------------------------------------------CCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        251 GE----------------------------------------------DCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       251 ~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ..                                              ..............+.+++++.+||.+||..|
T Consensus       305 ~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~d  384 (458)
T 3rp9_A          305 PDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFN  384 (458)
T ss_dssp             ------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSS
T ss_pred             ccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccC
Confidence            00                                              00000111112222456899999999999999


Q ss_pred             CCCCCChhHHHHHH
Q psy16840        285 PESRPDFPTIRARL  298 (413)
Q Consensus       285 P~~Rps~~~i~~~l  298 (413)
                      |.+|||+++++++-
T Consensus       385 P~~R~t~~e~L~Hp  398 (458)
T 3rp9_A          385 PNKRITINECLAHP  398 (458)
T ss_dssp             TTTSCCHHHHHHSG
T ss_pred             ccccCCHHHHhcCH
Confidence            99999999999863

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.95  E-value=1.1e-28  Score=225.96  Aligned_cols=148  Identities=29%  Similarity=0.532  Sum_probs=113.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      |++  .||.|||++|+ +||||||+||+++.++.+||+|||++......      .....+++.|+|||++.+..+    
T Consensus       125 ~i~--~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~----  191 (278)
T 1byg_A          125 DVC--EAMEYLEGNNF-VHRDLAARNVLVSEDNVAKVSDFGLTKEASST------QDTGKLPVKWTAPEALREKKF----  191 (278)
T ss_dssp             HHH--HHHHHHHHTTC-CCSCCSGGGEEECTTSCEEECCCCC------------------CCTTTSCHHHHHHCCC----
T ss_pred             HHH--HHHHHHHhCCc-cccCCCcceEEEeCCCcEEEeecccccccccc------ccCCCccccccCHHHhCCCCC----
Confidence            777  99999999999 99999999999999999999999998754322      122356888999999987766    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++||||||+++|+|++ |..||............. ...++   ..+..+++.+.+++.+||+.||.+|||+.++++.
T Consensus       192 ~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  267 (278)
T 1byg_A          192 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKM---DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ  267 (278)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT-TTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-cCCCC---CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHH
Confidence            899999999999999998 999997654322111111 11112   1235788999999999999999999999999999


Q ss_pred             HHhhcc
Q psy16840        298 LKHMKD  303 (413)
Q Consensus       298 l~~~~~  303 (413)
                      |+.+..
T Consensus       268 L~~i~~  273 (278)
T 1byg_A          268 LEHIKT  273 (278)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            988754

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.95  E-value=1.6e-28  Score=233.75  Aligned_cols=160  Identities=19%  Similarity=0.326  Sum_probs=120.9

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++.................||+.|+|||++.
T Consensus       130 ~~~i~~--qi~--~aL~~LH~~~i-vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  204 (364)
T 3qyz_A          130 ICYFLY--QIL--RGLKYIHSANV-LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML  204 (364)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHHCCe-ecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhc
Confidence            334445  777  99999999999 9999999999999999999999999987654433332234568999999999876


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC--------------------------CCCCCCCCccc
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED--------------------------CEEPFRPNLEL  264 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~--------------------------~~~~~~~~~~~  264 (413)
                      +...   ++.++|||||||++|+|++|..||.+.........+                          ...........
T Consensus       205 ~~~~---~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (364)
T 3qyz_A          205 NSKG---YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR  281 (364)
T ss_dssp             TBCS---CSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHH
T ss_pred             CCCC---CCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHH
Confidence            5442   289999999999999999999999775422211100                          00011111222


Q ss_pred             ccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        265 LRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ....+++++.+||.+||+.||.+|||+.+++++.
T Consensus       282 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp  315 (364)
T 3qyz_A          282 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP  315 (364)
T ss_dssp             HCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred             hCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence            3356789999999999999999999999998754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=4.8e-29  Score=226.82  Aligned_cols=158  Identities=24%  Similarity=0.457  Sum_probs=121.2

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||.|||++|+ +||||||+||+++.++.+||+|||++........  .......+++.|+|||++.
T Consensus       106 ~~~~~~--~i~--~~l~~lH~~~i-~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  178 (267)
T 3t9t_A          106 LLGMCL--DVC--EGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--TSSTGTKFPVKWASPEVFS  178 (267)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH--HSTTSTTCCGGGCCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHhCCc-ccCCCchheEEECCCCCEEEcccccccccccccc--cccccccccccccChhhhc
Confidence            334444  777  99999999999 9999999999999999999999999876533211  1122345678899999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++||||||+++|+|++ |..||.+........... ...++.   .+..+++.+.+++.+||+.||.+||
T Consensus       179 ~~~~----~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~-~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rp  250 (267)
T 3t9t_A          179 FSRY----SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLY---KPRLASTHVYQIMNHCWRERPEDRP  250 (267)
T ss_dssp             HCCC----CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             CCCc----cchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHh-cCCcCC---CCccCcHHHHHHHHHHccCChhhCc
Confidence            7766    899999999999999999 899997643221111111 111111   1245788999999999999999999


Q ss_pred             ChhHHHHHHHhhcc
Q psy16840        290 DFPTIRARLKHMKD  303 (413)
Q Consensus       290 s~~~i~~~l~~~~~  303 (413)
                      |+.++++.|+.+..
T Consensus       251 s~~~ll~~L~~l~~  264 (267)
T 3t9t_A          251 AFSRLLRQLAEIAE  264 (267)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHh
Confidence            99999999988754

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.95  E-value=5.2e-29  Score=236.78  Aligned_cols=157  Identities=18%  Similarity=0.195  Sum_probs=118.4

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC---eEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      ..+..++.  ||+  .||.|||++|+ +||||||+|||++.+   +.+||+|||++.......    ......||+.|+|
T Consensus       128 ~~~~~~~~--qi~--~al~~lH~~~i-vH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~----~~~~~~gt~~y~a  198 (362)
T 2bdw_A          128 ADASHCIQ--QIL--ESIAYCHSNGI-VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----AWHGFAGTPGYLS  198 (362)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTC-BCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC----SCCCSCSCTTTCC
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCe-EeccCchHHEEEecCCCCCCEEEeecCcceEecCCc----ccccCCCCccccC
Confidence            33444555  788  99999999999 999999999999864   469999999987654221    1234578999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      ||++.+..+    +.++|||||||++|+|++|..||.+.........+.........+ ....+++++.++|.+||..||
T Consensus       199 PE~~~~~~~----~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP  273 (362)
T 2bdw_A          199 PEVLKKDPY----SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP-EWDTVTPEAKSLIDSMLTVNP  273 (362)
T ss_dssp             HHHHTTCCC----CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT-GGGGSCHHHHHHHHHHSCSSG
T ss_pred             HHHHccCCC----CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcc-cccCCCHHHHHHHHHHcCCCh
Confidence            999988766    899999999999999999999997644211111111111111111 124678999999999999999


Q ss_pred             CCCCChhHHHHHHH
Q psy16840        286 ESRPDFPTIRARLK  299 (413)
Q Consensus       286 ~~Rps~~~i~~~l~  299 (413)
                      .+|||+.+++++..
T Consensus       274 ~~R~t~~e~l~hp~  287 (362)
T 2bdw_A          274 KKRITADQALKVPW  287 (362)
T ss_dssp             GGSCCHHHHTTSHH
T ss_pred             hhCcCHHHHhcCcc
Confidence            99999999987643

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.95  E-value=8.7e-29  Score=235.76  Aligned_cols=142  Identities=18%  Similarity=0.191  Sum_probs=113.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....   .......+||+.|+|||++.+..+    
T Consensus       147 qi~--~aL~~LH~~gi-vHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~----  216 (373)
T 2r5t_A          147 EIA--SALGYLHSLNI-VYRDLKPENILLDSQGHIVLTDFGLCKENIEH---NSTTSTFCGTPEYLAPEVLHKQPY----  216 (373)
T ss_dssp             HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTSCEEECCCCBCGGGBCC---CCCCCSBSCCCCCCCHHHHTTCCC----
T ss_pred             HHH--HHHHHHHHCCc-eecCCCHHHEEECCCCCEEEeeCccccccccC---CCccccccCCccccCHHHhCCCCC----
Confidence            777  99999999999 99999999999999999999999998753221   112345689999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                      +.++|||||||++|||++|..||.+.+.......+.....     .++..+++.+.++|.+||+.||.+||++.+.+
T Consensus       217 ~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-----~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~  288 (373)
T 2r5t_A          217 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL-----QLKPNITNSARHLLEGLLQKDRTKRLGAKDDF  288 (373)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCC-----CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred             CchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc-----CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence            8999999999999999999999976542221111111111     12356889999999999999999999986433

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.95  E-value=3.7e-28  Score=235.53  Aligned_cols=159  Identities=22%  Similarity=0.300  Sum_probs=118.0

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-eEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      +....+..++.  ||+  .||.|||++|+ +||||||+|||++.+ +.+||+|||+++......    ......||+.|+
T Consensus       153 l~~~~~~~~~~--qi~--~aL~~LH~~~i-vHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~----~~~~~~~t~~y~  223 (420)
T 1j1b_A          153 LPVIYVKLYMY--QLF--RSLAYIHSFGI-CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYR  223 (420)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHTTTE-ECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC----CCCSCCSCTTSC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCc-cccCCChhhEEEeCCCCeEEeccchhhhhcccCC----CceeeeeCCCcC
Confidence            33344455555  888  99999999999 999999999999954 689999999998653322    123457899999


Q ss_pred             CcccccCC-CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC---------------------CCC---CCCC
Q psy16840        205 APELLRDT-HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE---------------------DCE---EPFR  259 (413)
Q Consensus       205 aPE~~~~~-~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~---------------------~~~---~~~~  259 (413)
                      |||++.+. .+    +.++|||||||++|||++|+.||.+.+..+....                     ...   ....
T Consensus       224 aPE~~~~~~~~----~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~  299 (420)
T 1j1b_A          224 APELIFGATDY----TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH  299 (420)
T ss_dssp             CHHHHTTCSSC----CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCC
T ss_pred             CHHHHcCCCCC----CchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCC
Confidence            99998765 34    8999999999999999999999987542110000                     000   0000


Q ss_pred             CCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       260 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +....++..+++++.+||.+||..||.+|||+.+++++
T Consensus       300 ~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          300 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             CHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence            11111235678999999999999999999999999865

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.95  E-value=1.9e-28  Score=229.76  Aligned_cols=159  Identities=16%  Similarity=0.232  Sum_probs=98.9

Q ss_pred             hHhhhccccCCchHHhhHhhhcC-CCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRS-PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~-~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      .+..++.  |++  .||.|||++ |+ +||||||+|||++.++.+||+|||+++......    ......||+.|+|||+
T Consensus       126 ~~~~i~~--~i~--~~l~~lH~~~~i-vH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~----~~~~~~gt~~y~aPE~  196 (327)
T 3aln_A          126 ILGKITL--ATV--KALNHLKENLKI-IHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI----AKTRDAGCRPYMAPER  196 (327)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHHHSC-CCSCCCGGGEEEETTTEEEECCCSSSCC-------------------------
T ss_pred             HHHHHHH--HHH--HHHHHHhccCCE-eECCCCHHHEEEcCCCCEEEccCCCceeccccc----ccccCCCCccccCcee
Confidence            3344444  777  999999998 99 999999999999999999999999987653321    1223468999999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcc-cccCCChHHHHHHHHHHhccCCCC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE-LLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      +........++.++||||||+++|+|++|..||.+................+... .....+++.+.+++.+||+.||.+
T Consensus       197 ~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  276 (327)
T 3aln_A          197 IDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESK  276 (327)
T ss_dssp             ---------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGG
T ss_pred             eccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhh
Confidence            8432211123899999999999999999999997643221111111111112111 122468899999999999999999


Q ss_pred             CCChhHHHHH
Q psy16840        288 RPDFPTIRAR  297 (413)
Q Consensus       288 Rps~~~i~~~  297 (413)
                      |||+.++++.
T Consensus       277 Rps~~ell~h  286 (327)
T 3aln_A          277 RPKYKELLKH  286 (327)
T ss_dssp             SCCHHHHTTS
T ss_pred             CcCHHHHHhC
Confidence            9999999764

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.95  E-value=8.4e-29  Score=232.96  Aligned_cols=163  Identities=26%  Similarity=0.388  Sum_probs=124.3

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++........ ........+|+.|+||
T Consensus       155 ~~~~~~~i~~--qi~--~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aP  228 (334)
T 2pvf_A          155 TFKDLVSCTY--QLA--RGMEYLASQKC-IHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YKKTTNGRLPVKWMAP  228 (334)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCCTTCEECTTTSS-EECCSCCCCCGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCe-eCCCCccceEEEcCCCCEEEcccccccccccccc-ccccCCCCcccceeCh
Confidence            3344445555  777  99999999999 9999999999999999999999999876543221 1112334567899999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |++.+..+    +.++||||||+++|+|++ |..||.+.......... ....++   ..+..+++.+.+++.+||+.||
T Consensus       229 E~~~~~~~----~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~l~~li~~~l~~dp  300 (334)
T 2pvf_A          229 EALFDRVY----THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHRM---DKPANCTNELYMMMRDCWHAVP  300 (334)
T ss_dssp             HHHHHCEE----CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-HHTCCC---CCCTTCCHHHHHHHHHHTCSSG
T ss_pred             HHhcCCCc----ChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHH-hcCCCC---CCCccCCHHHHHHHHHHccCCh
Confidence            99987766    899999999999999999 99999764422111100 001111   1235688999999999999999


Q ss_pred             CCCCChhHHHHHHHhhcc
Q psy16840        286 ESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~~  303 (413)
                      .+|||+.++++.|+.+..
T Consensus       301 ~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          301 SQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             GGSCCHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHh
Confidence            999999999999988754

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.95  E-value=5.2e-28  Score=223.13  Aligned_cols=159  Identities=14%  Similarity=0.143  Sum_probs=115.8

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||
T Consensus       100 ~~~~~~~~~--ql~--~~l~~lH~~~i-vH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~t~~y~aPE  171 (292)
T 3o0g_A          100 PEIVKSFLF--QLL--KGLGFCHSRNV-LHRDLKPQNLLINRNGELKLANFGLARAFGIPV---RCYSAEVVTLWYRPPD  171 (292)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECCSCC---SCCCSCCSCGGGCCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEeecccceecCCcc---ccccCCccccCCcChH
Confidence            333444555  777  99999999999 999999999999999999999999997653221   1223457899999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC----------------CCC---C------CCCCCCCCCc
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE----------------PKG---E------DCEEPFRPNL  262 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~----------------~~~---~------~~~~~~~~~~  262 (413)
                      ++.+...   ++.++|||||||++|+|++|..||.......                ...   .      ..........
T Consensus       172 ~~~~~~~---~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (292)
T 3o0g_A          172 VLFGAKL---YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSL  248 (292)
T ss_dssp             HHTTCSC---CCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCC
T ss_pred             HHcCCCC---cCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcch
Confidence            9977652   2899999999999999999888853221100                000   0      0000001111


Q ss_pred             ccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ....+.+++.+.+|+.+||+.||.+|||+++++++
T Consensus       249 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          249 VNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            12234678999999999999999999999999864

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.95  E-value=2.7e-28  Score=223.28  Aligned_cols=152  Identities=16%  Similarity=0.236  Sum_probs=99.0

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  |++  .||.|||++|+ +||||||+||+++.++.+||+|||++........   ......||+.|+|||.
T Consensus       112 ~~~~~~~~--qi~--~~l~~lH~~~i-~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~  183 (278)
T 3cok_A          112 NEARHFMH--QII--TGMLYLHSHGI-LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE---KHYTLCGTPNYISPEI  183 (278)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTE-ECSSCCGGGEEECTTCCEEECCCTTCEECC-----------------------
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCe-ecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC---cceeccCCCCcCCcch
Confidence            33444455  777  99999999999 9999999999999999999999999876532221   1234568999999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      +.+..+    +.++||||||+++|+|++|..||.................     ..+..+++++.+++.+||+.||.+|
T Consensus       184 ~~~~~~----~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~dp~~R  254 (278)
T 3cok_A          184 ATRSAH----GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY-----EMPSFLSIEAKDLIHQLLRRNPADR  254 (278)
T ss_dssp             ------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCC-----CCCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             hcCCCC----CchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhccc-----CCccccCHHHHHHHHHHcccCHhhC
Confidence            988766    8999999999999999999999987553332222211111     1235678999999999999999999


Q ss_pred             CChhHHHHH
Q psy16840        289 PDFPTIRAR  297 (413)
Q Consensus       289 ps~~~i~~~  297 (413)
                      ||+.++++.
T Consensus       255 ps~~~~l~h  263 (278)
T 3cok_A          255 LSLSSVLDH  263 (278)
T ss_dssp             CCHHHHTTS
T ss_pred             CCHHHHhcC
Confidence            999999864

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.95  E-value=1.5e-28  Score=227.94  Aligned_cols=162  Identities=16%  Similarity=0.290  Sum_probs=123.4

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  ||+  .||.|||++|+ +||||||+||+++.++.+||+|||++.......   .......||+.|+|||
T Consensus       118 ~~~~~~~~~--qi~--~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE  189 (303)
T 3a7i_A          118 ETQIATILR--EIL--KGLDYLHSEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---IKRNTFVGTPFWMAPE  189 (303)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECBTTB---CCBCCCCSCGGGCCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCC-ccCCCChheEEECCCCCEEEeecccceecCccc---cccCccCCCcCccCHH
Confidence            334445555  777  99999999999 999999999999999999999999987654322   1223457899999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      ++.+..+    +.++||||||+++|+|++|..||............. ....   +..+..+++.+.+++.+||+.||.+
T Consensus       190 ~~~~~~~----~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~l~~li~~~l~~dp~~  261 (303)
T 3a7i_A          190 VIKQSAY----DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-KNNP---PTLEGNYSKPLKEFVEACLNKEPSF  261 (303)
T ss_dssp             HHTTCCB----CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-HSCC---CCCCSSCCHHHHHHHHHHCCSSGGG
T ss_pred             HHhcCCC----CchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhh-cCCC---CCCccccCHHHHHHHHHHcCCChhh
Confidence            9988776    899999999999999999999997643211110000 0011   1223578899999999999999999


Q ss_pred             CCChhHHHHHHHhhcccC
Q psy16840        288 RPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       288 Rps~~~i~~~l~~~~~~~  305 (413)
                      |||+.++++...-.....
T Consensus       262 Rps~~~ll~~~~~~~~~~  279 (303)
T 3a7i_A          262 RPTAKELLKHKFILRNAK  279 (303)
T ss_dssp             SCCHHHHTTCHHHHHHCC
T ss_pred             CcCHHHHhhChhhhcCCC
Confidence            999999988765444433

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.95  E-value=5.1e-29  Score=248.73  Aligned_cols=162  Identities=27%  Similarity=0.425  Sum_probs=125.0

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||+|||++++ +||||||+|||++.++.+||+|||+++........  ......++..|+|||++
T Consensus       364 ~~~~i~~--qi~--~~L~~LH~~~i-vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~--~~~~~~~~~~y~aPE~~  436 (535)
T 2h8h_A          364 QLVDMAA--QIA--SGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAA  436 (535)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH--TTCSTTSCGGGSCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCe-eCCCCCHhhEEEcCCCcEEEcccccceecCCCcee--cccCCcCcccccCHHHh
Confidence            3344444  777  99999999999 99999999999999999999999999765432111  12233567889999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      .+..+    +.++|||||||++|||++ |..||.+....+..... ....+..   .+..+++.+.+||.+||+.||++|
T Consensus       437 ~~~~~----~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i-~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~R  508 (535)
T 2h8h_A          437 LYGRF----TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMP---CPPECPESLHDLMCQCWRKEPEER  508 (535)
T ss_dssp             HHCCC----CHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHH-HTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             ccCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCC---CCCCCCHHHHHHHHHHcCCChhHC
Confidence            87766    999999999999999999 99999765422211111 1111221   235788999999999999999999


Q ss_pred             CChhHHHHHHHhhcccCc
Q psy16840        289 PDFPTIRARLKHMKDGKQ  306 (413)
Q Consensus       289 ps~~~i~~~l~~~~~~~~  306 (413)
                      ||+.+|++.|+.+.....
T Consensus       509 Pt~~~l~~~L~~~~~~~~  526 (535)
T 2h8h_A          509 PTFEYLQAFLEDYFTSTE  526 (535)
T ss_dssp             CCHHHHHHHHHTSSCCCS
T ss_pred             cCHHHHHHHHHHHhhccC
Confidence            999999999999876443

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.95  E-value=9.6e-29  Score=230.68  Aligned_cols=141  Identities=14%  Similarity=0.193  Sum_probs=113.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++....      .....+||+.|+|||++.+..+    
T Consensus       114 qi~--~aL~~LH~~~i-vHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~----  180 (318)
T 1fot_A          114 EVC--LALEYLHSKDI-IYRDLKPENILLDKNGHIKITDFGFAKYVPD------VTYTLCGTPDYIAPEVVSTKPY----  180 (318)
T ss_dssp             HHH--HHHHHHHTTTE-ECCCCCGGGEEECTTSCEEECCCSSCEECSS------CBCCCCSCTTTCCHHHHTTCCB----
T ss_pred             HHH--HHHHHHHHCCc-cccCCChheEEEcCCCCEEEeecCcceecCC------ccccccCCccccCHhHhcCCCC----
Confidence            777  99999999999 9999999999999999999999999876432      1234578999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----ChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~  293 (413)
                      +.++|||||||++|||++|..||.+.+.......+.....     .++..+++++.+++.+||..||.+||     ++++
T Consensus       181 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~  255 (318)
T 1fot_A          181 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL-----RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTED  255 (318)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC-----CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHH
T ss_pred             CcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHH
Confidence            8999999999999999999999976442221111111111     12356789999999999999999999     7888


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++++
T Consensus       256 i~~h  259 (318)
T 1fot_A          256 VKNH  259 (318)
T ss_dssp             HHTS
T ss_pred             HhcC
Confidence            8754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.95  E-value=9.7e-29  Score=233.32  Aligned_cols=143  Identities=19%  Similarity=0.280  Sum_probs=108.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......   ......+||+.|+|||++.+..+    
T Consensus       118 qi~--~aL~~LH~~~i-vHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  187 (345)
T 3a8x_A          118 EIS--LALNYLHERGI-IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---DTTSTFCGTPNYIAPEILRGEDY----  187 (345)
T ss_dssp             HHH--HHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT---CCBCCCCSCGGGCCHHHHTTCCB----
T ss_pred             HHH--HHHHHHHHCCc-eecCCCHHHEEECCCCCEEEEeccccccccCCC---CcccccCCCccccCccccCCCCC----
Confidence            777  99999999999 999999999999999999999999987532211   12345689999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC----CCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCE----EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      +.++|||||||++|||++|..||..............    .........++..+++++.++|.+||+.||.+||++
T Consensus       188 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             ChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence            8999999999999999999999975332111100000    000000011335688999999999999999999996

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.95  E-value=1.1e-28  Score=227.09  Aligned_cols=158  Identities=28%  Similarity=0.499  Sum_probs=122.2

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  .||.|||++|+ +||||||+||+++.++.+||+|||++.......  ........+|+.|+|||++.
T Consensus       113 ~~~i~~--~i~--~~l~~lH~~~i-~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~  185 (288)
T 3kfa_A          113 LLYMAT--QIS--SAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLA  185 (288)
T ss_dssp             HHHHHH--HHH--HHHHHHHHHTC-CCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS--SEEETTEEECGGGCCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHHCCc-cCCCCCcceEEEcCCCCEEEccCccceeccCCc--cccccCCccccCcCChhhhc
Confidence            334444  777  99999999999 999999999999999999999999997654322  11223345678899999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++||||||+++|+|++ |..||.+.......... ....++.   .+..+++.+.+++.+||+.||.+||
T Consensus       186 ~~~~----~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rp  257 (288)
T 3kfa_A          186 YNKF----SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-EKDYRME---RPEGCPEKVYELMRACWQWNPSDRP  257 (288)
T ss_dssp             HCCC----CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-HTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-hccCCCC---CCCCCCHHHHHHHHHHhCCChhhCc
Confidence            8776    899999999999999999 99999765422211111 1111111   2356889999999999999999999


Q ss_pred             ChhHHHHHHHhhcc
Q psy16840        290 DFPTIRARLKHMKD  303 (413)
Q Consensus       290 s~~~i~~~l~~~~~  303 (413)
                      |+.++++.|+.+..
T Consensus       258 s~~~~~~~l~~~~~  271 (288)
T 3kfa_A          258 SFAEIHQAFETMFQ  271 (288)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH
Confidence            99999999887644

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.95  E-value=9.2e-29  Score=241.83  Aligned_cols=150  Identities=18%  Similarity=0.227  Sum_probs=116.2

Q ss_pred             HhhhccccCCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      +..++.  ||+  .||+|||+ +|+ +||||||+|||++.++.+||+|||+++......   ......+||+.|+|||++
T Consensus       250 ~~~~~~--qi~--~aL~~LH~~~gi-iHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~  321 (446)
T 4ejn_A          250 ARFYGA--EIV--SALDYLHSEKNV-VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKTFCGTPEYLAPEVL  321 (446)
T ss_dssp             HHHHHH--HHH--HHHHHHHHHTCC-CCCCCCGGGEEECSSSCEEECCCCCCCTTCC--------CCSSSCGGGCCHHHH
T ss_pred             HHHHHH--HHH--HHHHHHhhcCCE-EECCCCHHHEEECCCCCEEEccCCCceeccCCC---cccccccCCccccCHhhc
Confidence            344444  777  99999998 999 999999999999999999999999987533221   123456799999999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .+..+    +.++|||||||++|||++|..||.+.........+.....     .++..+++++.+||.+||+.||.+||
T Consensus       322 ~~~~~----~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~~~~~~~li~~~L~~dP~~R~  392 (446)
T 4ejn_A          322 EDNDY----GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-----RFPRTLGPEAKSLLSGLLKKDPKQRL  392 (446)
T ss_dssp             HTSCC----CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----CCCTTSCHHHHHHHHHHTCSSTTTST
T ss_pred             CCCCC----CCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCC-----CCCccCCHHHHHHHHHHcccCHHHhC
Confidence            88776    9999999999999999999999976442211111111111     12356789999999999999999999


Q ss_pred             -----ChhHHHHH
Q psy16840        290 -----DFPTIRAR  297 (413)
Q Consensus       290 -----s~~~i~~~  297 (413)
                           ++.+++++
T Consensus       393 ~~~~~t~~ell~h  405 (446)
T 4ejn_A          393 GGGSEDAKEIMQH  405 (446)
T ss_dssp             TCSTTTHHHHHTS
T ss_pred             CCCCCCHHHHHhC
Confidence                 99998764

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.95  E-value=3.6e-28  Score=227.72  Aligned_cols=157  Identities=18%  Similarity=0.245  Sum_probs=99.4

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe---EEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..++.  ||+  .||+|||++|+ +||||||+|||++.++   .+||+|||+++......   .......||+.|+||
T Consensus       107 ~~~~i~~--qi~--~~l~~LH~~~i-vH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~t~~y~aP  178 (325)
T 3kn6_A          107 EASYIMR--KLV--SAVSHMHDVGV-VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN---QPLKTPCFTLHYAAP  178 (325)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------------------
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCC-eecCCCHHHEEEecCCCcccEEEeccccceecCCCC---CcccccCCCcCccCH
Confidence            3444455  777  99999999999 9999999999998765   89999999997653322   122345689999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-------CCCCCCCCCCcccccCCChHHHHHHHHH
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-------EDCEEPFRPNLELLRDSCEPFVLACMRD  279 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (413)
                      |++.+..+    +.++|||||||++|+|++|..||.+........       .+........ ......+++++.+||.+
T Consensus       179 E~~~~~~~----~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~  253 (325)
T 3kn6_A          179 ELLNQNGY----DESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE-GEAWKNVSQEAKDLIQG  253 (325)
T ss_dssp             -----CCC----CHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCC-SHHHHTSCHHHHHHHHH
T ss_pred             HHhcCCCC----CCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCC-cccccCCCHHHHHHHHH
Confidence            99988776    899999999999999999999997644211100       1111111111 11124678999999999


Q ss_pred             HhccCCCCCCChhHHHHHHH
Q psy16840        280 CWAEAPESRPDFPTIRARLK  299 (413)
Q Consensus       280 cl~~~P~~Rps~~~i~~~l~  299 (413)
                      ||..||.+|||+.+++.+-+
T Consensus       254 ~L~~dP~~Rpt~~ell~h~w  273 (325)
T 3kn6_A          254 LLTVDPNKRLKMSGLRYNEW  273 (325)
T ss_dssp             HHCCCTTTCCCTTTSTTCGG
T ss_pred             HCCCChhHCCCHHHHhcChh
Confidence            99999999999999986543

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.95  E-value=2.4e-28  Score=234.75  Aligned_cols=164  Identities=15%  Similarity=0.257  Sum_probs=115.8

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC----CcccccccCccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND----SIGEHQYYRSLL  202 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~gt~~  202 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||.+.........    ........||+.
T Consensus       126 ~~~~~~~~~~--qi~--~~l~~LH~~~i-vHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~  200 (389)
T 3gni_B          126 NELAIAYILQ--GVL--KALDYIHHMGY-VHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP  200 (389)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGG
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEcccccceeecccccccccccccccccccccc
Confidence            3334445555  788  99999999999 99999999999999999999999997654321111    111223478999


Q ss_pred             ccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCC------------------------
Q psy16840        203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF------------------------  258 (413)
Q Consensus       203 y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~------------------------  258 (413)
                      |+|||++.+...  .++.++|||||||++|+|++|..||.+.+.............                        
T Consensus       201 y~aPE~~~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (389)
T 3gni_B          201 WLSPEVLQQNLQ--GYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVAN  278 (389)
T ss_dssp             GSCHHHHSTTSS--CBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------------------------
T ss_pred             ccCHHHHhccCC--CCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccc
Confidence            999999987321  128999999999999999999999977543221111100000                        


Q ss_pred             -----------------CCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        259 -----------------RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       259 -----------------~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                                       .......+..+++.+.+||.+||+.||.+|||+.+++++
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          279 SGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             ---------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             cccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence                             000011234578899999999999999999999999865

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.95  E-value=2.2e-29  Score=242.52  Aligned_cols=155  Identities=14%  Similarity=0.125  Sum_probs=116.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......  .......+||+.|+|||++.+......+
T Consensus       176 qi~--~aL~~LH~~gi-vHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~  250 (410)
T 3v8s_A          176 EVV--LALDAIHSMGF-IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVRCDTAVGTPDYISPEVLKSQGGDGYY  250 (410)
T ss_dssp             HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--EEECCSCCSCGGGCCHHHHHTTTTTCEE
T ss_pred             HHH--HHHHHHHHCCe-EeccCCHHHeeECCCCCEEEeccceeEeeccCC--cccccCCcCCccccCHHHhhccCCCcCC
Confidence            777  99999999999 999999999999999999999999997653221  1123356899999999999876521113


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC--CCChhHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES--RPDFPTIRA  296 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rps~~~i~~  296 (413)
                      +.++|||||||++|||++|..||.+.+.......+.........+ ....+++++.+||.+||..+|.+  ||++.+|++
T Consensus       251 ~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p-~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          251 GRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFP-DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             ETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC-TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             CCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCC-CcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            789999999999999999999998654222221111110001111 01367899999999999999988  999999987


Q ss_pred             HHH
Q psy16840        297 RLK  299 (413)
Q Consensus       297 ~l~  299 (413)
                      +..
T Consensus       330 Hp~  332 (410)
T 3v8s_A          330 HLF  332 (410)
T ss_dssp             SGG
T ss_pred             Ccc
Confidence            643

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.95  E-value=1.6e-28  Score=231.64  Aligned_cols=164  Identities=25%  Similarity=0.403  Sum_probs=120.0

Q ss_pred             CCchHHhhHhhh--------cCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC-cccccccCcccccCcccc
Q psy16840        139 DGIPRQGMTFLH--------RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       139 ~i~~a~gL~yLH--------~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~  209 (413)
                      ||+  .||.|||        +.++ +||||||+|||++.++.+||+|||++.......... .......||+.|+|||++
T Consensus       147 ~i~--~~l~~lH~~~~~~~~~~~i-vH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  223 (342)
T 1b6c_B          147 STA--SGLAHLHMEIVGTQGKPAI-AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL  223 (342)
T ss_dssp             HHH--HHHHHHHCCBCSTTCBCEE-ECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHH
T ss_pred             HHH--HHHHHHHHHHhhhcccCCe-eeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhh
Confidence            666  9999999        8899 999999999999999999999999987654322110 112345789999999999


Q ss_pred             cCCCCCC--CCCccchhHHHHHHHHHHHhC----------CCCCCCCCCCCCCC-----CCCCCCCCCCccc--ccCCCh
Q psy16840        210 RDTHAPI--RGTQKADVYAFAVILHEIIGR----------RGPFGGCGLYEPKG-----EDCEEPFRPNLEL--LRDSCE  270 (413)
Q Consensus       210 ~~~~~~~--~~~~~~Dv~slG~il~el~~g----------~~pf~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~  270 (413)
                      .+.....  .++.++||||||+++|||++|          ..||..........     .......++..+.  ....++
T Consensus       224 ~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (342)
T 1b6c_B          224 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEAL  303 (342)
T ss_dssp             TSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHH
T ss_pred             cccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHH
Confidence            8763210  114789999999999999999          67876543221111     1112222333221  123456


Q ss_pred             HHHHHHHHHHhccCCCCCCChhHHHHHHHhhcccC
Q psy16840        271 PFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       271 ~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~~~  305 (413)
                      +.+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus       304 ~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~  338 (342)
T 1b6c_B          304 RVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  338 (342)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence            78999999999999999999999999999886543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.95  E-value=9e-29  Score=227.48  Aligned_cols=154  Identities=22%  Similarity=0.377  Sum_probs=110.2

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEE---cCCeEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVV---TSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      ...+..++.  ||+  .||+|||++|+ +||||||+|||+   +.++.+||+|||++.......    ......||+.|+
T Consensus       123 ~~~~~~i~~--qi~--~~L~~LH~~~i-vH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~t~~y~  193 (285)
T 3is5_A          123 EGYVAELMK--QMM--NALAYFHSQHV-VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE----HSTNAAGTALYM  193 (285)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTC-CCCCCSGGGEEESSSSTTCCEEECCCCCCCC--------------CTTGGGC
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCE-EECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc----cCcCcccccCcC
Confidence            333444555  777  99999999999 999999999999   455889999999997654322    123456899999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      |||++.+. +    +.++||||||+++|+|++|..||.+..............  +........+++.+.+++.+||+.|
T Consensus       194 aPE~~~~~-~----~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~d  266 (285)
T 3is5_A          194 APEVFKRD-V----TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE--PNYAVECRPLTPQAVDLLKQMLTKD  266 (285)
T ss_dssp             CHHHHTTC-C----CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCC--CCCCHHHHHHHHHHTCSC
T ss_pred             ChHHhccC-C----CcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCC--cccccccCcCCHHHHHHHHHHccCC
Confidence            99998643 3    899999999999999999999997644221111000000  1111112346889999999999999


Q ss_pred             CCCCCChhHHHHH
Q psy16840        285 PESRPDFPTIRAR  297 (413)
Q Consensus       285 P~~Rps~~~i~~~  297 (413)
                      |.+|||+.++++.
T Consensus       267 P~~Rps~~e~l~h  279 (285)
T 3is5_A          267 PERRPSAAQVLHH  279 (285)
T ss_dssp             TTTSCCHHHHHTS
T ss_pred             hhhCcCHHHHhcC
Confidence            9999999999764

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.95  E-value=4e-28  Score=228.29  Aligned_cols=150  Identities=15%  Similarity=0.256  Sum_probs=118.3

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.......    ......||+.|+||
T Consensus       128 ~~~~~~~i~~--qi~--~~L~~LH~~~i-vH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~----~~~~~~gt~~y~aP  198 (335)
T 3dls_A          128 DEPLASYIFR--QLV--SAVGYLRLKDI-IHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK----LFYTFCGTIEYCAP  198 (335)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECTTSCEEECCCTTCEECCTTC----CBCEECSCGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCe-EEeccCHHHEEEcCCCcEEEeecccceECCCCC----ceeccCCCccccCh
Confidence            3334444555  777  99999999999 999999999999999999999999997654322    12345789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+..+.   +.++|||||||++|+|++|..||.....      .......     .+..+++++.++|.+||+.||.
T Consensus       199 E~~~~~~~~---~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~~-----~~~~~~~~l~~li~~~L~~dP~  264 (335)
T 3dls_A          199 EVLMGNPYR---GPELEMWSLGVTLYTLVFEENPFCELEE------TVEAAIH-----PPYLVSKELMSLVSGLLQPVPE  264 (335)
T ss_dssp             HHHTTCCBC---SHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTTTCCC-----CSSCCCHHHHHHHHHHTCSSGG
T ss_pred             hhhcCCCCC---CCcccchhHHHHHHHHHhCCCchhhHHH------HHhhccC-----CCcccCHHHHHHHHHHccCChh
Confidence            999876542   7889999999999999999999975321      1111111     1245788999999999999999


Q ss_pred             CCCChhHHHHHHH
Q psy16840        287 SRPDFPTIRARLK  299 (413)
Q Consensus       287 ~Rps~~~i~~~l~  299 (413)
                      +|||+.++++...
T Consensus       265 ~Rps~~ell~hp~  277 (335)
T 3dls_A          265 RRTTLEKLVTDPW  277 (335)
T ss_dssp             GSCCHHHHHHCTT
T ss_pred             hCcCHHHHhcCcc
Confidence            9999999988644

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.95  E-value=9.6e-29  Score=226.44  Aligned_cols=162  Identities=28%  Similarity=0.458  Sum_probs=123.7

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  |++  .||+|||++|+ +||||||+|||++.++.+||+|||++........  .......+++.|+|||
T Consensus       108 ~~~~~~i~~--qi~--~~l~~lH~~~i-~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE  180 (279)
T 1qpc_A          108 INKLLDMAA--QIA--EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEY--TAREGAKFPIKWTAPE  180 (279)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE--ECCTTCCCCTTTSCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCe-eccCCCHhhEEEcCCCCEEECCCcccccccCccc--ccccCCCCccCccChh
Confidence            333444555  777  99999999999 9999999999999999999999999876543221  1122345678899999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      ++.+..+    +.++||||||+++|+|++ |..||.+.......... ....++.   .+..+++.+.+++.+||+.||+
T Consensus       181 ~~~~~~~----~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~l~~li~~~l~~~p~  252 (279)
T 1qpc_A          181 AINYGTF----TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMV---RPDNCPEELYQLMRLCWKERPE  252 (279)
T ss_dssp             HHHHCEE----CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-HTTCCCC---CCTTCCHHHHHHHHHHTCSSGG
T ss_pred             hhccCCC----CchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHH-hcccCCC---CcccccHHHHHHHHHHhccChh
Confidence            9987766    899999999999999999 89999764422111111 0111111   2356889999999999999999


Q ss_pred             CCCChhHHHHHHHhhccc
Q psy16840        287 SRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       287 ~Rps~~~i~~~l~~~~~~  304 (413)
                      +|||+.++++.|+.+...
T Consensus       253 ~Rps~~~l~~~l~~~~~~  270 (279)
T 1qpc_A          253 DRPTFDYLRSVLEDFFTA  270 (279)
T ss_dssp             GSCCHHHHHHHHHHHHHH
T ss_pred             hCCCHHHHHHHHHHHHHh
Confidence            999999999999887543

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.95  E-value=9.3e-29  Score=233.83  Aligned_cols=141  Identities=16%  Similarity=0.166  Sum_probs=113.6

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++.....      ....+||+.|+|||++.+..+    
T Consensus       149 qi~--~aL~~LH~~~i-vHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~----  215 (350)
T 1rdq_E          149 QIV--LTFEYLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWTLCGTPEALAPEIILSKGY----  215 (350)
T ss_dssp             HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECSSC------BCCCEECGGGCCHHHHTTCCB----
T ss_pred             HHH--HHHHHHHHCCc-ccccCccceEEECCCCCEEEcccccceeccCC------cccccCCccccCHHHhcCCCC----
Confidence            777  99999999999 99999999999999999999999999765321      234578999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC-----hhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD-----FPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps-----~~~  293 (413)
                      +.++|||||||++|||++|..||.+.+.......+.....     .++..+++++.++|.+||+.||.+||+     +.+
T Consensus       216 ~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~e  290 (350)
T 1rdq_E          216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND  290 (350)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHH
T ss_pred             CCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCC-----CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHH
Confidence            8999999999999999999999976542221111111111     123568899999999999999999998     777


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++++
T Consensus       291 i~~h  294 (350)
T 1rdq_E          291 IKNH  294 (350)
T ss_dssp             HHTS
T ss_pred             HHhC
Confidence            7554

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.95  E-value=8.1e-29  Score=239.29  Aligned_cols=167  Identities=17%  Similarity=0.190  Sum_probs=112.2

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEE----cCCeEEEEeccccccccccccCCCcccccccCcc
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVV----TSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL  201 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~  201 (413)
                      +....+..++.  ||+  .||+|||++|+ +||||||+|||+    +.++.+||+|||+++................||+
T Consensus       125 l~~~~~~~i~~--qi~--~al~~LH~~~i-vH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~  199 (405)
T 3rgf_A          125 LPRGMVKSLLY--QIL--DGIHYLHANWV-LHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF  199 (405)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHhCCE-eCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecC
Confidence            34444555566  888  99999999999 999999999999    6778999999999987643322222334567899


Q ss_pred             cccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC------------CCCCCCCcc------
Q psy16840        202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC------------EEPFRPNLE------  263 (413)
Q Consensus       202 ~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~------------~~~~~~~~~------  263 (413)
                      .|+|||++.+...   ++.++|||||||++|+|++|..||.+...........            ..+......      
T Consensus       200 ~y~aPE~~~~~~~---~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~  276 (405)
T 3rgf_A          200 WYRAPELLLGARH---YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMP  276 (405)
T ss_dssp             TTCCHHHHTTCCS---CCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGST
T ss_pred             cccCchhhcCCCc---ccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCc
Confidence            9999999987542   2899999999999999999999997644211000000            000000000      


Q ss_pred             ------------------------cccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHh
Q psy16840        264 ------------------------LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH  300 (413)
Q Consensus       264 ------------------------~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~  300 (413)
                                              ......++.+.+||.+||..||.+|||+.+++++-.-
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f  337 (405)
T 3rgf_A          277 EHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  337 (405)
T ss_dssp             THHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             chhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhh
Confidence                                    0001226788999999999999999999999987553

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=3.6e-28  Score=231.48  Aligned_cols=153  Identities=22%  Similarity=0.354  Sum_probs=118.3

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....      .....+|+.|+|||++
T Consensus       129 ~~~~~~~--qi~--~~L~~LH~~~i-vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~  197 (367)
T 1cm8_A          129 RIQFLVY--QML--KGLRYIHAAGI-IHRDLKPGNLAVNEDCELKILDFGLARQADSE------MTGYVVTRWYRAPEVI  197 (367)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEECCSS------CCSSCSCGGGCCTHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCc-cccCcCHHHEEEcCCCCEEEEeeecccccccc------cCcCcCCCCcCCHHHH
Confidence            3444555  888  99999999999 99999999999999999999999999764321      2345789999999998


Q ss_pred             cC-CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC--------------------------CCCCCCCCc
Q psy16840        210 RD-THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED--------------------------CEEPFRPNL  262 (413)
Q Consensus       210 ~~-~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~--------------------------~~~~~~~~~  262 (413)
                      .+ ..+    +.++||||+||++|||++|+.||.+.+.......+                          .........
T Consensus       198 ~~~~~~----~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (367)
T 1cm8_A          198 LNWMRY----TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDF  273 (367)
T ss_dssp             HTTTCC----CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCG
T ss_pred             hCCCCC----ChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCH
Confidence            87 444    89999999999999999999999865421110000                          000111222


Q ss_pred             ccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ......+++.+.+|+.+||..||.+|||+.+++++
T Consensus       274 ~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          274 ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence            23345678999999999999999999999999875

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.2e-27  Score=226.21  Aligned_cols=159  Identities=22%  Similarity=0.230  Sum_probs=117.8

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++
T Consensus       113 ~~~~~~~--qi~--~~l~~lH~~~i-vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~t~~y~aPE~~  184 (346)
T 1ua2_A          113 HIKAYML--MTL--QGLEYLHQHWI-LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN---RAYTHQVVTRWYRAPELL  184 (346)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC---CCCCCSCCCCTTCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCE-ECCCCCHHHEEEcCCCCEEEEecccceeccCCc---ccCCcccccccccCchHh
Confidence            3344555  777  99999999999 999999999999999999999999987653222   112345789999999998


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC---------------CCCC------CCCCCC--Cccccc
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK---------------GEDC------EEPFRP--NLELLR  266 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~---------------~~~~------~~~~~~--~~~~~~  266 (413)
                      .+...   ++.++|||||||++|+|++|.+||.+.+.....               ....      .....+  ......
T Consensus       185 ~~~~~---~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (346)
T 1ua2_A          185 FGARM---YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIF  261 (346)
T ss_dssp             TTCSC---CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHC
T ss_pred             hCCCC---CCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhh
Confidence            76432   289999999999999999999999764311000               0000      000001  111223


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCChhHHHHHHH
Q psy16840        267 DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK  299 (413)
Q Consensus       267 ~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~  299 (413)
                      ..+++++.+||.+||..||.+|||+.+++++..
T Consensus       262 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~  294 (346)
T 1ua2_A          262 SAAGDDLLDLIQGLFLFNPCARITATQALKMKY  294 (346)
T ss_dssp             TTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred             ccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence            567899999999999999999999999988654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.95  E-value=3.6e-29  Score=231.93  Aligned_cols=161  Identities=22%  Similarity=0.313  Sum_probs=121.5

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  |++  .||+|||++|+ +||||||+|||++.++.+||+|||++.................||..|+|||++
T Consensus       127 ~~~~~~~--~i~--~~l~~lH~~~i-~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  201 (302)
T 4e5w_A          127 QQLKYAV--QIC--KGMDYLGSRQY-VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECL  201 (302)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHhhcCCc-ccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeee
Confidence            3344444  777  99999999999 999999999999999999999999998765433222223445678899999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCC--------CCCCC------CCCCCCCCCCcccccCCChHHHHH
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGL--------YEPKG------EDCEEPFRPNLELLRDSCEPFVLA  275 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--------~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~  275 (413)
                      .+..+    +.++||||||+++|+|++|..|+.....        .....      .......+.   ..+..+++.+.+
T Consensus       202 ~~~~~----~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~  274 (302)
T 4e5w_A          202 MQSKF----YIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL---PCPPNCPDEVYQ  274 (302)
T ss_dssp             HHCEE----EHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCC---CCCTTCCHHHHH
T ss_pred             cCCCC----CcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCC---CCCCCCCHHHHH
Confidence            88776    8999999999999999999988642110        00000      000001111   123568899999


Q ss_pred             HHHHHhccCCCCCCChhHHHHHHHhhc
Q psy16840        276 CMRDCWAEAPESRPDFPTIRARLKHMK  302 (413)
Q Consensus       276 li~~cl~~~P~~Rps~~~i~~~l~~~~  302 (413)
                      ++.+||+.||.+|||+.++++.|+.+.
T Consensus       275 li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          275 LMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            999999999999999999999998764

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.95  E-value=1.4e-28  Score=233.05  Aligned_cols=158  Identities=15%  Similarity=0.146  Sum_probs=118.5

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe---EEEEeccccccccccccCCCcccccccCcccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||++.++   .+||+|||++.......   .......||+.|
T Consensus       128 ~~~~~~~i~~--qi~--~al~~lH~~~i-vHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~~gt~~y  199 (351)
T 3c0i_A          128 SEAVASHYMR--QIL--EALRYCHDNNI-IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG---LVAGGRVGTPHF  199 (351)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTS---CBCCCCCSCGGG
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCc-eeccCChHHeEEecCCCCCcEEEecCcceeEecCCC---eeecCCcCCcCc
Confidence            3334445555  888  99999999999 9999999999998654   49999999997654321   113345799999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      +|||++.+..+    +.++|||||||++|+|++|..||.+... .....+........ +.....+++++.++|.+||..
T Consensus       200 ~aPE~~~~~~~----~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~  273 (351)
T 3c0i_A          200 MAPEVVKREPY----GKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMN-PRQWSHISESAKDLVRRMLML  273 (351)
T ss_dssp             CCHHHHTTCCB----CTHHHHHHHHHHHHHHHHSSCSSCSSHH-HHHHHHHHTCCCCC-HHHHTTSCHHHHHHHHHHTCS
T ss_pred             cCHHHHcCCCC----CchHhhHHHHHHHHHHHHCCCCCCCcHH-HHHHHHHcCCCCCC-ccccccCCHHHHHHHHHHCCC
Confidence            99999988776    8999999999999999999999976321 00000111111111 112256789999999999999


Q ss_pred             CCCCCCChhHHHHHH
Q psy16840        284 APESRPDFPTIRARL  298 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l  298 (413)
                      ||.+|||+.+++++.
T Consensus       274 dP~~R~s~~e~l~hp  288 (351)
T 3c0i_A          274 DPAERITVYEALNHP  288 (351)
T ss_dssp             STTTSCCHHHHHTSH
T ss_pred             ChhHCcCHHHHhcCh
Confidence            999999999998653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.94  E-value=5.7e-29  Score=233.39  Aligned_cols=166  Identities=25%  Similarity=0.366  Sum_probs=123.6

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++.................||+.|+|||
T Consensus       126 ~~~~~~i~~--qi~--~al~~lH~~~i-vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  200 (327)
T 3lxl_A          126 ASRLLLYSS--QIC--KGMEYLGSRRC-VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE  200 (327)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCc-cCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHH
Confidence            333444444  777  99999999999 9999999999999999999999999987643332222234456788999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--------------CCCCCCCCCCcccccCCChHHH
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--------------EDCEEPFRPNLELLRDSCEPFV  273 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l  273 (413)
                      ++.+..+    +.++||||||+++|+|++|..||..........              .......++   ..+..+++.+
T Consensus       201 ~~~~~~~----~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l  273 (327)
T 3lxl_A          201 SLSDNIF----SRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRL---PAPPACPAEV  273 (327)
T ss_dssp             HHHHCEE----EHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCC---CCCTTCCHHH
T ss_pred             HhccCCC----ChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCC---CCCCcccHHH
Confidence            9988776    899999999999999999999985432100000              000001111   1235788999


Q ss_pred             HHHHHHHhccCCCCCCChhHHHHHHHhhcccC
Q psy16840        274 LACMRDCWAEAPESRPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       274 ~~li~~cl~~~P~~Rps~~~i~~~l~~~~~~~  305 (413)
                      .+++.+||+.||.+|||+.++++.|+.+....
T Consensus       274 ~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  305 (327)
T 3lxl_A          274 HELMKLCWAPSPQDRPSFSALGPQLDMLWSGS  305 (327)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999886544

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.94  E-value=1.4e-28  Score=234.65  Aligned_cols=155  Identities=15%  Similarity=0.126  Sum_probs=118.5

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEE--cCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVV--TSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      .+..++.  ||+  .||+|||++|+ +||||||+|||+  +.++.+||+|||+++.......    .....||+.|+|||
T Consensus       188 ~~~~i~~--qi~--~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE  258 (373)
T 2x4f_A          188 DTILFMK--QIC--EGIRHMHQMYI-LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK----LKVNFGTPEFLAPE  258 (373)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB----CCCCCSSCTTCCHH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCc-ccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc----cccccCCCcEeChh
Confidence            3344455  777  99999999999 999999999999  5678999999999987543221    23446899999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      ++.+..+    +.++|||||||++|||++|..||.+.+.......+......... .....+++++.+||.+||+.||.+
T Consensus       259 ~~~~~~~----~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~  333 (373)
T 2x4f_A          259 VVNYDFV----SFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED-EEFQDISEEAKEFISKLLIKEKSW  333 (373)
T ss_dssp             HHTTCBC----CHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCS-GGGTTSCHHHHHHHHTTSCSSGGG
T ss_pred             hccCCCC----CcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCh-hhhccCCHHHHHHHHHHcCCChhh
Confidence            9987766    89999999999999999999999765422211111111111111 122568899999999999999999


Q ss_pred             CCChhHHHHHH
Q psy16840        288 RPDFPTIRARL  298 (413)
Q Consensus       288 Rps~~~i~~~l  298 (413)
                      |||+.++++..
T Consensus       334 Rps~~e~l~hp  344 (373)
T 2x4f_A          334 RISASEALKHP  344 (373)
T ss_dssp             SCCHHHHHHSH
T ss_pred             CCCHHHHhcCc
Confidence            99999998753

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.94  E-value=3.9e-29  Score=240.98  Aligned_cols=149  Identities=17%  Similarity=0.199  Sum_probs=112.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC-------
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD-------  211 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------  211 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......  .......+||+.|+|||++..       
T Consensus       170 qi~--~aL~~LH~~gi-iHrDLKp~NILld~~g~vkL~DFGla~~~~~~~--~~~~~~~~Gt~~Y~APE~l~~~~~~~~~  244 (412)
T 2vd5_A          170 EIV--MAIDSVHRLGY-VHRDIKPDNILLDRCGHIRLADFGSCLKLRADG--TVRSLVAVGTPDYLSPEILQAVGGGPGT  244 (412)
T ss_dssp             HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--CEECSSCCSCGGGCCHHHHHHHHTCTTC
T ss_pred             HHH--HHHHHHHHCCe-eecccCHHHeeecCCCCEEEeechhheeccCCC--ccccceeccccCcCCHHHHhhcccCcCC
Confidence            777  99999999999 999999999999999999999999997654321  112234589999999999973       


Q ss_pred             CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC---
Q psy16840        212 THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR---  288 (413)
Q Consensus       212 ~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R---  288 (413)
                      ..+    +.++|||||||++|||++|+.||.+.+.......+.........+..+..+++++.+||.+||. +|.+|   
T Consensus       245 ~~~----~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr  319 (412)
T 2vd5_A          245 GSY----GPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGR  319 (412)
T ss_dssp             SEE----CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTT
T ss_pred             CCC----ChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCC
Confidence            334    8999999999999999999999987543222111111111111122235789999999999999 99998   


Q ss_pred             CChhHHHHH
Q psy16840        289 PDFPTIRAR  297 (413)
Q Consensus       289 ps~~~i~~~  297 (413)
                      |++++++++
T Consensus       320 ~~~~ei~~H  328 (412)
T 2vd5_A          320 GGAGDFRTH  328 (412)
T ss_dssp             TTHHHHHTS
T ss_pred             CCHHHHhcC
Confidence            588888764

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.94  E-value=2.3e-28  Score=227.24  Aligned_cols=149  Identities=27%  Similarity=0.461  Sum_probs=111.5

Q ss_pred             CCchHHhhHhhhc---CCCcccCCCCCCCeEEcCCeE-EEEeccccccccccccCCCcccccccCcccccCcccccCCCC
Q psy16840        139 DGIPRQGMTFLHR---SPIGCHGNLKSSNCVVTSRWV-LQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA  214 (413)
Q Consensus       139 ~i~~a~gL~yLH~---~~iiiHrdlkp~Nill~~~~~-~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  214 (413)
                      |++  +||+|||+   +|+ +||||||+|||++.++. +||+|||++......      .....||+.|+|||++.+..+
T Consensus       110 qi~--~~l~~LH~~~~~~i-vH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~  180 (307)
T 2eva_A          110 QCS--QGVAYLHSMQPKAL-IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH------MTNNKGSAAWMAPEVFEGSNY  180 (307)
T ss_dssp             HHH--HHHHHHHTCSSSCC-CCCCCSGGGEEEETTTTEEEECCCCC------------------CCTTSSCHHHHTCCCC
T ss_pred             HHH--HHHHHHHhCCCCCe-ecCCCChhHEEEeCCCCEEEEcccccccccccc------cccCCCCCceEChhhhCCCCC
Confidence            666  99999999   788 99999999999988775 899999998654321      123468999999999988766


Q ss_pred             CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-CCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhH
Q psy16840        215 PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPT  293 (413)
Q Consensus       215 ~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~  293 (413)
                          +.++||||||+++|+|++|+.||.......... .......++.   ....+++.+.+++.+||+.||.+|||+.+
T Consensus       181 ----~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~e  253 (307)
T 2eva_A          181 ----SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP---LIKNLPKPIESLMTRCWSKDPSQRPSMEE  253 (307)
T ss_dssp             ----CTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCC---CBTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ----CcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCC---cccccCHHHHHHHHHHhcCChhhCcCHHH
Confidence                899999999999999999999997543211000 0000111121   23578899999999999999999999999


Q ss_pred             HHHHHHhhcc
Q psy16840        294 IRARLKHMKD  303 (413)
Q Consensus       294 i~~~l~~~~~  303 (413)
                      +++.|+.+..
T Consensus       254 ll~~L~~~~~  263 (307)
T 2eva_A          254 IVKIMTHLMR  263 (307)
T ss_dssp             HHHHHHHHGG
T ss_pred             HHHHHHHHHH
Confidence            9999988754

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.94  E-value=2.3e-28  Score=227.48  Aligned_cols=164  Identities=20%  Similarity=0.209  Sum_probs=114.8

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++........  .......|++.|+|||++
T Consensus       135 ~~~~i~~--qi~--~~l~~lH~~~i-~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~  207 (309)
T 2h34_A          135 RAVAIVR--QIG--SALDAAHAAGA-THRDVKPENILVSADDFAYLVDFGIASATTDEKL--TQLGNTVGTLYYMAPERF  207 (309)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEECTTSCEEECSCCC------------------CCGGGCCGGGT
T ss_pred             HHHHHHH--HHH--HHHHHHHHCcC-CcCCCChHHEEEcCCCCEEEecCccCcccccccc--ccccccCCCcCccCHHHH
Confidence            3344455  777  99999999999 9999999999999999999999999876543221  112345689999999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .+..+    +.++||||||+++|+|++|..||.+........... . ..+.....+..+++.+.+++.+||+.||.+||
T Consensus       208 ~~~~~----~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp  281 (309)
T 2h34_A          208 SESHA----TYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHIN-Q-AIPRPSTVRPGIPVAFDAVIARGMAKNPEDRY  281 (309)
T ss_dssp             CC--------CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHH-S-CCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSC
T ss_pred             cCCCC----CchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhc-c-CCCCccccCCCCCHHHHHHHHHhccCCHHHHH
Confidence            88766    899999999999999999999997643211000000 0 11112233467889999999999999999999


Q ss_pred             -ChhHHHHHHHhhcccCc
Q psy16840        290 -DFPTIRARLKHMKDGKQ  306 (413)
Q Consensus       290 -s~~~i~~~l~~~~~~~~  306 (413)
                       +++++++.|+.......
T Consensus       282 ~s~~~l~~~l~~~l~~~~  299 (309)
T 2h34_A          282 VTCGDLSAAAHAALATAD  299 (309)
T ss_dssp             SSHHHHHHHHHHTCC---
T ss_pred             HhHHHHHHHHHHHHHhhc
Confidence             99999999998766543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.94  E-value=3.7e-28  Score=235.44  Aligned_cols=163  Identities=15%  Similarity=0.176  Sum_probs=113.3

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC---eEEEEeccccccccccccCCCcccccccCcccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      ....+..++.  ||+  .||+|||++++ +||||||+|||++.+   +.+||+|||+++......    ......||+.|
T Consensus       237 ~~~~~~~i~~--qi~--~~l~~LH~~~i-vHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y  307 (419)
T 3i6u_A          237 KEATCKLYFY--QML--LAVQYLHENGI-IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTY  307 (419)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC---------------CTT
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCc-cccCCChHhEEEecCCCcceEEEeecccceecCCCc----cccccCCCCCc
Confidence            3444445555  888  99999999999 999999999999754   469999999998754221    22345789999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      +|||++.+... ..++.++|||||||++|+|++|..||.+...................+.....+++.+.++|.+||+.
T Consensus       308 ~aPE~~~~~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  386 (419)
T 3i6u_A          308 LAPEVLVSVGT-AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVV  386 (419)
T ss_dssp             CCTTTTC-----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCS
T ss_pred             cCceeeecCCC-CCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccC
Confidence            99999864211 12388999999999999999999999764322211111111111222233357889999999999999


Q ss_pred             CCCCCCChhHHHHHHH
Q psy16840        284 APESRPDFPTIRARLK  299 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l~  299 (413)
                      ||.+|||+.+++++..
T Consensus       387 dP~~Rps~~e~l~hp~  402 (419)
T 3i6u_A          387 DPKARFTTEEALRHPW  402 (419)
T ss_dssp             STTTSCCHHHHHHSGG
T ss_pred             ChhHCcCHHHHhCCcc
Confidence            9999999999987643

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.94  E-value=2.2e-28  Score=235.48  Aligned_cols=169  Identities=17%  Similarity=0.161  Sum_probs=121.3

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEE----cCCeEEEEeccccccccccccCCCcccccccCccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVV----TSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL  202 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~  202 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||+    +.++.+||+|||+++.......    .....||+.
T Consensus       110 ~~~~~~~i~~--qi~--~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~----~~~~~gt~~  180 (396)
T 4eut_A          110 PESEFLIVLR--DVV--GGMNHLRENGI-VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ----FVSLYGTEE  180 (396)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGG----SSCSSSCCT
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCE-EECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCc----cccccCCcc
Confidence            3333444555  777  99999999999 999999999999    8889999999999986543221    234578999


Q ss_pred             ccCcccccCCCCC----CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC-------------------CCCCC--
Q psy16840        203 WKAPELLRDTHAP----IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE-------------------DCEEP--  257 (413)
Q Consensus       203 y~aPE~~~~~~~~----~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~-------------------~~~~~--  257 (413)
                      |+|||++.+....    ..++.++|||||||++|||++|..||...........                   .....  
T Consensus       181 y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  260 (396)
T 4eut_A          181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPID  260 (396)
T ss_dssp             TCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEE
T ss_pred             ccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcc
Confidence            9999998652100    0127899999999999999999999965332111000                   00000  


Q ss_pred             ---CCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhccc
Q psy16840        258 ---FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       258 ---~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~~  304 (413)
                         ..+....+...+++.+.+++.+||+.||++||++.++++.+..+...
T Consensus       261 ~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          261 WSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             EESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             cCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence               00111112244677899999999999999999999999999887654

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.94  E-value=2.7e-28  Score=232.86  Aligned_cols=154  Identities=13%  Similarity=0.231  Sum_probs=114.6

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++.....    ......+||+.|+|||++.
T Consensus       117 ~~~~~~--qi~--~aL~~LH~~gi-vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~----~~~~~~~gt~~Y~aPE~~~  187 (384)
T 4fr4_A          117 VKLFIC--ELV--MALDYLQNQRI-IHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----TQITTMAGTKPYMAPEMFS  187 (384)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECCTT----CCBCCCCSCGGGCCGGGTC
T ss_pred             HHHHHH--HHH--HHHHHHHHCCc-eeccCcHHHeEECCCCCEEEeccceeeeccCC----CceeccCCCccccCCeeec
Confidence            334444  777  99999999999 99999999999999999999999999865322    2234567999999999997


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +... ..++.++|||||||++|+|++|..||.............  .........+..+++.+.+||.+||+.||.+||+
T Consensus       188 ~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~--~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s  264 (384)
T 4fr4_A          188 SRKG-AGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH--TFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS  264 (384)
T ss_dssp             CCSS-CCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHH--HHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             cCCC-CCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHH--HHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcc
Confidence            5321 123889999999999999999999997543221110000  0000011123568899999999999999999998


Q ss_pred             -hhHHHH
Q psy16840        291 -FPTIRA  296 (413)
Q Consensus       291 -~~~i~~  296 (413)
                       +.+++.
T Consensus       265 ~~~~l~~  271 (384)
T 4fr4_A          265 QLSDVQN  271 (384)
T ss_dssp             SHHHHHT
T ss_pred             cHHHHHc
Confidence             666654

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.94  E-value=1.1e-27  Score=233.14  Aligned_cols=162  Identities=18%  Similarity=0.213  Sum_probs=112.3

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC---------------
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS---------------  191 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~---------------  191 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++.........               
T Consensus       127 ~~~~~~~i~~--qil--~aL~~LH~~gi-vHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~  201 (432)
T 3n9x_A          127 TEEHIKTILY--NLL--LGENFIHESGI-IHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN  201 (432)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEEC----------------------
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCC-CCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccc
Confidence            3444455555  888  99999999999 999999999999999999999999998764322110               


Q ss_pred             ----cccccccCcccccCcccccC-CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCC-----------CCCCCCCC---
Q psy16840        192 ----IGEHQYYRSLLWKAPELLRD-THAPIRGTQKADVYAFAVILHEIIGRRGPFGGC-----------GLYEPKGE---  252 (413)
Q Consensus       192 ----~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~-----------~~~~~~~~---  252 (413)
                          ......+||+.|+|||++.. ..+    +.++|||||||++|||++|..||...           +.......   
T Consensus       202 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~----~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~  277 (432)
T 3n9x_A          202 KNLKKQLTSHVVTRWYRAPELILLQENY----TKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNS  277 (432)
T ss_dssp             ---------CCCCCTTCCHHHHTTCSCC----CTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC-------
T ss_pred             cchhccccCCCCCccccCHHHHhcCCCC----CcccccchHHHHHHHHHhcccccccccccccccCCCccccccCccccc
Confidence                11245688999999998644 434    99999999999999999866555432           11000000   


Q ss_pred             ----------------------------------------CCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh
Q psy16840        253 ----------------------------------------DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP  292 (413)
Q Consensus       253 ----------------------------------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~  292 (413)
                                                              ..............+.+++++.+||.+||..||.+|||+.
T Consensus       278 ~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~  357 (432)
T 3n9x_A          278 KKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITID  357 (432)
T ss_dssp             ---CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             ccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHH
Confidence                                                    0000000111112246789999999999999999999999


Q ss_pred             HHHHH
Q psy16840        293 TIRAR  297 (413)
Q Consensus       293 ~i~~~  297 (413)
                      +++++
T Consensus       358 e~L~H  362 (432)
T 3n9x_A          358 QALDH  362 (432)
T ss_dssp             HHHTC
T ss_pred             HHhcC
Confidence            99875

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.94  E-value=2.7e-28  Score=230.42  Aligned_cols=160  Identities=19%  Similarity=0.279  Sum_probs=115.6

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe--EEEEeccccccccccccC-CCcccccccCcccccCc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW--VLQVTDFGLHELRHCAEN-DSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~--~~kl~Dfg~a~~~~~~~~-~~~~~~~~~gt~~y~aP  206 (413)
                      .+..++.  ||+  .||+|||++++ +||||||+|||++.++  .+||+|||++........ .........||+.|+||
T Consensus       169 ~~~~i~~--qi~--~~l~~LH~~~i-vH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP  243 (345)
T 3hko_A          169 LISNIMR--QIF--SALHYLHNQGI-CHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP  243 (345)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCc-cccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCc
Confidence            3444555  888  99999999999 9999999999998765  899999999986543221 11123455789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+...  .++.++|||||||++|+|++|..||.+...................+ ....+++.+.++|.+||+.||.
T Consensus       244 E~~~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~  320 (345)
T 3hko_A          244 EVLNTTNE--SYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENP-NYNVLSPLARDLLSNLLNRNVD  320 (345)
T ss_dssp             HHHTCSSS--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSG-GGGGSCHHHHHHHHHHSCSCTT
T ss_pred             hhhccCCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCc-ccccCCHHHHHHHHHHcCCChh
Confidence            99975322  23899999999999999999999997654222111111111111111 1235789999999999999999


Q ss_pred             CCCChhHHHHH
Q psy16840        287 SRPDFPTIRAR  297 (413)
Q Consensus       287 ~Rps~~~i~~~  297 (413)
                      +|||+.++++.
T Consensus       321 ~Rps~~~~l~h  331 (345)
T 3hko_A          321 ERFDAMRALQH  331 (345)
T ss_dssp             TSCCHHHHHHS
T ss_pred             HCCCHHHHhcC
Confidence            99999999875

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.94  E-value=4.6e-29  Score=233.08  Aligned_cols=165  Identities=22%  Similarity=0.332  Sum_probs=123.1

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.................+|+.|+||
T Consensus       132 ~~~~~~~i~~--~l~--~~l~~LH~~~i-vH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aP  206 (318)
T 3lxp_A          132 GLAQLLLFAQ--QIC--EGMAYLHAQHY-IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP  206 (318)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCc-cCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeCh
Confidence            3334444555  777  99999999999 999999999999999999999999998764332222223345678889999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC-----CCC---------CCCCCCCCCCcccccCCChHH
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE-----PKG---------EDCEEPFRPNLELLRDSCEPF  272 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~~~  272 (413)
                      |++.+..+    +.++||||||+++|+|++|..||.......     ...         ........+   ..+..+++.
T Consensus       207 E~~~~~~~----~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  279 (318)
T 3lxp_A          207 ECLKEYKF----YYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL---PRPDKCPAE  279 (318)
T ss_dssp             HHHHHCEE----EHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCC---CCCTTCCHH
T ss_pred             HHhcCCCC----CcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCC---CCCccccHH
Confidence            99988776    899999999999999999999986421000     000         000011111   123568899


Q ss_pred             HHHHHHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        273 VLACMRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       273 l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      +.++|.+||+.||.+|||+.++++.|+.+..
T Consensus       280 l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  310 (318)
T 3lxp_A          280 VYHLMKNCWETEASFRPTFENLIPILKTVHE  310 (318)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999999887754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.94  E-value=1.5e-27  Score=235.85  Aligned_cols=155  Identities=21%  Similarity=0.263  Sum_probs=117.0

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEc---CCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVT---SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..++.  ||+  .||.|||++|+ +||||||+|||++   .++.+||+|||++.......    ......||+.|+||
T Consensus       122 ~~~~i~~--qi~--~al~~lH~~~i-vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aP  192 (486)
T 3mwu_A          122 DAARIIK--QVF--SGITYMHKHNI-VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----KMKDRIGTAYYIAP  192 (486)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--------CCTTGGGGCCG
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCe-EeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC----ccCCCcCCCCCCCH
Confidence            3444555  788  99999999999 9999999999995   45689999999987653321    12345789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+. +    +.++|||||||++|+|++|..||.+.+.......+.........+. ...+++++.++|.+||..||.
T Consensus       193 E~~~~~-~----~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~~dp~  266 (486)
T 3mwu_A          193 EVLRGT-Y----DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQ-WRTISDDAKDLIRKMLTFHPS  266 (486)
T ss_dssp             GGGGSC-C----CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGG-GGGSCHHHHHHHHHHTCSSTT
T ss_pred             HHhCCC-C----CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcc-cCCCCHHHHHHHHHHcCCChh
Confidence            999764 4    8999999999999999999999977542222111111111122221 246789999999999999999


Q ss_pred             CCCChhHHHHHHH
Q psy16840        287 SRPDFPTIRARLK  299 (413)
Q Consensus       287 ~Rps~~~i~~~l~  299 (413)
                      +|||+.+++++..
T Consensus       267 ~R~t~~~~l~hp~  279 (486)
T 3mwu_A          267 LRITATQCLEHPW  279 (486)
T ss_dssp             TSCCHHHHHHCHH
T ss_pred             hCcCHHHHhcCHh
Confidence            9999999998643

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.94  E-value=2.2e-28  Score=233.39  Aligned_cols=159  Identities=21%  Similarity=0.248  Sum_probs=109.8

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      +...+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++......    ......||+.|+||
T Consensus       125 ~~~~~~~i~~--qi~--~al~~lH~~~i-vH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aP  195 (371)
T 2xrw_A          125 DHERMSYLLY--QML--CGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----MMTPYVVTRYYRAP  195 (371)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEECTTSCEEECCCCC--------------------CTTCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCe-ecccCCHHHEEEcCCCCEEEEEeeccccccccc----ccCCceecCCccCH
Confidence            3444445555  888  99999999999 999999999999999999999999987653221    12345789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCC--------------------CCC-----
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF--------------------RPN-----  261 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~--------------------~~~-----  261 (413)
                      |++.+..+    +.++|||||||++|+|++|..||.+.+.......+.....                    .+.     
T Consensus       196 E~~~~~~~----~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (371)
T 2xrw_A          196 EVILGMGY----KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS  271 (371)
T ss_dssp             HHHTTCCC----CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCC
T ss_pred             HHhcCCCC----CchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccc
Confidence            99988766    8999999999999999999999976542111000000000                    000     


Q ss_pred             ------------cccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        262 ------------LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       262 ------------~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                                  ........++.+.+|+.+||..||.+|||+.+++++.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp  320 (371)
T 2xrw_A          272 FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP  320 (371)
T ss_dssp             HHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred             hhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence                        0000011367899999999999999999999998764

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.94  E-value=1.6e-28  Score=230.33  Aligned_cols=159  Identities=24%  Similarity=0.361  Sum_probs=119.2

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC---CeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS---RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.   +..+||+|||++......... .......|++.|+|||
T Consensus       142 ~~~i~~--qi~--~al~~LH~~~i-~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE  215 (327)
T 2yfx_A          142 LLHVAR--DIA--CGCQYLEENHF-IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-RKGGCAMLPVKWMPPE  215 (327)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC-------CCGGGSCGGGCCHH
T ss_pred             HHHHHH--HHH--HHHHHHhhCCe-ecCcCCHhHEEEecCCCcceEEECcccccccccccccc-ccCCCcCCCcceeCHh
Confidence            344444  777  99999999999 99999999999984   457999999998765332211 1223446789999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      ++.+..+    +.++||||||+++|+|++ |..||.+............ ...+.   .+..+++.+.+++.+||+.||.
T Consensus       216 ~~~~~~~----~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~l~~li~~~l~~dp~  287 (327)
T 2yfx_A          216 AFMEGIF----TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS-GGRMD---PPKNCPGPVYRIMTQCWQHQPE  287 (327)
T ss_dssp             HHHHCCC----CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-TCCCC---CCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HhcCCCC----CchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhc-CCCCC---CCCCCCHHHHHHHHHHhcCChh
Confidence            9987766    899999999999999998 9999976432211111111 11111   2356889999999999999999


Q ss_pred             CCCChhHHHHHHHhhcc
Q psy16840        287 SRPDFPTIRARLKHMKD  303 (413)
Q Consensus       287 ~Rps~~~i~~~l~~~~~  303 (413)
                      +|||+.++++.|+.+..
T Consensus       288 ~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          288 DRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             GSCCHHHHHHHHHHHHH
T ss_pred             hCcCHHHHHHHHHHHhc
Confidence            99999999999987654

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.94  E-value=1.3e-28  Score=225.86  Aligned_cols=154  Identities=18%  Similarity=0.272  Sum_probs=119.4

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.......    ......||+.|+|||++.
T Consensus       124 ~~~i~~--qi~--~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~  194 (284)
T 2a19_B          124 ALELFE--QIT--KGVDYIHSKKL-INRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG----KRTRSKGTLRYMSPEQIS  194 (284)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEEEETTEEEECCCTTCEESSCCS----CCCCCCSCCTTSCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHhCCe-eeccCCHHHEEEcCCCCEEECcchhheeccccc----cccccCCcccccChhhhc
Confidence            344444  677  99999999999 999999999999999999999999987654322    123446899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +..+    +.++||||||+++|+|++|..||.......  ..... .      ..+..+++.+.+++.+||+.||.+|||
T Consensus       195 ~~~~----~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~~-~------~~~~~~~~~~~~li~~~l~~dp~~Rps  261 (284)
T 2a19_B          195 SQDY----GKEVDLYALGLILAELLHVCDTAFETSKFF--TDLRD-G------IISDIFDKKEKTLLQKLLSKKPEDRPN  261 (284)
T ss_dssp             CSCC----CTHHHHHHHHHHHHHHHSCCSSHHHHHHHH--HHHHT-T------CCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCC----cchhhhHHHHHHHHHHHhcCCcchhHHHHH--HHhhc-c------cccccCCHHHHHHHHHHccCChhhCcC
Confidence            8776    899999999999999999998874321000  00000 0      112457889999999999999999999


Q ss_pred             hhHHHHHHHhhcccCc
Q psy16840        291 FPTIRARLKHMKDGKQ  306 (413)
Q Consensus       291 ~~~i~~~l~~~~~~~~  306 (413)
                      +.++++.|+.+.....
T Consensus       262 ~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          262 TSEILRTLTVWKKSPE  277 (284)
T ss_dssp             HHHHHHHHHHHTC---
T ss_pred             HHHHHHHHHHHhhCCC
Confidence            9999999998876543

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.94  E-value=2.4e-28  Score=229.13  Aligned_cols=144  Identities=17%  Similarity=0.224  Sum_probs=109.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++......   .......||+.|+|||++.+..+    
T Consensus       129 qi~--~al~~lH~~~i-vH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~----  198 (327)
T 3a62_A          129 EIS--MALGHLHQKGI-IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---TVTHTFCGTIEYMAPEILMRSGH----  198 (327)
T ss_dssp             HHH--HHHHHHHHTTC-CCCCCCTTTEEECTTSCEEECCCSCC-------------CTTSSCCTTSCHHHHTTSCC----
T ss_pred             HHH--HHHHHHHhCCE-EcccCCHHHeEECCCCcEEEEeCCcccccccCC---ccccccCCCcCccCHhhCcCCCC----
Confidence            777  99999999999 999999999999999999999999987543221   11234578999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----ChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~  293 (413)
                      +.++|||||||++|+|++|..||.+.+.......+....  .   .++..+++++.++|.+||..||.+||     ++.+
T Consensus       199 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~--~---~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e  273 (327)
T 3a62_A          199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK--L---NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGE  273 (327)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC--C---CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHH
T ss_pred             CCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC--C---CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHH
Confidence            899999999999999999999997644221111111111  1   12356789999999999999999999     6667


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++++
T Consensus       274 ~l~h  277 (327)
T 3a62_A          274 VQAH  277 (327)
T ss_dssp             HHHS
T ss_pred             HHcC
Confidence            7654

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.94  E-value=3.1e-28  Score=231.85  Aligned_cols=157  Identities=20%  Similarity=0.313  Sum_probs=110.7

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++.....      .....||+.|+||
T Consensus       130 ~~~~~~~i~~--qi~--~aL~~LH~~gi-vH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~t~~y~aP  198 (367)
T 2fst_X          130 TDDHVQFLIY--QIL--RGLKYIHSADI-IHRDLKPSNLAVNEDCELKILDFGLARHTADE------MTGYVATRWYRAP  198 (367)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECC---------------------CCCTTCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCe-eeCCCCHhhEEECCCCCEEEeecccccccccc------CCCcCcCcCccCh
Confidence            3444555666  888  99999999999 99999999999999999999999998764321      2345789999999


Q ss_pred             ccccC-CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC--------------------------CCCCCCC
Q psy16840        207 ELLRD-THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE--------------------------DCEEPFR  259 (413)
Q Consensus       207 E~~~~-~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~--------------------------~~~~~~~  259 (413)
                      |++.+ ..+    +.++|||||||++|||++|+.||.+.+.......                          .......
T Consensus       199 E~~~~~~~~----~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~  274 (367)
T 2fst_X          199 EIMLNWMHY----NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK  274 (367)
T ss_dssp             HHHTTCCSC----CTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCC
T ss_pred             HHHcCCcCC----CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCC
Confidence            99877 344    8999999999999999999999987542111000                          0000111


Q ss_pred             CCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       260 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      .........+++.+.+|+.+||..||.+|||+.+++++.
T Consensus       275 ~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp  313 (367)
T 2fst_X          275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA  313 (367)
T ss_dssp             CCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             CCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcCh
Confidence            122223346788999999999999999999999998753

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.94  E-value=2.8e-27  Score=221.56  Aligned_cols=156  Identities=21%  Similarity=0.313  Sum_probs=119.6

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.......    ......||+.|+|||+
T Consensus       120 ~~~~~~~~--qi~--~~l~~lH~~gi-~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~  190 (326)
T 1blx_A          120 ETIKDMMF--QLL--RGLDFLHSHRV-VHRDLKPQNILVTSSGQIKLADFGLARIYSFQM----ALTSVVVTLWYRAPEV  190 (326)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG----GGCCCCCCCTTCCHHH
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCc-eeccCCHHHeEEcCCCCEEEecCcccccccCCC----CccccccccceeCHHH
Confidence            33444555  777  99999999999 999999999999999999999999987653221    1234578999999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC---------------C-------CCCCCCCCCCccccc
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK---------------G-------EDCEEPFRPNLELLR  266 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~---------------~-------~~~~~~~~~~~~~~~  266 (413)
                      +.+..+    +.++||||||+++|+|++|..||.+.......               .       ...............
T Consensus       191 ~~~~~~----~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (326)
T 1blx_A          191 LLQSSY----ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFV  266 (326)
T ss_dssp             HTTCCC----CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTC
T ss_pred             HhcCCC----CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhcc
Confidence            988776    89999999999999999999999764311100               0       000011112223344


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        267 DSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       267 ~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ..+++.+.+++.+||+.||.+|||+.+++++
T Consensus       267 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          267 TDIDELGKDLLLKCLTFNPAKRISAYSALSH  297 (326)
T ss_dssp             CSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            6789999999999999999999999999864

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.94  E-value=1.2e-28  Score=235.95  Aligned_cols=158  Identities=17%  Similarity=0.203  Sum_probs=119.3

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC--CeEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS--RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||++.  ++.+||+|||+++......    ......||+.|+
T Consensus       147 ~~~~~~~i~~--qi~--~aL~~LH~~gi-vHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~----~~~~~~gt~~y~  217 (387)
T 1kob_A          147 SEAEVINYMR--QAC--EGLKHMHEHSI-VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE----IVKVTTATAEFA  217 (387)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS----CEEEECSSGGGC
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCe-eecccchHHeEEecCCCCceEEEecccceecCCCc----ceeeeccCCCcc
Confidence            3444455555  788  99999999999 99999999999974  4789999999998654321    123447899999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      |||++.+..+    +.++|||||||++|+|++|..||.+.+................ ......+++++.++|.+||+.|
T Consensus       218 aPE~~~~~~~----~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~d  292 (387)
T 1kob_A          218 APEIVDREPV----GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD-EDAFSSVSPEAKDFIKNLLQKE  292 (387)
T ss_dssp             CHHHHTTCCB----CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCC-SSTTTTSCHHHHHHHHTTSCSS
T ss_pred             CchhccCCCC----CCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-ccccccCCHHHHHHHHHHcCCC
Confidence            9999988776    8999999999999999999999986542111111111111111 1112467899999999999999


Q ss_pred             CCCCCChhHHHHHH
Q psy16840        285 PESRPDFPTIRARL  298 (413)
Q Consensus       285 P~~Rps~~~i~~~l  298 (413)
                      |.+|||+.++++..
T Consensus       293 P~~Rpt~~ell~hp  306 (387)
T 1kob_A          293 PRKRLTVHDALEHP  306 (387)
T ss_dssp             GGGSCCHHHHHTST
T ss_pred             hhHCcCHHHHhhCc
Confidence            99999999998764

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.94  E-value=7.3e-28  Score=226.70  Aligned_cols=157  Identities=18%  Similarity=0.150  Sum_probs=98.1

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC---CeEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS---RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      ...+..++.  ||+  .||.|||++|+ +||||||+|||++.   ++.+||+|||++......     ......||+.|+
T Consensus       127 ~~~~~~i~~--ql~--~~l~~LH~~~i-vH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~t~~y~  196 (336)
T 3fhr_A          127 EREAAEIMR--DIG--TAIQFLHSHNI-AHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-----ALQTPCYTPYYV  196 (336)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--------------------
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEEEecCCCceEEEeccccceecccc-----ccccCCCCcCcc
Confidence            333444555  777  99999999999 99999999999975   456999999998764322     123456799999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC----CCCCCCCCCCcccccCCChHHHHHHHHHH
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG----EDCEEPFRPNLELLRDSCEPFVLACMRDC  280 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (413)
                      |||++.+..+    +.++||||||+++|+|++|..||.+........    .......... ......+++.+.+++.+|
T Consensus       197 aPE~~~~~~~----~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~  271 (336)
T 3fhr_A          197 APEVLGPEKY----DKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFP-NPEWSEVSEDAKQLIRLL  271 (336)
T ss_dssp             -------CHH----HHHHHHHHHHHHHHHHHHSSCCC---------------------CCC-TTTSTTCCHHHHHHHHHH
T ss_pred             ChhhhCCCCC----CchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccC-chhhccCCHHHHHHHHHH
Confidence            9999977766    899999999999999999999997654322211    0101111111 111246889999999999


Q ss_pred             hccCCCCCCChhHHHHHHH
Q psy16840        281 WAEAPESRPDFPTIRARLK  299 (413)
Q Consensus       281 l~~~P~~Rps~~~i~~~l~  299 (413)
                      |+.||.+|||+.++++...
T Consensus       272 L~~dP~~Rpt~~ell~hp~  290 (336)
T 3fhr_A          272 LKTDPTERLTITQFMNHPW  290 (336)
T ss_dssp             SCSSGGGSCCHHHHHHSHH
T ss_pred             CCCChhHCcCHHHHhcCcc
Confidence            9999999999999998543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.94  E-value=3e-28  Score=227.53  Aligned_cols=169  Identities=23%  Similarity=0.311  Sum_probs=116.5

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccC--CCcccccccCcccccC
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN--DSIGEHQYYRSLLWKA  205 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~gt~~y~a  205 (413)
                      ...+..++.  ||+  .||+|||++|+ +||||||+|||++ ++.+||+|||++........  .........|++.|+|
T Consensus       129 ~~~~~~i~~--qi~--~al~~lH~~~i-~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~a  202 (319)
T 2y4i_B          129 VNKTRQIAQ--EIV--KGMGYLHAKGI-LHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLA  202 (319)
T ss_dssp             SHHHHHHHH--HHH--HHHHHHHHTTC-CCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSC
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCc-cccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccC
Confidence            334444555  777  99999999999 9999999999998 67999999999875432111  1112233468999999


Q ss_pred             cccccCCCC-----CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHH
Q psy16840        206 PELLRDTHA-----PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDC  280 (413)
Q Consensus       206 PE~~~~~~~-----~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (413)
                      ||++.+...     ...++.++||||||+++|+|++|..||.+.......... .....+...  ...+++++.+++.+|
T Consensus       203 PE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~l~~li~~~  279 (319)
T 2y4i_B          203 PEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM-GTGMKPNLS--QIGMGKEISDILLFC  279 (319)
T ss_dssp             HHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHH-HTTCCCCCC--CSSCCTTHHHHHHHH
T ss_pred             hHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh-ccCCCCCCC--cCCCCHHHHHHHHHH
Confidence            999875321     112488999999999999999999999764422111111 011112111  135778899999999


Q ss_pred             hccCCCCCCChhHHHHHHHhhcccC
Q psy16840        281 WAEAPESRPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       281 l~~~P~~Rps~~~i~~~l~~~~~~~  305 (413)
                      |+.||.+|||+.++++.|+.+....
T Consensus       280 l~~~p~~Rpt~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          280 WAFEQEERPTFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             HCSSTTTSCCHHHHHHHHTTC----
T ss_pred             hcCChhhCcCHHHHHHHHHHHHHhh
Confidence            9999999999999999999887653

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.94  E-value=1.2e-28  Score=226.94  Aligned_cols=157  Identities=18%  Similarity=0.294  Sum_probs=106.7

Q ss_pred             hHhhhccccCCchHHhhHhhhcC-CCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRS-PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~-~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      .+..++.  ||+  .||+|||++ |+ +||||||+|||++.++.+||+|||++........    .....||+.|+|||+
T Consensus       110 ~~~~i~~--qi~--~~l~~lH~~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~t~~y~aPE~  180 (290)
T 3fme_A          110 ILGKIAV--SIV--KALEHLHSKLSV-IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA----KDIDAGCKPYMAPER  180 (290)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHHSCC-CCCCCSGGGCEECTTCCEEBCCC-------------------CCCCCCSCHHH
T ss_pred             HHHHHHH--HHH--HHHHHHhhcCCe-ecCCCCHHHEEECCCCCEEEeecCCccccccccc----ccccCCCccccChhh
Confidence            3344444  777  999999998 99 9999999999999999999999999876543221    233468999999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-CCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      +........++.++||||||+++|+|++|..||.......... ...... .+..  ....+++++.+++.+||+.||.+
T Consensus       181 ~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~li~~~l~~~p~~  257 (290)
T 3fme_A          181 INPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP-SPQL--PADKFSAEFVDFTSQCLKKNSKE  257 (290)
T ss_dssp             HSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC-CCCC--CTTTSCHHHHHHHHHHTCSSGGG
T ss_pred             cChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccC-CCCc--ccccCCHHHHHHHHHHhhcChhh
Confidence            7432211223899999999999999999999997532111000 000000 1111  12467889999999999999999


Q ss_pred             CCChhHHHHHH
Q psy16840        288 RPDFPTIRARL  298 (413)
Q Consensus       288 Rps~~~i~~~l  298 (413)
                      |||+.+++++.
T Consensus       258 Rpt~~e~l~hp  268 (290)
T 3fme_A          258 RPTYPELMQHP  268 (290)
T ss_dssp             SCCHHHHTTSH
T ss_pred             CcCHHHHHhCc
Confidence            99999998743

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.94  E-value=9.9e-28  Score=224.35  Aligned_cols=154  Identities=18%  Similarity=0.223  Sum_probs=118.5

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe----EEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW----VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~----~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      +..++.  |++  .||.|||++|+ +||||||+|||++.++    .+||+|||++.......    ......||+.|+||
T Consensus       117 ~~~i~~--qi~--~aL~~lH~~~i-vH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~gt~~y~aP  187 (321)
T 2a2a_A          117 ATSFIK--QIL--DGVNYLHTKKI-AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----EFKNIFGTPEFVAP  187 (321)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC----CCCCCCSCGGGCCH
T ss_pred             HHHHHH--HHH--HHHHHHHhCCe-ecCCCChHHEEEecCCCCcCCEEEccCccceecCccc----cccccCCCCCccCc
Confidence            344444  777  99999999999 9999999999999887    79999999987654321    12345689999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+..+    +.++||||||+++|+|++|..||.+............... ...+.....+++.+.+++.+||..||.
T Consensus       188 E~~~~~~~----~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~  262 (321)
T 2a2a_A          188 EIVNYEPL----GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY-DFDEEFFSHTSELAKDFIRKLLVKETR  262 (321)
T ss_dssp             HHHTTCCC----CTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC-CCCHHHHTTCCHHHHHHHHTTSCSSTT
T ss_pred             ccccCCCC----CCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc-ccChhhhcccCHHHHHHHHHHcCCChh
Confidence            99988776    8999999999999999999999976442211111111111 111223357889999999999999999


Q ss_pred             CCCChhHHHHHH
Q psy16840        287 SRPDFPTIRARL  298 (413)
Q Consensus       287 ~Rps~~~i~~~l  298 (413)
                      +|||+.+++++.
T Consensus       263 ~Rps~~e~l~hp  274 (321)
T 2a2a_A          263 KRLTIQEALRHP  274 (321)
T ss_dssp             TSCCHHHHHHST
T ss_pred             hCcCHHHHhcCc
Confidence            999999998753

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=1.8e-28  Score=232.63  Aligned_cols=159  Identities=17%  Similarity=0.254  Sum_probs=116.7

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||.|||++++ +||||||+|||++.++.+||+|||+++.......  .......||+.|+|||++
T Consensus       160 ~~~~~~~--qi~--~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--~~~~~~~gt~~y~aPE~~  232 (355)
T 1vzo_A          160 EVQIYVG--EIV--LALEHLHKLGI-IYRDIKLENILLDSNGHVVLTDFGLSKEFVADET--ERAYDFCGTIEYMAPDIV  232 (355)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG--GGGCGGGSCCTTCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCc-ccCCCCHHHEEECCCCcEEEeeCCCCeecccCCC--CcccCcccCcCccChhhh
Confidence            3344444  788  99999999999 9999999999999999999999999976533221  123345789999999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .+...  .++.++|||||||++|||++|..||................ ....+..+..+++.+.+||.+||..||.+||
T Consensus       233 ~~~~~--~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  309 (355)
T 1vzo_A          233 RGGDS--GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI-LKSEPPYPQEMSALAKDLIQRLLMKDPKKRL  309 (355)
T ss_dssp             TTCC-----CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHH-HHCCCCCCTTSCHHHHHHHHHHTCSSGGGST
T ss_pred             cCCCC--CCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHH-hccCCCCCcccCHHHHHHHHHHhhhCHHHhc
Confidence            86432  23889999999999999999999997543221111000000 0001112356888999999999999999999


Q ss_pred             -----ChhHHHHHH
Q psy16840        290 -----DFPTIRARL  298 (413)
Q Consensus       290 -----s~~~i~~~l  298 (413)
                           ++.++++..
T Consensus       310 ~~~~~s~~ell~h~  323 (355)
T 1vzo_A          310 GCGPRDADEIKEHL  323 (355)
T ss_dssp             TSSTTTHHHHHTSG
T ss_pred             CCCCCCHHHHHcCc
Confidence                 888887654

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.94  E-value=4.9e-28  Score=237.26  Aligned_cols=152  Identities=20%  Similarity=0.303  Sum_probs=119.1

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.......    .....+||+.|+|||++
T Consensus       117 ~~~~i~~--qi~--~aL~~LH~~gi-vHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~  187 (476)
T 2y94_A          117 ESRRLFQ--QIL--SGVDYCHRHMV-VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----FLRTSCGSPNYAAPEVI  187 (476)
T ss_dssp             HHHHHHH--HHH--HHHHHHHTTTE-ECSCCSGGGEEECTTCCEEECCCSSCEECCTTC----CBCCCCSCSTTCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCC-CcccccHHHEEEecCCCeEEEeccchhhccccc----cccccCCCcCeEChhhc
Confidence            3344445  777  99999999999 999999999999999999999999998654321    13345799999999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .+..+.   +.++|||||||++|+|++|..||.+.........+.....     ..+..+++++.+||.+||..||.+||
T Consensus       188 ~~~~~~---~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~~Li~~~L~~dP~~Rp  259 (476)
T 2y94_A          188 SGRLYA---GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIF-----YTPQYLNPSVISLLKHMLQVDPMKRA  259 (476)
T ss_dssp             TTCCBC---SHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCC-----CCCTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred             cCCCCC---CCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCc-----CCCccCCHHHHHHHHHHcCCCchhCc
Confidence            887542   6899999999999999999999986542221111111111     12346788999999999999999999


Q ss_pred             ChhHHHHHH
Q psy16840        290 DFPTIRARL  298 (413)
Q Consensus       290 s~~~i~~~l  298 (413)
                      |+.+++++.
T Consensus       260 t~~eil~hp  268 (476)
T 2y94_A          260 TIKDIREHE  268 (476)
T ss_dssp             CHHHHHTCH
T ss_pred             CHHHHHhCH
Confidence            999999753

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.94  E-value=5e-28  Score=225.16  Aligned_cols=161  Identities=19%  Similarity=0.301  Sum_probs=112.9

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||.|||++|+ +||||||+||+++.++.+||+|||++........   ......|++.|+|||++
T Consensus       137 ~~~~i~~--qi~--~~l~~LH~~~i-~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~  208 (310)
T 2wqm_A          137 TVWKYFV--QLC--SALEHMHSRRV-MHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT---AAHSLVGTPYYMSPERI  208 (310)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTSCEEECCC---------------------CCSSCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHhhCCe-eCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc---cccccCCCeeEeChHHh
Confidence            3344444  777  99999999999 9999999999999999999999999876533211   12344689999999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC--CCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK--GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      .+..+    +.++||||||+++|+|++|..||.+.......  ........ +..  ....+++++.+++.+||+.||.+
T Consensus       209 ~~~~~----~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~l~~li~~~l~~dp~~  281 (310)
T 2wqm_A          209 HENGY----NFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY-PPL--PSDHYSEELRQLVNMCINPDPEK  281 (310)
T ss_dssp             TTCCC----CHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCS-CCC--CTTTSCHHHHHHHHHHTCSSGGG
T ss_pred             CCCCC----CchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccC-CCC--cccccCHHHHHHHHHHcCCChhh
Confidence            88766    89999999999999999999999764321100  00001111 111  12467899999999999999999


Q ss_pred             CCChhHHHHHHHhhcccC
Q psy16840        288 RPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       288 Rps~~~i~~~l~~~~~~~  305 (413)
                      |||+.++++.|+++....
T Consensus       282 Rps~~~il~~l~~l~~~~  299 (310)
T 2wqm_A          282 RPDVTYVYDVAKRMHACT  299 (310)
T ss_dssp             SCCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhh
Confidence            999999999998886543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.94  E-value=3.2e-28  Score=228.04  Aligned_cols=158  Identities=16%  Similarity=0.292  Sum_probs=110.2

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++........   ......||+.|+|||++
T Consensus       130 ~~~~i~~--qi~--~~l~~lH~~~i-vH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~  201 (326)
T 2x7f_A          130 WIAYICR--EIL--RGLSHLHQHKV-IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG---RRNTFIGTPYWMAPEVI  201 (326)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTC-CCCCCSGGGEEECTTCCEEECCCTTTC----------------CCGGGCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCc-cccCCcHHHEEEcCCCCEEEeeCcCceecCcCcc---ccccccCCccccChhhh
Confidence            3344455  777  99999999999 9999999999999999999999999876532211   12345689999999998


Q ss_pred             cCCCC-CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        210 RDTHA-PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       210 ~~~~~-~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      ..... ...++.++|||||||++|+|++|..||.+............... +  ......+++.+.++|.+||..||.+|
T Consensus       202 ~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~l~~li~~~l~~dp~~R  278 (326)
T 2x7f_A          202 ACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA-P--RLKSKKWSKKFQSFIESCLVKNHSQR  278 (326)
T ss_dssp             C--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-C--CCSCSCSCHHHHHHHHHHCCSSGGGS
T ss_pred             ccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc-c--cCCccccCHHHHHHHHHHhccChhhC
Confidence            73211 11238999999999999999999999976432111110000000 1  11125678999999999999999999


Q ss_pred             CChhHHHHHH
Q psy16840        289 PDFPTIRARL  298 (413)
Q Consensus       289 ps~~~i~~~l  298 (413)
                      ||+.++++..
T Consensus       279 ps~~~ll~hp  288 (326)
T 2x7f_A          279 PATEQLMKHP  288 (326)
T ss_dssp             CCHHHHHTSH
T ss_pred             CCHHHHhhCh
Confidence            9999998753

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.94  E-value=6.2e-28  Score=223.55  Aligned_cols=161  Identities=16%  Similarity=0.268  Sum_probs=113.3

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC--CcccccccCcccccC
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND--SIGEHQYYRSLLWKA  205 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~gt~~y~a  205 (413)
                      ...+..++.  ||+  .||.|||++|+ +||||||+||+++.++.+||+|||++.........  ........||+.|+|
T Consensus       120 ~~~~~~i~~--qi~--~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~a  194 (303)
T 2vwi_A          120 ESTIATILR--EVL--EGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA  194 (303)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTC-CCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCC
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCC-CCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccC
Confidence            333444445  777  99999999999 99999999999999999999999998765432111  111234568999999


Q ss_pred             cccccC-CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC---CCCC--CCCCcccccCCChHHHHHHHHH
Q psy16840        206 PELLRD-THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED---CEEP--FRPNLELLRDSCEPFVLACMRD  279 (413)
Q Consensus       206 PE~~~~-~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~l~~li~~  279 (413)
                      ||++.+ ..+    +.++||||||+++|+|++|..||............   ....  ...........+++.+.+++.+
T Consensus       195 PE~~~~~~~~----~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  270 (303)
T 2vwi_A          195 PEVMEQVRGY----DFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISL  270 (303)
T ss_dssp             HHHHHHHHCC----CTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHH
T ss_pred             HHHhccccCC----CchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHH
Confidence            999875 334    88999999999999999999999764422111000   0000  0001112235678899999999


Q ss_pred             HhccCCCCCCChhHHHHH
Q psy16840        280 CWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       280 cl~~~P~~Rps~~~i~~~  297 (413)
                      ||+.||.+|||+.++++.
T Consensus       271 ~l~~dp~~Rps~~~ll~h  288 (303)
T 2vwi_A          271 CLQKDPEKRPTAAELLRH  288 (303)
T ss_dssp             HCCSSGGGSCCHHHHHTS
T ss_pred             HccCChhhCcCHHHHhhC
Confidence            999999999999999864

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.94  E-value=4.6e-28  Score=247.63  Aligned_cols=138  Identities=21%  Similarity=0.274  Sum_probs=112.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|| |||||||+|||++.++.+||+|||+++......   ......+||+.|+|||++.+..+    
T Consensus       450 qi~--~aL~~LH~~gI-iHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---~~~~~~~GT~~Y~APE~l~~~~~----  519 (674)
T 3pfq_A          450 EIA--IGLFFLQSKGI-IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKTFCGTPDYIAPEIIAYQPY----  519 (674)
T ss_dssp             HHH--HHHHHHHHTSE-ECCCCCSTTEEECSSSCEEECCCTTCEECCCTT---CCBCCCCSCSSSCCHHHHTCCCB----
T ss_pred             HHH--HHHHHHHhCCe-EeccCChhhEEEcCCCcEEEeecceeeccccCC---cccccccCCCcccCHhhhcCCCC----
Confidence            777  99999999999 999999999999999999999999997532221   22445689999999999988877    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      +.++|||||||++|||++|..||.+.+..+....+.....     .++..+++++.+||.+||+.||.+||++
T Consensus       520 ~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          520 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV-----AYPKSMSKEAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             STHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCC-----CCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred             CccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC-----CCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence            9999999999999999999999987543222222222111     1235788999999999999999999998

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.94  E-value=2e-28  Score=231.96  Aligned_cols=166  Identities=21%  Similarity=0.282  Sum_probs=118.4

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC-CcccccccCcccccC
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSLLWKA  205 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~a  205 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++........ ........||+.|+|
T Consensus       122 ~~~~~~~i~~--qi~--~~l~~LH~~~i-vH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a  196 (351)
T 3mi9_A          122 TLSEIKRVMQ--MLL--NGLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRP  196 (351)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCC
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCe-eCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccC
Confidence            3344455555  888  99999999999 99999999999999999999999999865432211 122344578999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC------CCCCCCCCCCcc----------------
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG------EDCEEPFRPNLE----------------  263 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~------~~~~~~~~~~~~----------------  263 (413)
                      ||++.+...   ++.++|||||||++|+|++|..||.+........      ........+...                
T Consensus       197 PE~~~~~~~---~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (351)
T 3mi9_A          197 PELLLGERD---YGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKR  273 (351)
T ss_dssp             HHHHTTCCS---CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCC
T ss_pred             chhhcCCCC---CCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhccccccccccc
Confidence            999876432   2899999999999999999999997643111000      000000000000                


Q ss_pred             cc-----cCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHh
Q psy16840        264 LL-----RDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH  300 (413)
Q Consensus       264 ~~-----~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~  300 (413)
                      ..     ....++.+.+||.+||+.||.+|||+.++++.-.-
T Consensus       274 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f  315 (351)
T 3mi9_A          274 KVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF  315 (351)
T ss_dssp             CHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             CHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCc
Confidence            00     00136789999999999999999999999886543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.94  E-value=1.3e-28  Score=234.00  Aligned_cols=153  Identities=15%  Similarity=0.209  Sum_probs=112.6

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC-------------------------CeEEEEecccccccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-------------------------RWVLQVTDFGLHELR  184 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-------------------------~~~~kl~Dfg~a~~~  184 (413)
                      .+..++.  ||+  .||+|||++|+ +||||||+|||++.                         ++.+||+|||++...
T Consensus       138 ~~~~i~~--qi~--~aL~~LH~~~i-vHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~  212 (360)
T 3llt_A          138 DIKLYCI--EIL--KALNYLRKMSL-THTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFK  212 (360)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEET
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCe-eeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceec
Confidence            3444455  777  99999999999 99999999999975                         788999999998764


Q ss_pred             ccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-----------
Q psy16840        185 HCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED-----------  253 (413)
Q Consensus       185 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~-----------  253 (413)
                      ...      .....||+.|+|||++.+..+    +.++|||||||++|+|++|+.||.+..........           
T Consensus       213 ~~~------~~~~~gt~~y~aPE~~~~~~~----~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~  282 (360)
T 3llt_A          213 SDY------HGSIINTRQYRAPEVILNLGW----DVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNM  282 (360)
T ss_dssp             TSC------CCSCCSCGGGCCHHHHTTCCC----CTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHH
T ss_pred             CCC------CcCccCcccccCcHHHcCCCC----CCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHH
Confidence            321      234578999999999988776    99999999999999999999999764311100000           


Q ss_pred             -----------------CCCCCCC-------------CcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        254 -----------------CEEPFRP-------------NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       254 -----------------~~~~~~~-------------~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                                       ....+..             ..+......++.+.+||.+||+.||.+|||+.+++++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~h  356 (360)
T 3llt_A          283 LYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKH  356 (360)
T ss_dssp             HHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence                             0000000             0000111234778899999999999999999998754

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.94  E-value=1.8e-27  Score=228.08  Aligned_cols=159  Identities=19%  Similarity=0.262  Sum_probs=118.3

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEc-CCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVT-SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||++ .++.+||+|||+++......    ......||+.|+|
T Consensus       139 ~~~~~~~i~~--qi~--~aL~~LH~~gi-~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~t~~y~a  209 (383)
T 3eb0_A          139 PMNLISIYIY--QLF--RAVGFIHSLGI-CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE----PSVAYICSRFYRA  209 (383)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHTTTE-ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS----CCCCCCCCSSCCC
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCcC-ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC----CCcCcccCCCccC
Confidence            3334445555  777  99999999999 9999999999998 57899999999998653322    1234567999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC------------------------CCCCCCCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED------------------------CEEPFRPN  261 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~------------------------~~~~~~~~  261 (413)
                      ||++.+...   ++.++||||+||++|||++|+.||.+....+....+                        ........
T Consensus       210 PE~~~~~~~---~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~  286 (383)
T 3eb0_A          210 PELMLGATE---YTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDW  286 (383)
T ss_dssp             HHHHTTCSS---CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCH
T ss_pred             HHHhcCCCC---CCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccH
Confidence            999876542   289999999999999999999999875421110000                        00000111


Q ss_pred             cccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ...++..+++++.+||.+||..||.+|||+.+++++
T Consensus       287 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (383)
T 3eb0_A          287 RKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAH  322 (383)
T ss_dssp             HHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            112345688999999999999999999999999864

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.94  E-value=3.7e-28  Score=223.08  Aligned_cols=154  Identities=18%  Similarity=0.216  Sum_probs=116.4

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe---EEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..++.  |++  .||.|||++|+ +||||||+||+++.++   .+||+|||++.......    ......||+.|+|||
T Consensus       107 ~~~~~~--~i~--~~l~~lH~~~i-~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE  177 (284)
T 3kk8_A          107 ASHCIQ--QIL--ESIAYCHSNGI-VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----AWHGFAGTPGYLSPE  177 (284)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTE-ECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC----BCCCSCSCGGGCCHH
T ss_pred             HHHHHH--HHH--HHHHHHHHCCc-CcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc----cccCCCCCcCCcCch
Confidence            344444  777  99999999999 9999999999997654   49999999987653221    123457899999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      ++.+..+    +.++||||||+++|+|++|..||.+...................+ ....+++++.+++.+||+.||.+
T Consensus       178 ~~~~~~~----~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~  252 (284)
T 3kk8_A          178 VLKKDPY----SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP-EWDTVTPEAKSLIDSMLTVNPKK  252 (284)
T ss_dssp             HHTTCCB----CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT-TTTTSCHHHHHHHHHHSCSSTTT
T ss_pred             hhcCCCC----CcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCch-hhcccCHHHHHHHHHHcccChhh
Confidence            9988776    899999999999999999999997643221111111111111111 12467899999999999999999


Q ss_pred             CCChhHHHHHH
Q psy16840        288 RPDFPTIRARL  298 (413)
Q Consensus       288 Rps~~~i~~~l  298 (413)
                      |||+.++++..
T Consensus       253 Rps~~~~l~h~  263 (284)
T 3kk8_A          253 RITADQALKVP  263 (284)
T ss_dssp             SCCHHHHTTSH
T ss_pred             CCCHHHHhcCc
Confidence            99999998754

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.94  E-value=7.3e-28  Score=226.23  Aligned_cols=161  Identities=21%  Similarity=0.254  Sum_probs=114.8

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++........   ......||+.|+||
T Consensus       122 ~~~~~~~~~~--qi~--~~l~~LH~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~t~~y~aP  193 (331)
T 4aaa_A          122 DYQVVQKYLF--QII--NGIGFCHSHNI-IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---VYDDEVATRWYRAP  193 (331)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTSCEEECCCTTC---------------CCCCCTTCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCE-EccCcChheEEEcCCCcEEEEeCCCceeecCCcc---ccCCCcCCccccCc
Confidence            3344445555  788  99999999999 9999999999999999999999999876533221   12344689999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--------------------------CCCCCCCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--------------------------EDCEEPFRP  260 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--------------------------~~~~~~~~~  260 (413)
                      |++.+...   ++.++|||||||++|+|++|..||.+........                          .........
T Consensus       194 E~~~~~~~---~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (331)
T 4aaa_A          194 ELLVGDVK---YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKERE  270 (331)
T ss_dssp             HHHTTCTT---CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCC
T ss_pred             ccccCCCC---cchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccc
Confidence            99977522   2899999999999999999999997654111000                          000001111


Q ss_pred             CcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       261 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ......+.+++.+.+||.+||+.||.+|||+.++++.-
T Consensus       271 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp  308 (331)
T 4aaa_A          271 PLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHD  308 (331)
T ss_dssp             CHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred             hhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCc
Confidence            11222346789999999999999999999999998753

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.94  E-value=3.4e-28  Score=227.01  Aligned_cols=171  Identities=15%  Similarity=0.194  Sum_probs=122.1

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC------cccccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS------IGEHQYYRSLL  202 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~------~~~~~~~gt~~  202 (413)
                      ..+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++..........      .......||+.
T Consensus       134 ~~~~~i~~--qi~--~~L~~LH~~~i-vH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  208 (317)
T 2buj_A          134 DQILWLLL--GIC--RGLEAIHAKGY-AHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS  208 (317)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGG
T ss_pred             HHHHHHHH--HHH--HHHHHHHhCCc-ccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcc
Confidence            33444444  777  99999999999 999999999999999999999999987543211110      00123457899


Q ss_pred             ccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC-CCCCCCCCCCCcccccCCChHHHHHHHHHHh
Q psy16840        203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK-GEDCEEPFRPNLELLRDSCEPFVLACMRDCW  281 (413)
Q Consensus       203 y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (413)
                      |+|||++.+... ..++.++||||||+++|+|++|..||......... ...........   ....+++.+.+++.+||
T Consensus       209 y~aPE~~~~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l  284 (317)
T 2buj_A          209 YRAPELFSVQSH-CVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIP---QSPRHSSALWQLLNSMM  284 (317)
T ss_dssp             GCCGGGSSCCSE-EEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CC---CCTTSCHHHHHHHHHHT
T ss_pred             cCCHhHhccCCC-cCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCC---ccccCCHHHHHHHHHHh
Confidence            999999876541 01278999999999999999999999542100000 00000011111   12467889999999999


Q ss_pred             ccCCCCCCChhHHHHHHHhhcccCccc
Q psy16840        282 AEAPESRPDFPTIRARLKHMKDGKQKN  308 (413)
Q Consensus       282 ~~~P~~Rps~~~i~~~l~~~~~~~~~~  308 (413)
                      +.||.+|||+.++++.|+.+.......
T Consensus       285 ~~dp~~Rps~~~ll~~L~~~~~~~~~~  311 (317)
T 2buj_A          285 TVDPHQRPHIPLLLSQLEALQPPAPGQ  311 (317)
T ss_dssp             CSSGGGSCCHHHHHHHHHHTCCCCCC-
T ss_pred             hcChhhCCCHHHHHHHhhhcCCCCCCC
Confidence            999999999999999999987765543

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.94  E-value=2e-27  Score=221.14  Aligned_cols=160  Identities=18%  Similarity=0.227  Sum_probs=113.2

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  |++  .||.|||++|+ +||||||+|||++.++.+||+|||++........   ......||+.|+||
T Consensus       100 ~~~~~~~i~~--~l~--~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aP  171 (311)
T 4agu_A          100 PEHLVKSITW--QTL--QAVNFCHKHNC-IHRDVKPENILITKHSVIKLCDFGFARLLTGPSD---YYDDEVATRWYRSP  171 (311)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECC---------------GGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCC-cCCCCChhhEEEcCCCCEEEeeCCCchhccCccc---ccCCCcCCccccCh
Confidence            3344445555  777  99999999999 9999999999999999999999999876542221   12344689999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--------------------------CCCCCCCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--------------------------EDCEEPFRP  260 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--------------------------~~~~~~~~~  260 (413)
                      |++.+...   ++.++||||||+++|+|++|..||.+........                          .........
T Consensus       172 E~~~~~~~---~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (311)
T 4agu_A          172 ELLVGDTQ---YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDME  248 (311)
T ss_dssp             HHHHTCSC---CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCC
T ss_pred             HHHhcCCC---CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccc
Confidence            99976332   2899999999999999999999997653211000                          000000001


Q ss_pred             CcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       261 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ......+.+++.+.+++.+||+.||.+|||+.+++++
T Consensus       249 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          249 PLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             CHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             hhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            1111224678899999999999999999999999875

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.94  E-value=3.5e-28  Score=222.77  Aligned_cols=150  Identities=15%  Similarity=0.226  Sum_probs=114.7

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++......     ......|++.|+|||.+.
T Consensus       111 ~~~~~~--qi~--~~l~~LH~~~i-~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~  180 (279)
T 3fdn_A          111 TATYIT--ELA--NALSYCHSKRV-IHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTDLCGTLDYLPPEMIE  180 (279)
T ss_dssp             HHHHHH--HHH--HHHHHHHTTTC-EECCCCGGGEEECTTSCEEECSCCEESCC-------------CCCCTTCCHHHHT
T ss_pred             HHHHHH--HHH--HHHHHHHhCCE-ecccCChHhEEEcCCCCEEEEeccccccCCcc-----cccccCCCCCccCHhHhc
Confidence            344444  777  99999999999 99999999999999999999999998553221     123457899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +..+    +.++||||||+++|+|++|..||................     ...+..+++.+.+++.+||+.||.+|||
T Consensus       181 ~~~~----~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps  251 (279)
T 3fdn_A          181 GRMH----DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE-----FTFPDFVTEGARDLISRLLKHNPSQRPM  251 (279)
T ss_dssp             TCCC----CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC-----CCCCTTSCHHHHHHHHHHCCSSGGGSCC
T ss_pred             cCCC----CccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCC-----CCCCCcCCHHHHHHHHHHhccChhhCCC
Confidence            8776    899999999999999999999997643211111110000     1123567889999999999999999999


Q ss_pred             hhHHHHHHH
Q psy16840        291 FPTIRARLK  299 (413)
Q Consensus       291 ~~~i~~~l~  299 (413)
                      +.+++++..
T Consensus       252 ~~e~l~h~~  260 (279)
T 3fdn_A          252 LREVLEHPW  260 (279)
T ss_dssp             HHHHHHCHH
T ss_pred             HHHHhhCcc
Confidence            999997654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.94  E-value=3.2e-28  Score=231.36  Aligned_cols=157  Identities=18%  Similarity=0.223  Sum_probs=107.6

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeE--EEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWV--LQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~--~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ..+..++.  ||+  .||+|||++|+ +||||||+|||++.++.  +||+|||+++.....    .......||+.|+||
T Consensus       116 ~~~~~i~~--ql~--~~L~~LH~~~i-vH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aP  186 (361)
T 3uc3_A          116 DEARFFFQ--QLL--SGVSYCHSMQI-CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH----SQPKSTVGTPAYIAP  186 (361)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTC-CSCCCCGGGEEECSSSSCCEEECCCCCC-------------------CTTSCH
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCc-ccCCCCHHHEEEcCCCCceEEEeecCcccccccc----CCCCCCcCCCCcCCh
Confidence            33444555  788  99999999999 99999999999987764  999999998743221    112345789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC----CCCCCCCCCcccccCCChHHHHHHHHHHhc
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE----DCEEPFRPNLELLRDSCEPFVLACMRDCWA  282 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (413)
                      |++.+..+.   +.++|||||||++|+|++|..||.+.........    ........  + ....+++.+.+||.+||.
T Consensus       187 E~~~~~~~~---~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~s~~~~~li~~~L~  260 (361)
T 3uc3_A          187 EVLLRQEYD---GKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSI--P-DDIRISPECCHLISRIFV  260 (361)
T ss_dssp             HHHHCSSCC---HHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCC--C-TTSCCCHHHHHHHHHHSC
T ss_pred             hhhcCCCCC---CCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCC--C-CcCCCCHHHHHHHHHHcc
Confidence            999887651   3448999999999999999999976442221110    00011110  0 013578899999999999


Q ss_pred             cCCCCCCChhHHHHHHHh
Q psy16840        283 EAPESRPDFPTIRARLKH  300 (413)
Q Consensus       283 ~~P~~Rps~~~i~~~l~~  300 (413)
                      .||.+|||+.+++++..-
T Consensus       261 ~dP~~Rps~~ell~hp~f  278 (361)
T 3uc3_A          261 ADPATRISIPEIKTHSWF  278 (361)
T ss_dssp             SCTTTSCCHHHHHTSHHH
T ss_pred             CChhHCcCHHHHHhCcch
Confidence            999999999999986543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.94  E-value=2.5e-28  Score=229.01  Aligned_cols=158  Identities=20%  Similarity=0.233  Sum_probs=117.1

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC---CeEEEEeccccccccccccCCCcccccccCcccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS---RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||++.   ++.+||+|||+++......    ......||+.|
T Consensus       129 ~~~~~~~i~~--ql~--~~L~~LH~~gi-vH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~----~~~~~~gt~~y  199 (327)
T 3lm5_A          129 SENDVIRLIK--QIL--EGVYYLHQNNI-VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC----ELREIMGTPEY  199 (327)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------------CCCGGG
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCe-ecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc----ccccccCCcCc
Confidence            3344445555  888  99999999999 99999999999997   7899999999998654221    12345789999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      +|||++.+..+    +.++||||||+++|+|++|..||.+................. .......+++.+.++|.+||+.
T Consensus       200 ~aPE~~~~~~~----~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~li~~~L~~  274 (327)
T 3lm5_A          200 LAPEILNYDPI----TTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY-SEETFSSVSQLATDFIQSLLVK  274 (327)
T ss_dssp             CCHHHHTTCCC----CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC-CTTTTTTSCHHHHHHHHHHSCS
T ss_pred             cCCeeecCCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhccccc-CchhhcccCHHHHHHHHHHcCC
Confidence            99999988776    899999999999999999999997644221111110001111 1112246889999999999999


Q ss_pred             CCCCCCChhHHHHHH
Q psy16840        284 APESRPDFPTIRARL  298 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l  298 (413)
                      ||.+|||+.++++..
T Consensus       275 dP~~Rpt~~~ll~h~  289 (327)
T 3lm5_A          275 NPEKRPTAEICLSHS  289 (327)
T ss_dssp             SGGGSCCHHHHTTCG
T ss_pred             ChhhCcCHHHHhCCH
Confidence            999999999998753

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.94  E-value=1.1e-27  Score=220.66  Aligned_cols=151  Identities=20%  Similarity=0.354  Sum_probs=115.0

Q ss_pred             hHhhhccccCCchHHhhHhhhcCC--CcccCCCCCCCeEEc-CCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSP--IGCHGNLKSSNCVVT-SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~--iiiHrdlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..++.  ||+  .||.|||+++  + +||||||+|||++ .++.+||+|||++......     ......||+.|+||
T Consensus       130 ~~~~~~~--qi~--~~l~~lH~~~~~i-~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~t~~y~aP  199 (290)
T 1t4h_A          130 VLRSWCR--QIL--KGLQFLHTRTPPI-IHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-----FAKAVIGTPEFMAP  199 (290)
T ss_dssp             HHHHHHH--HHH--HHHHHHHTSSSCC-CCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT-----SBEESCSSCCCCCG
T ss_pred             HHHHHHH--HHH--HHHHHHHcCCCCE-EECCCCHHHEEEECCCCCEEEeeCCCccccccc-----ccccccCCcCcCCH
Confidence            3344444  777  9999999998  8 9999999999998 7889999999998654321     22345689999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+. +    +.++||||||+++|+|++|..||.+................+  ...+...++++.++|.+||+.||.
T Consensus       200 E~~~~~-~----~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~  272 (290)
T 1t4h_A          200 EMYEEK-Y----DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIPEVKEIIEGCIRQNKD  272 (290)
T ss_dssp             GGGGTC-C----CTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--GGGGGCCCHHHHHHHHHHSCSSGG
T ss_pred             HHHhcc-C----CCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc--cccCCCCCHHHHHHHHHHccCChh
Confidence            988754 4    899999999999999999999997643221111111111111  123356778999999999999999


Q ss_pred             CCCChhHHHHH
Q psy16840        287 SRPDFPTIRAR  297 (413)
Q Consensus       287 ~Rps~~~i~~~  297 (413)
                      +|||+.+++++
T Consensus       273 ~Rps~~ell~h  283 (290)
T 1t4h_A          273 ERYSIKDLLNH  283 (290)
T ss_dssp             GSCCHHHHHTS
T ss_pred             hCCCHHHHhhC
Confidence            99999999864

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.94  E-value=6e-28  Score=229.84  Aligned_cols=161  Identities=19%  Similarity=0.195  Sum_probs=119.0

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||+.|+ +||||||+|||++.++.+||+|||++.......    ......||+.|+||
T Consensus       198 ~~~~~~~i~~--qi~--~~L~~LH~~gi-~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~----~~~~~~gt~~y~aP  268 (365)
T 2y7j_A          198 SEKETRSIMR--SLL--EAVSFLHANNI-VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----KLRELCGTPGYLAP  268 (365)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCCTTCEECCTTC----CBCCCCSCGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCe-ecCCCCHHHEEECCCCCEEEEecCcccccCCCc----ccccCCCCCCccCh
Confidence            3334445555  888  99999999999 999999999999999999999999987654321    12345789999999


Q ss_pred             ccccCCCC--CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        207 ELLRDTHA--PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       207 E~~~~~~~--~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      |++.+...  ...++.++|||||||++|+|++|..||.+.........+.........+ ....+++.+.+++.+||+.|
T Consensus       269 E~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~li~~~L~~d  347 (365)
T 2y7j_A          269 EILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSP-EWDDRSSTVKDLISRLLQVD  347 (365)
T ss_dssp             HHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHH-HHSSSCHHHHHHHHHHSCSS
T ss_pred             hhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCc-ccccCCHHHHHHHHHHcCCC
Confidence            99864321  1123889999999999999999999997643211111111111111111 12467889999999999999


Q ss_pred             CCCCCChhHHHHH
Q psy16840        285 PESRPDFPTIRAR  297 (413)
Q Consensus       285 P~~Rps~~~i~~~  297 (413)
                      |.+|||+.++++.
T Consensus       348 P~~Rps~~ell~h  360 (365)
T 2y7j_A          348 PEARLTAEQALQH  360 (365)
T ss_dssp             TTTSCCHHHHHHS
T ss_pred             hhHCcCHHHHhcC
Confidence            9999999999874

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.94  E-value=5.8e-28  Score=230.53  Aligned_cols=158  Identities=19%  Similarity=0.314  Sum_probs=117.1

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +....+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.....      .....||+.|+|
T Consensus       141 ~~~~~~~~i~~--qi~--~aL~~LH~~~i-vH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~------~~~~~~t~~y~a  209 (371)
T 4exu_A          141 FSEEKIQYLVY--QML--KGLKYIHSAGV-VHRDLKPGNLAVNEDCELKILDFGLARHADAE------MTGYVVTRWYRA  209 (371)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEECTTCCEEECSTTCC--------------CTTCCCTTSC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCC-cCCCcCHHHeEECCCCCEEEEecCcccccccC------cCCcccCccccC
Confidence            34444555555  888  99999999999 99999999999999999999999998754321      234568999999


Q ss_pred             cccccC-CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC--------------------------CCCCCC
Q psy16840        206 PELLRD-THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE--------------------------DCEEPF  258 (413)
Q Consensus       206 PE~~~~-~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~--------------------------~~~~~~  258 (413)
                      ||++.+ ..+    +.++|||||||++|+|++|..||.+.+..+....                          ......
T Consensus       210 PE~~~~~~~~----~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (371)
T 4exu_A          210 PEVILSWMHY----NQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP  285 (371)
T ss_dssp             HHHHSCCSCC----CTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCC
T ss_pred             HHHhcCCCCC----CcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCc
Confidence            999877 444    8999999999999999999999976431110000                          000111


Q ss_pred             CCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ..........+++.+.+||.+||+.||.+|||+.++++..
T Consensus       286 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  325 (371)
T 4exu_A          286 RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP  325 (371)
T ss_dssp             CCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred             chhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCc
Confidence            1222233356789999999999999999999999998763

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.94  E-value=4e-28  Score=236.34  Aligned_cols=157  Identities=20%  Similarity=0.250  Sum_probs=107.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-------------eEEEEeccccccccccccCCC-cccccccCccccc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-------------WVLQVTDFGLHELRHCAENDS-IGEHQYYRSLLWK  204 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-------------~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~  204 (413)
                      ||+  .||+|||++|+ +||||||+|||++.+             +.+||+|||+++......... .......||+.|+
T Consensus       123 qi~--~aL~~LH~~~i-vHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~  199 (434)
T 2rio_A          123 QIA--SGVAHLHSLKI-IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWR  199 (434)
T ss_dssp             HHH--HHHHHHHHTTE-ECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTS
T ss_pred             HHH--HHHHHHHHCCc-cccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCcc
Confidence            777  99999999999 999999999999754             489999999998764332211 1123457899999


Q ss_pred             CcccccCCCC---CCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHH
Q psy16840        205 APELLRDTHA---PIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDC  280 (413)
Q Consensus       205 aPE~~~~~~~---~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (413)
                      |||++.+...   ...++.++|||||||++|||++ |..||.+.........................+++++.++|.+|
T Consensus       200 aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~  279 (434)
T 2rio_A          200 APELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQM  279 (434)
T ss_dssp             CHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHH
T ss_pred             CHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccccchHHHHHHHHHH
Confidence            9999976210   1134899999999999999999 99999754321100000000000000001134678999999999


Q ss_pred             hccCCCCCCChhHHHHHH
Q psy16840        281 WAEAPESRPDFPTIRARL  298 (413)
Q Consensus       281 l~~~P~~Rps~~~i~~~l  298 (413)
                      |+.||.+|||+.+++++.
T Consensus       280 L~~dP~~Rps~~eil~hp  297 (434)
T 2rio_A          280 IDHDPLKRPTAMKVLRHP  297 (434)
T ss_dssp             TCSSGGGSCCHHHHHTSG
T ss_pred             hhCChhhCCCHHHHHhCC
Confidence            999999999999998643

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.94  E-value=2e-27  Score=234.85  Aligned_cols=155  Identities=20%  Similarity=0.291  Sum_probs=118.6

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEE---cCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVV---TSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..++.  ||+  .||.|||++|+ +||||||+|||+   +.++.+||+|||++.......    ......||+.|+||
T Consensus       127 ~~~~i~~--qi~--~~l~~lH~~~i-vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aP  197 (484)
T 3nyv_A          127 DAARIIR--QVL--SGITYMHKNKI-VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK----KMKDKIGTAYYIAP  197 (484)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC----SHHHHTTGGGTCCH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCe-eeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc----ccccCCCCccccCc
Confidence            3444555  788  99999999999 999999999999   467899999999987653221    23345789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+. +    +.++|||||||++|+|++|..||.+.+.......+.........+. ...+++.+.+||.+||+.||.
T Consensus       198 E~~~~~-~----~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~~dp~  271 (484)
T 3nyv_A          198 EVLHGT-Y----DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ-WKKVSESAKDLIRKMLTYVPS  271 (484)
T ss_dssp             HHHHTC-C----CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGG-GGGSCHHHHHHHHHHTCSSGG
T ss_pred             eeecCC-C----CCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcc-cccCCHHHHHHHHHHCCCChh
Confidence            999763 4    8999999999999999999999987543222111111122222221 246889999999999999999


Q ss_pred             CCCChhHHHHHHH
Q psy16840        287 SRPDFPTIRARLK  299 (413)
Q Consensus       287 ~Rps~~~i~~~l~  299 (413)
                      +|||+.+++++..
T Consensus       272 ~R~s~~e~l~h~~  284 (484)
T 3nyv_A          272 MRISARDALDHEW  284 (484)
T ss_dssp             GSCCHHHHHTSHH
T ss_pred             HCcCHHHHhhChh
Confidence            9999999997543

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.94  E-value=2.3e-28  Score=230.46  Aligned_cols=157  Identities=15%  Similarity=0.165  Sum_probs=116.5

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC----eEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR----WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~----~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      ....++.  ||+  .||+|||++|+ +||||||+|||+..+    +.+||+|||+++.......   .....+||+.|+|
T Consensus       117 ~~~~~~~--qi~--~al~~lH~~gi-vHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~a  188 (342)
T 2qr7_A          117 EASAVLF--TIT--KTVEYLHAQGV-VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG---LLMTPCYTANFVA  188 (342)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC---CBCCSSCCSSCCC
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCc-EeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC---ceeccCCCccccC
Confidence            3444555  788  99999999999 999999999998543    4599999999986543221   2334578999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCCCCCCcccccCCChHHHHHHHHHHhc
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---EDCEEPFRPNLELLRDSCEPFVLACMRDCWA  282 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (413)
                      ||++.+..+    +.++|||||||++|+|++|..||.+........   .+....... .......+++++.+||.+||.
T Consensus       189 PE~~~~~~~----~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~L~  263 (342)
T 2qr7_A          189 PEVLERQGY----DAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL-SGGYWNSVSDTAKDLVSKMLH  263 (342)
T ss_dssp             HHHHHHHHH----HHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCC-CSTTTTTSCHHHHHHHHHHTC
T ss_pred             HHHhcCCCC----CCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCccc-CccccccCCHHHHHHHHHHCC
Confidence            999987766    889999999999999999999997532111100   000011111 111224688999999999999


Q ss_pred             cCCCCCCChhHHHHHHH
Q psy16840        283 EAPESRPDFPTIRARLK  299 (413)
Q Consensus       283 ~~P~~Rps~~~i~~~l~  299 (413)
                      .||.+|||+.+++++..
T Consensus       264 ~dP~~R~t~~~il~hp~  280 (342)
T 2qr7_A          264 VDPHQRLTAALVLRHPW  280 (342)
T ss_dssp             SSTTTSCCHHHHTTSHH
T ss_pred             CChhHCcCHHHHhcCCe
Confidence            99999999999987644

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.94  E-value=1.6e-28  Score=230.25  Aligned_cols=161  Identities=22%  Similarity=0.373  Sum_probs=120.7

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.................++..|+|||++.
T Consensus       147 ~~~i~~--qi~--~aL~~LH~~~i-vH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  221 (326)
T 2w1i_A          147 LLQYTS--QIC--KGMEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT  221 (326)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTE-ECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHhCCE-eccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhc
Confidence            344444  777  99999999999 9999999999999999999999999987643322111123345678899999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCC-------CCCCC--------CCCCCCCCCCcccccCCChHHHHH
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGL-------YEPKG--------EDCEEPFRPNLELLRDSCEPFVLA  275 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-------~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~  275 (413)
                      +..+    +.++||||||+++|+|++|..||.....       .....        .......++.   .+..+++++.+
T Consensus       222 ~~~~----~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~  294 (326)
T 2w1i_A          222 ESKF----SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP---RPDGCPDEIYM  294 (326)
T ss_dssp             HCEE----EHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCC---CCTTCCHHHHH
T ss_pred             CCCC----CchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCC---CCCcccHHHHH
Confidence            8776    8999999999999999999998753210       00000        0000011111   23578899999


Q ss_pred             HHHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        276 CMRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       276 li~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      +|.+||+.||.+|||+.++++.|+.+..
T Consensus       295 li~~cl~~dP~~Rps~~el~~~L~~l~~  322 (326)
T 2w1i_A          295 IMTECWNNNVNQRPSFRDLALRVDQIRD  322 (326)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999887743

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.94  E-value=3.5e-28  Score=247.81  Aligned_cols=161  Identities=24%  Similarity=0.407  Sum_probs=120.7

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ++..+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++.......  .......+|+.|+||
T Consensus       489 ~~~~~~~i~~--qi~--~aL~~LH~~gi-vHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~--~~~~~~~~t~~y~aP  561 (656)
T 2j0j_A          489 DLASLILYAY--QLS--TALAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY--YKASKGKLPIKWMAP  561 (656)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEEEETTEEEECCCCCCCSCCC------------CCGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCc-cccccchHhEEEeCCCCEEEEecCCCeecCCCcc--eeccCCCCCcceeCH
Confidence            3444444455  777  99999999999 9999999999999999999999999986543221  112234567899999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |++.+..+    +.++|||||||++|||++ |..||.+.........+.. ..++.   .+..+++.+.++|.+||+.||
T Consensus       562 E~~~~~~~----~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~-~~~~~---~~~~~~~~l~~li~~~l~~dP  633 (656)
T 2j0j_A          562 ESINFRRF----TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-GERLP---MPPNCPPTLYSLMTKCWAYDP  633 (656)
T ss_dssp             HHHHHCCC----CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH-TCCCC---CCTTCCHHHHHHHHHHTCSSG
T ss_pred             HHhcCCCC----CchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-CCCCC---CCccccHHHHHHHHHHcCCCh
Confidence            99987766    999999999999999997 9999976542221111111 11111   235788999999999999999


Q ss_pred             CCCCChhHHHHHHHhhc
Q psy16840        286 ESRPDFPTIRARLKHMK  302 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~  302 (413)
                      .+|||+.++++.|+.+.
T Consensus       634 ~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          634 SRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             GGSCCHHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHHHHHH
Confidence            99999999999988764

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.94  E-value=2.2e-27  Score=222.79  Aligned_cols=159  Identities=18%  Similarity=0.211  Sum_probs=109.8

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEE-----cCCeEEEEeccccccccccccCCCcccccccCccc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVV-----TSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL  202 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill-----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~  202 (413)
                      ...+..++.  ||+  .||.|||++|+ +||||||+|||+     +.++.+||+|||++........   ......||+.
T Consensus       131 ~~~~~~i~~--ql~--~~l~~LH~~~i-vH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~t~~  202 (329)
T 3gbz_A          131 MRVIKSFLY--QLI--NGVNFCHSRRC-LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR---QFTHEIITLW  202 (329)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--------------CCT
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCE-ECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc---ccCCCcCCcc
Confidence            334445555  788  99999999999 999999999999     4556799999999976542211   1234467999


Q ss_pred             ccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC------------------------CCCCCC
Q psy16840        203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE------------------------DCEEPF  258 (413)
Q Consensus       203 y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~------------------------~~~~~~  258 (413)
                      |+|||++.+...   ++.++|||||||++|+|++|..||.+.........                        ......
T Consensus       203 y~aPE~~~~~~~---~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (329)
T 3gbz_A          203 YRPPEILLGSRH---YSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFR  279 (329)
T ss_dssp             TCCHHHHTTCCC---CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCC
T ss_pred             ccCHHHhcCCCC---CCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhc
Confidence            999999977542   28999999999999999999999976431110000                        000000


Q ss_pred             CCC-cccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        259 RPN-LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       259 ~~~-~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ... ...++..+++++.+||.+||+.||.+|||+.+++++
T Consensus       280 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  319 (329)
T 3gbz_A          280 GKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH  319 (329)
T ss_dssp             CCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             cccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence            000 011123378899999999999999999999999874

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.94  E-value=1.7e-28  Score=225.92  Aligned_cols=155  Identities=17%  Similarity=0.255  Sum_probs=113.2

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeE--------EEEeccccccccccccCCCcccccccCccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWV--------LQVTDFGLHELRHCAENDSIGEHQYYRSLL  202 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~--------~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~  202 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+|||++.++.        +||+|||++.....       .....||+.
T Consensus       115 ~~~i~~--qi~--~~L~~LH~~~i-vH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~-------~~~~~~~~~  182 (289)
T 4fvq_A          115 KLEVAK--QLA--AAMHFLEENTL-IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP-------KDILQERIP  182 (289)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSC-------HHHHHHTTT
T ss_pred             HHHHHH--HHH--HHHHHHhhCCe-ECCCcCcceEEEecCCcccccccceeeeccCcccccccC-------ccccCCcCc
Confidence            344444  777  99999999999 99999999999998876        99999999865422       123457889


Q ss_pred             ccCcccccC-CCCCCCCCccchhHHHHHHHHHHHhCCC-CCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHH
Q psy16840        203 WKAPELLRD-THAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDC  280 (413)
Q Consensus       203 y~aPE~~~~-~~~~~~~~~~~Dv~slG~il~el~~g~~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (413)
                      |+|||++.+ ..+    +.++||||||+++|+|++|.. ||..............   .   ...+...++++.+++.+|
T Consensus       183 y~aPE~~~~~~~~----~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~l~~li~~~  252 (289)
T 4fvq_A          183 WVPPECIENPKNL----NLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED---R---HQLPAPKAAELANLINNC  252 (289)
T ss_dssp             TSCHHHHHCGGGC----CHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT---T---CCCCCCSSCTTHHHHHHH
T ss_pred             ccCHHHhCCCCCC----CchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc---c---CCCCCCCCHHHHHHHHHH
Confidence            999999987 444    899999999999999999654 4443221110000000   0   111234567899999999


Q ss_pred             hccCCCCCCChhHHHHHHHhhcccCcc
Q psy16840        281 WAEAPESRPDFPTIRARLKHMKDGKQK  307 (413)
Q Consensus       281 l~~~P~~Rps~~~i~~~l~~~~~~~~~  307 (413)
                      |+.||.+|||+.++++.|+.+......
T Consensus       253 l~~dp~~Rps~~~ll~~l~~l~~p~~~  279 (289)
T 4fvq_A          253 MDYEPDHRPSFRAIIRDLNSLFTPDLV  279 (289)
T ss_dssp             SCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred             cCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence            999999999999999999998775543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.94  E-value=9.4e-28  Score=233.21  Aligned_cols=153  Identities=18%  Similarity=0.223  Sum_probs=105.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcC-----CeEEEEeccccccccccccCCCcccccccCcccccCcccccCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-----RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTH  213 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  213 (413)
                      ||+  .||.|||++|+ +||||||+|||++.     ...+||+|||+++................||+.|+|||++.+..
T Consensus       126 qi~--~aL~~LH~~~i-vHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  202 (432)
T 3p23_A          126 QTT--SGLAHLHSLNI-VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDC  202 (432)
T ss_dssp             HHH--HHHHHHHHTTC-CCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC-
T ss_pred             HHH--HHHHHHHHCcC-EeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhccc
Confidence            777  99999999999 99999999999953     34688999999987654332222334567999999999997532


Q ss_pred             CCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChh
Q psy16840        214 APIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP  292 (413)
Q Consensus       214 ~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~  292 (413)
                      . ..++.++|||||||++|||++ |..||.....................  .....+..+.+||.+||+.||.+|||+.
T Consensus       203 ~-~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rps~~  279 (432)
T 3p23_A          203 K-ENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLH--PEKHEDVIARELIEKMIAMDPQKRPSAK  279 (432)
T ss_dssp             ---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSC--TTCHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             c-cCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccC--ccccccHHHHHHHHHHHhCCHhhCCCHH
Confidence            1 123789999999999999999 89999653211111111111111100  1123466789999999999999999999


Q ss_pred             HHHHH
Q psy16840        293 TIRAR  297 (413)
Q Consensus       293 ~i~~~  297 (413)
                      +++++
T Consensus       280 evl~h  284 (432)
T 3p23_A          280 HVLKH  284 (432)
T ss_dssp             HHHTS
T ss_pred             HHHhC
Confidence            99854

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.94  E-value=5e-28  Score=240.04  Aligned_cols=142  Identities=24%  Similarity=0.319  Sum_probs=110.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++.......   .....+||+.|+|||++.+..+    
T Consensus       297 qi~--~aL~~LH~~gI-vHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~---~~~~~~GT~~Y~APE~l~~~~~----  366 (543)
T 3c4z_A          297 QIV--SGLEHLHQRNI-IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT---KTKGYAGTPGFMAPELLLGEEY----  366 (543)
T ss_dssp             HHH--HHHHHHHHTTE-ECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC---CBCCCCSCTTTSCHHHHTTCCB----
T ss_pred             HHH--HHHHHHHHcCC-cccCCChHHEEEeCCCCEEEeecceeeeccCCCc---ccccccCCccccChhhhcCCCC----
Confidence            777  99999999999 9999999999999999999999999986543221   1234589999999999988776    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      +.++|||||||++|||++|..||.+............... ......+..+++.+.++|.+||+.||.+||++
T Consensus       367 ~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL-EQAVTYPDKFSPASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred             ChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHh-hcccCCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence            9999999999999999999999976532111000000000 00011235788999999999999999999976

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.94  E-value=2.7e-27  Score=220.77  Aligned_cols=160  Identities=16%  Similarity=0.167  Sum_probs=111.7

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeE---EEEeccccccccccccC----CCcccccccCcc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGLHELRHCAEN----DSIGEHQYYRSL  201 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~---~kl~Dfg~a~~~~~~~~----~~~~~~~~~gt~  201 (413)
                      ..+..++.  ||+  .||+|||++|+ +||||||+|||++.++.   +||+|||++........    .........||+
T Consensus       111 ~~~~~i~~--qi~--~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~  185 (316)
T 2ac3_A          111 LEASVVVQ--DVA--SALDFLHNKGI-AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA  185 (316)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSG
T ss_pred             HHHHHHHH--HHH--HHHHHHHhCCc-eeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCc
Confidence            33444555  788  99999999999 99999999999987765   99999999876532211    111122446899


Q ss_pred             cccCcccccC-----CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC---------------CCCCCCC
Q psy16840        202 LWKAPELLRD-----THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC---------------EEPFRPN  261 (413)
Q Consensus       202 ~y~aPE~~~~-----~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~---------------~~~~~~~  261 (413)
                      .|+|||++.+     ..+    +.++|||||||++|+|++|..||.+...........               .......
T Consensus       186 ~y~aPE~~~~~~~~~~~~----~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  261 (316)
T 2ac3_A          186 EYMAPEVVEAFSEEASIY----DKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFP  261 (316)
T ss_dssp             GGCCHHHHHHTSHHHHHH----TTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCC
T ss_pred             CccChHHhhcccccccCC----CcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccC
Confidence            9999999875     334    889999999999999999999998754322111000               0000000


Q ss_pred             cccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                       ......+++.+.+|+.+||+.||.+|||+.+++++.
T Consensus       262 -~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp  297 (316)
T 2ac3_A          262 -DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP  297 (316)
T ss_dssp             -HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHST
T ss_pred             -chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcCh
Confidence             111245788999999999999999999999998753

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.94  E-value=2.7e-28  Score=233.74  Aligned_cols=102  Identities=23%  Similarity=0.330  Sum_probs=84.3

Q ss_pred             hhHhhhccccCCchHHhhHhhh--cCCCcccCCCCCCCeEEc--CCeEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLH--RSPIGCHGNLKSSNCVVT--SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH--~~~iiiHrdlkp~Nill~--~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      ..+..++.  ||+  .||.|||  +.|+ +||||||+|||++  .++.+||+|||+++.....      .....||+.|+
T Consensus       157 ~~~~~i~~--qi~--~al~~lH~~~~~i-vHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~------~~~~~~t~~y~  225 (382)
T 2vx3_A          157 NLTRKFAQ--QMC--TALLFLATPELSI-IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------IYQYIQSRFYR  225 (382)
T ss_dssp             HHHHHHHH--HHH--HHHHHHTSTTTCE-ECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC------CCSSCSCGGGC
T ss_pred             HHHHHHHH--HHH--HHHHHhccCCCCE-EcCCCCcccEEEecCCCCcEEEEeccCceecccc------cccccCCcccc
Confidence            33444455  777  9999999  4688 9999999999995  4788999999998765321      23457899999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG  245 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~  245 (413)
                      |||++.+..+    +.++|||||||++|||++|..||.+.+
T Consensus       226 aPE~~~~~~~----~~~~DiwSlG~il~elltg~~pf~~~~  262 (382)
T 2vx3_A          226 SPEVLLGMPY----DLAIDMWSLGCILVEMHTGEPLFSGAN  262 (382)
T ss_dssp             CHHHHTTCCC----CTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ChHHHcCCCC----CcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999988776    999999999999999999999998643

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.94  E-value=1.4e-27  Score=218.27  Aligned_cols=158  Identities=19%  Similarity=0.289  Sum_probs=118.2

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+||+++.++.+||+|||++......... .......|++.|+||
T Consensus       103 ~~~~~~~~~~--~i~--~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aP  176 (276)
T 2yex_A          103 PEPDAQRFFH--QLM--AGVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-RLLNKMCGTLPYVAP  176 (276)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE-CCBCCCCSCGGGCCG
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCe-eccCCChHHEEEccCCCEEEeeCCCccccCCCcch-hcccCCccccCccCh
Confidence            3334445555  777  99999999999 99999999999999999999999998765322211 112345789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC--CCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE--DCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      |++.+..+   ++.++||||||+++|+|++|..||...........  .......+    ....+++.+.+++.+||+.|
T Consensus       177 E~~~~~~~---~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~  249 (276)
T 2yex_A          177 ELLKRREF---HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPLALLHKILVEN  249 (276)
T ss_dssp             GGGTCSSB---CHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTST----TGGGSCHHHHHHHHHHSCSS
T ss_pred             HHHhcCCC---CCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccC----chhhcCHHHHHHHHHHCCCC
Confidence            99987653   16789999999999999999999976442211100  00011111    12467889999999999999


Q ss_pred             CCCCCChhHHHHH
Q psy16840        285 PESRPDFPTIRAR  297 (413)
Q Consensus       285 P~~Rps~~~i~~~  297 (413)
                      |.+|||+.++++.
T Consensus       250 p~~Rps~~~il~~  262 (276)
T 2yex_A          250 PSARITIPDIKKD  262 (276)
T ss_dssp             TTTSCCHHHHTTC
T ss_pred             chhCCCHHHHhcC
Confidence            9999999999864

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.94  E-value=2.2e-27  Score=225.04  Aligned_cols=157  Identities=19%  Similarity=0.321  Sum_probs=117.1

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++......      .....||+.|+|
T Consensus       123 ~~~~~~~~i~~--qi~--~al~~LH~~~i-vH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~------~~~~~~t~~y~a  191 (353)
T 3coi_A          123 FSEEKIQYLVY--QML--KGLKYIHSAGV-VHRDLKPGNLAVNEDCELKILDFGLARHADAE------MTGYVVTRWYRA  191 (353)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSSCCGGGEEECTTCCEEECSTTCTTC--------------CCSBCCSC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCc-ccCCCCHHHEeECCCCcEEEeecccccCCCCC------ccccccCcCcCC
Confidence            44444555666  888  99999999999 99999999999999999999999998764321      234568999999


Q ss_pred             cccccC-CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--------------------------CCCCCCC
Q psy16840        206 PELLRD-THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--------------------------EDCEEPF  258 (413)
Q Consensus       206 PE~~~~-~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--------------------------~~~~~~~  258 (413)
                      ||++.+ ..+    +.++|||||||++|+|++|..||.+.+......                          .......
T Consensus       192 PE~~~~~~~~----~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (353)
T 3coi_A          192 PEVILSWMHY----NQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP  267 (353)
T ss_dssp             HHHHSCCSCC----CTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCS
T ss_pred             HHHHhCcCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCC
Confidence            999876 334    899999999999999999999997644111000                          0000111


Q ss_pred             CCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ++........+++.+.++|.+||+.||.+|||+.+++++
T Consensus       268 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          268 RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             SCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             CccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            122222335678999999999999999999999999875

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.94  E-value=7.3e-28  Score=225.32  Aligned_cols=157  Identities=16%  Similarity=0.193  Sum_probs=116.1

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe---EEEEeccccccccccccCCCcccccccCccccc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      ...+..++.  ||+  .||.|||++|+ +||||||+|||++.++   .+||+|||++.......    ......||+.|+
T Consensus       113 ~~~~~~~~~--qi~--~~l~~lH~~~i-vH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~gt~~y~  183 (322)
T 2ycf_A          113 EATCKLYFY--QML--LAVQYLHENGI-IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYL  183 (322)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH----HHHHHHSCCTTC
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCe-eccCCCHHHEEEecCCCCCeEEEccCccceeccccc----ccccccCCcCcc
Confidence            333444555  788  99999999999 9999999999998765   49999999987653211    123456899999


Q ss_pred             Cccccc---CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHh
Q psy16840        205 APELLR---DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCW  281 (413)
Q Consensus       205 aPE~~~---~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (413)
                      |||++.   ...+    +.++|||||||++|+|++|..||.....................+.....+++.+.+++.+||
T Consensus       184 aPE~~~~~~~~~~----~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  259 (322)
T 2ycf_A          184 APEVLVSVGTAGY----NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL  259 (322)
T ss_dssp             CHHHHHHTTTTTC----TTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHS
T ss_pred             CchhhccCCCCCC----CchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHc
Confidence            999974   2333    889999999999999999999997644221111111111111222334578899999999999


Q ss_pred             ccCCCCCCChhHHHHH
Q psy16840        282 AEAPESRPDFPTIRAR  297 (413)
Q Consensus       282 ~~~P~~Rps~~~i~~~  297 (413)
                      ..||.+|||+.++++.
T Consensus       260 ~~dP~~Rps~~~~l~h  275 (322)
T 2ycf_A          260 VVDPKARFTTEEALRH  275 (322)
T ss_dssp             CSSTTTSCCHHHHHTS
T ss_pred             ccCHhhCCCHHHHhhC
Confidence            9999999999999764

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.94  E-value=1.1e-27  Score=219.96  Aligned_cols=148  Identities=14%  Similarity=0.184  Sum_probs=116.4

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+||+++.++.+||+|||++......     ......|++.|+|||++.
T Consensus       116 ~~~~~~--qi~--~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~  185 (284)
T 2vgo_A          116 SATFME--ELA--DALHYCHERKV-IHRDIKPENLLMGYKGELKIADFGWSVHAPSL-----RRRTMCGTLDYLPPEMIE  185 (284)
T ss_dssp             HHHHHH--HHH--HHHHHHHTTTE-ECCCCSGGGEEECTTCCEEECCCTTCEECSSS-----CBCCCCSCGGGCCHHHHT
T ss_pred             HHHHHH--HHH--HHHHHHHHCCc-eecCCCHHHEEEcCCCCEEEecccccccCccc-----ccccccCCCCcCCHHHhc
Confidence            344444  777  99999999999 99999999999999999999999998654321     123457899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +..+    +.++||||||+++|+|++|..||................  .   ..+..+++.+.+++.+||+.||.+|||
T Consensus       186 ~~~~----~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~li~~~l~~~p~~Rps  256 (284)
T 2vgo_A          186 GKTH----DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD--L---KFPPFLSDGSKDLISKLLRYHPPQRLP  256 (284)
T ss_dssp             TCCB----CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC--C---CCCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             cCCC----CcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccc--c---CCCCcCCHHHHHHHHHHhhcCHhhCCC
Confidence            8776    899999999999999999999997643211111111111  1   123567889999999999999999999


Q ss_pred             hhHHHHH
Q psy16840        291 FPTIRAR  297 (413)
Q Consensus       291 ~~~i~~~  297 (413)
                      +.+++++
T Consensus       257 ~~~ll~h  263 (284)
T 2vgo_A          257 LKGVMEH  263 (284)
T ss_dssp             HHHHHTC
T ss_pred             HHHHhhC
Confidence            9999874

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.94  E-value=8.4e-28  Score=219.90  Aligned_cols=154  Identities=17%  Similarity=0.180  Sum_probs=116.3

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEE---cCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVV---TSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      ..+..++.  |++  .||.|||++|+ +||||||+|||+   +.++.+||+|||++.......    ......||+.|+|
T Consensus       106 ~~~~~i~~--~i~--~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~~~~t~~y~a  176 (277)
T 3f3z_A          106 SDAARIMK--DVL--SAVAYCHKLNV-AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK----MMRTKVGTPYYVS  176 (277)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS----CBCCCCSCTTTCC
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCc-cCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc----chhccCCCCCccC
Confidence            33444555  777  99999999999 999999999999   778999999999987654222    2234568999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      ||++.+. +    +.++||||||+++|+|++|..||.+.................. ......+++.+.+++.+||+.||
T Consensus       177 PE~~~~~-~----~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp  250 (277)
T 3f3z_A          177 PQVLEGL-Y----GPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFP-EKDWLNVSPQAESLIRRLLTKSP  250 (277)
T ss_dssp             HHHHTTC-B----CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-HHHHTTSCHHHHHHHHHHTCSST
T ss_pred             hHHhccc-C----CchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC-chhhhcCCHHHHHHHHHHccCCh
Confidence            9998765 4    8999999999999999999999976432211111111111111 11123678999999999999999


Q ss_pred             CCCCChhHHHHH
Q psy16840        286 ESRPDFPTIRAR  297 (413)
Q Consensus       286 ~~Rps~~~i~~~  297 (413)
                      .+|||+.++++.
T Consensus       251 ~~R~s~~~~l~h  262 (277)
T 3f3z_A          251 KQRITSLQALEH  262 (277)
T ss_dssp             TTSCCHHHHTTS
T ss_pred             hhCcCHHHHhcC
Confidence            999999999864

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.94  E-value=1.7e-28  Score=224.76  Aligned_cols=158  Identities=16%  Similarity=0.192  Sum_probs=117.9

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCC-----CcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCccc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSP-----IGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL  202 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~-----iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~  202 (413)
                      ...+..++.  ||+  .||.|||+++     + +||||||+|||++.++.+||+|||++.......   .......|++.
T Consensus       110 ~~~~~~i~~--~i~--~~l~~lH~~~~~~~~i-vH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~  181 (279)
T 2w5a_A          110 EEFVLRVMT--QLT--LALKECHRRSDGGHTV-LHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---SFAKTFVGTPY  181 (279)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHHC-------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C---HHHHHHHSCCT
T ss_pred             HHHHHHHHH--HHH--HHHHHHhcccCCCCee-EEeccchhhEEEcCCCCEEEecCchheeecccc---ccccccCCCcc
Confidence            333444444  777  9999999988     8 999999999999999999999999987653221   11223468999


Q ss_pred             ccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhc
Q psy16840        203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWA  282 (413)
Q Consensus       203 y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (413)
                      |+|||++.+..+    +.++||||||+++|+|++|..||............... ..+   .++..+++++.+++.+||+
T Consensus       182 y~aPE~~~~~~~----~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~-~~~---~~~~~~~~~l~~li~~~l~  253 (279)
T 2w5a_A          182 YMSPEQMNRMSY----NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-KFR---RIPYRYSDELNEIITRMLN  253 (279)
T ss_dssp             TCCHHHHHCC-C----CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-CCC---CCCTTSCHHHHHHHHHHTC
T ss_pred             ccChHHhccCCC----CchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhc-ccc---cCCcccCHHHHHHHHHHcC
Confidence            999999988766    89999999999999999999999764321111111011 111   2235688999999999999


Q ss_pred             cCCCCCCChhHHHHHHHhh
Q psy16840        283 EAPESRPDFPTIRARLKHM  301 (413)
Q Consensus       283 ~~P~~Rps~~~i~~~l~~~  301 (413)
                      .||.+|||+.++++.++..
T Consensus       254 ~~p~~Rps~~~ll~~~~~~  272 (279)
T 2w5a_A          254 LKDYHRPSVEEILENPLIL  272 (279)
T ss_dssp             SSGGGSCCHHHHHTSTTCC
T ss_pred             CCcccCCCHHHHHhChhhh
Confidence            9999999999998876543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.94  E-value=1e-27  Score=227.11  Aligned_cols=160  Identities=23%  Similarity=0.299  Sum_probs=116.4

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC-------cccccccCccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-------IGEHQYYRSLL  202 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-------~~~~~~~gt~~  202 (413)
                      .+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||++..........       .......||+.
T Consensus       113 ~~~~~~~--qi~--~~L~~LH~~~i-vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~  187 (353)
T 2b9h_A          113 HIQYFIY--QTL--RAVKVLHGSNV-IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW  187 (353)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGG
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCe-ecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhcccccc
Confidence            3444555  777  99999999999 999999999999999999999999998654322111       11223578999


Q ss_pred             ccCcccccC-CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC---------------CCCC------------C
Q psy16840        203 WKAPELLRD-THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEP---------------KGED------------C  254 (413)
Q Consensus       203 y~aPE~~~~-~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~---------------~~~~------------~  254 (413)
                      |+|||++.+ ..+    +.++|||||||++|+|++|..||.+.+....               ....            .
T Consensus       188 y~aPE~~~~~~~~----~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
T 2b9h_A          188 YRAPEVMLTSAKY----SRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSL  263 (353)
T ss_dssp             GCCHHHHHSCCCC----CHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTS
T ss_pred             ccCCeeeccCCCc----cchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcc
Confidence            999998765 444    8999999999999999999999976531100               0000            0


Q ss_pred             CCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        255 EEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      ............+.+++++.+++.+||+.||.+|||+.+++++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  307 (353)
T 2b9h_A          264 PMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP  307 (353)
T ss_dssp             CCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             cCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence            00011112223357889999999999999999999999998753

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.94  E-value=3.7e-28  Score=241.70  Aligned_cols=156  Identities=17%  Similarity=0.210  Sum_probs=117.9

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ...+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++......    .....+||+.|+|||
T Consensus       285 e~~~~~i~~--qIl--~aL~yLH~~gI-vHrDLKPeNILld~~g~vKL~DFGla~~~~~~~----~~~~~~GT~~Y~APE  355 (576)
T 2acx_A          285 EARAVFYAA--EIC--CGLEDLHRERI-VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----TIKGRVGTVGYMAPE  355 (576)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECTTSCEEECCCTTCEECCTTC----CEECCCSCGGGCCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCE-eccCCchheEEEeCCCCeEEEecccceecccCc----cccccCCCccccCHH
Confidence            333334444  777  99999999999 999999999999999999999999997653221    123457999999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      ++.+..+    +.++|||||||++|||++|..||.+............ ........++..+++++.+||.+||+.||.+
T Consensus       356 vl~~~~~----~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~-~i~~~~~~~p~~~s~~~~dLI~~lL~~dP~~  430 (576)
T 2acx_A          356 VVKNERY----TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER-LVKEVPEEYSERFSPQARSLCSQLLCKDPAE  430 (576)
T ss_dssp             HHTTCEE----SSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHH-HHHHCCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHcCCCC----CccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHH-HhhcccccCCccCCHHHHHHHHHhccCCHHH
Confidence            9988776    8999999999999999999999976432111000000 0000001123568899999999999999999


Q ss_pred             CC-----ChhHHHHH
Q psy16840        288 RP-----DFPTIRAR  297 (413)
Q Consensus       288 Rp-----s~~~i~~~  297 (413)
                      ||     ++.+++++
T Consensus       431 R~g~~~~sa~eil~H  445 (576)
T 2acx_A          431 RLGCRGGSAREVKEH  445 (576)
T ss_dssp             STTCSSSHHHHHHTS
T ss_pred             cCCCCCCCHHHHHhC
Confidence            99     67888754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.94  E-value=4.4e-28  Score=226.24  Aligned_cols=157  Identities=18%  Similarity=0.240  Sum_probs=113.9

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEc-CCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVT-SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      ..++.  ||+  .||+|||++|+ +||||||+|||++ .++.+||+|||+++................+|..|+|||.+.
T Consensus       123 ~~~~~--qi~--~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (320)
T 2i6l_A          123 RLFMY--QLL--RGLKYIHSANV-LHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLL  197 (320)
T ss_dssp             HHHHH--HHH--HHHHHHHHTTC-BCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHH
T ss_pred             HHHHH--HHH--HHHHHHHhCCE-ecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhc
Confidence            34444  777  99999999999 9999999999997 567999999999987543222222233456789999999887


Q ss_pred             C-CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-------------------------CCCCCCCccc
Q psy16840        211 D-THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC-------------------------EEPFRPNLEL  264 (413)
Q Consensus       211 ~-~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~-------------------------~~~~~~~~~~  264 (413)
                      + ..+    +.++||||||+++|+|++|..||.+...........                         ..........
T Consensus       198 ~~~~~----~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (320)
T 2i6l_A          198 SPNNY----TKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQ  273 (320)
T ss_dssp             CTTCC----CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHH
T ss_pred             CcccC----CchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhH
Confidence            6 344    899999999999999999999997654211100000                         0001111222


Q ss_pred             ccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        265 LRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ....+++++.++|.+||+.||.+|||+.++++.
T Consensus       274 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          274 LLPGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             HSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             hcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence            335688999999999999999999999999875

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.94  E-value=2.5e-27  Score=225.40  Aligned_cols=158  Identities=18%  Similarity=0.313  Sum_probs=112.4

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.......    ......||+.|+||
T Consensus       132 ~~~~~~~~~~--qi~--~~l~~lH~~~i-vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~t~~y~aP  202 (362)
T 3pg1_A          132 SPQHIQYFMY--HIL--LGLHVLHEAGV-VHRDLHPGNILLADNNDITICDFNLAREDTADA----NKTHYVTHRWYRAP  202 (362)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECCTTC-------------------CGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCcC-EecCCChHHEEEcCCCCEEEEecCccccccccc----ccceecccceecCc
Confidence            3444445555  788  99999999999 999999999999999999999999987543221    12345789999999


Q ss_pred             ccccC-CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---------------------------CCCCCCC
Q psy16840        207 ELLRD-THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---------------------------EDCEEPF  258 (413)
Q Consensus       207 E~~~~-~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---------------------------~~~~~~~  258 (413)
                      |++.+ ..+    +.++|||||||++|+|++|..||.+........                           .......
T Consensus       203 E~~~~~~~~----~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (362)
T 3pg1_A          203 ELVMQFKGF----TKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP  278 (362)
T ss_dssp             HHHTTCTTC----CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCC
T ss_pred             HHhcCCCCC----CcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCC
Confidence            99877 444    899999999999999999999997643111000                           0111111


Q ss_pred             CCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ..........+++.+.+|+.+||+.||.+|||+.+++++
T Consensus       279 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          279 ARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             CCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            112223345678899999999999999999999999875

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.94  E-value=3.3e-27  Score=234.34  Aligned_cols=158  Identities=17%  Similarity=0.216  Sum_probs=120.1

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe---EEEEeccccccccccccCCCcccccccCcccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+|||++.++   .+||+|||++.......    ......||+.|
T Consensus       144 ~~~~~~~i~~--qi~--~~l~~lH~~~i-vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y  214 (504)
T 3q5i_A          144 DECDAANIMK--QIL--SGICYLHKHNI-VHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY----KLRDRLGTAYY  214 (504)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS----CBCCCCSCTTT
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCe-EeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC----ccccccCCcCC
Confidence            3334445555  888  99999999999 9999999999998775   69999999998654321    23345789999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      +|||++.+. +    +.++||||+||++|+|++|..||.+.+.......+.........+ ....+++++.+||.+||..
T Consensus       215 ~aPE~~~~~-~----~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~~L~~  288 (504)
T 3q5i_A          215 IAPEVLKKK-Y----NEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFN-DWKNISDEAKELIKLMLTY  288 (504)
T ss_dssp             CCHHHHTTC-B----CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHH-HHTTSCHHHHHHHHHHTCS
T ss_pred             CCHHHhccC-C----CchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcc-ccCCCCHHHHHHHHHHcCC
Confidence            999998743 4    899999999999999999999998754322211111111111111 1256889999999999999


Q ss_pred             CCCCCCChhHHHHHHH
Q psy16840        284 APESRPDFPTIRARLK  299 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l~  299 (413)
                      ||.+|||+.+++++.+
T Consensus       289 dp~~R~t~~e~l~h~~  304 (504)
T 3q5i_A          289 DYNKRCTAEEALNSRW  304 (504)
T ss_dssp             STTTSCCHHHHHTSHH
T ss_pred             ChhHCCCHHHHhcCHh
Confidence            9999999999997644

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.94  E-value=3.8e-27  Score=223.84  Aligned_cols=156  Identities=19%  Similarity=0.197  Sum_probs=115.4

Q ss_pred             hHhhhccccCCchHHhhHhhh--cCCCcccCCCCCCCeEEcC-CeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLH--RSPIGCHGNLKSSNCVVTS-RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH--~~~iiiHrdlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..++.  |++  .||.|||  ++|+ +||||||+|||++. ++.+||+|||+++......    ......||+.|+||
T Consensus       130 ~~~~~~~--qi~--~al~~lH~~~~~i-vH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aP  200 (360)
T 3e3p_A          130 LIKVFLF--QLI--RSIGCLHLPSVNV-CHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE----PNVAYICSRYYRAP  200 (360)
T ss_dssp             HHHHHHH--HHH--HHHHHHTSTTTCC-BCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTS----CCCSTTSCGGGCCH
T ss_pred             HHHHHHH--HHH--HHHHHHhCCCCCe-ecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCC----CcccccCCcceeCH
Confidence            3344455  777  9999999  9999 99999999999997 8999999999998654322    12345689999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-----------------------CCCCCCC--
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC-----------------------EEPFRPN--  261 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~-----------------------~~~~~~~--  261 (413)
                      |++.+...   ++.++|||||||++|+|++|..||.+.+.........                       .......  
T Consensus       201 E~~~~~~~---~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (360)
T 3e3p_A          201 ELIFGNQH---YTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWS  277 (360)
T ss_dssp             HHHTTCSS---CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHH
T ss_pred             HHHcCCCC---CCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcc
Confidence            99866542   2899999999999999999999997643211000000                       0000000  


Q ss_pred             --cccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        262 --LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       262 --~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                        .+......++++.+|+.+||+.||.+|||+.+++++
T Consensus       278 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          278 NVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             cccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence              011123367899999999999999999999999875

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.94  E-value=1.5e-27  Score=221.28  Aligned_cols=153  Identities=16%  Similarity=0.181  Sum_probs=116.4

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEE---cCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVV---TSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+||++   +.++.+||+|||++......     ......||+.|+|||
T Consensus       108 ~~~~~~--qi~--~~l~~lH~~~i-~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~~~y~aPE  177 (304)
T 2jam_A          108 ASLVIQ--QVL--SAVKYLHENGI-VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-----IMSTACGTPGYVAPE  177 (304)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-----TTHHHHSCCCBCCTT
T ss_pred             HHHHHH--HHH--HHHHHHHHCCc-cccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-----ccccccCCCCccChH
Confidence            334444  777  99999999999 999999999999   77889999999998654221     123346899999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPES  287 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  287 (413)
                      ++.+..+    +.++||||||+++|+|++|..||.+................. .......+++.+.+++.+||..||.+
T Consensus       178 ~~~~~~~----~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~  252 (304)
T 2jam_A          178 VLAQKPY----SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEF-ESPFWDDISESAKDFICHLLEKDPNE  252 (304)
T ss_dssp             TBSSCSC----CHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCC-CTTTTTTSCHHHHHHHHHHHCSSTTT
T ss_pred             HhccCCC----CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC-CccccccCCHHHHHHHHHHcCCChhH
Confidence            9988766    899999999999999999999997643211111110111111 11122567899999999999999999


Q ss_pred             CCChhHHHHHH
Q psy16840        288 RPDFPTIRARL  298 (413)
Q Consensus       288 Rps~~~i~~~l  298 (413)
                      |||+.++++..
T Consensus       253 Rps~~~~l~h~  263 (304)
T 2jam_A          253 RYTCEKALSHP  263 (304)
T ss_dssp             SCCHHHHHTSH
T ss_pred             CcCHHHHhcCc
Confidence            99999998754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.94  E-value=2.8e-28  Score=228.79  Aligned_cols=151  Identities=21%  Similarity=0.265  Sum_probs=111.6

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC---------cccccccCccc
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS---------IGEHQYYRSLL  202 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~---------~~~~~~~gt~~  202 (413)
                      ..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++.........         .......||+.
T Consensus       167 ~~i~~--qi~--~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  241 (332)
T 3qd2_B          167 LHIFI--QIA--EAVEFLHSKGL-MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL  241 (332)
T ss_dssp             HHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred             HHHHH--HHH--HHHHHHHhCCe-eecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence            34444  777  99999999999 999999999999999999999999998764432111         12234578999


Q ss_pred             ccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhc
Q psy16840        203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWA  282 (413)
Q Consensus       203 y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (413)
                      |+|||++.+..+    +.++|||||||++|+|++|..|+.....  ..... ...   ..+......++.+.+++.+||+
T Consensus       242 y~aPE~~~~~~~----~~~~Di~slG~il~el~~~~~~~~~~~~--~~~~~-~~~---~~~~~~~~~~~~~~~li~~~l~  311 (332)
T 3qd2_B          242 YMSPEQIHGNNY----SHKVDIFSLGLILFELLYSFSTQMERVR--IITDV-RNL---KFPLLFTQKYPQEHMMVQDMLS  311 (332)
T ss_dssp             GSCHHHHHCCCC----CTHHHHHHHHHHHHHHHSCCCCHHHHHH--HHHHH-HTT---CCCHHHHHHCHHHHHHHHHHHC
T ss_pred             ccChHHhcCCCC----cchhhHHHHHHHHHHHHHcCCChhHHHH--HHHHh-hcc---CCCcccccCChhHHHHHHHHcc
Confidence            999999988776    9999999999999999998777532110  00000 000   1111223456788999999999


Q ss_pred             cCCCCCCChhHHHHH
Q psy16840        283 EAPESRPDFPTIRAR  297 (413)
Q Consensus       283 ~~P~~Rps~~~i~~~  297 (413)
                      .||.+|||+.+++++
T Consensus       312 ~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          312 PSPTERPEATDIIEN  326 (332)
T ss_dssp             SSGGGSCCHHHHHHS
T ss_pred             CCCCcCCCHHHHhhc
Confidence            999999999999864

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.94  E-value=1.3e-27  Score=223.45  Aligned_cols=147  Identities=18%  Similarity=0.287  Sum_probs=115.5

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEc-CCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVT-SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||++ .++.+||+|||++......     ......||+.|+|
T Consensus       147 ~~~~~~~i~~--qi~--~~L~~LH~~~i-vH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~-----~~~~~~gt~~y~a  216 (320)
T 3a99_A          147 QEELARSFFW--QVL--EAVRHCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSP  216 (320)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEEETTTTEEEECCCTTCEECCSS-----CBCCCCSCGGGSC
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCc-EeCCCCHHHEEEeCCCCCEEEeeCccccccccc-----cccCCCCCccCCC
Confidence            3334445555  788  99999999999 9999999999999 7789999999998765422     1234568999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      ||++.+....   +.++||||||+++|||++|..||........      .     ....+..+++++.++|.+||+.||
T Consensus       217 PE~~~~~~~~---~~~~Di~slG~il~el~~g~~pf~~~~~~~~------~-----~~~~~~~~~~~~~~li~~~l~~dp  282 (320)
T 3a99_A          217 PEWIRYHRYH---GRSAAVWSLGILLYDMVCGDIPFEHDEEIIR------G-----QVFFRQRVSSECQHLIRWCLALRP  282 (320)
T ss_dssp             HHHHHHSCBC---HHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH------C-----CCCCSSCCCHHHHHHHHHHTCSSG
T ss_pred             hHHhccCCCC---CccchHHhHHHHHHHHHHCCCCCCChhhhhc------c-----cccccccCCHHHHHHHHHHccCCh
Confidence            9998766541   6789999999999999999999965321000      0     001235678999999999999999


Q ss_pred             CCCCChhHHHHH
Q psy16840        286 ESRPDFPTIRAR  297 (413)
Q Consensus       286 ~~Rps~~~i~~~  297 (413)
                      .+|||+.++++.
T Consensus       283 ~~Rps~~~ll~h  294 (320)
T 3a99_A          283 SDRPTFEEIQNH  294 (320)
T ss_dssp             GGSCCHHHHHTS
T ss_pred             hhCcCHHHHhcC
Confidence            999999999875

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.94  E-value=2e-27  Score=221.41  Aligned_cols=159  Identities=14%  Similarity=0.233  Sum_probs=119.5

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+||+++.++.+||+|||++........   ......|++.|+||
T Consensus       123 ~~~~~~~i~~--~i~--~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aP  194 (314)
T 3com_A          123 TEDEIATILQ--STL--KGLEYLHFMRK-IHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAP  194 (314)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS---CBCCCCSCGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCC-cCCCcCHHHEEECCCCCEEEeecccchhhhhhcc---ccCccCCCCCccCh
Confidence            3334444555  777  99999999999 9999999999999999999999999876543211   22345789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+..+    +.++||||||+++|+|++|..||.............. ...+.. ..+..+++.+.+++.+||+.||.
T Consensus       195 E~~~~~~~----~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~l~~li~~~l~~dp~  268 (314)
T 3com_A          195 EVIQEIGY----NCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT-NPPPTF-RKPELWSDNFTDFVKQCLVKSPE  268 (314)
T ss_dssp             HHHSSSCB----CTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCC-SSGGGSCHHHHHHHHHHTCSCTT
T ss_pred             hhcCCCCC----CccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc-CCCccc-CCcccCCHHHHHHHHHHccCChh
Confidence            99988776    8999999999999999999999976431111000000 000111 11345788999999999999999


Q ss_pred             CCCChhHHHHHHH
Q psy16840        287 SRPDFPTIRARLK  299 (413)
Q Consensus       287 ~Rps~~~i~~~l~  299 (413)
                      +|||+.++++...
T Consensus       269 ~Rpt~~~ll~~~~  281 (314)
T 3com_A          269 QRATATQLLQHPF  281 (314)
T ss_dssp             TSCCHHHHTTSHH
T ss_pred             hCcCHHHHHhCHH
Confidence            9999999987543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.94  E-value=1.7e-27  Score=235.83  Aligned_cols=153  Identities=20%  Similarity=0.292  Sum_probs=116.5

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC---CeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS---RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..++.  ||+  .||.|||++|+ +||||||+|||++.   ++.+||+|||++.......    ......||+.|+||
T Consensus       137 ~~~~i~~--qi~--~~l~~lH~~~i-vH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~----~~~~~~gt~~y~aP  207 (494)
T 3lij_A          137 DAAVIIK--QVL--SGVTYLHKHNI-VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK----KMKERLGTAYYIAP  207 (494)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB----CBCCCCSCTTTCCH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCc-eeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc----cccccCCCcCeeCH
Confidence            3444555  888  99999999999 99999999999976   4569999999987754322    23345799999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+ .+    +.++||||+||++|+|++|..||.+.........+.........+ ....+++.+.++|.+||+.||.
T Consensus       208 E~l~~-~~----~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~~L~~dp~  281 (494)
T 3lij_A          208 EVLRK-KY----DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSP-EWKNVSEGAKDLIKQMLQFDSQ  281 (494)
T ss_dssp             HHHTT-CB----CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSG-GGTTSCHHHHHHHHHHTCSSTT
T ss_pred             HHHcc-cC----CCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCch-hcccCCHHHHHHHHHHCCCChh
Confidence            99864 34    899999999999999999999998754222111111111111111 1246889999999999999999


Q ss_pred             CCCChhHHHHH
Q psy16840        287 SRPDFPTIRAR  297 (413)
Q Consensus       287 ~Rps~~~i~~~  297 (413)
                      +|||+.+++++
T Consensus       282 ~R~s~~e~l~h  292 (494)
T 3lij_A          282 RRISAQQALEH  292 (494)
T ss_dssp             TSCCHHHHHTC
T ss_pred             hCccHHHHhcC
Confidence            99999999864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.94  E-value=1.6e-27  Score=220.04  Aligned_cols=153  Identities=18%  Similarity=0.280  Sum_probs=118.6

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  |++  .||+|||++|+ +||||||+|||++.++.+||+|||++.......   .......||+.|+|||+
T Consensus       115 ~~~~~i~~--qi~--~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~  186 (294)
T 2rku_A          115 PEARYYLR--QIV--LGCQYLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKKVLCGTPNYIAPEV  186 (294)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEECCSTT---CCBCCCCSCCSSCCHHH
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCc-cccCCChHhEEEcCCCCEEEEeccCceecccCc---cccccccCCCCcCCcch
Confidence            33444555  777  99999999999 999999999999999999999999987653221   11234568999999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      +.+..+    +.++||||||+++|+|++|..||................     ...+..+++.+.+++.+||+.||.+|
T Consensus       187 ~~~~~~----~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~R  257 (294)
T 2rku_A          187 LSKKGH----SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE-----YSIPKHINPVAASLIQKMLQTDPTAR  257 (294)
T ss_dssp             HTTSCB----CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC-----CCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             hccCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhcc-----CCCccccCHHHHHHHHHHcccChhhC
Confidence            988766    899999999999999999999997643211111110111     11235678899999999999999999


Q ss_pred             CChhHHHHHH
Q psy16840        289 PDFPTIRARL  298 (413)
Q Consensus       289 ps~~~i~~~l  298 (413)
                      ||+.++++..
T Consensus       258 ps~~~ll~~~  267 (294)
T 2rku_A          258 PTINELLNDE  267 (294)
T ss_dssp             CCGGGGGGSH
T ss_pred             cCHHHHhhCh
Confidence            9999998754

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.93  E-value=4.9e-27  Score=225.90  Aligned_cols=156  Identities=15%  Similarity=0.168  Sum_probs=116.1

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcC-CCcccCCCCCCCeEEcCCe----------------------------------
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRS-PIGCHGNLKSSNCVVTSRW----------------------------------  171 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~-~iiiHrdlkp~Nill~~~~----------------------------------  171 (413)
                      ....+..++.  ||+  .||+|||++ |+ +||||||+|||++.++                                  
T Consensus       144 ~~~~~~~i~~--qi~--~aL~~lH~~~gi-vHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (397)
T 1wak_A          144 PLPCVKKIIQ--QVL--QGLDYLHTKCRI-IHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAG  218 (397)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTCE-ECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CC
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHhCCE-ecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccc
Confidence            3444455555  888  999999998 99 9999999999999775                                  


Q ss_pred             ---------------EEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHh
Q psy16840        172 ---------------VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG  236 (413)
Q Consensus       172 ---------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~  236 (413)
                                     .+||+|||++......      .....||+.|+|||++.+..+    +.++|||||||++|||++
T Consensus       219 ~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~----~~~~DiwslG~il~ellt  288 (397)
T 1wak_A          219 NFLVNPLEPKNAEKLKVKIADLGNACWVHKH------FTEDIQTRQYRSLEVLIGSGY----NTPADIWSTACMAFELAT  288 (397)
T ss_dssp             TTSCCTTSGGGGGGCCEEECCGGGCEETTBC------SCSCCSCGGGCCHHHHHTSCC----CTHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccceEecccccccccccc------CccCCCCCcccCChhhcCCCC----CcHHHHHHHHHHHHHHhh
Confidence                           7999999998765322      234478999999999998876    899999999999999999


Q ss_pred             CCCCCCCCCCCCCCCC----------------------------CCC-------CCCCCC-c-------ccccCCChHHH
Q psy16840        237 RRGPFGGCGLYEPKGE----------------------------DCE-------EPFRPN-L-------ELLRDSCEPFV  273 (413)
Q Consensus       237 g~~pf~~~~~~~~~~~----------------------------~~~-------~~~~~~-~-------~~~~~~~~~~l  273 (413)
                      |..||.+.+.......                            ...       ....+. .       ...+...++.+
T Consensus       289 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (397)
T 1wak_A          289 GDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGF  368 (397)
T ss_dssp             SSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHH
T ss_pred             CCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHH
Confidence            9999976542221100                            000       000000 0       00123346789


Q ss_pred             HHHHHHHhccCCCCCCChhHHHHH
Q psy16840        274 LACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       274 ~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .+||.+||+.||.+|||+.+++++
T Consensus       369 ~~li~~~L~~dP~~Rpt~~e~l~h  392 (397)
T 1wak_A          369 TDFLLPMLELIPEKRATAAECLRH  392 (397)
T ss_dssp             HHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHhccChhhcCCHHHHhhC
Confidence            999999999999999999999864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.93  E-value=1.2e-27  Score=225.08  Aligned_cols=152  Identities=18%  Similarity=0.288  Sum_probs=118.2

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++.......   .......||+.|+|||+
T Consensus       141 ~~~~~i~~--qi~--~aL~~LH~~~i-vH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~  212 (335)
T 2owb_A          141 PEARYYLR--QIV--LGCQYLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKKVLCGTPNYIAPEV  212 (335)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTE-ECSCCCGGGEEECTTCCEEECCCTTCEECCSTT---CCBCCCCSCCSSCCHHH
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCC-EecCCCchhEEEcCCCCEEEeeccCceecccCc---ccccccCCCccccCHHH
Confidence            33444555  777  99999999999 999999999999999999999999987653221   12234578999999999


Q ss_pred             ccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       209 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      +.+..+    +.++||||||+++|+|++|..||................     ..++..+++.+.++|.+||+.||.+|
T Consensus       213 ~~~~~~----~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~dp~~R  283 (335)
T 2owb_A          213 LSKKGH----SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE-----YSIPKHINPVAASLIQKMLQTDPTAR  283 (335)
T ss_dssp             HHTSCB----CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC-----CCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             hccCCC----CchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCC-----CCCCccCCHHHHHHHHHHccCChhHC
Confidence            988776    899999999999999999999997643211111000000     01235678899999999999999999


Q ss_pred             CChhHHHHH
Q psy16840        289 PDFPTIRAR  297 (413)
Q Consensus       289 ps~~~i~~~  297 (413)
                      ||+.++++.
T Consensus       284 ps~~ell~~  292 (335)
T 2owb_A          284 PTINELLND  292 (335)
T ss_dssp             CCGGGGGGS
T ss_pred             cCHHHHhcC
Confidence            999999875

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.93  E-value=1.1e-27  Score=221.79  Aligned_cols=157  Identities=20%  Similarity=0.283  Sum_probs=113.6

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++........   ......||+.|+||
T Consensus       115 ~~~~~~~~~~--~i~--~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aP  186 (302)
T 2j7t_A          115 TEPQIQVVCR--QML--EALNFLHSKRI-IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ---KRDSFIGTPYWMAP  186 (302)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH---C-----CCGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHhcCCc-ccCCCCHHHEEECCCCCEEEEECCCCcccccccc---ccccccCChhhcCC
Confidence            3334444555  777  99999999999 9999999999999999999999999754322111   12334689999999


Q ss_pred             cccc-----CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHh
Q psy16840        207 ELLR-----DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCW  281 (413)
Q Consensus       207 E~~~-----~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (413)
                      |++.     +..+    +.++||||||+++|+|++|..||................ .+. ...+..+++.+.+++.+||
T Consensus       187 E~~~~~~~~~~~~----~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~l~~li~~~l  260 (302)
T 2j7t_A          187 EVVMCETMKDTPY----DYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD-PPT-LLTPSKWSVEFRDFLKIAL  260 (302)
T ss_dssp             HHHHHHHTTSTTT----TTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-CCC-CSSGGGSCHHHHHHHHHHS
T ss_pred             eeeccccCCCCCC----chhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccC-Ccc-cCCccccCHHHHHHHHHHc
Confidence            9984     3334    889999999999999999999997643211110000000 011 1123567889999999999


Q ss_pred             ccCCCCCCChhHHHHH
Q psy16840        282 AEAPESRPDFPTIRAR  297 (413)
Q Consensus       282 ~~~P~~Rps~~~i~~~  297 (413)
                      +.||.+|||+.+++++
T Consensus       261 ~~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          261 DKNPETRPSAAQLLEH  276 (302)
T ss_dssp             CSCTTTSCCHHHHTTS
T ss_pred             ccChhhCCCHHHHhcC
Confidence            9999999999999865

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.93  E-value=1.7e-27  Score=218.55  Aligned_cols=156  Identities=17%  Similarity=0.226  Sum_probs=116.1

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe----EEEEeccccccccccccCCCcccccccCcccc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW----VLQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~----~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      ...+..++.  ||+  .||.|||++|+ +||||||+||+++.++    .+||+|||++.......    ......|++.|
T Consensus       107 ~~~~~~~~~--~i~--~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y  177 (283)
T 3bhy_A          107 EDEATQFLK--QIL--DGVHYLHSKRI-AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN----EFKNIFGTPEF  177 (283)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC------------CCCGGG
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCc-cCCCCChHHEEEecCCCCCCceEEEecccceeccCCC----cccccCCCcCc
Confidence            333444555  777  99999999999 9999999999998876    89999999987653221    12344689999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      +|||++.+..+    +.++||||||+++|+|++|..||.+................ ........+++.+.+++.+||..
T Consensus       178 ~aPE~~~~~~~----~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~  252 (283)
T 3bhy_A          178 VAPEIVNYEPL----GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD-FDEEYFSNTSELAKDFIRRLLVK  252 (283)
T ss_dssp             CCHHHHTTCCC----CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC-CCHHHHTTCCHHHHHHHHTTSCS
T ss_pred             cCcceecCCCC----CcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccC-CcchhcccCCHHHHHHHHHHccC
Confidence            99999987766    89999999999999999999999764422111111111111 11223356789999999999999


Q ss_pred             CCCCCCChhHHHHH
Q psy16840        284 APESRPDFPTIRAR  297 (413)
Q Consensus       284 ~P~~Rps~~~i~~~  297 (413)
                      ||.+|||+.++++.
T Consensus       253 dp~~Rps~~~~l~h  266 (283)
T 3bhy_A          253 DPKRRMTIAQSLEH  266 (283)
T ss_dssp             SGGGSCCHHHHHHC
T ss_pred             CHhHCcCHHHHHhC
Confidence            99999999999874

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.93  E-value=1.3e-27  Score=226.33  Aligned_cols=156  Identities=18%  Similarity=0.198  Sum_probs=114.4

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEE-------------------cCCeEEEEeccccccccccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVV-------------------TSRWVLQVTDFGLHELRHCA  187 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill-------------------~~~~~~kl~Dfg~a~~~~~~  187 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||+                   +.++.+||+|||+++.....
T Consensus       121 ~~~~~~~i~~--qi~--~~L~~lH~~~i-vH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~  195 (355)
T 2eu9_A          121 PLPHVRHMAY--QLC--HALRFLHENQL-THTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH  195 (355)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHTTTE-ECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCc-ccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc
Confidence            3344445555  788  99999999999 999999999999                   56789999999998764221


Q ss_pred             cCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC---CCCC--------
Q psy16840        188 ENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE---DCEE--------  256 (413)
Q Consensus       188 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~---~~~~--------  256 (413)
                            .....||+.|+|||++.+..+    +.++|||||||++|||++|..||.+.........   ....        
T Consensus       196 ------~~~~~gt~~y~aPE~~~~~~~----~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~  265 (355)
T 2eu9_A          196 ------HTTIVATRHYRPPEVILELGW----AQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHR  265 (355)
T ss_dssp             ------CCSSCSCGGGCCHHHHTTCCC----CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred             ------ccCCcCCCcccCCeeeecCCC----CCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhh
Confidence                  234578999999999988776    8999999999999999999999976431110000   0000        


Q ss_pred             ------------CC--------------CCCc--ccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        257 ------------PF--------------RPNL--ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       257 ------------~~--------------~~~~--~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                                  .+              .+..  .......++.+.+||.+||+.||.+|||+.+++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  334 (355)
T 2eu9_A          266 TRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH  334 (355)
T ss_dssp             CSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             ccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence                        00              0000  00012235689999999999999999999999764

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.93  E-value=2.9e-27  Score=219.32  Aligned_cols=156  Identities=21%  Similarity=0.270  Sum_probs=117.5

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||++......... .......||+.|+|||++
T Consensus       110 ~~~~~~~--qi~--~al~~LH~~~i-~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~  183 (305)
T 2wtk_C          110 QAHGYFC--QLI--DGLEYLHSQGI-VHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD-DTCRTSQGSPAFQPPEIA  183 (305)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSS-CEECCCCSCGGGCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCe-eecCCCcccEEEcCCCcEEeeccccccccCccccc-cccccCCCCCCCcChhhc
Confidence            3344444  777  99999999999 99999999999999999999999998765422211 122345689999999998


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .+...  .++.++||||||+++|+|++|..||.+..............     ...+..+++.+.+++.+||+.||.+||
T Consensus       184 ~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rp  256 (305)
T 2wtk_C          184 NGLDT--FSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGS-----YAIPGDCGPPLSDLLKGMLEYEPAKRF  256 (305)
T ss_dssp             TCCSC--EESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC-----CCCCSSSCHHHHHHHHHHTCSSTTTSC
T ss_pred             cCccc--CCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCC-----CCCCCccCHHHHHHHHHHccCChhhCC
Confidence            76432  12679999999999999999999997643211111110000     112356889999999999999999999


Q ss_pred             ChhHHHHHH
Q psy16840        290 DFPTIRARL  298 (413)
Q Consensus       290 s~~~i~~~l  298 (413)
                      |+.++++..
T Consensus       257 s~~~ll~~~  265 (305)
T 2wtk_C          257 SIRQIRQHS  265 (305)
T ss_dssp             CHHHHHHSH
T ss_pred             CHHHHhcCc
Confidence            999998754

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.93  E-value=6.9e-27  Score=223.08  Aligned_cols=155  Identities=15%  Similarity=0.173  Sum_probs=111.8

Q ss_pred             hhHhhhccccCCchHHhhHhhhcC-CCcccCCCCCCCeEEc------CCeEEEEeccccccccccccCCCcccccccCcc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRS-PIGCHGNLKSSNCVVT------SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL  201 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~-~iiiHrdlkp~Nill~------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~  201 (413)
                      ..+..++.  ||+  .||+|||++ |+ +||||||+|||++      ..+.+||+|||++......      .....||+
T Consensus       131 ~~~~~i~~--qi~--~aL~~lH~~~~i-vH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~~t~  199 (373)
T 1q8y_A          131 IYVKQISK--QLL--LGLDYMHRRCGI-IHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH------YTNSIQTR  199 (373)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTCE-ECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC------CCSCCSCG
T ss_pred             HHHHHHHH--HHH--HHHHHHHhcCCE-EecCCChHHeEEeccCCCcCcceEEEcccccccccCCC------CCCCCCCc
Confidence            33444555  777  999999998 99 9999999999994      4458999999998765321      23347899


Q ss_pred             cccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC-------------------------------
Q psy16840        202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK-------------------------------  250 (413)
Q Consensus       202 ~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-------------------------------  250 (413)
                      .|+|||++.+..+    +.++|||||||++|||++|..||.+.......                               
T Consensus       200 ~y~aPE~~~~~~~----~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  275 (373)
T 1q8y_A          200 EYRSPEVLLGAPW----GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFF  275 (373)
T ss_dssp             GGCCHHHHHTCCC----CTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHB
T ss_pred             cccCcHHHhCCCC----CchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhc
Confidence            9999999988776    99999999999999999999999764311100                               


Q ss_pred             ------CCCCCCCCCCC------cccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        251 ------GEDCEEPFRPN------LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       251 ------~~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                            .........+.      ...++..+++++.+||.+||+.||.+|||+.+++++.
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  335 (373)
T 1q8y_A          276 NSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHP  335 (373)
T ss_dssp             CC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCG
T ss_pred             CCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhCh
Confidence                  00000000000      0011234578899999999999999999999998753

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.93  E-value=1.5e-27  Score=224.37  Aligned_cols=155  Identities=18%  Similarity=0.199  Sum_probs=114.2

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC-------------------CeEEEEecccccccccccc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-------------------RWVLQVTDFGLHELRHCAE  188 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-------------------~~~~kl~Dfg~a~~~~~~~  188 (413)
                      ...+..++.  ||+  .||+|||++|+ +||||||+|||++.                   ++.+||+|||++...... 
T Consensus       117 ~~~~~~~~~--qi~--~~l~~lH~~~i-vH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-  190 (339)
T 1z57_A          117 LDHIRKMAY--QIC--KSVNFLHSNKL-THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-  190 (339)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC-
T ss_pred             HHHHHHHHH--HHH--HHHHHHHHCCC-cCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc-
Confidence            333444555  777  99999999999 99999999999987                   567999999998764321 


Q ss_pred             CCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCC---CC----------
Q psy16840        189 NDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED---CE----------  255 (413)
Q Consensus       189 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~---~~----------  255 (413)
                           .....||+.|+|||++.+..+    +.++|||||||++|||++|..||...+........   ..          
T Consensus       191 -----~~~~~gt~~y~aPE~~~~~~~----~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  261 (339)
T 1z57_A          191 -----HSTLVSTRHYRAPEVILALGW----SQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKT  261 (339)
T ss_dssp             -----CCSSCSCGGGCCHHHHTTSCC----CTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHC
T ss_pred             -----cccccCCccccChHHhhCCCC----CcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Confidence                 234578999999999988776    99999999999999999999999764321100000   00          


Q ss_pred             ----------CCC--------------CC--CcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        256 ----------EPF--------------RP--NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       256 ----------~~~--------------~~--~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                                ..+              .+  .........++.+.+|+.+||+.||.+|||+.++++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  329 (339)
T 1z57_A          262 RKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH  329 (339)
T ss_dssp             SCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             cchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence                      000              00  0000112346789999999999999999999999864

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.93  E-value=4.3e-27  Score=219.17  Aligned_cols=161  Identities=18%  Similarity=0.249  Sum_probs=110.9

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      ..+..++.  ||+  .||.|||++|+ +||||||+|||+++ +.+||+|||++........ ........||+.|+|||+
T Consensus       127 ~~~~~i~~--qi~--~aL~~LH~~~i-vH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~-~~~~~~~~gt~~y~aPE~  199 (313)
T 3cek_A          127 WERKSYWK--NML--EAVHTIHQHGI-VHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTT-SVVKDSQVGTVNYMPPEA  199 (313)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEEET-TEEEECCCSSSCC---------------CCGGGCCHHH
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCc-eecCCCcccEEEEC-CeEEEeeccccccccCccc-cccccCCCCCCCcCCHHH
Confidence            33444555  788  99999999999 99999999999975 7999999999876543221 111234568999999999


Q ss_pred             ccCCCC-------CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC-CCCCCCCCCCCcccccCCChHHHHHHHHHH
Q psy16840        209 LRDTHA-------PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK-GEDCEEPFRPNLELLRDSCEPFVLACMRDC  280 (413)
Q Consensus       209 ~~~~~~-------~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (413)
                      +.+...       ...++.++||||||+++|+|++|..||......... ..........   ..+...++.+.+++.+|
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~  276 (313)
T 3cek_A          200 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI---EFPDIPEKDLQDVLKCC  276 (313)
T ss_dssp             HTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC---CCCCCSCHHHHHHHHHH
T ss_pred             HhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccccc---CCcccchHHHHHHHHHH
Confidence            876211       012388999999999999999999999753211000 0000111111   12345678999999999


Q ss_pred             hccCCCCCCChhHHHHHHH
Q psy16840        281 WAEAPESRPDFPTIRARLK  299 (413)
Q Consensus       281 l~~~P~~Rps~~~i~~~l~  299 (413)
                      |+.||.+|||+.++++...
T Consensus       277 l~~dp~~Rps~~ell~h~~  295 (313)
T 3cek_A          277 LKRDPKQRISIPELLAHPY  295 (313)
T ss_dssp             TCSSTTTSCCHHHHHTSHH
T ss_pred             ccCCcccCcCHHHHhcCcc
Confidence            9999999999999987644

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.93  E-value=8.8e-27  Score=218.63  Aligned_cols=155  Identities=20%  Similarity=0.267  Sum_probs=113.6

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe-EEEEeccccccccccccCCCcccccccCcccccCccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW-VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPEL  208 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  208 (413)
                      .+..++.  ||+  .||+|||++|+ +||||||+|||++.++ .+||+|||+++.......    .....|++.|+|||+
T Consensus       131 ~~~~~~~--qi~--~~l~~lH~~~i-vH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~~~~y~aPE~  201 (330)
T 3nsz_A          131 DIRFYMY--EIL--KALDYCHSMGI-MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE----YNVRVASRYFKGPEL  201 (330)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC----CCSCCSCGGGCCHHH
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCe-eeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc----cccccccccccChhh
Confidence            3444555  888  99999999999 9999999999999776 999999999976543221    234568999999999


Q ss_pred             ccC-CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC--------------------------------CCCCC
Q psy16840        209 LRD-THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK--------------------------------GEDCE  255 (413)
Q Consensus       209 ~~~-~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~--------------------------------~~~~~  255 (413)
                      +.+ ..+    +.++|||||||++|+|++|..||.........                                .....
T Consensus       202 ~~~~~~~----~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (330)
T 3nsz_A          202 LVDYQMY----DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSR  277 (330)
T ss_dssp             HTTCCCC----CTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCC
T ss_pred             hcCCCcC----CchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccc
Confidence            877 334    89999999999999999999999542210000                                00000


Q ss_pred             CCCCC-CcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        256 EPFRP-NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       256 ~~~~~-~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ..+.. ........+++++.+||.+||+.||.+|||+.+++++
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          278 KRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             CCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             cchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            00000 0001123478999999999999999999999999875

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.93  E-value=3.3e-27  Score=216.86  Aligned_cols=147  Identities=16%  Similarity=0.182  Sum_probs=110.6

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-------------------eEEEEeccccccccccccCC
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-------------------WVLQVTDFGLHELRHCAEND  190 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-------------------~~~kl~Dfg~a~~~~~~~~~  190 (413)
                      .+..++.  ||+  .||.|||++|+ +||||||+|||++.+                   ..+||+|||++......   
T Consensus       116 ~~~~i~~--qi~--~al~~lH~~~i-vH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---  187 (289)
T 1x8b_A          116 ELKDLLL--QVG--RGLRYIHSMSL-VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP---  187 (289)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS---
T ss_pred             HHHHHHH--HHH--HHHHHHHhCCE-eecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc---
Confidence            3344444  777  99999999999 999999999999844                   47999999998765321   


Q ss_pred             CcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCh
Q psy16840        191 SIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCE  270 (413)
Q Consensus       191 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (413)
                          ....||+.|+|||++.+...   ++.++|||||||++|+|++|..|+.......   ... ...   .+..+..++
T Consensus       188 ----~~~~gt~~y~aPE~~~~~~~---~~~~~Di~slG~il~~l~~~~~~~~~~~~~~---~~~-~~~---~~~~~~~~~  253 (289)
T 1x8b_A          188 ----QVEEGDSRFLANEVLQENYT---HLPKADIFALALTVVCAAGAEPLPRNGDQWH---EIR-QGR---LPRIPQVLS  253 (289)
T ss_dssp             ----CCCCCCGGGCCHHHHTTCCT---THHHHHHHHHHHHHHHHTTCCCCCSSSHHHH---HHH-TTC---CCCCSSCCC
T ss_pred             ----cccCCCccccChhHhcCCCC---CCchhhHHHHHHHHHHHhcCCCCCcchhHHH---HHH-cCC---CCCCCcccC
Confidence                22358999999999987632   2689999999999999999988764422110   000 111   112335788


Q ss_pred             HHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        271 PFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       271 ~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                      +.+.+++.+||+.||.+|||+.+++++.
T Consensus       254 ~~~~~li~~~l~~dp~~Rps~~~ll~h~  281 (289)
T 1x8b_A          254 QEFTELLKVMIHPDPERRPSAMALVKHS  281 (289)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred             HHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence            9999999999999999999999997653

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.93  E-value=3e-27  Score=220.58  Aligned_cols=161  Identities=16%  Similarity=0.228  Sum_probs=108.1

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcC-CCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRS-PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~-~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      ....+..++.  ||+  .||.|||++ |+ +||||||+|||++.++.+||+|||++.......    ......||+.|+|
T Consensus       122 ~~~~~~~~~~--~i~--~~l~~lH~~~~i-~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~a  192 (318)
T 2dyl_A          122 PERILGKMTV--AIV--KALYYLKEKHGV-IHRDVKPSNILLDERGQIKLCDFGISGRLVDDK----AKDRSAGCAAYMA  192 (318)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHHHCC-CCCCCCGGGEEECTTSCEEECCCTTC------------------CCTTCC
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhhCCE-EeCCCCHHHEEECCCCCEEEEECCCchhccCCc----cccccCCCccccC
Confidence            3334445555  777  999999985 99 999999999999999999999999987653321    1233468999999


Q ss_pred             cccccCCCC-CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHA-PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~-~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++..... ...++.++||||||+++|+|++|..||..................+..+ ....+++++.+++.+||+.|
T Consensus       193 PE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~d  271 (318)
T 2dyl_A          193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLP-GHMGFSGDFQSFVKDCLTKD  271 (318)
T ss_dssp             HHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCC-SSSCCCHHHHHHHHHHTCSC
T ss_pred             hhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCC-ccCCCCHHHHHHHHHHccCC
Confidence            999853211 1123889999999999999999999997632111000000000111111 11357899999999999999


Q ss_pred             CCCCCChhHHHHH
Q psy16840        285 PESRPDFPTIRAR  297 (413)
Q Consensus       285 P~~Rps~~~i~~~  297 (413)
                      |.+|||+.++++.
T Consensus       272 p~~Rps~~~ll~h  284 (318)
T 2dyl_A          272 HRKRPKYNKLLEH  284 (318)
T ss_dssp             TTTSCCHHHHTTS
T ss_pred             hhHCcCHHHHhhC
Confidence            9999999999764

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.93  E-value=2.1e-27  Score=219.22  Aligned_cols=154  Identities=19%  Similarity=0.327  Sum_probs=114.1

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC-CeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+||+++. ++.+||+|||++.......   .......|++.|+|||++
T Consensus       124 ~~~~~~--qi~--~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~  195 (295)
T 2clq_A          124 IGFYTK--QIL--EGLKYLHDNQI-VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN---PCTETFTGTLQYMAPEII  195 (295)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEEETTTCCEEECCTTTCEESCC--------CCCCCCGGGCCHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHhCCE-EccCCChhhEEEECCCCCEEEeecccccccCCCC---CcccccCCCccccChhhh
Confidence            334444  777  99999999999 99999999999997 8999999999987653221   112345689999999998


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-CCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR  288 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R  288 (413)
                      .+...  .++.++||||||+++|+|++|..||.......... ........+   .++..+++++.+++.+||+.||++|
T Consensus       196 ~~~~~--~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~R  270 (295)
T 2clq_A          196 DKGPR--GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP---EIPESMSAEAKAFILKCFEPDPDKR  270 (295)
T ss_dssp             HHGGG--GCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCC---CCCTTSCHHHHHHHHHTTCSSTTTS
T ss_pred             cCCCC--CCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccc---cccccCCHHHHHHHHHHccCChhhC
Confidence            76531  12889999999999999999999996532111000 000001111   2335788999999999999999999


Q ss_pred             CChhHHHHH
Q psy16840        289 PDFPTIRAR  297 (413)
Q Consensus       289 ps~~~i~~~  297 (413)
                      ||+.+++..
T Consensus       271 ps~~~ll~~  279 (295)
T 2clq_A          271 ACANDLLVD  279 (295)
T ss_dssp             CCHHHHHTS
T ss_pred             CCHHHHhcC
Confidence            999999864

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.93  E-value=3.8e-27  Score=217.82  Aligned_cols=161  Identities=16%  Similarity=0.137  Sum_probs=116.9

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+||+++.++.+||+|||++.......    ......|++.|+||
T Consensus       122 ~~~~~~~~~~--qi~--~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aP  192 (298)
T 1phk_A          122 SEKETRKIMR--ALL--EVICALHKLNI-VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE----KLREVCGTPSYLAP  192 (298)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCCTTCEECCTTC----CBCCCCSCGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCc-ccCCCCcceEEEcCCCcEEEecccchhhcCCCc----ccccccCCccccCH
Confidence            3334445555  777  99999999999 999999999999999999999999987654221    12345689999999


Q ss_pred             ccccCCCC--CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        207 ELLRDTHA--PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       207 E~~~~~~~--~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      |++.+...  ...++.++||||||+++|+|++|..||.+...................+ ....+++.+.+++.+||+.|
T Consensus       193 E~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~d  271 (298)
T 1phk_A          193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP-EWDDYSDTVKDLVSRFLVVQ  271 (298)
T ss_dssp             HHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT-TGGGSCHHHHHHHHHHCCSS
T ss_pred             HHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcc-cccccCHHHHHHHHHHccCC
Confidence            99852100  0123889999999999999999999997643211111111111111111 12467889999999999999


Q ss_pred             CCCCCChhHHHHH
Q psy16840        285 PESRPDFPTIRAR  297 (413)
Q Consensus       285 P~~Rps~~~i~~~  297 (413)
                      |.+|||+.++++.
T Consensus       272 p~~Rps~~~ll~h  284 (298)
T 1phk_A          272 PQKRYTAEEALAH  284 (298)
T ss_dssp             GGGSCCHHHHTTS
T ss_pred             cccCCCHHHHHhC
Confidence            9999999999764

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.93  E-value=4.1e-27  Score=215.16  Aligned_cols=150  Identities=18%  Similarity=0.233  Sum_probs=108.3

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  ||+  .||.|||++|+ +||||||+||+++.++.+||+|||++.......    ......|++.|+|||.+.
T Consensus       113 ~~~~~~--qi~--~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~  183 (276)
T 2h6d_A          113 ARRLFQ--QIL--SAVDYCHRHMV-VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----FLRTSCGSPNYAAPEVIS  183 (276)
T ss_dssp             HHHHHH--HHH--HHHHHHHHHCS-SCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----------------CCTGGGT
T ss_pred             HHHHHH--HHH--HHHHHHHHCCC-ccCCCChhhEEECCCCCEEEeecccccccCCCc----ceecccCCccccCHHHHc
Confidence            344444  777  99999999999 999999999999999999999999987654321    123446899999999998


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      +....   +.++||||||+++|+|++|..||...............     ....+..+++.+.+++.+||+.||.+|||
T Consensus       184 ~~~~~---~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rps  255 (276)
T 2h6d_A          184 GRLYA---GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG-----VFYIPEYLNRSVATLLMHMLQVDPLKRAT  255 (276)
T ss_dssp             TSCCC---HHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----CCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCC---CccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC-----cccCchhcCHHHHHHHHHHccCChhhCCC
Confidence            76541   68999999999999999999999764311111000000     01123567889999999999999999999


Q ss_pred             hhHHHHH
Q psy16840        291 FPTIRAR  297 (413)
Q Consensus       291 ~~~i~~~  297 (413)
                      +.++++.
T Consensus       256 ~~~~l~h  262 (276)
T 2h6d_A          256 IKDIREH  262 (276)
T ss_dssp             HHHHHHS
T ss_pred             HHHHHhC
Confidence            9999875

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.93  E-value=4.5e-27  Score=223.46  Aligned_cols=154  Identities=21%  Similarity=0.279  Sum_probs=113.1

Q ss_pred             HhhhccccCCchHHhhHhhhcC-CCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRS-PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~-~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      +..++.  +++  .||.|||++ |+ +||||||+|||++.++.+||+|||++.......     .....||+.|+|||++
T Consensus       133 ~~~i~~--~i~--~~l~~lh~~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~gt~~y~aPE~~  202 (360)
T 3eqc_A          133 LGKVSI--AVI--KGLTYLREKHKI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPERL  202 (360)
T ss_dssp             HHHHHH--HHH--HHHHHHHHHHCC-CCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---------CCCCTTCCHHHH
T ss_pred             HHHHHH--HHH--HHHHHHHHhCCE-EcCCccHHHEEECCCCCEEEEECCCCccccccc-----ccCCCCCCCeECHHHH
Confidence            344444  777  999999986 88 999999999999999999999999987553221     2345789999999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC-----------------C-------CCCCC-------
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE-----------------D-------CEEPF-------  258 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~-----------------~-------~~~~~-------  258 (413)
                      .+..+    +.++|||||||++|+|++|..||...........                 .       .....       
T Consensus       203 ~~~~~----~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (360)
T 3eqc_A          203 QGTHY----SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIF  278 (360)
T ss_dssp             TTCCC----SHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHH
T ss_pred             cCCCC----CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccch
Confidence            88776    9999999999999999999999975431100000                 0       00000       


Q ss_pred             --------CCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        259 --------RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       259 --------~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                              .+........+++++.+||.+||+.||.+|||+.+++++.
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  326 (360)
T 3eqc_A          279 ELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA  326 (360)
T ss_dssp             HHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred             hhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence                    0000001134788999999999999999999999998754

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.93  E-value=3.1e-26  Score=216.55  Aligned_cols=158  Identities=15%  Similarity=0.193  Sum_probs=116.9

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      +....+..++.  ||+  .||.|||+ +|+ +||||||+|||++.++.+||+|||++......     ......|++.|+
T Consensus       148 ~~~~~~~~i~~--qi~--~~l~~lH~~~~i-~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~y~  217 (348)
T 2pml_X          148 IPIQVIKCIIK--SVL--NSFSYIHNEKNI-CHRDVKPSNILMDKNGRVKLSDFGESEYMVDK-----KIKGSRGTYEFM  217 (348)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTSCE-ECCCCCGGGEEECTTSCEEECCCTTCEECBTT-----EECSSCSCGGGC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHhccCCE-eecCCChHhEEEcCCCcEEEeccccccccccc-----cccCCCCCcCcc
Confidence            34444555555  788  99999999 999 99999999999999999999999998765322     233457899999


Q ss_pred             CcccccCC-CCCCCCCc-cchhHHHHHHHHHHHhCCCCCCCCCCCC-CCCCCCCCCCC-C-------------CcccccC
Q psy16840        205 APELLRDT-HAPIRGTQ-KADVYAFAVILHEIIGRRGPFGGCGLYE-PKGEDCEEPFR-P-------------NLELLRD  267 (413)
Q Consensus       205 aPE~~~~~-~~~~~~~~-~~Dv~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~-~-------------~~~~~~~  267 (413)
                      |||++.+. .+    +. ++||||||+++|+|++|..||....... ........... +             .......
T Consensus       218 aPE~~~~~~~~----~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (348)
T 2pml_X          218 PPEFFSNESSY----NGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNN  293 (348)
T ss_dssp             CGGGGSSCCCE----EHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------
T ss_pred             CchhhcCCCCC----CcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchh
Confidence            99999876 33    45 9999999999999999999997654311 00000000000 0             0011124


Q ss_pred             CChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        268 SCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       268 ~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .+++.+.+++.+||+.||.+|||+.+++++
T Consensus       294 ~~~~~l~~li~~~L~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          294 FLSNEDIDFLKLFLRKNPAERITSEDALKH  323 (348)
T ss_dssp             CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             hcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            688999999999999999999999999874

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.93  E-value=6.1e-26  Score=209.99  Aligned_cols=138  Identities=17%  Similarity=0.141  Sum_probs=100.3

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC---CeEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS---RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      ...+..++.  ||+  .||.|||++|+ +||||||+|||++.   ++.+||+|||++....                   
T Consensus       116 ~~~~~~i~~--qi~--~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-------------------  171 (299)
T 3m2w_A          116 EREASEIMK--SIG--EAIQYLHSINI-AHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------------------  171 (299)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-------------------
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCc-ccCCCCHHHEEEecCCCCCcEEEeccccccccc-------------------
Confidence            333444444  777  99999999999 99999999999998   7899999999975431                   


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC---CCCCCCcccccCCChHHHHHHHHHHh
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCE---EPFRPNLELLRDSCEPFVLACMRDCW  281 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl  281 (413)
                            +..+    +.++|||||||++|+|++|..||.+............   ....+........+++++.+++.+||
T Consensus       172 ------~~~~----~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  241 (299)
T 3m2w_A          172 ------GEKY----DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL  241 (299)
T ss_dssp             ------TCGG----GGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHT
T ss_pred             ------cccC----CchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHc
Confidence                  1123    7899999999999999999999976543222111111   11111111122568899999999999


Q ss_pred             ccCCCCCCChhHHHHHHH
Q psy16840        282 AEAPESRPDFPTIRARLK  299 (413)
Q Consensus       282 ~~~P~~Rps~~~i~~~l~  299 (413)
                      +.||.+|||+.+++++..
T Consensus       242 ~~dP~~Rps~~e~l~hp~  259 (299)
T 3m2w_A          242 KTEPTQRMTITEFMNHPW  259 (299)
T ss_dssp             CSSTTTSCCHHHHHTSHH
T ss_pred             ccChhhCCCHHHHhcChh
Confidence            999999999999997543

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.93  E-value=1.7e-26  Score=232.16  Aligned_cols=145  Identities=21%  Similarity=0.199  Sum_probs=107.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe---EEEEeccccccccccccCCCcccccccCcccccCcccccCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAP  215 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  215 (413)
                      |++  .||+|||++|+ +||||||+|||++.++   .+||+|||++.......    ......||+.|+|||++.+..+ 
T Consensus       129 QLl--~aL~yLHs~gI-VHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~----~~~~~~gt~~Y~APE~l~~~~~-  200 (676)
T 3qa8_A          129 DIS--SALRYLHENRI-IHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE----LCTEFVGTLQYLAPELLEQKKY-  200 (676)
T ss_dssp             HHH--HHHHHHHHTTB-CCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC----CCCCCCSCCTTCSSCSSCCSCC-
T ss_pred             HHH--HHHHHHHHCCC-ccCCCCHHHeEeecCCCceeEEEccccccccccccc----ccccccCCcccCChHHhccCCC-
Confidence            666  99999999999 9999999999999664   59999999987654322    1234578999999999988776 


Q ss_pred             CCCCccchhHHHHHHHHHHHhCCCCCCCCCCC------------------CCC-CCCCCCCCCCCcccccCCChHHHHHH
Q psy16840        216 IRGTQKADVYAFAVILHEIIGRRGPFGGCGLY------------------EPK-GEDCEEPFRPNLELLRDSCEPFVLAC  276 (413)
Q Consensus       216 ~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~------------------~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (413)
                         +.++||||||+++|+|++|..||.+....                  ... .........+....+...+++.+.++
T Consensus       201 ---s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dL  277 (676)
T 3qa8_A          201 ---TVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERW  277 (676)
T ss_dssp             ---STTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHH
T ss_pred             ---CchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHH
Confidence               89999999999999999999999653100                  000 00001111122222345578999999


Q ss_pred             HHHHhccCCCCCCChhHH
Q psy16840        277 MRDCWAEAPESRPDFPTI  294 (413)
Q Consensus       277 i~~cl~~~P~~Rps~~~i  294 (413)
                      +.+||..||.+|||+.++
T Consensus       278 I~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          278 LQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             HHHHSCSSCC---CCTTC
T ss_pred             HHHHccCCHhhCcCHHHH
Confidence            999999999999999884

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.93  E-value=1.2e-26  Score=213.41  Aligned_cols=154  Identities=21%  Similarity=0.283  Sum_probs=114.9

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC---eEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      ..+..++.  ||+  .||.|||++|+ +||||||+||+++.+   +.+||+|||++.......    ......|++.|+|
T Consensus       121 ~~~~~i~~--qi~--~~l~~LH~~~i-~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~----~~~~~~~~~~y~a  191 (287)
T 2wei_A          121 HDAARIIK--QVF--SGITYMHKHNI-VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----KMKDRIGTAYYIA  191 (287)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS----SCSCHHHHHTTCC
T ss_pred             HHHHHHHH--HHH--HHHHHHHHCCe-eccCCChhhEEEecCCCcccEEEeccCcceeecCCC----ccccccCcccccC
Confidence            33444555  777  99999999999 999999999999754   479999999987653221    1223457899999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      ||++.+. +    +.++||||||+++|+|++|..||.+.+.................+ ....+++++.+++.+||..||
T Consensus       192 PE~~~~~-~----~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp  265 (287)
T 2wei_A          192 PEVLRGT-Y----DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP-QWRTISDDAKDLIRKMLTFHP  265 (287)
T ss_dssp             HHHHTTC-C----CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSG-GGTTSCHHHHHHHHHHTCSSG
T ss_pred             hHHhcCC-C----CCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCch-hhhhcCHHHHHHHHHHcccCh
Confidence            9998764 4    899999999999999999999997644221111111111111111 124678999999999999999


Q ss_pred             CCCCChhHHHHH
Q psy16840        286 ESRPDFPTIRAR  297 (413)
Q Consensus       286 ~~Rps~~~i~~~  297 (413)
                      .+|||+.++++.
T Consensus       266 ~~Rps~~ell~h  277 (287)
T 2wei_A          266 SLRITATQCLEH  277 (287)
T ss_dssp             GGSCCHHHHHHS
T ss_pred             hhCcCHHHHhcC
Confidence            999999999874

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.92  E-value=1.7e-26  Score=215.06  Aligned_cols=148  Identities=19%  Similarity=0.275  Sum_probs=116.1

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEc-CCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVT-SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      ....+..++.  ||+  .||.|||++|+ +||||||+||+++ .++.+||+|||++.......     .....|++.|+|
T Consensus       137 ~~~~~~~~~~--qi~--~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~y~a  206 (312)
T 2iwi_A          137 GEGPSRCFFG--QVV--AAIQHCHSRGV-VHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP-----YTDFDGTRVYSP  206 (312)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHHTE-ECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC-----BCCCCSCTTTSC
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCe-eecCCChhhEEEeCCCCeEEEEEcchhhhcccCc-----ccccCCcccccC
Confidence            3344445555  788  99999999999 9999999999999 78999999999987654321     234568999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      ||++.+..+.   +.++||||||+++|+|++|..||.......      ..     ...++..+++.+.++|.+||+.||
T Consensus       207 PE~~~~~~~~---~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~-----~~~~~~~~~~~~~~li~~~l~~~p  272 (312)
T 2iwi_A          207 PEWISRHQYH---ALPATVWSLGILLYDMVCGDIPFERDQEIL------EA-----ELHFPAHVSPDCCALIRRCLAPKP  272 (312)
T ss_dssp             HHHHHHSCBC---HHHHHHHHHHHHHHHHHHSSCSCCSHHHHH------HT-----CCCCCTTSCHHHHHHHHHHTCSST
T ss_pred             ceeeecCCCC---CccchHHHHHHHHHHHHHCCCCCCChHHHh------hh-----ccCCcccCCHHHHHHHHHHccCCh
Confidence            9998766541   458999999999999999999996532100      00     011235678899999999999999


Q ss_pred             CCCCChhHHHHHH
Q psy16840        286 ESRPDFPTIRARL  298 (413)
Q Consensus       286 ~~Rps~~~i~~~l  298 (413)
                      ++|||+.++++..
T Consensus       273 ~~Rps~~e~l~~~  285 (312)
T 2iwi_A          273 SSRPSLEEILLDP  285 (312)
T ss_dssp             TTSCCHHHHHHST
T ss_pred             hhCcCHHHHhcCh
Confidence            9999999998753

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.92  E-value=8.5e-27  Score=215.70  Aligned_cols=148  Identities=22%  Similarity=0.279  Sum_probs=103.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccC-----------CCcccccccCcccccCcc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN-----------DSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~~~~~gt~~y~aPE  207 (413)
                      |++  .||+|||++|+ +||||||+|||++.++.+||+|||++........           .........||+.|+|||
T Consensus       124 qi~--~~l~~LH~~~i-~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  200 (303)
T 1zy4_A          124 QIL--EALSYIHSQGI-IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATE  200 (303)
T ss_dssp             HHH--HHHHHHHHTTC-CCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHH
T ss_pred             HHH--HHHHHHHhCCe-ecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcc
Confidence            677  99999999999 9999999999999999999999999876532210           011123456899999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC-CCC--CCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE-PKG--EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ++.+...   ++.++|||||||++|+|++   ||....... ...  ........+   ..+...++.+.+++.+||+.|
T Consensus       201 ~~~~~~~---~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~d  271 (303)
T 1zy4_A          201 VLDGTGH---YNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPP---DFDDNKMKVEKKIIRLLIDHD  271 (303)
T ss_dssp             HHTSCSC---CCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCT---TCCTTTSHHHHHHHHHHTCSS
T ss_pred             cccCCCC---CcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCc---cccccchHHHHHHHHHHHhcC
Confidence            9976532   2899999999999999998   553211000 000  000111111   233567788999999999999


Q ss_pred             CCCCCChhHHHHHH
Q psy16840        285 PESRPDFPTIRARL  298 (413)
Q Consensus       285 P~~Rps~~~i~~~l  298 (413)
                      |.+|||+.++++..
T Consensus       272 p~~Rps~~~ll~h~  285 (303)
T 1zy4_A          272 PNKRPGARTLLNSG  285 (303)
T ss_dssp             GGGSCCHHHHHHSS
T ss_pred             cccCcCHHHHhCCC
Confidence            99999999998753

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.89  E-value=3.8e-24  Score=219.76  Aligned_cols=146  Identities=16%  Similarity=0.154  Sum_probs=111.2

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +.+..+..++.  ||+  .||.|||++|+ +||||||+|||++.+ .+||+|||+++.....       ....||+.|+|
T Consensus       179 l~~~~~~~~~~--qi~--~aL~~lH~~gi-iHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~-------~~~~gt~~y~a  245 (681)
T 2pzi_A          179 LPVAEAIAYLL--EIL--PALSYLHSIGL-VYNDLKPENIMLTEE-QLKLIDLGAVSRINSF-------GYLYGTPGFQA  245 (681)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECSS-CEEECCCTTCEETTCC-------SCCCCCTTTSC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCC-eecccChHHeEEeCC-cEEEEecccchhcccC-------CccCCCccccC
Confidence            44555555666  888  99999999999 999999999999986 8999999998765321       34578999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      ||++.+..     +.++|||||||++|+|++|..||.+......         ....+  ....++.+.++|.+||+.||
T Consensus       246 PE~~~~~~-----~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~---------~~~~~--~~~~~~~l~~li~~~l~~dP  309 (681)
T 2pzi_A          246 PEIVRTGP-----TVATDIYTVGRTLAALTLDLPTRNGRYVDGL---------PEDDP--VLKTYDSYGRLLRRAIDPDP  309 (681)
T ss_dssp             TTHHHHCS-----CHHHHHHHHHHHHHHHHSCCCEETTEECSSC---------CTTCH--HHHHCHHHHHHHHHHTCSSG
T ss_pred             HHHHcCCC-----CCceehhhhHHHHHHHHhCCCCCcccccccc---------ccccc--ccccCHHHHHHHhhhccCCh
Confidence            99987643     7899999999999999999998865321110         01111  12345789999999999999


Q ss_pred             CCCCC-hhHHHHHHHh
Q psy16840        286 ESRPD-FPTIRARLKH  300 (413)
Q Consensus       286 ~~Rps-~~~i~~~l~~  300 (413)
                      .+||+ ++++...|..
T Consensus       310 ~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          310 RQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             GGSCSSHHHHHHHHHH
T ss_pred             hhCCCHHHHHHHHHHH
Confidence            99996 4555554443

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.89  E-value=1.3e-23  Score=193.02  Aligned_cols=127  Identities=11%  Similarity=0.002  Sum_probs=101.1

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+++|.                       ++|       +    
T Consensus       137 ql~--~aL~~lH~~gi-vH~Dikp~NIll~~~g~~kl~~~~~-----------------------~~~-------~----  179 (286)
T 3uqc_A          137 SLA--AAADAAHRAGV-ALSIDHPSRVRVSIDGDVVLAYPAT-----------------------MPD-------A----  179 (286)
T ss_dssp             HHH--HHHHHHHHTTC-CCCCCSGGGEEEETTSCEEECSCCC-----------------------CTT-------C----
T ss_pred             HHH--HHHHHHHHCCC-ccCCCCcccEEEcCCCCEEEEeccc-----------------------cCC-------C----
Confidence            777  99999999999 9999999999999999999985543                       222       2    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---CCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                      +.++|||||||++|+|++|+.||.+.+......   ... ....+........+++++.++|.+||+.||.+| |+.+++
T Consensus       180 ~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~  257 (286)
T 3uqc_A          180 NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDT-AGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLL  257 (286)
T ss_dssp             CHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCT-TSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHh-ccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHH
Confidence            889999999999999999999998765433221   111 111222333456789999999999999999999 999999


Q ss_pred             HHHHhhccc
Q psy16840        296 ARLKHMKDG  304 (413)
Q Consensus       296 ~~l~~~~~~  304 (413)
                      +.|+.+...
T Consensus       258 ~~L~~~~~~  266 (286)
T 3uqc_A          258 NLMQQATAV  266 (286)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHHhcc
Confidence            999887654

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.86  E-value=1.6e-23  Score=196.92  Aligned_cols=146  Identities=9%  Similarity=0.033  Sum_probs=107.2

Q ss_pred             CChhhHhhhccccCCchHHhhHhhh-cCCCcccCCCCCCCeEEcCCe--------------------EEEEecccccccc
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLH-RSPIGCHGNLKSSNCVVTSRW--------------------VLQVTDFGLHELR  184 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH-~~~iiiHrdlkp~Nill~~~~--------------------~~kl~Dfg~a~~~  184 (413)
                      +....+..++.  ||+  .||+||| ++|+ +||||||+|||++.++                    .+||+|||+|+..
T Consensus       158 ~~~~~~~~i~~--qi~--~aL~~lH~~~~i-vHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~  232 (336)
T 2vuw_A          158 SSLATAKSILH--QLT--ASLAVAEASLRF-EHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLE  232 (336)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHHHCC-BCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEE
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHhCCE-eECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEec
Confidence            34555666666  888  9999999 9999 9999999999999886                    9999999999865


Q ss_pred             ccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHH-HHHHHhCCCCCCCCCC----CCCCCCCCCCCCC
Q psy16840        185 HCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVI-LHEIIGRRGPFGGCGL----YEPKGEDCEEPFR  259 (413)
Q Consensus       185 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~i-l~el~~g~~pf~~~~~----~~~~~~~~~~~~~  259 (413)
                      ..        ....||+.|+|||++.+..     +.++||||+|++ .+++++|..||.+...    ............ 
T Consensus       233 ~~--------~~~~gt~~y~aPE~~~g~~-----~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-  298 (336)
T 2vuw_A          233 RD--------GIVVFCDVSMDEDLFTGDG-----DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT-  298 (336)
T ss_dssp             ET--------TEEECCCCTTCSGGGCCCS-----SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSS-
T ss_pred             CC--------CcEEEeecccChhhhcCCC-----ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCc-
Confidence            32        2347899999999998654     779999998776 7788899999854110    000000000111 


Q ss_pred             CCcccccCCChHHHHHHHHHHhccCCCCCCChhHHH
Q psy16840        260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR  295 (413)
Q Consensus       260 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~  295 (413)
                      .........+++++.+||.+||+.|     |+.+++
T Consensus       299 ~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          299 KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             ccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence            1111223468899999999999976     888887

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.76  E-value=1.2e-20  Score=188.78  Aligned_cols=94  Identities=13%  Similarity=0.115  Sum_probs=63.1

Q ss_pred             hccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCC
Q psy16840        134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTH  213 (413)
Q Consensus       134 ~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  213 (413)
                      ++.  ||+  .||+|||++|| |||||||+|||++.+|.+||+|||+|+......   ....+.+||+.|+|||++.+..
T Consensus       344 I~~--QIl--~AL~ylH~~GI-IHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~---~~~~t~vGTp~YmAPE~l~g~~  415 (569)
T 4azs_A          344 ILG--SLL--RSLAALEKQGF-WHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC---SWPTNLVQSFFVFVNELFAENK  415 (569)
T ss_dssp             HHH--HHH--HHHHHHHHTTC-EESCCCGGGEEECTTSCEEECCCTTEESCC------CCSHHHHHHHHHHHHHHC----
T ss_pred             HHH--HHH--HHHHHHHHCCc-eeccCchHhEEECCCCCEEEeecccCeeCCCCC---ccccCceechhhccHHHhCCCC
Confidence            444  888  99999999999 999999999999999999999999998764322   2234568999999999998753


Q ss_pred             CCCCCCccchhHHHHHHHHHHHhCCCC
Q psy16840        214 APIRGTQKADVYAFAVILHEIIGRRGP  240 (413)
Q Consensus       214 ~~~~~~~~~Dv~slG~il~el~~g~~p  240 (413)
                           ..++|+||+|++++++.++..|
T Consensus       416 -----~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          416 -----SWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             ------------------CCCCTTHHH
T ss_pred             -----CCcccccccccchhhhccccch
Confidence                 6789999999998887665444

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.47  E-value=1.5e-15  Score=151.01  Aligned_cols=95  Identities=19%  Similarity=0.235  Sum_probs=77.2

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCc----ccccccCcccccCcccccC--C
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI----GEHQYYRSLLWKAPELLRD--T  212 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~  212 (413)
                      |++  .||.|||++++ +||||||+|||++.  .+||+|||+++..........    ......||+.|+|||++..  .
T Consensus       439 qi~--~aL~~LH~~gI-iHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~  513 (540)
T 3en9_A          439 KIG--EIVGKLHKNDV-IHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLE  513 (540)
T ss_dssp             HHH--HHHHHHHHTTE-ECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred             HHH--HHHHHHHHCcC-ccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHH
Confidence            788  99999999999 99999999999998  999999999987643221110    1235678999999999987  4


Q ss_pred             CCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q psy16840        213 HAPIRGTQKADVYAFAVILHEIIGRRGPFG  242 (413)
Q Consensus       213 ~~~~~~~~~~Dv~slG~il~el~~g~~pf~  242 (413)
                      .+    +..+|+||..+-..+-..++.+|.
T Consensus       514 ~Y----~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          514 GY----KSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HH----HHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             HH----HHHHhHHHHHHHHHHHHHhccccC
Confidence            44    778899999998888888777763

>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B

Probab=99.27  E-value=1.9e-12  Score=110.79  Aligned_cols=66  Identities=53%  Similarity=0.799  Sum_probs=60.8

Q ss_pred             CcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcceeEEEEEeccc
Q psy16840          2 PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGAT   67 (413)
Q Consensus         2 p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~~~~~~l~~~~   67 (413)
                      ++|++|||+||+|+|||+.+.|++|++|++++..+.+...|.++++|.+.+||++++.+||+....
T Consensus       123 ~~~~v~G~~Vn~Aarl~~~a~~~~I~vs~~~~~~l~~~~~~~~~~~g~~~lkG~~~~~~y~l~~~~  188 (190)
T 3et6_A          123 PRFXLFGDTVNTASRMESHGEAGQIHISEACYCCLRSKERFEIRERGNITVKGKGTMRTYLLSPLE  188 (190)
T ss_dssp             CEEEEESHHHHHHHHHHHTSCTTSEEEEHHHHHHCSCGGGTCCCCEEEECCSSSSCEEEEEECCC-
T ss_pred             ceEEecCcchhHHHHHHhcCCCCeEEECHHHHHHhCcCCceEEEEcCCEEecCCCeEEEEEEeccc
Confidence            689999999999999999999999999999999998755699999999999999999999987543

>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B*

Probab=99.26  E-value=1.2e-12  Score=114.69  Aligned_cols=68  Identities=38%  Similarity=0.668  Sum_probs=44.7

Q ss_pred             CCcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcceeEEEEEeccccc
Q psy16840          1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGATEG   69 (413)
Q Consensus         1 ~p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~~~~~~l~~~~~~   69 (413)
                      +|+||+|||+||+|+|||+.+.|++|++|++|++.|.+. .|.++++|.+.+||++++.+||+.+....
T Consensus       144 r~~y~v~Gd~VN~AaRle~~a~~g~I~vS~~~~~~l~~~-~~~~~~~g~~~lKG~~~~~~~~~~~~~~~  211 (220)
T 1ab8_A          144 KPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTL-GYTCTCRGIINVKGKGDLKTYFVNTEMSR  211 (220)
T ss_dssp             SCEEEEESHHHHHHHHHHHTCCTTCEEECHHHHHHHHHH-TCCCCC---------------CCC-----
T ss_pred             ceeEEEECcHHHHHHHHHhcCCCCeEEECHHHHHHhhcC-ceEEEEeccEEecCCCceEEEEEecccCC
Confidence            478999999999999999999999999999999999874 39999999999999999999998776544

>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A*

Probab=99.19  E-value=7.1e-12  Score=118.47  Aligned_cols=66  Identities=23%  Similarity=0.343  Sum_probs=58.3

Q ss_pred             ccccCchhhhhhhhhhcCCCCceeccHHHHHHHhcc---CCcceeecceEeecCc-ceeEEEEEeccccc
Q psy16840          4 YCLFGDTVNTASRMESTGEPLRIHISPACKAALDKL---GGYIVEERGVVCMKGK-GEVLTYWLVGATEG   69 (413)
Q Consensus         4 y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~---~~~~~~~~g~v~~kg~-g~~~~~~l~~~~~~   69 (413)
                      ||+||||||+|||||+.+.|++|+||++|++.|.+.   +.|.++++|.+.+||+ +.+.+||+.+....
T Consensus       311 ydv~GdtVN~AsRLes~a~~g~I~vS~~t~~~l~~~~~~~~f~~~~~G~v~lKGk~~~v~~y~l~~~~~~  380 (407)
T 1y10_A          311 GDWFGSPVNVASRVTGVARPGAVLVADSVREALGDAPEADGFQWSFAGPRRLRGIRGDVRLFRVRRGATR  380 (407)
T ss_dssp             TEEEEHHHHHHHHHHHHCCTTCEEEEHHHHHSCCCC---CCCEEEEEEEECCTTCCSCEEEEEEEC----
T ss_pred             CccCCCHHHHHHHHHhcCCCCeEEECHHHHHHHhcccccCceEEEEeceEEeCCCCCceEEEEEcccCCC
Confidence            899999999999999999999999999999999884   4699999999999998 88999999876553

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.17  E-value=3.9e-12  Score=115.91  Aligned_cols=53  Identities=19%  Similarity=0.108  Sum_probs=46.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      |++  .||.|||++|+ +||||||+|||++ ++.+||+|||+|..                +..+.|||.+..
T Consensus       201 qi~--~~l~~lH~~gi-iHrDlkp~NILl~-~~~vkl~DFG~a~~----------------~~~~~a~e~l~r  253 (282)
T 1zar_A          201 MIL--EEVAKFYHRGI-VHGDLSQYNVLVS-EEGIWIIDFPQSVE----------------VGEEGWREILER  253 (282)
T ss_dssp             HHH--HHHHHHHHTTE-ECSCCSTTSEEEE-TTEEEECCCTTCEE----------------TTSTTHHHHHHH
T ss_pred             HHH--HHHHHHHHCCC-EeCCCCHHHEEEE-CCcEEEEECCCCeE----------------CCCCCHHHHHHH
Confidence            777  99999999999 9999999999999 99999999999753                234678888753

>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B

Probab=99.16  E-value=2e-11  Score=106.60  Aligned_cols=67  Identities=45%  Similarity=0.723  Sum_probs=59.1

Q ss_pred             CCcccccCchhhhhhhhhhcCCCCceeccHHHHHHHh----ccCCcceeecceEeecCcceeEEEEEeccc
Q psy16840          1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALD----KLGGYIVEERGVVCMKGKGEVLTYWLVGAT   67 (413)
Q Consensus         1 ~p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~----~~~~~~~~~~g~v~~kg~g~~~~~~l~~~~   67 (413)
                      +|+||+|||+||+|+|||+.+.|++|++|++|++.+.    ....|.++++|.+.+||++++..+|.+...
T Consensus       130 ~~~~~v~Gd~VN~AaRLe~~a~~~~IlvS~~~~~~l~~~~~~~~~~~~~~~g~~~lKG~~~~~~vy~l~~~  200 (219)
T 2wz1_A          130 MPRYCLFGNTVNLTSRTETTGEKGKINVSEYTYRCLMSPENSDPQFHLEHRGPVSMKGKKEPMQVWFLSRK  200 (219)
T ss_dssp             SCEEEEESHHHHHHHHHHHTSCTTSEEEEHHHHHHTTSTTTCCTTEEEEEEEEECCTTCSSCEEEEEEEES
T ss_pred             ceEEEEECHHHHHHHHHHhcCCCCeEEECHHHHHHHhhhcccCCceEEEEeCCEEecCCCccEEEEEEecc
Confidence            3789999999999999999999999999999999997    234599999999999999998877766543

>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis}

Probab=99.14  E-value=8.8e-12  Score=107.72  Aligned_cols=66  Identities=39%  Similarity=0.679  Sum_probs=61.3

Q ss_pred             CcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcceeEEEEEeccccc
Q psy16840          2 PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLVGATEG   69 (413)
Q Consensus         2 p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~~~~~~l~~~~~~   69 (413)
                      ++|++|||+||+|+|||+.+.|++|++|+++++.+.+.  |.++++|.+.+||++++..||+.+....
T Consensus       123 ~~~~v~G~~Vn~AaRle~~a~~g~I~vs~~~~~~l~~~--~~~~~~g~~~lkG~~~~~~y~l~~~~~~  188 (204)
T 1yk9_A          123 FRYCVWGDAVNVASRMESTDSVGQIQVPDEVYERLKDD--FVLRERGHINVKGKGVMRTWYLIGRKVA  188 (204)
T ss_dssp             CCCCEEEHHHHHTTHHHHSCSTTCEEBCHHHHHCCTTC--EEEEECCCCCCSSSSSCCCCEEEEEECC
T ss_pred             ceEEEEChHHHHHHHHHhcCCCCeEEECHHHHHHhhcC--eeEEEcceEEecCCCccEEEEEEeccCC
Confidence            68999999999999999999999999999999999974  9999999999999999999999876553

>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A

Probab=99.07  E-value=6.9e-11  Score=104.64  Aligned_cols=65  Identities=22%  Similarity=0.283  Sum_probs=56.7

Q ss_pred             CCcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhcc--CCcceeecceEeecCcceeEEEEEec
Q psy16840          1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKL--GGYIVEERGVVCMKGKGEVLTYWLVG   65 (413)
Q Consensus         1 ~p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~--~~~~~~~~g~v~~kg~g~~~~~~l~~   65 (413)
                      .++||+|||+||+|+|||+.+.|++|++|++|++.+.+.  +.|.++.+|.+.+||+++....|.+.
T Consensus       151 ~~~~~v~Gd~VN~AaRle~~a~~g~IlvS~~~~~~l~~~~~~~~~~~~~g~~~lkG~~~~v~vy~l~  217 (235)
T 1fx2_A          151 TKGYDYYGRTPNMAARTESVANGGQVLMTHAAYMSLSAEDRKQIDVTALGDVALRGVSDPVKMYQLN  217 (235)
T ss_dssp             SSSEEEESHHHHHHHHHHHTCCTTCEEEEHHHHHTSCHHHHHTCCEEEEEEECCTTCSSCEEEEEEC
T ss_pred             ccceEEECHHHHHHHHHHhhcCCCEEEECHHHHHHHhhhcccCceeEecccEEecccCCceEEEEEe
Confidence            378999999999999999999999999999999999642  35999999999999999776555543

>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens}

Probab=99.07  E-value=5e-11  Score=104.60  Aligned_cols=67  Identities=30%  Similarity=0.511  Sum_probs=58.0

Q ss_pred             CCcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcc----eeEEEEEeccc
Q psy16840          1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKG----EVLTYWLVGAT   67 (413)
Q Consensus         1 ~p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g----~~~~~~l~~~~   67 (413)
                      +|+||+|||+||+|+|||+.+.|++|++|++||+.|.+.+.|.++++|.+.+|++.    .+.+|++....
T Consensus       126 ~~~~~~~Gd~VN~AaRle~~a~~~~I~vS~~~~~~l~~~~~~~~~~~g~~~lk~~~~~~~~~~~y~l~~~~  196 (225)
T 3uvj_A          126 MPRYCLFGNNVTLANKFESCSVPRKINVSPTTYRLLKDCPGFVFTPRSREELPPNFPSEIPGICHFLDAYQ  196 (225)
T ss_dssp             CCEEEEESHHHHHHHHHHHTSCTTCEEECHHHHHHHTTSTTEEEEECCSTTSCTTSCTTSCCCCEEEEEEC
T ss_pred             CceEEEECcHHHHHHHHHhcCCCCeEEECHHHHHhhcCCCceEEEEcCcEEecCCCCCCCceEEEEEeccc
Confidence            47899999999999999999999999999999999999777999999999995432    44578776544

>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi}

Probab=99.03  E-value=2.2e-10  Score=97.75  Aligned_cols=66  Identities=23%  Similarity=0.266  Sum_probs=57.6

Q ss_pred             cccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcceeE-EEEEecccc
Q psy16840          3 RYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVL-TYWLVGATE   68 (413)
Q Consensus         3 ~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~~~-~~~l~~~~~   68 (413)
                      .|++|||+||+|+||++.+.|++|.+|++++..+.+...|.++++|.+.+||+++.. .|++.+...
T Consensus       109 ~~~~~G~~Vn~AaRl~~~a~~~~I~vs~~~~~~l~~~~~~~~~~~g~~~lkG~~~~v~vy~~~~~~~  175 (189)
T 3mr7_A          109 DGDIFGDAVNVAARLEAISEPGAICVSDIVHQITQDRVSEPFTDLGLQKVKNITRPIRVWQWVPDAD  175 (189)
T ss_dssp             SSCEESHHHHHHHHHHHHSCTTCEEEEHHHHHHHTTTCCSCCEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred             CCeEEChHHHHHHHHHhhCCCCeEEECHHHHHhhccccCceEEECCCEEeCCcCCcEEEEEEccccc
Confidence            589999999999999999999999999999999998766999999999999999855 566554443

>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0

Probab=98.99  E-value=2.9e-10  Score=97.84  Aligned_cols=63  Identities=29%  Similarity=0.457  Sum_probs=55.9

Q ss_pred             CcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcceeEE-EEEecc
Q psy16840          2 PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLT-YWLVGA   66 (413)
Q Consensus         2 p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~~~~-~~l~~~   66 (413)
                      +.|++|||+||+|+||++.+.|++|++|+++++.+.+.  |.++++|.+.+||+++... |.+.+.
T Consensus       130 ~~~~v~G~~Vn~Aarl~~~a~~~~I~vs~~~~~~l~~~--~~~~~~g~~~lkG~~~p~~vy~v~~~  193 (198)
T 3r5g_A          130 MDYTIIGREVNLASRLESASEAGEILISHETYSLIKDV--IMCRDKGQIAVKGFSRPVQIYQVVDS  193 (198)
T ss_dssp             EEEEEESHHHHHHHHHHHHCCTTCEEEEHHHHHHHTTT--SCEEEEEEECCTTCSSCEEEEEECCC
T ss_pred             eEEEEECcHHHHHHHHHhhCCCCcEEECHHHHHHhhcC--ceEEEcccEEeecCCCcEEEEEEeee
Confidence            47999999999999999999999999999999999975  8999999999999988655 444443

>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A*

Probab=98.96  E-value=4.9e-11  Score=103.90  Aligned_cols=64  Identities=27%  Similarity=0.374  Sum_probs=53.2

Q ss_pred             CcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecc----eEeecCcceeEEEEEecccc
Q psy16840          2 PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERG----VVCMKGKGEVLTYWLVGATE   68 (413)
Q Consensus         2 p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g----~v~~kg~g~~~~~~l~~~~~   68 (413)
                      |+||+|||+||+|+|||+.+.|++|++|++|+..|.+.  |.+++.+    .+.+||++ +.+||+.+...
T Consensus       147 ~~y~v~Gd~VN~AaRLe~~a~~g~IlvS~~t~~~l~~~--f~~~~~~~~~r~~~lKg~~-v~~Y~l~~~~~  214 (220)
T 1azs_A          147 WQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLNGD--YEVEPGCGGERNAYLKEHS-IETFLILRCTQ  214 (220)
T ss_dssp             CCCEEESHHHHHHHHHHHTCCTTSEEECSTTTTTTTTC--SCEEECCGGGTCHHHHHTT-CCCEEEC----
T ss_pred             cEEEEEchHHHHHHHHHhcCCCCeEEECHHHHHhhcCc--eEEEECcCccccceecCCc-eEEEEEecccc
Confidence            68999999999999999999999999999999999875  8888842    34688887 78999886654

>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP}

Probab=98.95  E-value=4.5e-10  Score=97.35  Aligned_cols=65  Identities=28%  Similarity=0.295  Sum_probs=57.6

Q ss_pred             CcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcce-eEEEEEecccc
Q psy16840          2 PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGE-VLTYWLVGATE   68 (413)
Q Consensus         2 p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~-~~~~~l~~~~~   68 (413)
                      +.|++|||+||+|+|||+.+.|++|++|++|++.+.+.  |.++..|.+.+||+.+ +..|++.+...
T Consensus       132 ~~~~v~G~~Vn~AaRl~~~a~~~~I~vs~~~~~~l~~~--~~~~~~~~~~lkG~~~~~~vy~v~~~~~  197 (208)
T 2w01_A          132 TKYGVVGAQVNLTYRIESYTTGGQIFISSTTLEAAGDR--VHVNGNRTVQPKGVKDPVVIWDVAGVGE  197 (208)
T ss_dssp             EEEEEESHHHHHHHHHHHTCCTTCEEEEHHHHHHHCTT--EEEEEEEEECCTTCSSCEEEEEEEEECT
T ss_pred             eEEEEECHHHHHHHHHHccCCCCeEEECHHHHHhhhcc--eEecccceEeecCCCCcEEEEEEccCCc
Confidence            67999999999999999999999999999999999985  9999999999999875 45677766544

>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A*

Probab=98.93  E-value=3.2e-10  Score=98.97  Aligned_cols=60  Identities=20%  Similarity=0.314  Sum_probs=52.9

Q ss_pred             CcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcceeEEEEEe
Q psy16840          2 PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLV   64 (413)
Q Consensus         2 p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~~~~~~l~   64 (413)
                      +.|++|||+||+|+|||+.+.|++|.+|+++++.|.+   +.++++|.+.+||+++....|.+
T Consensus       153 ~~y~v~Gd~VN~AaRLe~~a~~g~IlvS~~~~~~l~~---~~~~~~g~~~lKG~~~~v~vy~v  212 (219)
T 1wc3_A          153 SDFTAIGPSVNIAARLQEATAPNSIMVSAMVAQYVPD---EEIIKREFLELKGIDEPVMTCVI  212 (219)
T ss_dssp             EEEEEESHHHHHHHHHHHHSCTTEEEEEHHHHTTSCG---GGEEEEEEECCTTCSSCEEEEEE
T ss_pred             eEEEEECHHHHHHHHHHhcCCCCeEEECHHHHHhhcc---cceeEeeeEEecccCCcEEEEEE
Confidence            6899999999999999999999999999999999887   46889999999999865544433

>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A*

Probab=98.91  E-value=8e-10  Score=93.66  Aligned_cols=62  Identities=18%  Similarity=0.155  Sum_probs=53.7

Q ss_pred             cccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcceeE-EEEEec
Q psy16840          3 RYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVL-TYWLVG   65 (413)
Q Consensus         3 ~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~~~-~~~l~~   65 (413)
                      .|++|||+||+|+||++.+.|++|++|+++++.+.+. .|.++.+|.+.+||+++.. .|++.+
T Consensus       115 ~~~~~G~~Vn~AaRl~~~a~~g~IlvS~~~~~~l~~~-~~~~~~~g~~~lkG~~~~~~vy~l~~  177 (184)
T 1ybt_A          115 GTDVAGVAVHIGARVCALAGPSEVLVSSTVRDIVAGS-RHRFAERGEQELKGVPGRWRLCVLMR  177 (184)
T ss_dssp             CEEEESHHHHHHHHHHHHSCTTCEEEEHHHHHHTTTS-SCCEEEEEEECCTTSSSCEEEEEECC
T ss_pred             CceEECcHHHHHHHHHhcCCCCEEEECHHHHHhhccc-CceEEEcCCEEecCCCCcEEEEEEec
Confidence            3899999999999999999999999999999999542 4999999999999987555 555544

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.80  E-value=1.6e-09  Score=97.29  Aligned_cols=41  Identities=17%  Similarity=0.229  Sum_probs=37.8

Q ss_pred             CCchHHhhHhhh-cCCCcccCCCCCCCeEEcCCeEEEEecccccccc
Q psy16840        139 DGIPRQGMTFLH-RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR  184 (413)
Q Consensus       139 ~i~~a~gL~yLH-~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~  184 (413)
                      |++  .||.||| +.|+ +||||||+|||++.  .++|+|||+|...
T Consensus       178 qi~--~~l~~lH~~~gi-vHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          178 DVV--ENVKRLYQEAEL-VHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             HHH--HHHHHHHHTSCE-ECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             HHH--HHHHHHHHHCCE-EeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            777  9999999 9999 99999999999998  8999999998653

>3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus}

Probab=98.59  E-value=2.5e-07  Score=62.79  Aligned_cols=54  Identities=26%  Similarity=0.334  Sum_probs=45.4

Q ss_pred             HHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHHhcCCHHHHHHHhcC
Q psy16840        318 EKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRG  375 (413)
Q Consensus       318 ~~~~~~~~~~~~~le~~~~~le~~~~e~~~~l~~e~~~~~~ll~~~lp~~va~~lk~g  375 (413)
                      ..+...-..+...+|+++.+|+    +++.++.+|++++|.||++|+|++||++|+.|
T Consensus        13 ~~q~~ae~~L~~~lE~~~~~Le----e~t~~L~~EK~ktd~LL~~mLP~~VA~~Lk~G   66 (66)
T 3hls_A           13 GEQFREEYKLTQELEMLTDRLQ----LTLRALEDEKKKTDTLLYSVLPPSVANELRHK   66 (66)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTSCHHHHHHHHC-
T ss_pred             hhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHcCCHHHHHHHhCc
Confidence            3344445667788899998887    78899999999999999999999999999986

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.29  E-value=1.7e-07  Score=88.02  Aligned_cols=41  Identities=17%  Similarity=0.184  Sum_probs=36.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe----------EEEEecccccc
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW----------VLQVTDFGLHE  182 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~----------~~kl~Dfg~a~  182 (413)
                      ||+  .||.|||+.|+ |||||||.|||++.++          .+.|+||+-+-
T Consensus       213 qll--~~l~~lH~~gI-VHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          213 DLI--ALILRLAKHGL-IHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             HHH--HHHHHHHHTTE-ECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred             HHH--HHHHHHHHCCC-cCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence            777  99999999998 9999999999998776          48999999753

>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A*

Probab=98.16  E-value=5.4e-07  Score=85.14  Aligned_cols=74  Identities=20%  Similarity=0.300  Sum_probs=59.7

Q ss_pred             HhHHHHHHHHHHHHHHHHHhHHHHHHhcCC-------HHHHHHHhcCCCC------------CCCccCeEEEEecccccc
Q psy16840        336 NNLEDLVNQRTMEVYEEKRKTEDLLHRMLP-------APVASRLTRGYGV------------EPESYDLVTIYFSDIVGF  396 (413)
Q Consensus       336 ~~le~~~~e~~~~l~~e~~~~~~ll~~~lp-------~~va~~lk~g~~v------------~~e~~~~vti~fsdi~gf  396 (413)
                      ..++.++.+...+ .+++++.+.+|.+++|       +.++.+++++...            ....+..|||+|+||+||
T Consensus       148 ~~le~l~~~~~~~-~ee~~kse~LL~~iLP~L~~~l~~~va~~L~~~~~~~~v~~~~r~~~~~~~~~~~vTVlFaDIvgF  226 (407)
T 1y10_A          148 TALEAIMRPGATE-LDIAKGSQALVSQIVPLLGPMIQDMLFMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGF  226 (407)
T ss_dssp             HHHHHHCCTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCTTCEEEEEEEEEECSB
T ss_pred             HHHHHhccCCCCc-HhHHHHHHHHHHHhcccccccchHHHHHHHHhcccchhhhhhhhcccccccceeeEEEEEEEccCc
Confidence            4567776666544 4677899999999999       8999999987542            123589999999999999


Q ss_pred             ccccCCCCCCcccC
Q psy16840        397 TAMSAESTPLERPV  410 (413)
Q Consensus       397 t~~~~~~~p~~~~~  410 (413)
                      |.+|+..+|.+++.
T Consensus       227 T~ls~~~~p~evv~  240 (407)
T 1y10_A          227 TQLGEVVSAEELGH  240 (407)
T ss_dssp             CTTSCBCCHHHHHH
T ss_pred             hHHHhhCCHHHHHH
Confidence            99999999988763

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.85  E-value=0.00041  Score=61.33  Aligned_cols=29  Identities=21%  Similarity=0.249  Sum_probs=25.5

Q ss_pred             CcccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        154 IGCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       154 iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      + +|+|++|.||++++++.+.|+|||.+..
T Consensus       186 l-~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          186 V-THGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             E-ECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             E-ECCCCCCCcEEEECCcEEEEEcchhccc
Confidence            5 9999999999999887788999998643

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=96.71  E-value=0.00014  Score=66.44  Aligned_cols=81  Identities=17%  Similarity=0.190  Sum_probs=48.0

Q ss_pred             cccCCCCCCCeEEcC--CeEEEEeccccccccccccCCCcccccc---cCc-------ccc--cC-cccccCCCCCCCCC
Q psy16840        155 GCHGNLKSSNCVVTS--RWVLQVTDFGLHELRHCAENDSIGEHQY---YRS-------LLW--KA-PELLRDTHAPIRGT  219 (413)
Q Consensus       155 iiHrdlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~---~gt-------~~y--~a-PE~~~~~~~~~~~~  219 (413)
                      ++|+|++|.||+++.  ...+.|+||+.+....... +.......   .+.       ..|  .. |+.....      .
T Consensus       193 ~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~-Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~------~  265 (304)
T 3sg8_A          193 LIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN-DFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKY------R  265 (304)
T ss_dssp             EECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH-HHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHH------H
T ss_pred             eEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH-HHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHH------H
Confidence            399999999999998  6778999999876532110 00000000   000       001  11 1211111      1


Q ss_pred             ccchhHHHHHHHHHHHhCCCCCC
Q psy16840        220 QKADVYAFAVILHEIIGRRGPFG  242 (413)
Q Consensus       220 ~~~Dv~slG~il~el~~g~~pf~  242 (413)
                      ...+.|++|.++|.+.+|..+|.
T Consensus       266 ~~~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          266 MKEKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCHHHH
Confidence            23689999999999999988763

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.50  E-value=0.00094  Score=59.27  Aligned_cols=28  Identities=32%  Similarity=0.329  Sum_probs=24.4

Q ss_pred             cccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        155 GCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       155 iiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      ++|+|++|.||+++++..+.|+||+.+.
T Consensus       185 l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          185 FSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             EECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EECCCCCcCcEEEECCcEEEEEEchhcc
Confidence            3899999999999887777899999764

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=95.78  E-value=0.18  Score=42.79  Aligned_cols=103  Identities=6%  Similarity=-0.080  Sum_probs=64.8

Q ss_pred             CCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhC
Q psy16840        158 GNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR  237 (413)
Q Consensus       158 rdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g  237 (413)
                      +=+.|..|++..+|.|.+.+ +.+.               .....+.|||..... .    +.+.=|||||+++|.-+--
T Consensus        74 ~i~~~~~i~l~~dG~V~f~~-~~s~---------------~~~~~~~~pe~~~~~-~----te~~~IysLG~tLY~ALDy  132 (229)
T 2yle_A           74 RVRSAAQIRVWRDGAVTLAP-AADD---------------AGEPPPVAGKLGYSQ-C----METEVIESLGIIIYKALDY  132 (229)
T ss_dssp             CCCSGGGEEEETTSCEEECC-C---------------------------CCSSSS-S----CHHHHHHHHHHHHHHHHTT
T ss_pred             eecCCcceEEecCCceeccc-cccc---------------ccccCCCChhhcccc-c----hHHHHHHHHHHHHHHHhhc
Confidence            33467899999998887664 2110               112346788886422 2    6788899999999998853


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc-------------------------CCCCCCChh
Q psy16840        238 RGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE-------------------------APESRPDFP  292 (413)
Q Consensus       238 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~-------------------------~P~~Rps~~  292 (413)
                      ..|-                   .   .+..+++.+..||..|.+.                         .+..|++++
T Consensus       133 gL~e-------------------~---eE~eLS~~LE~LL~~Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~  190 (229)
T 2yle_A          133 GLKE-------------------N---EERELSPPLEQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYR  190 (229)
T ss_dssp             TCCT-------------------T---EEECCCHHHHHHHHHHTTCCC--------------------CCSCCCCCCSHH
T ss_pred             CCCc-------------------c---cchhhCHHHHHHHHHHHhcccccccccccccccccccccccccccccCcCCHH
Confidence            2221                   1   1256889999999999765                         346889999


Q ss_pred             HHHHHHHhhcc
Q psy16840        293 TIRARLKHMKD  303 (413)
Q Consensus       293 ~i~~~l~~~~~  303 (413)
                      +|++.-..-..
T Consensus       191 ~Vi~~C~~hl~  201 (229)
T 2yle_A          191 DVMKLCAAHLP  201 (229)
T ss_dssp             HHHHHHHTTSS
T ss_pred             HHHHHHHhhcc
Confidence            99876655444

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=95.72  E-value=0.0031  Score=58.80  Aligned_cols=29  Identities=31%  Similarity=0.409  Sum_probs=24.4

Q ss_pred             cccCCCCCCCeEEcCCe--EEEEeccccccc
Q psy16840        155 GCHGNLKSSNCVVTSRW--VLQVTDFGLHEL  183 (413)
Q Consensus       155 iiHrdlkp~Nill~~~~--~~kl~Dfg~a~~  183 (413)
                      ++|||++|.|||++.++  .+.|.||+.+..
T Consensus       218 lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          218 IVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             EECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             EEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence            49999999999999764  479999998653

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=94.56  E-value=0.019  Score=52.71  Aligned_cols=29  Identities=17%  Similarity=0.331  Sum_probs=25.6

Q ss_pred             CCCcccCCCCCCCeEEcCCeEEEEeccccc
Q psy16840        152 SPIGCHGNLKSSNCVVTSRWVLQVTDFGLH  181 (413)
Q Consensus       152 ~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a  181 (413)
                      ..+ +|+|+++.|||++.++.+.|+||+.+
T Consensus       222 ~~l-~HgD~~~~Nil~~~~~~~~lIDfe~a  250 (346)
T 2q83_A          222 PNL-CHQDYGTGNTLLGENEQIWVIDLDTV  250 (346)
T ss_dssp             CCE-ECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred             Cce-ecCCCCcccEEEeCCCcEEEEehhhc
Confidence            455 99999999999987788999999975

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=92.79  E-value=0.036  Score=52.77  Aligned_cols=32  Identities=25%  Similarity=0.321  Sum_probs=27.0

Q ss_pred             hcCCCcccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        150 HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       150 H~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      +...+ +|||++|.|||++.++ ++|.||+.+..
T Consensus       230 ~~~~l-iHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQAL-IHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEE-ECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCCeE-EecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            34556 9999999999999876 99999998754

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=92.57  E-value=0.067  Score=47.24  Aligned_cols=29  Identities=17%  Similarity=0.288  Sum_probs=25.3

Q ss_pred             cccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        155 GCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       155 iiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      ++|+|+.|.||+++.++.+-|.||+.+..
T Consensus       195 l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          195 VTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEcCCCCCCeEEEECCeEEEEEECccccc
Confidence            38999999999999888788999998643

>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A*

Probab=92.57  E-value=0.01  Score=51.12  Aligned_cols=44  Identities=27%  Similarity=0.269  Sum_probs=29.8

Q ss_pred             HHHHHHHhcC-CCCCCCccCeEEEEeccccccccccCCCCCCccc
Q psy16840        366 APVASRLTRG-YGVEPESYDLVTIYFSDIVGFTAMSAESTPLERP  409 (413)
Q Consensus       366 ~~va~~lk~g-~~v~~e~~~~vti~fsdi~gft~~~~~~~p~~~~  409 (413)
                      ...+.+.... ...-++.+..+||+|+||+|||.+++...|-+++
T Consensus        14 ~~~~~~~~~~~~~l~~~~~~~vtvlF~DI~gfT~l~e~~~~~~~~   58 (220)
T 1azs_A           14 DINAKQEDMMFHKIYIQKHDNVSILFADIEGFTSLASQCTAQELV   58 (220)
T ss_dssp             -------CCSSCCCEEEEEEEEEEEEEEEETHHHHHHHSCHHHHH
T ss_pred             cccccccccccccccccccccEEEEEEEccChHHHHhhCCHHHHH
Confidence            3445555543 3344677899999999999999999998887765

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=91.64  E-value=0.078  Score=48.22  Aligned_cols=29  Identities=17%  Similarity=0.172  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       153 ~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      ++ +|+|+.+.|||++++..+.|+||+.+.
T Consensus       188 ~l-iHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          188 GV-IHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EE-ECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cc-CCCCCCccCEEEeCCceEEEecchhcc
Confidence            45 999999999999988777899999753

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=91.03  E-value=0.094  Score=48.46  Aligned_cols=30  Identities=13%  Similarity=0.201  Sum_probs=25.3

Q ss_pred             CCCcccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        152 SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       152 ~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      ..+ +|+|+.|.||+++++..+.|+||+.+.
T Consensus       222 ~~l-~HgDl~~~Nil~~~~~~~~vIDwe~a~  251 (357)
T 3ats_A          222 PVL-LWGDARVGNVLYRDFQPVAVLDWEMVA  251 (357)
T ss_dssp             CEE-ECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred             ceE-EeCCCCCCeEEEeCCcEEEEEcccccc
Confidence            345 999999999999976668999999864

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=90.68  E-value=0.11  Score=47.01  Aligned_cols=30  Identities=20%  Similarity=0.382  Sum_probs=24.3

Q ss_pred             CCcccCCCCCCCeEEcC----CeEEEEeccccccc
Q psy16840        153 PIGCHGNLKSSNCVVTS----RWVLQVTDFGLHEL  183 (413)
Q Consensus       153 ~iiiHrdlkp~Nill~~----~~~~kl~Dfg~a~~  183 (413)
                      .+ +|+|++|.||+++.    ...+.|+||+.+..
T Consensus       191 ~~-~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          191 RL-IHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             EE-ECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             ee-EeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            45 99999999999997    34458999998643

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=89.63  E-value=0.12  Score=47.21  Aligned_cols=31  Identities=19%  Similarity=0.206  Sum_probs=25.8

Q ss_pred             CCCcccCCCCCCCeEEcCC----eEEEEeccccccc
Q psy16840        152 SPIGCHGNLKSSNCVVTSR----WVLQVTDFGLHEL  183 (413)
Q Consensus       152 ~~iiiHrdlkp~Nill~~~----~~~kl~Dfg~a~~  183 (413)
                      ..+ +|||+.+.||+++.+    +.+.|.||+.+..
T Consensus       183 ~~l-vHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          183 MVF-VHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CEE-ECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             Cee-EeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            345 999999999999874    6789999998643

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=87.54  E-value=0.2  Score=45.51  Aligned_cols=27  Identities=15%  Similarity=0.083  Sum_probs=23.3

Q ss_pred             CCcccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       153 ~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      .+ +|+|+++.||+++ + .+.|+||+.+.
T Consensus       196 ~l-~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          196 LR-LHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             EE-CCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             ee-eeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            45 8999999999999 4 78999998764

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=86.70  E-value=0.26  Score=45.77  Aligned_cols=28  Identities=29%  Similarity=0.610  Sum_probs=22.9

Q ss_pred             CCcccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       153 ~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      .+ +|+|+.+.|||++.+. +.|+||..+.
T Consensus       213 ~l-~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          213 VF-CHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             EE-ECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             EE-EeCCCCcccEEecCCc-EEEEEecCCC
Confidence            35 9999999999998664 7899998753

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=86.57  E-value=0.23  Score=45.68  Aligned_cols=30  Identities=20%  Similarity=0.446  Sum_probs=26.0

Q ss_pred             CCcccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       153 ~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      .+ +|+|+.+.||+++.++.+.|.||+.+..
T Consensus       207 ~~-~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          207 VL-CHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             EE-ECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ee-EeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            45 9999999999999878899999987643

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=86.18  E-value=0.3  Score=45.84  Aligned_cols=29  Identities=17%  Similarity=0.279  Sum_probs=23.9

Q ss_pred             CCCcccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        152 SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       152 ~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      ..+ +|||+.|.||+++.+ .+++.||..+.
T Consensus       227 ~~L-~HGDl~~~Nil~~~~-~~~lID~e~a~  255 (397)
T 2olc_A          227 ETL-IHGDLHTGSIFASEH-ETKVIDPEFAF  255 (397)
T ss_dssp             CEE-ECSCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             Cce-eeCCCCcCcEEEeCC-CeEEEeCcccc
Confidence            445 999999999999876 48899998753

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=83.71  E-value=0.4  Score=43.05  Aligned_cols=27  Identities=15%  Similarity=0.283  Sum_probs=22.4

Q ss_pred             cccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        155 GCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       155 iiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      ++|+|+.|.||+ ..++.+.++||..+.
T Consensus       175 l~HgDl~~~Nil-~~~~~~~lID~e~a~  201 (301)
T 3dxq_A          175 ACHCDPLCENFL-DTGERMWIVDWEYSG  201 (301)
T ss_dssp             EECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             eeccCCCcCCEE-ECCCCEEEEeccccc
Confidence            499999999999 455677999998754

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=83.70  E-value=0.33  Score=46.17  Aligned_cols=16  Identities=25%  Similarity=0.561  Sum_probs=13.9

Q ss_pred             cccCCCCCCCeEEcCC
Q psy16840        155 GCHGNLKSSNCVVTSR  170 (413)
Q Consensus       155 iiHrdlkp~Nill~~~  170 (413)
                      ++|+|+.+.|||++.+
T Consensus       251 ~~H~Dl~~gNiL~~~~  266 (429)
T 1nw1_A          251 FCHNDLQEGNILLPKA  266 (429)
T ss_dssp             EECSCCCGGGEEEEC-
T ss_pred             EEeCCCCCCeEEeeCC
Confidence            3999999999999875

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=82.99  E-value=0.48  Score=45.47  Aligned_cols=15  Identities=47%  Similarity=0.640  Sum_probs=13.5

Q ss_pred             CcccCCCCCCCeEEc
Q psy16840        154 IGCHGNLKSSNCVVT  168 (413)
Q Consensus       154 iiiHrdlkp~Nill~  168 (413)
                      .++|+|+.+.|||++
T Consensus       291 v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          291 VLCHCDLLSSNIINT  305 (458)
T ss_dssp             EEECSCCCGGGEEEC
T ss_pred             eEEecCCCCCcEEee
Confidence            349999999999998

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=82.25  E-value=0.54  Score=43.86  Aligned_cols=28  Identities=25%  Similarity=0.440  Sum_probs=24.4

Q ss_pred             cccCCCCCCCeEEcCC----eEEEEecccccc
Q psy16840        155 GCHGNLKSSNCVVTSR----WVLQVTDFGLHE  182 (413)
Q Consensus       155 iiHrdlkp~Nill~~~----~~~kl~Dfg~a~  182 (413)
                      ++|+|+.+.||+++.+    +.+.|+||..+.
T Consensus       222 ~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          222 FCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             EECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             EEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            4999999999999876    688999998753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	413
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-24
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-20
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-19
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-19
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-19
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	9e-19
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-18
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-18
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-18
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-18
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-18
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-17
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-17
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-17
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-17
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-16
d1azsb_	199	d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {	3e-16
d1azsb_	199	d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {	7e-06
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	4e-16
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-16
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-16
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-16
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-15
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-15
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-14
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-14
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	7e-14
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	9e-14
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-13
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-13
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-13
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-13
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-13
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-13
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	7e-13
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-12
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-12
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-12
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-11
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-10
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-10
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-10
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-10
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	8e-10
d1azsa_	190	d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {D	8e-10
d1azsa_	190	d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {D	4e-05
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-09
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	7e-09
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-08
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-08
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-08
d1wc1a_	197	d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina p	4e-08
d1wc1a_	197	d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina p	0.001
d1fx2a_	235	d.58.29.1 (A:) Receptor-type monomeric adenylyl cy	4e-08
d1fx2a_	235	d.58.29.1 (A:) Receptor-type monomeric adenylyl cy	7e-04
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-08
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	8e-08
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-07
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-07
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-07
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-07
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-07
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	5e-07
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-06
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-06
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	8e-06
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-04
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-04

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 1e-24
 Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 4/160 (2%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           QGM +LH   I  H +LKS+N  +     +++ DFGL  ++           Q   S+LW
Sbjct: 115 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF-EQLSGSILW 172

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR-PNL 262
            APE++R        + ++DVYAF ++L+E++  + P+      +         +  P+L
Sbjct: 173 MAPEVIR-MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 231

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
             +R +C   +   M +C  +  + RP FP I A ++ + 
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLA 271

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.7 bits (219), Expect = 2e-20
 Identities = 47/193 (24%), Positives = 73/193 (37%), Gaps = 29/193 (15%)

Query: 144 QGMTFLHRSPIGC-------HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEH 195
            G+  LH   +G        H +LKS N +V       + D GL      A +   I  +
Sbjct: 111 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPN 170

Query: 196 QYYRSLLWKAPELLRDTHAPIRG--TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED 253
               +  + APE+L D+         ++AD+YA  ++  EI  R    G    Y+    D
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230

Query: 254 ---------------CEEPFRPNLELLRDSCE--PFVLACMRDCWAEAPESRPDFPTIRA 296
                          CE+  RPN+     SCE    +   MR+CW     +R     I+ 
Sbjct: 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290

Query: 297 RLKHMKDGKQKNI 309
            L  +   +Q+ I
Sbjct: 291 TLSQLS--QQEGI 301

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.1 bits (210), Expect = 2e-19
 Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 20/162 (12%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           + M +L  +    H +L + N +V+   V +V+DFG        +  S  +      + W
Sbjct: 114 EAMEYLEGNNF-VHRDLAARNVLVSEDNVAKVSDFG------LTKEASSTQDTGKLPVKW 166

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYE--PKGEDCEEPFRP 260
            APE LR+       + K+DV++F ++L EI    R P+    L +  P+ E   +   P
Sbjct: 167 TAPEALREKKF----STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 222

Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
                 D C P V   M++CW      RP F  +R +L+H+K
Sbjct: 223 ------DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 258

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.6 bits (211), Expect = 2e-19
 Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 12/184 (6%)

Query: 141 IPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR- 199
              +GM FL       H +L + NC++  ++ ++V DFGL    +  E DS+      + 
Sbjct: 138 QVAKGMKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 196

Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR 259
            + W A E L+      + T K+DV++F V+L E++ R  P               +  R
Sbjct: 197 PVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 252

Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEK 319
               L  + C   +   M  CW    E RP F  + +R+  +       I +  + +   
Sbjct: 253 L---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI---FSTFIGEHYVHVNAT 306

Query: 320 QKNI 323
             N+
Sbjct: 307 YVNV 310

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.7 bits (209), Expect = 3e-19
 Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 10/158 (6%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM F+       H +L+++N +V+     ++ DFGL   R   +N+          + W
Sbjct: 120 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLA--RLIEDNEYTAREGAKFPIKW 176

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
            APE +         T K+DV++F ++L EI+                ++ E  +R    
Sbjct: 177 TAPEAINYGT----FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM--- 229

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
           +  D+C   +   MR CW E PE RP F  +R+ L+  
Sbjct: 230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 9e-19
 Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 10/160 (6%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +L  + +  H +L + NC+V    V++V+DFG+   R   ++           + W
Sbjct: 112 EGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMT--RFVLDDQYTSSTGTKFPVKW 168

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
            +PE+   +      + K+DV++F V++ E+                 ED    FR    
Sbjct: 169 ASPEVFSFSRY----SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP 224

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
                    V   M  CW E PE RP F  +  +L  + +
Sbjct: 225 ---RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.7 bits (206), Expect = 2e-18
 Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 10/159 (6%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM FL       H +L + N +VT   V+++ DFGL        N  +        + W
Sbjct: 175 KGMEFLEFKSC-VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVV-RGNARLPVKW 232

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L +       T K+DV+++ ++L EI      P+ G  +     +  +  F+ + 
Sbjct: 233 MAPESLFEGIY----TIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQ 288

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                     +   M+ CWA     RP FP + + L   
Sbjct: 289 P---FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 324

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.8 bits (204), Expect = 2e-18
 Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 10/156 (6%)

Query: 146 MTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA 205
           M ++ R     H +L+++N +V    V +V DFGL   R   +N+          + W A
Sbjct: 126 MAYVERMNY-VHRDLRAANILVGENLVCKVADFGLA--RLIEDNEYTARQGAKFPIKWTA 182

Query: 206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELL 265
           PE           T K+DV++F ++L E+  +        +     +  E  +R      
Sbjct: 183 PEAALYGRF----TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP---C 235

Query: 266 RDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
              C   +   M  CW + PE RP F  ++A L+  
Sbjct: 236 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 271

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 82.2 bits (202), Expect = 4e-18
 Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 11/159 (6%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            GM +L       H +L + NC+V    V+++ DFGL    + A+     +      + W
Sbjct: 151 AGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA-DGNDAIPIRW 208

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYEPKGEDCEEPFRPNL 262
             PE +         T ++DV+A+ V+L EI      P+ G        E        N+
Sbjct: 209 MPPESIFYNRY----TTESDVWAYGVVLWEIFSYGLQPYYG----MAHEEVIYYVRDGNI 260

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
               ++C   +   MR CW++ P  RP F +I   L+ M
Sbjct: 261 LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 299

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 5e-18
 Identities = 33/158 (20%), Positives = 57/158 (36%), Gaps = 8/158 (5%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            GM +L       H +L + N +V S  V +V+DFGL  +       +         + W
Sbjct: 121 AGMKYLANMNY-VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW 179

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
            APE +            +DV++F +++ E++                +   + FR    
Sbjct: 180 TAPEAISYRKFT----SASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP 235

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                C   +   M  CW +    RP F  I + L  +
Sbjct: 236 ---MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 270

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.3 bits (200), Expect = 6e-18
 Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 10/159 (6%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            GM +L       H +L + N ++ +R   +++DFGL +     ++           L W
Sbjct: 120 MGMKYLEEKNF-VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKW 178

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE +         + ++DV+++ V + E +   + P+      E      +       
Sbjct: 179 YAPECINFRKF----SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME-- 232

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                 C P + A M DCW    E RPDF T+  R++  
Sbjct: 233 --CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 269

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 80.8 bits (199), Expect = 1e-17
 Identities = 31/186 (16%), Positives = 71/186 (38%), Gaps = 17/186 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           QG+ +LH   +  H ++K+ N +++   ++++ DFG   +   A       + +  +  W
Sbjct: 126 QGLAYLHSHNM-IHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-------NSFVGTPYW 177

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
            APE++       +   K DV++  +   E+  R+ P              +        
Sbjct: 178 MAPEVIL-AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA--- 233

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH--MKDGKQKNIIDQMMEMMEKQK 321
           L       +    +  C  + P+ RP    +   LKH  +   +   +I  +++  +   
Sbjct: 234 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVL---LKHRFVLRERPPTVIMDLIQRTKDAV 290

Query: 322 NIIDQM 327
             +D +
Sbjct: 291 RELDNL 296

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 2e-17
 Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 20/178 (11%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +L +     H +L + N +V   +V ++ DFGL   +      ++G       + W
Sbjct: 138 RGMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG----RLPVRW 192

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
            A E L  +      T  +DV+++ V+L EI+   G           G  C E +    +
Sbjct: 193 MAIESLNYSV----YTTNSDVWSYGVLLWEIVSLGGTP-------YCGMTCAELYEKLPQ 241

Query: 264 LLR----DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMM 317
             R     +C+  V   MR CW E P  RP F  I   L  M + ++  +   + E  
Sbjct: 242 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYEKF 299

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 2e-17
 Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 10/159 (6%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            GM +L  S    H +L + N ++ ++   +++DFGL +     EN    +      + W
Sbjct: 118 MGMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 176

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE +         + K+DV++F V++ E     + P+ G    E      +       
Sbjct: 177 YAPECINYYKF----SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG-- 230

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                 C   +   M  CW    E+RP F  +  RL++ 
Sbjct: 231 --CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 267

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 78.6 bits (193), Expect = 5e-17
 Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 12/174 (6%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
             M +L +     H +L + NC+V    +++V DFGL  L       +    ++   + W
Sbjct: 126 SAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKW 182

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
            APE L         + K+DV+AF V+L EI                 E  E+ +R    
Sbjct: 183 TAPESLAYNKF----SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 238

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMM 317
              + C   V   MR CW   P  RP F  I    + M   ++ +I D++ + +
Sbjct: 239 ---EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF--QESSISDEVEKEL 287

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 3e-16
 Identities = 29/161 (18%), Positives = 59/161 (36%), Gaps = 18/161 (11%)

Query: 144 QGMTFLHRSPIG----CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR 199
             +   HR   G     H +LK +N  +  +  +++ DFGL  +     +D+     +  
Sbjct: 120 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI---LNHDTSFAKAFVG 176

Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR 259
           +  + +PE +          +K+D+++   +L+E+     PF      E  G+  E  FR
Sbjct: 177 TPYYMSPEQMNRMSY----NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR 232

Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
                +       +   +          RP    I   L++
Sbjct: 233 R----IPYRYSDELNEIITRMLNLKDYHRPSVEEI---LEN 266

>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase IIC1, domain C2a
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 74.6 bits (182), Expect = 3e-16
 Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLT 60
            P+Y ++G+TVN ASRM+STG   +I ++      L  L GY    RG++ +KGKG++ T
Sbjct: 136 KPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTL-GYTCTCRGIINVKGKGDLKT 194

Query: 61  YWL 63
           Y++
Sbjct: 195 YFV 197

>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase IIC1, domain C2a
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.5 bits (104), Expect = 7e-06
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 381 ESYDLVTIYFSDIVGFTAMSAESTPLERP 409
           +SYD V + F+ I  F     ES   +  
Sbjct: 2   QSYDCVCVMFASIPDFKEFYTESDVNKEG 30

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.9 bits (186), Expect = 4e-16
 Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 9/160 (5%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +L       H +L + N ++ +R ++++ DFGL       ++  + +        W
Sbjct: 122 EGMGYLESKRF-IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE L+        +  +D + F V L E+    + P+ G    +   +  +E  R   
Sbjct: 181 CAPESLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
               + C   +   M  CWA  PE RP F  +R  L   +
Sbjct: 237 P---EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.9 bits (186), Expect = 4e-16
 Identities = 35/161 (21%), Positives = 60/161 (37%), Gaps = 12/161 (7%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI--GEHQYYRSL 201
            GM +L       H +L + N +V S  V +V+DFGL        +D            +
Sbjct: 139 AGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 197

Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRP 260
            W APE ++           +DV+++ +++ E++     P+      +      ++   P
Sbjct: 198 RWTAPEAIQYRKFT----SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP 253

Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                   C   +   M DCW +    RP F  I   L  M
Sbjct: 254 ----PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 290

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.0 bits (184), Expect = 6e-16
 Identities = 27/157 (17%), Positives = 52/157 (33%), Gaps = 18/157 (11%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
             +++ H   +  H ++K  N ++ S   L++ DFG           S        +L +
Sbjct: 117 NALSYCHSKRV-IHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTTLCGTLDY 170

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
             PE++          +K D+++  V+ +E +  + PF      E         F     
Sbjct: 171 LPPEMIEGRMH----DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---- 222

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
              D         +       P  RP    +   L+H
Sbjct: 223 -FPDFVTEGARDLISRLLKHNPSQRPMLREV---LEH 255

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.4 bits (185), Expect = 6e-16
 Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 12/175 (6%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
             + +LH + I  H +LK+ N + T    +++ DFG+                +  +  W
Sbjct: 121 DALNYLHDNKI-IHRDLKAGNILFTLDGDIKLADFGVSAK---NTRTIQRRDSFIGTPYW 176

Query: 204 KAPELLRDTHAPIRG-TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE++    +  R    KADV++  + L E+     P           +  +    P  
Sbjct: 177 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE--PPT 234

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH--MKDGKQKNIIDQMME 315
                         ++ C  +  ++R     +   L+H  +     K I + + E
Sbjct: 235 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL---LQHPFVTVDSNKPIRELIAE 286

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.6 bits (180), Expect = 2e-15
 Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 19/163 (11%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           + M +L       H +L + NC+V  + V++V+DFGL   R+  +++          + W
Sbjct: 111 EAMEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFGLS--RYVLDDEYTSSVGSKFPVRW 167

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYE--PKGEDCEEPFRP 260
             PE+L  +      + K+D++AF V++ EI    + P+      E           +RP
Sbjct: 168 SPPEVLMYSKF----SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP 223

Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
           +L          V   M  CW E  + RP F  +   L ++ D
Sbjct: 224 HL------ASEKVYTIMYSCWHEKADERPTFKIL---LSNILD 257

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.1 bits (179), Expect = 3e-15
 Identities = 32/159 (20%), Positives = 56/159 (35%), Gaps = 17/159 (10%)

Query: 144 QGMTFLH-RSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSL 201
           +G+ FLH R+P   H +LK  N  +T     +++ D GL          +        + 
Sbjct: 123 KGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL-----ATLKRASFAKAVIGTP 177

Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPN 261
            + APE+  + +      +  DVYAF + + E+     P+  C              +P 
Sbjct: 178 EFMAPEMYEEKY-----DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP- 231

Query: 262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
                    P V   +  C  +  + R     +   L H
Sbjct: 232 -ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL---LNH 266

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.0 bits (176), Expect = 1e-14
 Identities = 37/188 (19%), Positives = 72/188 (38%), Gaps = 19/188 (10%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEHQYYRSLL 202
           +G+T+L       H ++K SN +V SR  +++ DFG+  +L     N  +G   Y     
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM---- 170

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
             +PE L+ TH     + ++D+++  + L E+   R P        P  ++ E  F   +
Sbjct: 171 --SPERLQGTHY----SVQSDIWSMGLSLVEMAVGRYPIPP-----PDAKELELMFGCQV 219

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKN 322
           E       P      R   +   +SRP           + +   K             ++
Sbjct: 220 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEF---QD 276

Query: 323 IIDQMMEM 330
            +++ +  
Sbjct: 277 FVNKCLIK 284

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 2e-14
 Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 9/174 (5%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +L    +  H +L + N +V +   +++TDFGL +L    E +   E      + W
Sbjct: 122 KGMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 179

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
            A E +         T ++DV+++ V + E++                   E+  R    
Sbjct: 180 MALESILHRIY----THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 235

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMM 317
                C   V   M  CW    +SRP F  +      M    Q+ ++ Q  E M
Sbjct: 236 ---PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERM 286

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 7e-14
 Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 13/203 (6%)

Query: 100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGN 159
           NL   +++ +    P +     +  + D + + +L+ +   + + GM FL       H +
Sbjct: 104 NLSTYLRSKRNEFVPYKVAPEDL--YKDFLTLEHLICYSFQVAK-GMEFLASRKC-IHRD 159

Query: 160 LKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGT 219
           L + N +++ + V+++ DFGL       + D + +      L W APE + D       T
Sbjct: 160 LAARNILLSEKNVVKICDFGLARD-IYKDPDYVRKGDARLPLKWMAPETIFDRVY----T 214

Query: 220 QKADVYAFAVILHEII-GRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMR 278
            ++DV++F V+L EI      P+ G  + E      +E  R       D   P +   M 
Sbjct: 215 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTML 271

Query: 279 DCWAEAPESRPDFPTIRARLKHM 301
           DCW   P  RP F  +   L ++
Sbjct: 272 DCWHGEPSQRPTFSELVEHLGNL 294

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 69.1 bits (168), Expect = 9e-14
 Identities = 19/171 (11%), Positives = 51/171 (29%), Gaps = 17/171 (9%)

Query: 143 RQGMTFLHRSPIGCHGNLKSSNCVVTSRWV-----LQVTDFGLHELRHCAENDSIGEHQY 197
              +  +H   +  + ++K  N ++          + V DFG+ +            ++ 
Sbjct: 111 LARVQSIHEKSL-VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYRE 169

Query: 198 YRSLL----WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGC---GLYEPK 250
            ++L     + +             +++ D+ A   +    +    P+ G       +  
Sbjct: 170 KKNLSGTARYMSINTHLGREQ----SRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKY 225

Query: 251 GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
               E+     L  L           M      A ++ PD+  ++     +
Sbjct: 226 ERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 276

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.5 bits (167), Expect = 1e-13
 Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 12/158 (7%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            G+ +LH   I  H ++K  N ++  R  L+++DFGL  +     N     ++   +L +
Sbjct: 114 AGVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFR-YNNRERLLNKMCGTLPY 171

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYEPKGEDCEEPFRPNL 262
            APELL+         +  DV++  ++L  ++ G           +   +  E+    N 
Sbjct: 172 VAPELLKRRE---FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN- 227

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
                  +   LA +     E P +R   P I    K 
Sbjct: 228 --PWKKIDSAPLALLHKILVENPSARITIPDI---KKD 260

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 2e-13
 Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 12/161 (7%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
             + +L       H ++ + N +V+S   +++ DFGL   R+  ++      +    + W
Sbjct: 119 TALAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKW 175

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYEPKGEDCEEPFRPNL 262
            APE +            +DV+ F V + EI+     PF G    +  G        P  
Sbjct: 176 MAPESINFRRFT----SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-- 229

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
             +  +C P + + M  CWA  P  RP F  ++A+L  + +
Sbjct: 230 --MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.3 bits (166), Expect = 2e-13
 Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 11/161 (6%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            GM +L+ +    H +L + NC+V   + +++ DFG+    +  +    G  +    + W
Sbjct: 144 DGMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG-GKGLLPVRW 201

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYEPKGEDCEEPFRPNL 262
            +PE L+D       T  +DV++F V+L EI      P+ G        +         L
Sbjct: 202 MSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQG----LSNEQVLRFVMEGGL 253

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
               D+C   +   MR CW   P+ RP F  I + +K   +
Sbjct: 254 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.1 bits (166), Expect = 2e-13
 Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 13/157 (8%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           Q + FLH + +  H ++KS N ++     +++TDFG        ++          +  W
Sbjct: 127 QALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPYW 182

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
            APE++           K D+++  ++  E+I    P+                  P L+
Sbjct: 183 MAPEVVTRKAY----GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG-TPELQ 237

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
              +         +  C     E R     +   L+H
Sbjct: 238 -NPEKLSAIFRDFLNRCLDMDVEKRGSAKEL---LQH 270

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 3e-13
 Identities = 37/203 (18%), Positives = 78/203 (38%), Gaps = 11/203 (5%)

Query: 100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGN 159
           +LL+ ++  + +    +T    +      + +  L++F   + + GM FL       H +
Sbjct: 113 DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK-GMAFLASKNC-IHRD 170

Query: 160 LKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGT 219
           L + N ++T   + ++ DFGL        N  +  +     + W APE + +       T
Sbjct: 171 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL-PVKWMAPESIFNCV----YT 225

Query: 220 QKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-DSCEPFVLACMR 278
            ++DV+++ + L E+              P      +  +    +L  +     +   M+
Sbjct: 226 FESDVWSYGIFLWELFSLGSS---PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 282

Query: 279 DCWAEAPESRPDFPTIRARLKHM 301
            CW   P  RP F  I   ++  
Sbjct: 283 TCWDADPLKRPTFKQIVQLIEKQ 305

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 67.0 bits (163), Expect = 4e-13
 Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 11/159 (6%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           + +  LH+  I  H +LK  N ++     +++TDFG      C  +      +   +  +
Sbjct: 121 EVICALHKLNI-VHRDLKPENILLDDDMNIKLTDFGFS----CQLDPGEKLREVCGTPSY 175

Query: 204 KAPELLRDTHAPIRG--TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPN 261
            APE++  +         ++ D+++  VI++ ++    PF                ++  
Sbjct: 176 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 235

Query: 262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
                D     V   +       P+ R         L H
Sbjct: 236 SPEW-DDYSDTVKDLVSRFLVVQPQKRYTAEEA---LAH 270

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 7e-13
 Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 15/161 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +GM +L       H +L + N +VT   V+++ DFGL    H  +            + W
Sbjct: 146 RGMEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-TNGRLPVKW 203

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYE--PKGEDCEEPFRP 260
            APE L D       T ++DV++F V+L EI      P+ G  + E     ++     +P
Sbjct: 204 MAPEALFDRIY----THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 259

Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
                  +C   +   MRDCW   P  RP F  +   L  +
Sbjct: 260 ------SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 65.6 bits (159), Expect = 1e-12
 Identities = 21/168 (12%), Positives = 58/168 (34%), Gaps = 15/168 (8%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCAENDSIGEHQYYRS 200
             + ++H      H ++K  N ++       ++ + DFGL +    A       ++  ++
Sbjct: 114 SRIEYIHSKNF-IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKN 172

Query: 201 LL----WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG---ED 253
           L     + +             +++ D+ +   +L        P+ G      +      
Sbjct: 173 LTGTARYASINTHLGIEQ----SRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 228

Query: 254 CEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
            E+     +E+L           +  C +   + +PD+  +R   +++
Sbjct: 229 SEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 65.5 bits (159), Expect = 2e-12
 Identities = 37/224 (16%), Positives = 71/224 (31%), Gaps = 19/224 (8%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRW--VLQVTDFGLHELRHCAENDSIGEHQYYRSL 201
           +G+  +H +    H +LK  N + T++    L++ DFGL        +          + 
Sbjct: 135 KGLCHMHENNY-VHLDLKPENIMFTTKRSNELKLIDFGLT----AHLDPKQSVKVTTGTA 189

Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPN 261
            + APE+              D+++  V+ + ++    PFGG    E         +  +
Sbjct: 190 EFAAPEVAEGKPV----GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 245

Query: 262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH--MKDGKQKNIIDQMMEMMEK 319
                          +R      P +R    TI   L+H  +  G       Q+     +
Sbjct: 246 DSAF-SGISEDGKDFIRKLLLADPNTR---MTIHQALEHPWLTPGNAPGRDSQIPS--SR 299

Query: 320 QKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRM 363
              I D +    + +   L  L          + R  E  +   
Sbjct: 300 YTKIRDSIKTKYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDA 343

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 63.6 bits (154), Expect = 5e-12
 Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 7/162 (4%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           Q + F H++ I  H ++K +N ++++   ++V DFG+      + N          +  +
Sbjct: 122 QALNFSHQNGI-IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 180

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
            +PE  R          ++DVY+   +L+E++    PF G        +   E   P   
Sbjct: 181 LSPEQARGDSV----DARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 236

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPT-IRARLKHMKDG 304
              +     + A +    A+ PE+R      +RA L  + +G
Sbjct: 237 -RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 277

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 2e-11
 Identities = 33/215 (15%), Positives = 76/215 (35%), Gaps = 25/215 (11%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRS 200
           + + +LH   I  H ++K  N + TS+    +L++TDFG    +    ++S+       +
Sbjct: 122 EAIQYLHSINI-AHRDVKPENLLYTSKRPNAILKLTDFGFA--KETTSHNSL--TTPCYT 176

Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRP 260
             + APE+L          +  D+++  VI++ ++    PF                   
Sbjct: 177 PYYVAPEVLGPEKY----DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 232

Query: 261 NLEL---LRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH--MKDGKQK-----NII 310
             E            V   +R+     P  R         + H  +    +      +  
Sbjct: 233 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF---MNHPWIMQSTKVPQTPLHTS 289

Query: 311 DQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQR 345
             + E  E+ +++ ++M   +     + E +  ++
Sbjct: 290 RVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKK 324

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.0 bits (150), Expect = 2e-11
 Identities = 26/146 (17%), Positives = 56/146 (38%), Gaps = 11/146 (7%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
             + +LH   I  H +LK  N ++     +Q+TDFG  ++    E+     + +  +  +
Sbjct: 119 SALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANSFVGTAQY 176

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
            +PELL +  A     + +D++A   I+++++    PF     Y    +  +  +     
Sbjct: 177 VSPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-- 230

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRP 289
              +   P     +          R 
Sbjct: 231 ---EKFFPKARDLVEKLLVLDATKRL 253

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 1e-10
 Identities = 22/159 (13%), Positives = 58/159 (36%), Gaps = 15/159 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSR--WVLQVTDFGLHELRHCAENDSIGEHQYYRSL 201
           + + FLH   I  H +++  N +  +R    +++ +FG        +N        + + 
Sbjct: 113 EALQFLHSHNI-GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF----RLLFTAP 167

Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPN 261
            + APE+ +        +   D+++   +++ ++    PF      +         +  +
Sbjct: 168 EYYAPEVHQHDVV----STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD 223

Query: 262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
            E  ++      +  +     +  +SR    T    L+H
Sbjct: 224 EEAFKE-ISIEAMDFVDRLLVKERKSR---MTASEALQH 258

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.6 bits (141), Expect = 3e-10
 Identities = 24/157 (15%), Positives = 48/157 (30%), Gaps = 18/157 (11%)

Query: 146 MTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA 205
           + +LH   I  + +LK  N ++     +++TDFG  +          G   Y       A
Sbjct: 117 LEYLHSKDI-IYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDY------IA 169

Query: 206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELL 265
           PE++          +  D ++F ++++E++    PF      +   +      R      
Sbjct: 170 PEVVSTKPY----NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELR-----F 220

Query: 266 RDSCEPFVLACMRDCWAEAPESRPDF--PTIRARLKH 300
                  V   +          R             H
Sbjct: 221 PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 257

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 58.9 bits (142), Expect = 3e-10
 Identities = 27/159 (16%), Positives = 60/159 (37%), Gaps = 15/159 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSR--WVLQVTDFGLHELRHCAENDSIGEHQYYRSL 201
           +G+  +H   I  H ++K  N +  ++    +++ DFGL        ++ +       + 
Sbjct: 138 EGLKHMHEHSI-VHLDIKPENIMCETKKASSVKIIDFGL--ATKLNPDEIV--KVTTATA 192

Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPN 261
            + APE++             D++A  V+ + ++    PF G    E         +  +
Sbjct: 193 EFAAPEIVDREPV----GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 248

Query: 262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
            +    S  P     +++   + P  R    T+   L+H
Sbjct: 249 EDAF-SSVSPEAKDFIKNLLQKEPRKR---LTVHDALEH 283

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.2 bits (140), Expect = 5e-10
 Identities = 27/159 (16%), Positives = 57/159 (35%), Gaps = 13/159 (8%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            G+  +H   +  + +LK +N ++     ++++D GL       +      H    +  +
Sbjct: 118 LGLEHMHNRFV-VYRDLKPANILLDEHGHVRISDLGL-----ACDFSKKKPHASVGTHGY 171

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
            APE+L+   A       AD ++   +L +++    PF      +   E         +E
Sbjct: 172 MAPEVLQKGVAY---DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMAVE 227

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR--LKH 300
            L DS  P + + +          R       A+   + 
Sbjct: 228 -LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 265

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 8e-10
 Identities = 24/159 (15%), Positives = 63/159 (39%), Gaps = 8/159 (5%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
             +  LH+  I  + ++K  N ++ S   + +TDFGL   +    +++   + +  ++ +
Sbjct: 140 LALEHLHKLGI-IYRDIKLENILLDSNGHVVLTDFGLS--KEFVADETERAYDFCGTIEY 196

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
            AP+++R   +     +  D ++  V+++E++    PF   G    + E      +    
Sbjct: 197 MAPDIVRGGDSGH--DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP 254

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRP--DFPTIRARLKH 300
             ++         ++    + P+ R            +H
Sbjct: 255 YPQE-MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292

>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis familiaris) [TaxId: 9615]} Length = 190

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase VC1, domain C1a
species: Dog (Canis familiaris) [TaxId: 9615]

 Score = 55.7 bits (133), Expect = 8e-10
 Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGE-VL 59
             ++ ++ + V  A+ ME+ G+  RIHI+ A  + L+          G      K   + 
Sbjct: 126 KWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLNGDYEVEPGCGGERNAYLKEHSIE 185

Query: 60  TYWLV 64
           T+ ++
Sbjct: 186 TFLIL 190

>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis familiaris) [TaxId: 9615]} Length = 190

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase VC1, domain C1a
species: Dog (Canis familiaris) [TaxId: 9615]

 Score = 41.8 bits (97), Expect = 4e-05
 Identities = 11/27 (40%), Positives = 20/27 (74%)

Query: 381 ESYDLVTIYFSDIVGFTAMSAESTPLE 407
           + +D V+I F+DI GFT+++++ T  E
Sbjct: 10  QKHDNVSILFADIEGFTSLASQCTAQE 36

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (137), Expect = 1e-09
 Identities = 40/223 (17%), Positives = 94/223 (42%), Gaps = 15/223 (6%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +G+ ++H + +  H +LK SN ++ +   L++ DFGL  +     + +    +Y  +  +
Sbjct: 120 RGLKYIHSANV-LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 178

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
           +APE++ ++      T+  D+++   IL E++  R  F G    +           P+ E
Sbjct: 179 RAPEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 235

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPD-FPTIRARLKHM------KDGKQKNIIDQMMEM 316
            L           +     +        FP   ++   +       +  ++  ++Q +  
Sbjct: 236 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295

Query: 317 --MEKQKNIIDQ-MMEMMEKYANNLEDLVNQRTME-VYEEKRK 355
             +E+  +  D+ + E   K+   L+DL  ++  E ++EE  +
Sbjct: 296 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETAR 338

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (130), Expect = 7e-09
 Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 18/157 (11%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            G+ FLH   I  + +LK  N ++     +++ DFG+              + +  +  +
Sbjct: 114 LGLQFLHSKGI-VYRDLKLDNILLDKDGHIKIADFGM---CKENMLGDAKTNTFCGTPDY 169

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEP-KGEDCEEPFRPNL 262
            APE+L             D ++F V+L+E++  + PF G    E       + PF P  
Sbjct: 170 IAPEILLGQKY----NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP-- 223

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
                  E      +   +   PE R     +R  ++
Sbjct: 224 ----RWLEKEAKDLLVKLFVREPEKR---LGVRGDIR 253

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 2e-08
 Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 24/158 (15%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVT-SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           + +   H   +  H ++K  N ++  +R  L++ DFG   L            + Y    
Sbjct: 121 EAVRHCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYS--- 176

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
              PE +R         + A V++  ++L++++    PF             +E      
Sbjct: 177 --PPEWIRYHRYH---GRSAAVWSLGILLYDMVCGDIPFEH-----------DEEIIRGQ 220

Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
              R          +R C A  P  RP F  I     H
Sbjct: 221 VFFRQRVSSECQHLIRWCLALRPSDRPTFEEI---QNH 255

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.9 bits (126), Expect = 2e-08
 Identities = 24/159 (15%), Positives = 48/159 (30%), Gaps = 18/159 (11%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
               +LH   +  + +LK  N ++  +  +QVTDFG  +          G  +       
Sbjct: 152 LTFEYLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALA---- 206

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
             PE++          +  D +A  V+++E+     PF      +   +      R    
Sbjct: 207 --PEIILSKGY----NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP-- 258

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPD--FPTIRARLKH 300
                    +   +R+        R       +     H
Sbjct: 259 ---SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 3e-08
 Identities = 28/176 (15%), Positives = 65/176 (36%), Gaps = 17/176 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
             + +LH   +  + ++K  N ++     +++TDFGL        +D      +  +  +
Sbjct: 116 SALEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKTFCGTPEY 171

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
            APE+L D        +  D +   V+++E++  R PF              E  R    
Sbjct: 172 LAPEVLEDNDY----GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-- 225

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR--LKH--MKDGKQKNIIDQMME 315
               +  P   + +     + P+ R       A+  ++H        ++++ + + 
Sbjct: 226 ---RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLL 278

>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]} Length = 197

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylate cyclase CyaC
species: Spirulina platensis [TaxId: 118562]

 Score = 50.7 bits (120), Expect = 4e-08
 Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 4/64 (6%)

Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGE-VL 59
              +   G +VN A+R++    P  I +S         +    + +R  + +KG  E V+
Sbjct: 132 RSDFTAIGPSVNIAARLQEATAPNSIMVSAMVA---QYVPDEEIIKREFLELKGIDEPVM 188

Query: 60  TYWL 63
           T  +
Sbjct: 189 TCVI 192

>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]} Length = 197

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylate cyclase CyaC
species: Spirulina platensis [TaxId: 118562]

 Score = 37.6 bits (86), Expect = 0.001
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 378 VEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
           + PE   L+TI FSDIVGFT MS       
Sbjct: 1   LRPEP-RLITILFSDIVGFTRMSNALQSQG 29

>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase {Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]} Length = 235

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Receptor-type monomeric adenylyl cyclase
species: Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]

 Score = 51.5 bits (122), Expect = 4e-08
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 1   MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKL--GGYIVEERGVVCMKGKGE- 57
              Y  +G T N A+R ES     ++ ++ A   +L         V   G V ++G  + 
Sbjct: 151 TKGYDYYGRTPNMAARTESVANGGQVLMTHAAYMSLSAEDRKQIDVTALGDVALRGVSDP 210

Query: 58  VLTYWLVGA 66
           V  Y L   
Sbjct: 211 VKMYQLNTV 219

>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase {Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]} Length = 235

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Receptor-type monomeric adenylyl cyclase
species: Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]

 Score = 38.4 bits (88), Expect = 7e-04
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 378 VEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
              E  D VT+ F+DI   TA+   + P  
Sbjct: 5   APKEPTDPVTLIFTDIESSTALW-AAHPDL 33

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.2 bits (122), Expect = 7e-08
 Identities = 34/184 (18%), Positives = 65/184 (35%), Gaps = 20/184 (10%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCAENDSIGEHQYYRS 200
             + +LH   I  H +LK  N +  S      + ++DFGL ++    E+          +
Sbjct: 118 DAVKYLHDLGI-VHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGT 172

Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRP 260
             + APE+L         ++  D ++  VI + ++    PF      +   +  +  +  
Sbjct: 173 PGYVAPEVLAQKPY----SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF 228

Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH----MKDGKQKNIIDQMMEM 316
           +     D         +R    + PE R         L+H          KNI   + E 
Sbjct: 229 DSP-YWDDISDSAKDFIRHLMEKDPEKRFTCEQA---LQHPWIAGDTALDKNIHQSVSEQ 284

Query: 317 MEKQ 320
           ++K 
Sbjct: 285 IKKN 288

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 8e-08
 Identities = 29/173 (16%), Positives = 64/173 (36%), Gaps = 9/173 (5%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            G+ ++HR+ I  H ++K++N ++T   VL++ DFGL      A+N     +      LW
Sbjct: 128 NGLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLW 186

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
             P  L             D++    I+ E+  R     G           +       E
Sbjct: 187 YRPPELLLGERDY--GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 244

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEM 316
           +  +     +   +     +  + +           +++D    ++ID+++ +
Sbjct: 245 VWPNVDNYELYEKLELVKGQKRKVKDRLK------AYVRDPYALDLIDKLLVL 291

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 1e-07
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 7/127 (5%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           QG+ +LH+  I  H +LK +N ++    VL++ DFGL        + +        +  +
Sbjct: 111 QGLEYLHQHWI-LHRDLKPNNLLLDENGVLKLADFGLA---KSFGSPNRAYTHQVVTRWY 166

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
           +APELL             D++A   IL E++ R     G    +      E    P  E
Sbjct: 167 RAPELLFGAR---MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEE 223

Query: 264 LLRDSCE 270
              D C 
Sbjct: 224 QWPDMCS 230

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.3 bits (119), Expect = 1e-07
 Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 34/179 (18%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +G+ FLH   +  H +LK  N +VTS   +++ DFGL        +  +       +L +
Sbjct: 127 RGLDFLHSHRV-VHRDLKPQNILVTSSGQIKLADFGLA----RIYSFQMALTSVVVTLWY 181

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGC-----------GLYEPKGE 252
           +APE+L  +          D+++   I  E+  R+  F G             +  P  E
Sbjct: 182 RAPEVLLQSSY----ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 237

Query: 253 DCEE-----------PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
           D                   +E      +      +  C    P  R    +  + L H
Sbjct: 238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR---ISAYSALSH 293

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 49.9 bits (118), Expect = 2e-07
 Identities = 28/181 (15%), Positives = 56/181 (30%), Gaps = 34/181 (18%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            G+ + H   +  H +LK  N ++     L++ DFGL                   +L +
Sbjct: 111 NGIAYCHDRRV-LHRDLKPQNLLINREGELKIADFGL---ARAFGIPVRKYTHEIVTLWY 166

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGC-----------GLYEPKGE 252
           +AP++L  +    + +   D+++   I  E++     F G             L  P  +
Sbjct: 167 RAPDVLMGSK---KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK 223

Query: 253 DCEE-------------PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
           +                      E      +   +  +       P  R    T +  L+
Sbjct: 224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQR---ITAKQALE 280

Query: 300 H 300
           H
Sbjct: 281 H 281

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.9 bits (118), Expect = 2e-07
 Identities = 32/181 (17%), Positives = 58/181 (32%), Gaps = 34/181 (18%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           QG+ F H   +  H +LK  N ++ +   +++ DFGL                   +L +
Sbjct: 113 QGLAFCHSHRV-LHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEVVTLWY 168

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGC-----------GLYEPKGE 252
           +APE+L         +   D+++   I  E++ RR  F G             L  P   
Sbjct: 169 RAPEILLGCK---YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 225

Query: 253 DCEEPF-------------RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
                              R +   +    +    + +       P  R    + +A L 
Sbjct: 226 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKR---ISAKAALA 282

Query: 300 H 300
           H
Sbjct: 283 H 283

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 3e-07
 Identities = 33/161 (20%), Positives = 61/161 (37%), Gaps = 17/161 (10%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWV----LQVTDFGLHELRHCAENDSIGEHQYYR 199
            G+ +LH   I  H +LK  N ++  R V    +++ DFGL         +       + 
Sbjct: 124 NGVYYLHSLQI-AHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEF--KNIFG 178

Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR 259
           +  + APE++           +AD+++  VI + ++    PF G    E         + 
Sbjct: 179 TPEFVAPEIVNYEPL----GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234

Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
              E   +         +R    + P+ R    TI+  L+H
Sbjct: 235 FEDEYFSN-TSALAKDFIRRLLVKDPKKR---MTIQDSLQH 271

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 5e-07
 Identities = 40/223 (17%), Positives = 86/223 (38%), Gaps = 19/223 (8%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +G+ ++H +    H +LK  N  V     L++ DFGL           +    Y      
Sbjct: 132 KGLRYIH-AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYR----- 185

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
            APE++ +     R TQ  D+++   I+ E+I  +  F G    +   E  +    P  E
Sbjct: 186 -APEVILNWM---RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE 241

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNI 323
            ++          M+         + DF +I      +      N++++M+ +  +Q+  
Sbjct: 242 FVQRLQSDEAKNYMKGLP---ELEKKDFASILTNASPL----AVNLLEKMLVLDAEQRVT 294

Query: 324 IDQMMEM--MEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRML 364
             + +     E   +  ++   Q+  + +++  +T D   R+ 
Sbjct: 295 AGEALAHPYFESLHDTEDEPQVQKYDDSFDDVDRTLDEWKRVT 337

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 6e-07
 Identities = 37/224 (16%), Positives = 83/224 (37%), Gaps = 21/224 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +G+ ++H S    H +LK SN  V     L++ DFGL      A +       Y  +  +
Sbjct: 132 RGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGL------ARHTDDEMTGYVATRWY 184

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
           +APE++ +        Q  D+++   I+ E++  R  F         G D  +  +  L 
Sbjct: 185 RAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLF--------PGTDHIDQLKLILR 233

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ-KNIIDQMMEMMEKQKN 322
           L+       +     +      +S    P +      +       +++++M+ +   ++ 
Sbjct: 234 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 293

Query: 323 IIDQMMEM--MEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRML 364
              Q +      +Y +  ++ V     + +E +    D    + 
Sbjct: 294 TAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLT 337

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 1e-06
 Identities = 42/222 (18%), Positives = 71/222 (31%), Gaps = 38/222 (17%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           + + ++H   I CH ++K  N ++     VL++ DFG  +     E +      Y  S  
Sbjct: 133 RSLAYIHSFGI-CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN----VSYICSRY 187

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGC-----------GLYEPKG 251
           ++APEL+         T   DV++   +L E++  +  F G             L  P  
Sbjct: 188 YRAPELIFGAT---DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244

Query: 252 EDCEE-------------PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
           E   E                P  ++ R    P  +A         P +R    T     
Sbjct: 245 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR---LTPLEAC 301

Query: 299 KH--MKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNL 338
            H    + +  N+            N   Q +      A  L
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATIL 343

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 4e-06
 Identities = 23/172 (13%), Positives = 56/172 (32%), Gaps = 15/172 (8%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
           +G+ F H   +  H +LK  N ++     L++ +FGL   R           +       
Sbjct: 112 KGLGFCHSRNV-LHRDLKPQNLLINRNGELKLANFGL--ARAFGIPVRCYSAEVVTLWYR 168

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
               L          +   D+++   I  E+     P          G D ++  +    
Sbjct: 169 PPDVLFGAKLY----STSIDMWSAGCIFAELANAGRPL-------FPGNDVDDQLKRIFR 217

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMME 315
           LL    E    +  +    +     P   ++   +  + +   ++++  +++
Sbjct: 218 LLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKL-NATGRDLLQNLLK 268

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 8e-06
 Identities = 41/229 (17%), Positives = 88/229 (38%), Gaps = 17/229 (7%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            G+  LH + I  H +LK SN VV S   L++ DFGL          S     Y  +  +
Sbjct: 130 CGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLA----RTAGTSFMMTPYVVTRYY 184

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
           +APE++          +  D+++   I+ E++  +  F G    +   +  E+   P  E
Sbjct: 185 RAPEVILGMG----YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240

Query: 264 LLRDSCE---PFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ-KNIIDQMMEMMEK 319
            ++        +V    +      P+  PD         +     Q ++++ +M+ +   
Sbjct: 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 300

Query: 320 QKNIIDQMMEM----MEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRML 364
           ++  +D  ++     +      +E    Q   +  +E+  T +    ++
Sbjct: 301 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELI 349

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 40.6 bits (94), Expect = 2e-04
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 9/99 (9%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
           + + + H   I  H ++K  N ++      L++ D+GL E  H  +      +    S  
Sbjct: 140 KALDYCHSMGI-MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----NVRVASRY 194

Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
           +K PELL D           D+++   +L  +I R+ PF
Sbjct: 195 FKGPELLVDYQMY---DYSLDMWSLGCMLASMIFRKEPF 230

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.2 bits (90), Expect = 6e-04
 Identities = 24/190 (12%), Positives = 65/190 (34%), Gaps = 15/190 (7%)

Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
            G+ ++HR     H ++K  N ++      +            A           ++  +
Sbjct: 136 LGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREY 195

Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
           ++PE+L            AD+++ A ++ E+I     F        + ++     + +  
Sbjct: 196 RSPEVLLGAPW----GCGADIWSTACLIFELITGDFLF--------EPDEGHSYTKDDDH 243

Query: 264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNI 323
           + +      +L  +        +    F   R  L+++   K   + D + E  +  K+ 
Sbjct: 244 IAQIIE---LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE 300

Query: 324 IDQMMEMMEK 333
             ++ + +  
Sbjct: 301 AKEISDFLSP 310

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	413
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.98
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.98
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.98
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.98
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.98
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.97
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.97
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.97
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.97
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.97
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.97
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.97
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.97
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.97
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.97
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.97
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.97
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.97
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.97
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.97
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.97
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.97
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.96
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.96
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.96
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.95
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.95
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.95
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.94
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.93
d1azsb_	199	Adenylyl cyclase IIC1, domain C2a {Rat (Rattus nor	99.46
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.22
d1wc1a_	197	Adenylate cyclase CyaC {Spirulina platensis [TaxId	98.9
d1fx2a_	235	Receptor-type monomeric adenylyl cyclase {Trypanos	98.81
d1azsa_	190	Adenylyl cyclase VC1, domain C1a {Dog (Canis famil	98.78
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	92.98
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	92.09
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	91.46
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	87.25
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	84.89

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-38  Score=284.48  Aligned_cols=169  Identities=27%  Similarity=0.441  Sum_probs=126.0

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..+..++.  ||+  +||+|||++++ |||||||+|||++.++.+||+|||+|+....... ........||+.|+|||
T Consensus       103 ~~~~~~i~~--qi~--~gl~yLH~~~i-vHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~-~~~~~~~~gt~~y~APE  176 (276)
T d1uwha_         103 MIKLIDIAR--QTA--QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPE  176 (276)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEEETTSSEEECCCCCSCC-------------CCCCGGGCCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHhcCCE-eccccCHHHEEEcCCCCEEEccccceeeccccCC-cccccccccCcccCCHH
Confidence            333344444  666  99999999999 9999999999999999999999999987643222 12234567899999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-CCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      ++.+... ..++.++|||||||++|||+||+.||.+.+...... ........|.....+..+++++.+||.+||+.||+
T Consensus       177 ~l~~~~~-~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~  255 (276)
T d1uwha_         177 VIRMQDK-NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD  255 (276)
T ss_dssp             HHTTCSS-CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHhcccC-CCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHh
Confidence            9975432 124899999999999999999999998754322211 11122233444555678999999999999999999


Q ss_pred             CCCChhHHHHHHHhhcc
Q psy16840        287 SRPDFPTIRARLKHMKD  303 (413)
Q Consensus       287 ~Rps~~~i~~~l~~~~~  303 (413)
                      +|||+.+|++.|+.+..
T Consensus       256 ~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         256 ERPLFPQILASIELLAR  272 (276)
T ss_dssp             GSCCHHHHHHHHHHHHH
T ss_pred             HCcCHHHHHHHHHHHHH
Confidence            99999999999987754

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.7e-37  Score=281.12  Aligned_cols=164  Identities=23%  Similarity=0.394  Sum_probs=116.8

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCc--ccccccCccccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI--GEHQYYRSLLWK  204 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~--~~~~~~gt~~y~  204 (413)
                      .+..+..++.  ||+  +||+|||++++ +||||||+|||++.++++||+|||+|+..........  ......||+.|+
T Consensus       126 ~~~~~~~i~~--qia--~gl~yLH~~~i-iHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~  200 (299)
T d1jpaa_         126 TVIQLVGMLR--GIA--AGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT  200 (299)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEECTTCCEEECCC-----------------------CGGGS
T ss_pred             CHHHHHHHHH--HHH--HHHHHHhhCCC-ccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCcccc
Confidence            3333444455  777  99999999999 9999999999999999999999999987654332211  122346789999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      |||++.+..+    +.++|||||||++|||+| |..||.+.+..+....+. ...++..   +..+++.+.+||.+||+.
T Consensus       201 aPE~~~~~~~----~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~-~~~~~~~---~~~~~~~l~~li~~cl~~  272 (299)
T d1jpaa_         201 APEAIQYRKF----TSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE-QDYRLPP---PMDCPSALHQLMLDCWQK  272 (299)
T ss_dssp             CHHHHHSCCC----CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCCC---CTTCCHHHHHHHHHHTCS
T ss_pred             CHHHHhcCCC----CcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCC---CccchHHHHHHHHHHcCC
Confidence            9999988876    999999999999999998 899998755322211111 1222222   357899999999999999


Q ss_pred             CCCCCCChhHHHHHHHhhcc
Q psy16840        284 APESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l~~~~~  303 (413)
                      ||++|||+.+|++.|+++.+
T Consensus       273 ~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         273 DRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             STTTSCCHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHHHHHhc
Confidence            99999999999999988754

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-37  Score=279.25  Aligned_cols=166  Identities=20%  Similarity=0.328  Sum_probs=118.4

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +.+..+..++.  ||+  .||+|||++++ +||||||+||||+.++.+||+|||+|+................||+.|+|
T Consensus       107 ~~~~~~~~i~~--~i~--~gl~~lH~~~i-iHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~A  181 (283)
T d1mqba_         107 FSVLQLVGMLR--GIA--AGMKYLANMNY-VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA  181 (283)
T ss_dssp             SCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSC
T ss_pred             ccHHHHHHHHH--HHH--Hhhhhcccccc-ccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccC
Confidence            33444444555  777  99999999999 99999999999999999999999999876544333333445578999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      ||++.+..+    +.++|||||||++|||++|..||.................++..   +..+++.+.+||.+||+.||
T Consensus       182 PE~l~~~~~----~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~l~~li~~cl~~~p  254 (283)
T d1mqba_         182 PEAISYRKF----TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPT---PMDCPSAIYQLMMQCWQQER  254 (283)
T ss_dssp             HHHHHSCCC----CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC---CTTCBHHHHHHHHHHTCSST
T ss_pred             HHHHccCCC----CCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCC---chhhHHHHHHHHHHHCcCCH
Confidence            999988877    99999999999999999976665432211111111222233332   35788999999999999999


Q ss_pred             CCCCChhHHHHHHHhhcc
Q psy16840        286 ESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~~  303 (413)
                      ++|||+.+|++.|+.+..
T Consensus       255 ~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         255 ARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             TTSCCHHHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHHHHHhh
Confidence            999999999999987754

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-37  Score=281.76  Aligned_cols=191  Identities=24%  Similarity=0.340  Sum_probs=132.1

Q ss_pred             hhhhHhhhhhhhccCCccc-hhhcccccCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEec
Q psy16840         99 LNLLDAVKNHKIAHRPQET-LKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTD  177 (413)
Q Consensus        99 ~~l~~~l~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~D  177 (413)
                      .+|.++++.......+... ........+++..+..++.  ||+  .||+|||++++ |||||||+|||+++++.+||+|
T Consensus       103 g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--qi~--~gl~ylH~~~i-vHrDlKp~NILl~~~~~~Kl~D  177 (299)
T d1ywna1         103 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF--QVA--KGMEFLASRKC-IHRDLAARNILLSEKNVVKICD  177 (299)
T ss_dssp             CBHHHHHHHTGGGBCC-----------CBCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEECGGGCEEECC
T ss_pred             CcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHH--HHH--HHHHHHHhCCC-cCCcCCccceeECCCCcEEEcc
Confidence            3777777766543222111 1111122344555555555  777  99999999999 9999999999999999999999


Q ss_pred             cccccccccccCCCcccccccCcccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCCC
Q psy16840        178 FGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEE  256 (413)
Q Consensus       178 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~  256 (413)
                      ||+|+....... ........||+.|+|||++.+..+    +.++|||||||++|||++| ..||.+.............
T Consensus       178 FGla~~~~~~~~-~~~~~~~~gt~~y~APE~l~~~~~----~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~  252 (299)
T d1ywna1         178 FGLARDIYKDPD-YVRKGDARLPLKWMAPETIFDRVY----TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE  252 (299)
T ss_dssp             ------CCSCTT-SCCTTSCCCGGGGCCHHHHHHCCC----CHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH
T ss_pred             Ccchhhcccccc-ccccCceeeCccccchhHhhcCCC----CcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc
Confidence            999987543322 222345679999999999998877    9999999999999999986 5678764432222112222


Q ss_pred             CCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhc
Q psy16840        257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK  302 (413)
Q Consensus       257 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~  302 (413)
                      ..++.   .+..+++++.++|.+||+.||++|||+.+++++|+.+.
T Consensus       253 ~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il  295 (299)
T d1ywna1         253 GTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  295 (299)
T ss_dssp             TCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCC---CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            22332   23578999999999999999999999999999998764

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-37  Score=276.42  Aligned_cols=161  Identities=20%  Similarity=0.281  Sum_probs=122.0

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +....+..++.  ||+  .||+|||++|+ +||||||+|||+++++.+||+|||+|+........ ......+||+.|+|
T Consensus       100 l~e~~~~~i~~--qi~--~al~ylH~~~I-iHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~-~~~~~~~GT~~Y~A  173 (271)
T d1nvra_         100 MPEPDAQRFFH--QLM--AGVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-RLLNKMCGTLPYVA  173 (271)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCCGGGEEECTTCCEEECCCTTCEECEETTEE-CCBCCCCSCGGGSC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHcCC-ccCcccHHHEEECCCCCEEEccchhheeeccCCcc-ccccceeeCcCccC
Confidence            34444555666  888  99999999999 99999999999999999999999999876433221 22345689999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      ||++.+..+.   +.++|||||||++|||++|+.||................  +........+++++.+|+.+||+.||
T Consensus       174 PE~~~~~~~~---~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP  248 (271)
T d1nvra_         174 PELLKRREFH---AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK--KTYLNPWKKIDSAPLALLHKILVENP  248 (271)
T ss_dssp             THHHHCSSBC---HHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTT--CTTSTTGGGSCHHHHHHHHHHSCSST
T ss_pred             HhHhcCCCCC---CCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcC--CCCCCccccCCHHHHHHHHHHcCCCh
Confidence            9999887652   678999999999999999999997644222111100000  00011124678999999999999999


Q ss_pred             CCCCChhHHHHH
Q psy16840        286 ESRPDFPTIRAR  297 (413)
Q Consensus       286 ~~Rps~~~i~~~  297 (413)
                      ++|||+++++++
T Consensus       249 ~~R~t~~eil~h  260 (271)
T d1nvra_         249 SARITIPDIKKD  260 (271)
T ss_dssp             TTSCCHHHHTTC
T ss_pred             hHCcCHHHHhcC
Confidence            999999999764

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-37  Score=284.75  Aligned_cols=162  Identities=24%  Similarity=0.353  Sum_probs=128.5

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +++..+..++.  ||+  .||+|||++++ |||||||+|||++.++.+||+|||+|+....... ........||+.|+|
T Consensus       161 l~~~~~~~i~~--qi~--~gl~yLH~~~I-iHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~-~~~~~~~~gt~~y~a  234 (325)
T d1rjba_         161 LTFEDLLCFAY--QVA--KGMEFLEFKSC-VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN-YVVRGNARLPVKWMA  234 (325)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTE-EETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT-SEEETTEEECGGGCC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHhCCe-eeccCchhccccccCCeEEEeeccccccccCCCc-eeeeccccCCCccCC
Confidence            34444555555  777  99999999999 9999999999999999999999999987543322 222334568999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++.+..+    +.++|||||||++|||+| |..||.+.+.............++..   +..+++++.+||.+||+.|
T Consensus       235 PE~l~~~~~----~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~---p~~~~~~l~~li~~cl~~d  307 (325)
T d1rjba_         235 PESLFEGIY----TIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQ---PFYATEEIYIIMQSCWAFD  307 (325)
T ss_dssp             HHHHHHCCC----CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSS
T ss_pred             hHHHcCCCC----CcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCC---CCcCCHHHHHHHHHHcCCC
Confidence            999988877    999999999999999998 89999876543322222233333333   3678999999999999999


Q ss_pred             CCCCCChhHHHHHHHh
Q psy16840        285 PESRPDFPTIRARLKH  300 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~  300 (413)
                      |++|||+++|++.|..
T Consensus       308 P~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         308 SRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             GGGSCCHHHHHHHHHH
T ss_pred             hhHCcCHHHHHHHHhC
Confidence            9999999999998853

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-37  Score=276.45  Aligned_cols=152  Identities=25%  Similarity=0.425  Sum_probs=120.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++++ +||||||+|||++.++.+||+|||+|+................||+.|+|||++.+..+    
T Consensus       115 qi~--~gl~ylH~~~i-iHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~----  187 (277)
T d1xbba_         115 QVS--MGMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF----  187 (277)
T ss_dssp             HHH--HHHHHHHHTTE-ECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEE----
T ss_pred             HHH--HHHhhHHhCCc-ccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCC----
Confidence            666  99999999999 99999999999999999999999999876543333233344578999999999988877    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++|||++ |+.||.+.+..+....+ ....++.   .+..+|+++.+||.+||+.||++|||+.+|.+.
T Consensus       188 ~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i-~~~~~~~---~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~  263 (277)
T d1xbba_         188 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-EKGERMG---CPAGCPREMYDLMNLCWTYDVENRPGFAAVELR  263 (277)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-HTTCCCC---CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             CchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHH-HcCCCCC---CCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            999999999999999998 89999875432211111 1122332   236789999999999999999999999999888


Q ss_pred             HHhh
Q psy16840        298 LKHM  301 (413)
Q Consensus       298 l~~~  301 (413)
                      |+..
T Consensus       264 L~~~  267 (277)
T d1xbba_         264 LRNY  267 (277)
T ss_dssp             HHHH
T ss_pred             hhCH
Confidence            7764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-36  Score=276.44  Aligned_cols=162  Identities=24%  Similarity=0.402  Sum_probs=127.8

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..+..++.  ||+  .||+|||++++ +||||||+|||++.++.+||+|||+|+................||+.|+|||
T Consensus       108 ~~~~~~i~~--qi~--~gL~ylH~~~i-iHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE  182 (285)
T d1u59a_         108 VSNVAELLH--QVS--MGMKYLEEKNF-VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE  182 (285)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHHHhCCe-ecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCccccChH
Confidence            333444444  777  99999999999 9999999999999999999999999987654333333334557899999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      ++.+..+    +.++|||||||++|||+| |..||.+.+..+....+ ....++.   .++.+|+++.+||.+||+.||+
T Consensus       183 ~~~~~~~----~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i-~~~~~~~---~p~~~~~~l~~li~~cl~~~p~  254 (285)
T d1u59a_         183 CINFRKF----SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI-EQGKRME---CPPECPPELYALMSDCWIYKWE  254 (285)
T ss_dssp             HHHHCEE----CHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHH-HTTCCCC---CCTTCCHHHHHHHHHTTCSSGG
T ss_pred             HHhCCCC----CccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCC---CCCcCCHHHHHHHHHHcCCCHh
Confidence            9988877    999999999999999998 89999875533222111 1222332   2467899999999999999999


Q ss_pred             CCCChhHHHHHHHhhc
Q psy16840        287 SRPDFPTIRARLKHMK  302 (413)
Q Consensus       287 ~Rps~~~i~~~l~~~~  302 (413)
                      +|||+.+|.+.|+...
T Consensus       255 ~RPs~~~i~~~L~~~~  270 (285)
T d1u59a_         255 DRPDFLTVEQRMRACY  270 (285)
T ss_dssp             GSCCHHHHHHHHHHHH
T ss_pred             HCcCHHHHHHHHHHHH
Confidence            9999999999887653

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-36  Score=271.87  Aligned_cols=152  Identities=25%  Similarity=0.494  Sum_probs=109.7

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++++ +||||||+|||++.++.+||+|||+++........  ......||+.|+|||++.+..+    
T Consensus       109 qia--~gl~~lH~~~i-iHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~----  179 (263)
T d1sm2a_         109 DVC--EGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT--SSTGTKFPVKWASPEVFSFSRY----  179 (263)
T ss_dssp             HHH--HHHHHHHHTTC-CCTTCSGGGEEECGGGCEEECSCC--------------------CTTSCCHHHHTTCCC----
T ss_pred             HHH--HHHHhhhccce-eecccchhheeecCCCCeEecccchheeccCCCce--eecceecCcccCChHHhcCCCC----
Confidence            666  99999999999 99999999999999999999999999876433221  2234578999999999998877    


Q ss_pred             CccchhHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++|||+|+ .+||...+....... .....++.   .+..+++++.++|.+||+.||++|||+++|++.
T Consensus       180 ~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~-i~~~~~~~---~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         180 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLY---KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHH-HHHTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHH-HHhcCCCC---CccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            9999999999999999995 555554332111111 11112222   235688999999999999999999999999999


Q ss_pred             HHhhcc
Q psy16840        298 LKHMKD  303 (413)
Q Consensus       298 l~~~~~  303 (413)
                      |+++.+
T Consensus       256 L~~i~e  261 (263)
T d1sm2a_         256 LAEIAE  261 (263)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            988753

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-36  Score=274.23  Aligned_cols=155  Identities=17%  Similarity=0.250  Sum_probs=112.5

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCC-----CcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSP-----IGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL  201 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~-----iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~  201 (413)
                      +...+..++.  ||+  .||+|||+++     + |||||||+|||++.++.+||+|||+|+.......   ......||+
T Consensus       107 ~e~~~~~i~~--qi~--~al~ylH~~~~~~~~I-iHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~---~~~~~~gt~  178 (269)
T d2java1         107 DEEFVLRVMT--QLT--LALKECHRRSDGGHTV-LHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS---FAKAFVGTP  178 (269)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHHCC----------CCGGGEEECTTSCEEECCHHHHHHC--------------CCC
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHhcCCCCCE-EeCcCchhhcCcCCCCcEEEeeccceeecccCCC---ccccCCCCc
Confidence            3444455555  788  9999999865     7 9999999999999999999999999987643221   234567899


Q ss_pred             cccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHh
Q psy16840        202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCW  281 (413)
Q Consensus       202 ~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (413)
                      .|+|||++.+..+    +.++|||||||++|||++|+.||.+.+..+....+.....    +.++..+++++.+||.+||
T Consensus       179 ~Y~APE~l~~~~~----~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~s~~l~~li~~~L  250 (269)
T d2java1         179 YYMSPEQMNRMSY----NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF----RRIPYRYSDELNEIITRML  250 (269)
T ss_dssp             SCCCHHHHTTCCC----CHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC----CCCCTTSCHHHHHHHHHHT
T ss_pred             ccCCHHHHcCCCC----ChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC----CCCCcccCHHHHHHHHHHc
Confidence            9999999988776    9999999999999999999999987543222111111111    1234578999999999999


Q ss_pred             ccCCCCCCChhHHHHH
Q psy16840        282 AEAPESRPDFPTIRAR  297 (413)
Q Consensus       282 ~~~P~~Rps~~~i~~~  297 (413)
                      +.||.+|||+.+++++
T Consensus       251 ~~dp~~Rps~~ell~h  266 (269)
T d2java1         251 NLKDYHRPSVEEILEN  266 (269)
T ss_dssp             CSSGGGSCCHHHHHTS
T ss_pred             CCChhHCcCHHHHHhC
Confidence            9999999999999754

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-36  Score=271.76  Aligned_cols=161  Identities=27%  Similarity=0.449  Sum_probs=123.0

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..+..++.  ||+  +||.|||++++ +||||||+|||+++++.+||+|||+|+......  ........||+.|+||
T Consensus       107 ~~~~~~~i~~--qi~--~gl~~lH~~~i-vHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~--~~~~~~~~gt~~y~AP  179 (272)
T d1qpca_         107 TINKLLDMAA--QIA--EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARLIEDNE--YTAREGAKFPIKWTAP  179 (272)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECTTSCEEECCCTTCEECSSSC--EECCTTCCCCTTTSCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCc-ccCccchhheeeecccceeeccccceEEccCCc--cccccccCCcccccCh
Confidence            3334444555  777  99999999999 999999999999999999999999998764322  1223345789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP-FGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |++.+..+    +.++|||||||++|||+||..| |...+..+.. .......++..   +..+++++.+|+.+||+.||
T Consensus       180 E~~~~~~~----~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~-~~i~~~~~~~~---p~~~~~~l~~li~~cl~~~P  251 (272)
T d1qpca_         180 EAINYGTF----TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-QNLERGYRMVR---PDNCPEELYQLMRLCWKERP  251 (272)
T ss_dssp             HHHHHCEE----CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-HHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSG
T ss_pred             HHHhCCCC----CchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHH-HHHHhcCCCCC---cccChHHHHHHHHHHcCCCH
Confidence            99988776    9999999999999999996555 4432211111 11112222222   36789999999999999999


Q ss_pred             CCCCChhHHHHHHHhhc
Q psy16840        286 ESRPDFPTIRARLKHMK  302 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~  302 (413)
                      ++|||+++|++.|+.+.
T Consensus       252 ~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         252 EDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             GGSCCHHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHhhhhh
Confidence            99999999999888764

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.6e-36  Score=271.63  Aligned_cols=165  Identities=26%  Similarity=0.408  Sum_probs=126.1

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+|+.......  .......|++.|+||
T Consensus       113 ~~~~~~~i~~--qi~--~gL~yLH~~~i-iHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~--~~~~~~~g~~~y~aP  185 (287)
T d1opja_         113 SAVVLLYMAT--QIS--SAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAP  185 (287)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSS--EEETTEEECGGGCCH
T ss_pred             HHHHHHHHHH--HHH--HHHHHHHHCCc-ccCccccCeEEECCCCcEEEccccceeecCCCCc--eeeccccccccccCh
Confidence            3334444555  777  99999999999 9999999999999999999999999987643221  222334578999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+..+    +.++|||||||++|||++|..||.................++.   .+..+++++.+||.+||+.||+
T Consensus       186 E~~~~~~~----~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~l~~li~~cl~~dP~  258 (287)
T d1opja_         186 ESLAYNKF----SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME---RPEGCPEKVYELMRACWQWNPS  258 (287)
T ss_dssp             HHHHHCCC----SHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHHcCCCC----CchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCC---CCccchHHHHHHHHHHcCCCHh
Confidence            99988877    9999999999999999997766543221111111112222332   2367899999999999999999


Q ss_pred             CCCChhHHHHHHHhhcccC
Q psy16840        287 SRPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       287 ~Rps~~~i~~~l~~~~~~~  305 (413)
                      +|||+.+|++.|+.+....
T Consensus       259 ~Rps~~ei~~~L~~~~~~~  277 (287)
T d1opja_         259 DRPSFAEIHQAFETMFQES  277 (287)
T ss_dssp             GSCCHHHHHHHHHHTTSSS
T ss_pred             HCcCHHHHHHHHHHHHHhC
Confidence            9999999999998876543

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-35  Score=267.29  Aligned_cols=152  Identities=16%  Similarity=0.229  Sum_probs=121.3

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+|+.....     ......||+.|+||
T Consensus       104 ~e~~~~~i~~--qi~--~al~~lH~~~i-vHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~-----~~~~~~Gt~~Y~AP  173 (263)
T d2j4za1         104 DEQRTATYIT--ELA--NALSYCHSKRV-IHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPP  173 (263)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTSCEEECCCCSCSCCCCC-----CCEETTEEGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCe-eeeeeccccceecCCCCEeecccceeeecCCC-----cccccCCCCcccCH
Confidence            3333444555  888  99999999999 99999999999999999999999999765322     23456799999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+..+    +.++|||||||++|||++|+.||.+.+.......+....  +   .++..+++++.+|+.+||+.||+
T Consensus       174 E~~~~~~~----~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~--~---~~p~~~s~~~~~li~~~L~~dp~  244 (263)
T d2j4za1         174 EMIEGRMH----DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE--F---TFPDFVTEGARDLISRLLKHNPS  244 (263)
T ss_dssp             HHHTTCCC----CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC--C---CCCTTSCHHHHHHHHHHTCSSGG
T ss_pred             HHHcCCCC----CchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--C---CCCccCCHHHHHHHHHHccCCHh
Confidence            99998876    899999999999999999999998754322222111111  1   12356889999999999999999


Q ss_pred             CCCChhHHHHH
Q psy16840        287 SRPDFPTIRAR  297 (413)
Q Consensus       287 ~Rps~~~i~~~  297 (413)
                      +|||+++++++
T Consensus       245 ~R~t~~eil~h  255 (263)
T d2j4za1         245 QRPMLREVLEH  255 (263)
T ss_dssp             GSCCHHHHHTC
T ss_pred             HCcCHHHHHcC
Confidence            99999999864

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1e-35  Score=273.44  Aligned_cols=157  Identities=17%  Similarity=0.163  Sum_probs=110.8

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEc---CCeEEEEeccccccccccccCCCcccccccCcccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVT---SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||+.   .++.+||+|||+|+......    .....+||+.|
T Consensus       105 ~e~~~~~~~~--qi~--~al~ylH~~~i-iHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~----~~~~~~GT~~y  175 (307)
T d1a06a_         105 TERDASRLIF--QVL--DAVKYLHDLGI-VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS----VLSTACGTPGY  175 (307)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEESSSSTTCCEEECCC----------------------CTT
T ss_pred             CHHHHHHHHH--HHH--HHHHhhhhcee-eeEEecccceeecccCCCceEEEeccceeEEccCCC----eeeeeeeCccc
Confidence            3334444555  888  99999999999 9999999999995   46899999999998654322    12346799999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      +|||++.+..+    +.++|||||||++|||++|..||.+.........+......+.. .....+++++.+||.+||+.
T Consensus       176 ~APE~~~~~~~----~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~  250 (307)
T d1a06a_         176 VAPEVLAQKPY----SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS-PYWDDISDSAKDFIRHLMEK  250 (307)
T ss_dssp             SCHHHHTTCCC----CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCT-TTTTTSCHHHHHHHHHHSCS
T ss_pred             cCcHHHcCCCC----CcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCC-ccccCCCHHHHHHHHHHccC
Confidence            99999998876    89999999999999999999999875432222222222211111 12357899999999999999


Q ss_pred             CCCCCCChhHHHHH
Q psy16840        284 APESRPDFPTIRAR  297 (413)
Q Consensus       284 ~P~~Rps~~~i~~~  297 (413)
                      ||++|||+.|++++
T Consensus       251 dP~~R~s~~eil~h  264 (307)
T d1a06a_         251 DPEKRFTCEQALQH  264 (307)
T ss_dssp             SGGGSCCHHHHHHS
T ss_pred             CHhHCcCHHHHhcC
Confidence            99999999999875

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-36  Score=271.99  Aligned_cols=162  Identities=23%  Similarity=0.384  Sum_probs=125.9

Q ss_pred             hhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        128 IIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       128 ~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..+..++.  ||+  .||.|||++++ +||||||+|||++.++.+||+|||+++................|+..|+|||
T Consensus       110 ~~~~~~~~~--qi~--~gl~ylH~~~i-iHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE  184 (273)
T d1u46a_         110 LGTLSRYAV--QVA--EGMGYLESKRF-IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE  184 (273)
T ss_dssp             HHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHH
T ss_pred             HHHHHHHHH--HHH--HHHHHhhhCCE-eeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHH
Confidence            333344444  777  99999999999 9999999999999999999999999987654433333334456788999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      ++.+..+    +.++|||||||++|||+| |..||.+.+..+....+.....++..   +..+|+++.+||.+||+.||+
T Consensus       185 ~~~~~~~----~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~  257 (273)
T d1u46a_         185 SLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR---PEDCPQDIYNVMVQCWAHKPE  257 (273)
T ss_dssp             HHHHCEE----EHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC---CTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHhCCCC----CcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCC---cccccHHHHHHHHHHcCCChh
Confidence            9998877    999999999999999998 89999876543332333333333332   357889999999999999999


Q ss_pred             CCCChhHHHHHHHhh
Q psy16840        287 SRPDFPTIRARLKHM  301 (413)
Q Consensus       287 ~Rps~~~i~~~l~~~  301 (413)
                      +|||+.+|++.|++.
T Consensus       258 ~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         258 DRPTFVALRDFLLEA  272 (273)
T ss_dssp             GSCCHHHHHHHHHHH
T ss_pred             HCcCHHHHHHHHHhc
Confidence            999999999988764

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-35  Score=270.59  Aligned_cols=162  Identities=17%  Similarity=0.236  Sum_probs=122.2

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +....+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+|+.......   ......||+.|+|
T Consensus       107 l~e~~~~~i~~--qi~--~gL~ylH~~~i-vHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~---~~~~~~Gt~~y~A  178 (288)
T d2jfla1         107 LTESQIQVVCK--QTL--DALNYLHDNKI-IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ---RRDSFIGTPYWMA  178 (288)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECHHHHH---HHTCCCSCCTTCC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCE-EEeecChhheeECCCCCEEEEechhhhccCCCcc---cccccccccccCC
Confidence            34444455555  888  99999999999 9999999999999999999999999876532211   1234679999999


Q ss_pred             cccccCCCC-CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHA-PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~-~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++..... ...++.++|||||||++|||++|+.||.+.+..+....+.... .+.. ..+..+++++.+||.+||+.|
T Consensus       179 PE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~-~~~~-~~~~~~s~~~~~li~~~L~~d  256 (288)
T d2jfla1         179 PEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE-PPTL-AQPSRWSSNFKDFLKKCLEKN  256 (288)
T ss_dssp             HHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSC-CCCC-SSGGGSCHHHHHHHHHHSCSS
T ss_pred             HHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC-CCCC-CccccCCHHHHHHHHHHccCC
Confidence            999854322 1234899999999999999999999998755333222111111 1111 123578899999999999999


Q ss_pred             CCCCCChhHHHHH
Q psy16840        285 PESRPDFPTIRAR  297 (413)
Q Consensus       285 P~~Rps~~~i~~~  297 (413)
                      |.+|||+.+++++
T Consensus       257 p~~R~t~~ell~h  269 (288)
T d2jfla1         257 VDARWTTSQLLQH  269 (288)
T ss_dssp             TTTSCCHHHHTTS
T ss_pred             hhHCcCHHHHhcC
Confidence            9999999999875

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-35  Score=269.20  Aligned_cols=158  Identities=18%  Similarity=0.259  Sum_probs=123.3

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +....+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+|+......   ......+||+.|+|
T Consensus       113 l~~~~~~~i~~--qi~--~aL~yLH~~~i-iHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~---~~~~~~~gt~~Y~a  184 (293)
T d1yhwa1         113 MDEGQIAAVCR--ECL--QALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---SKRSTMVGTPYWMA  184 (293)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTCCEEECCCTTCEECCSTT---CCBCCCCSCGGGCC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCC-cccCCcHHHeEECCCCcEeeccchhheeecccc---ccccccccCCCccC
Confidence            34444455666  888  99999999999 999999999999999999999999998764322   22345679999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      ||++.+..+    +.++|||||||++|+|++|..||.+.+............ .+.. ..+..+++++.+||.+||+.||
T Consensus       185 PE~~~~~~~----~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~-~~~~-~~~~~~s~~~~~li~~~L~~dP  258 (293)
T d1yhwa1         185 PEVVTRKAY----GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG-TPEL-QNPEKLSAIFRDFLNRCLDMDV  258 (293)
T ss_dssp             HHHHSSSCB----CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHC-SCCC-SSGGGSCHHHHHHHHHHTCSST
T ss_pred             hhhhcCCCC----CchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCC-CCCC-CCcccCCHHHHHHHHHHccCCh
Confidence            999998877    899999999999999999999997654222111111111 1111 1235688999999999999999


Q ss_pred             CCCCChhHHHHH
Q psy16840        286 ESRPDFPTIRAR  297 (413)
Q Consensus       286 ~~Rps~~~i~~~  297 (413)
                      .+|||+.+++++
T Consensus       259 ~~R~s~~eil~H  270 (293)
T d1yhwa1         259 EKRGSAKELLQH  270 (293)
T ss_dssp             TTSCCHHHHTTC
T ss_pred             hHCcCHHHHhcC
Confidence            999999999865

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-35  Score=263.60  Aligned_cols=154  Identities=20%  Similarity=0.352  Sum_probs=118.2

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCC--CcccCCCCCCCeEEc-CCeEEEEeccccccccccccCCCcccccccCcccc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSP--IGCHGNLKSSNCVVT-SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~--iiiHrdlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      +...+..++.  ||+  .||+|||+++  + +||||||+|||++ .++.+||+|||+|+.....     .....+||+.|
T Consensus       110 ~~~~~~~~~~--qi~--~gl~yLH~~~~~I-iHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~-----~~~~~~GT~~Y  179 (270)
T d1t4ha_         110 KIKVLRSWCR--QIL--KGLQFLHTRTPPI-IHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-----FAKAVIGTPEF  179 (270)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHTSSSCC-CCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT-----SBEESCSSCCC
T ss_pred             cHHHHHHHHH--HHH--HHHHHHHHCCCCE-EeCCcChhhceeeCCCCCEEEeecCcceeccCC-----ccCCcccCccc
Confidence            3333444555  888  9999999988  8 9999999999997 4789999999999764321     23456899999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      +|||++.+. +    +.++|||||||++|||++|+.||.+................|  ..++..+++++.+||.+||+.
T Consensus       180 ~aPE~~~~~-~----~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~li~~~l~~  252 (270)
T d1t4ha_         180 MAPEMYEEK-Y----DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIPEVKEIIEGCIRQ  252 (270)
T ss_dssp             CCGGGGGTC-C----CTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--GGGGGCCCHHHHHHHHHHSCS
T ss_pred             cCHHHhCCC-C----CCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCC--cccCccCCHHHHHHHHHHccC
Confidence            999998763 4    899999999999999999999997644222111111222222  223456889999999999999


Q ss_pred             CCCCCCChhHHHHH
Q psy16840        284 APESRPDFPTIRAR  297 (413)
Q Consensus       284 ~P~~Rps~~~i~~~  297 (413)
                      ||++|||+.|++++
T Consensus       253 dp~~R~s~~ell~H  266 (270)
T d1t4ha_         253 NKDERYSIKDLLNH  266 (270)
T ss_dssp             SGGGSCCHHHHHTS
T ss_pred             CHhHCcCHHHHhCC
Confidence            99999999999764

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.2e-35  Score=271.28  Aligned_cols=163  Identities=25%  Similarity=0.379  Sum_probs=127.0

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +++..+..++.  ||+  .||+|||++++ |||||||+|||++.++.+||+|||+|+....... ........||+.|+|
T Consensus       137 l~~~~~~~i~~--qi~--~gl~ylH~~~i-vHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~-~~~~~~~~~~~~y~a  210 (301)
T d1lufa_         137 LSCAEQLCIAR--QVA--AGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSADY-YKADGNDAIPIRWMP  210 (301)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC-BC----CCBCGGGCC
T ss_pred             CCHHHHHHHHH--HHH--HHhhhcccCCe-EeeEEcccceEECCCCcEEEccchhheeccCCcc-ccccCCCCcCcCcCC
Confidence            44555555666  777  99999999999 9999999999999999999999999986643322 222345578899999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCC-CCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRR-GPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||.+.+..+    +.++|||||||++|||++|. +||.+.+..+....+.. ..++.   .+..+++++.+||.+||+.|
T Consensus       211 PE~~~~~~~----t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~-~~~~~---~p~~~~~~~~~li~~cl~~~  282 (301)
T d1lufa_         211 PESIFYNRY----TTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRD-GNILA---CPENCPLELYNLMRLCWSKL  282 (301)
T ss_dssp             HHHHHHCCC----CHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT-TCCCC---CCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHccCCC----ChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHc-CCCCC---CCccchHHHHHHHHHHcCCC
Confidence            999998877    99999999999999999985 57776543322222211 12222   34678999999999999999


Q ss_pred             CCCCCChhHHHHHHHhhc
Q psy16840        285 PESRPDFPTIRARLKHMK  302 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~  302 (413)
                      |++|||+.+|++.|+++.
T Consensus       283 P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         283 PADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             GGGSCCHHHHHHHHHHTT
T ss_pred             hhHCcCHHHHHHHHHHhc
Confidence            999999999999999875

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-35  Score=267.31  Aligned_cols=162  Identities=23%  Similarity=0.400  Sum_probs=117.4

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +++..+..++.  ||+  .||.|||++++ +||||||+||+++.++.+||+|||+|+......  ........||+.|+|
T Consensus       105 l~~~~~~~~~~--qi~--~gl~ylH~~~i-iHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~--~~~~~~~~gt~~y~a  177 (273)
T d1mp8a_         105 LDLASLILYAY--QLS--TALAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST--YYKASKGKLPIKWMA  177 (273)
T ss_dssp             SCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEEEETTEEEECC---------------------CCGGGCC
T ss_pred             CCHHHHHHHHH--HHH--HHhhhhcccCe-eccccchhheeecCCCcEEEccchhheeccCCc--ceeccceecCcccch
Confidence            34444445555  777  99999999999 999999999999999999999999998754322  122334568999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++.+..+    +.++|||||||++|||++ |.+||.+.+..+....+.. ..++.   .++.+|+++.+||.+||+.|
T Consensus       178 pE~l~~~~~----~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~-~~~~~---~~~~~~~~~~~li~~cl~~d  249 (273)
T d1mp8a_         178 PESINFRRF----TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-GERLP---MPPNCPPTLYSLMTKCWAYD  249 (273)
T ss_dssp             HHHHHHCCC----SHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-TCCCC---CCTTCCHHHHHHHHHHTCSS
T ss_pred             hhHhccCCC----CCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCC---CCCCCCHHHHHHHHHHcCCC
Confidence            999988877    999999999999999998 8999987654332222211 22222   34678999999999999999


Q ss_pred             CCCCCChhHHHHHHHhhc
Q psy16840        285 PESRPDFPTIRARLKHMK  302 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~  302 (413)
                      |++|||+.+|++.|+.+.
T Consensus       250 p~~Rps~~ei~~~L~~i~  267 (273)
T d1mp8a_         250 PSRRPRFTELKAQLSTIL  267 (273)
T ss_dssp             GGGSCCHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHHH
Confidence            999999999999987764

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-35  Score=272.01  Aligned_cols=164  Identities=23%  Similarity=0.343  Sum_probs=125.2

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +++..+..++.  ||+  .||+|||++++ |||||||+|||++.++.+||+|||+|+........ .......||+.|+|
T Consensus       108 ~~~~~~~~i~~--qi~--~gl~yLH~~~i-iHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~gt~~y~A  181 (317)
T d1xkka_         108 IGSQYLLNWCV--QIA--KGMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHAEGGKVPIKWMA  181 (317)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC---------CCTTTSC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHcCc-ccCcchhhcceeCCCCCeEeeccccceeccccccc-ccccccccCccccC
Confidence            34444445555  777  99999999999 99999999999999999999999999876543222 22234468999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||++.+..+    +.++|||||||++|||+| |..||.+.+..+... ......++..   +..+++++.+|+.+||+.|
T Consensus       182 PE~l~~~~~----~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~-~i~~~~~~~~---p~~~~~~~~~li~~cl~~d  253 (317)
T d1xkka_         182 LESILHRIY----THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILEKGERLPQ---PPICTIDVYMIMVKCWMID  253 (317)
T ss_dssp             HHHHHHCCC----CHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHH-HHHHTCCCCC---CTTBCHHHHHHHHHHTCSS
T ss_pred             hHHHhcCCC----ChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHH-HHHcCCCCCC---CcccCHHHHHHHHHhCCCC
Confidence            999988877    999999999999999998 788997754332211 1112222322   3578899999999999999


Q ss_pred             CCCCCChhHHHHHHHhhcc
Q psy16840        285 PESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~~  303 (413)
                      |.+|||+.+|+..|..+..
T Consensus       254 P~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         254 ADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999887643

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=9.5e-35  Score=267.06  Aligned_cols=156  Identities=17%  Similarity=0.341  Sum_probs=119.7

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||++|+ |||||||+|||++.++.+||+|||+|+....       .....||+.|+||
T Consensus       113 ~e~~~~~i~~--qi~--~aL~yLH~~~i-iHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~-------~~~~~GT~~Y~AP  180 (309)
T d1u5ra_         113 QEVEIAAVTH--GAL--QGLAYLHSHNM-IHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANSFVGTPYWMAP  180 (309)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-BCCCCSGGGEEEETTTEEEECCCTTCBSSSS-------BCCCCSCGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCE-eccCCCcceEEECCCCCEEEeecccccccCC-------CCccccCccccCH
Confidence            4444445555  888  99999999999 9999999999999999999999999876432       2345799999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+... ..|+.++|||||||++|||++|..||.+.+.......+.... .+..  .+..+++++.+||.+||+.||.
T Consensus       181 E~~~~~~~-~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~-~~~~--~~~~~s~~~~~li~~~L~~dP~  256 (309)
T d1u5ra_         181 EVILAMDE-GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-SPAL--QSGHWSEYFRNFVDSCLQKIPQ  256 (309)
T ss_dssp             HHHTTTTS-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-CCCC--SCTTSCHHHHHHHHHHTCSSGG
T ss_pred             HHHhccCC-CCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC-CCCC--CCCCCCHHHHHHHHHHCcCChh
Confidence            99875432 124889999999999999999999997654222111111111 1111  1246889999999999999999


Q ss_pred             CCCChhHHHHHH
Q psy16840        287 SRPDFPTIRARL  298 (413)
Q Consensus       287 ~Rps~~~i~~~l  298 (413)
                      +|||+.+++++-
T Consensus       257 ~Rpt~~ell~Hp  268 (309)
T d1u5ra_         257 DRPTSEVLLKHR  268 (309)
T ss_dssp             GSCCHHHHTTCH
T ss_pred             HCcCHHHHHhCH
Confidence            999999998753

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-35  Score=262.47  Aligned_cols=155  Identities=24%  Similarity=0.414  Sum_probs=123.7

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCccccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLR  210 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (413)
                      +..++.  |++  +||+|||++|+ +||||||+|||+++++.+||+|||+++.......  .......||+.|+|||++.
T Consensus       102 ~~~i~~--qi~--~gl~~LH~~~i-iH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~--~~~~~~~~t~~y~aPE~~~  174 (258)
T d1k2pa_         102 LLEMCK--DVC--EAMEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY--TSSVGSKFPVRWSPPEVLM  174 (258)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTB-CCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSC--CCCCCSCCCGGGCCHHHHH
T ss_pred             HHHHHH--HHH--HHHHHHhhcCc-ccccccceeEEEcCCCcEEECcchhheeccCCCc--eeecccCCCCCcCCcHHhc
Confidence            334444  666  99999999999 9999999999999999999999999986643322  2233457899999999999


Q ss_pred             CCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        211 DTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       211 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      +..+    +.++|||||||++|||+| |+.||.+.+..+....+. ...++.   .+..+++++.+||.+||+.||++||
T Consensus       175 ~~~~----~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~-~~~~~~---~p~~~~~~l~~li~~cl~~dP~~RP  246 (258)
T d1k2pa_         175 YSKF----SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLY---RPHLASEKVYTIMYSCWHEKADERP  246 (258)
T ss_dssp             HCCC----CHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH-TTCCCC---CCTTCCHHHHHHHHHTTCSSGGGSC
T ss_pred             CCCC----CcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHH-hCCCCC---CcccccHHHHHHHHHHccCCHhHCc
Confidence            8877    999999999999999998 899998765333222222 222222   2357889999999999999999999


Q ss_pred             ChhHHHHHHHh
Q psy16840        290 DFPTIRARLKH  300 (413)
Q Consensus       290 s~~~i~~~l~~  300 (413)
                      |+.++++.|..
T Consensus       247 t~~eil~~L~d  257 (258)
T d1k2pa_         247 TFKILLSNILD  257 (258)
T ss_dssp             CHHHHHHHHHC
T ss_pred             CHHHHHHHhhC
Confidence            99999998854

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-35  Score=271.35  Aligned_cols=155  Identities=22%  Similarity=0.303  Sum_probs=115.5

Q ss_pred             hhHhhhccccCCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      ..+..++.  ||+  .||.|||+ +|| +||||||+|||++.++.+||+|||+|+......     ..+.+||+.|+|||
T Consensus       104 ~~~~~~~~--qil--~aL~yLH~~~~I-iHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-----~~~~~GT~~Y~APE  173 (322)
T d1s9ja_         104 QILGKVSI--AVI--KGLTYLREKHKI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPE  173 (322)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHHHCC-CCSCCSGGGEEECTTCCEEECCCCCCHHHHHHT-----C---CCSSCCCCHH
T ss_pred             HHHHHHHH--HHH--HHHHHHHHhCCE-EccccCHHHeeECCCCCEEEeeCCCccccCCCc-----cccccCCccccCch
Confidence            33444555  888  99999997 588 999999999999999999999999998764322     23568999999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--------CC----------------CCCCCCCC--
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--------ED----------------CEEPFRPN--  261 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--------~~----------------~~~~~~~~--  261 (413)
                      ++.+..+    +.++||||+||++|||++|+.||.+.+......        ..                ......+.  
T Consensus       174 vl~~~~y----~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (322)
T d1s9ja_         174 RLQGTHY----SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMA  249 (322)
T ss_dssp             HHHCSCC----CTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCC
T ss_pred             HHcCCCC----CcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchh
Confidence            9998877    999999999999999999999997644211000        00                00000000  


Q ss_pred             -------------cccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        262 -------------LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       262 -------------~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                                   ........++++.+|+.+||..||.+|||+++++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H  298 (322)
T d1s9ja_         250 IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  298 (322)
T ss_dssp             HHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence                         000112367899999999999999999999999875

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-35  Score=265.95  Aligned_cols=156  Identities=17%  Similarity=0.253  Sum_probs=119.5

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      +...+..++.  |++  .||+|||++|+ |||||||+|||+++++.+||+|||+|+....... .......+||+.|+||
T Consensus       106 ~e~~~~~~~~--qi~--~al~ylH~~~i-iHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~-~~~~~~~~GT~~Y~AP  179 (288)
T d1uu3a_         106 DETCTRFYTA--EIV--SALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANSFVGTAQYVSP  179 (288)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECTTSCEEECCCTTCEECC-----------CCCCGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHhhccccE-EcCcCCccccccCCCceEEecccccceecccCCc-ccccccccCCccccCc
Confidence            3334444555  888  99999999999 9999999999999999999999999987643222 1223456799999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+..+    +.++|||||||++|||++|..||.+.+.......+....  +   .++..+++++.+||.+||+.||.
T Consensus       180 E~~~~~~~----~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~--~---~~p~~~s~~~~~li~~~L~~dP~  250 (288)
T d1uu3a_         180 ELLTEKSA----CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE--Y---DFPEKFFPKARDLVEKLLVLDAT  250 (288)
T ss_dssp             HHHHTCCC----CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTC--C---CCCTTCCHHHHHHHHTTSCSSGG
T ss_pred             eeeccCCC----CcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCC--C---CCCccCCHHHHHHHHHHccCCHh
Confidence            99998877    999999999999999999999998754322222222111  1   12357889999999999999999


Q ss_pred             CCCChhHHHHH
Q psy16840        287 SRPDFPTIRAR  297 (413)
Q Consensus       287 ~Rps~~~i~~~  297 (413)
                      +|||++|++..
T Consensus       251 ~R~t~~e~~~~  261 (288)
T d1uu3a_         251 KRLGCEEMEGY  261 (288)
T ss_dssp             GSTTSGGGTCH
T ss_pred             HCcCHHHHcCC
Confidence            99999997543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-34  Score=262.85  Aligned_cols=164  Identities=24%  Similarity=0.359  Sum_probs=119.5

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ++..+..++.  ||+  .||+|||++++ +||||||+|||++.++.+||+|||+|+.......  .......||+.|+||
T Consensus       111 ~~~~~~~i~~--~i~--~gl~~LH~~~i-vH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~--~~~~~~~gt~~y~aP  183 (285)
T d1fmka3         111 RLPQLVDMAA--QIA--SGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARLIEDNEY--TARQGAKFPIKWTAP  183 (285)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCCCTTC----------------CCGGGSCH
T ss_pred             hHHHHHHHHH--HHH--HHHHHHhhhhe-ecccccceEEEECCCCcEEEcccchhhhccCCCc--eeeccccccccccCh
Confidence            3444444455  677  99999999999 9999999999999999999999999987643322  223345789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC-CCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE-PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |++.+..+    +.++|||||||++|||++|..||....... ....+ ....++.   .+..+++++.++|.+||+.||
T Consensus       184 E~~~~~~~----~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i-~~~~~~~---~~~~~~~~l~~li~~cl~~dP  255 (285)
T d1fmka3         184 EAALYGRF----TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMP---CPPECPESLHDLMCQCWRKEP  255 (285)
T ss_dssp             HHHHHCCC----CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-HTTCCCC---CCTTSCHHHHHHHHHHTCSSG
T ss_pred             HHHhCCCC----CcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHH-HhcCCCC---CCcccCHHHHHHHHHHcccCH
Confidence            99988877    999999999999999999766554322111 11111 1122222   236789999999999999999


Q ss_pred             CCCCChhHHHHHHHhhcccC
Q psy16840        286 ESRPDFPTIRARLKHMKDGK  305 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~~~~  305 (413)
                      ++|||+++|++.|+......
T Consensus       256 ~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         256 EERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             GGSCCHHHHHHHHHTTTSCS
T ss_pred             hHCcCHHHHHHHHhhhhcCC
Confidence            99999999999998876543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-34  Score=262.18  Aligned_cols=162  Identities=25%  Similarity=0.338  Sum_probs=124.8

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCC-cccccccCcccccCcccc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~  209 (413)
                      +..++.  |++  .||.|||+.++ +||||||+|||+++++.+||+|||+++......... .......||+.|+|||.+
T Consensus       132 ~~~i~~--qia--~gL~~lH~~~i-iHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  206 (311)
T d1r0pa_         132 LIGFGL--QVA--KGMKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL  206 (311)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHH
T ss_pred             HHHHHH--HHH--HhhhhhcccCc-ccCCccHHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHH
Confidence            344455  777  99999999999 999999999999999999999999998765433222 223345789999999999


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP  289 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp  289 (413)
                      .+..+    +.++||||||+++|||++|..||.................++..   +..+++++.+||.+||+.||++||
T Consensus       207 ~~~~~----~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~---p~~~~~~l~~li~~cl~~dP~~RP  279 (311)
T d1r0pa_         207 QTQKF----TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---PEYCPDPLYEVMLKCWHPKAEMRP  279 (311)
T ss_dssp             HHCCC----CHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             hcCCC----CChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC---cccCcHHHHHHHHHHcCCCHhHCc
Confidence            88777    99999999999999999988887653322111111112223322   367889999999999999999999


Q ss_pred             ChhHHHHHHHhhccc
Q psy16840        290 DFPTIRARLKHMKDG  304 (413)
Q Consensus       290 s~~~i~~~l~~~~~~  304 (413)
                      |+.+|++.|+.+...
T Consensus       280 s~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         280 SFSELVSRISAIFST  294 (311)
T ss_dssp             CHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHh
Confidence            999999999888654

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-34  Score=266.06  Aligned_cols=165  Identities=25%  Similarity=0.418  Sum_probs=127.5

Q ss_pred             cCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       125 ~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      .+++..+..++.  ||+  .||.|||++++ +||||||+|||++.++.+||+|||+|+.......    .....||..|+
T Consensus       123 ~l~~~~~~~~~~--qia--~gl~~lH~~~i-iHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~----~~~~~gt~~y~  193 (309)
T d1fvra_         123 TLSSQQLLHFAA--DVA--RGMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYVK----KTMGRLPVRWM  193 (309)
T ss_dssp             SSCHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECGGGCEEECCTTCEESSCEECC----C----CCTTTC
T ss_pred             CCCHHHHHHHHH--HHH--HHHHhhhcCCc-cccccccceEEEcCCCceEEcccccccccccccc----ccceecCCccc
Confidence            345555556666  787  99999999999 9999999999999999999999999976533221    23446899999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCC-CCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRR-GPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      |||.+.+..+    +.++|||||||++|||++|. +||.+.+..+....+ ....++..   +..+++++.+||.+||+.
T Consensus       194 aPE~l~~~~~----~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i-~~~~~~~~---~~~~~~~~~~li~~cl~~  265 (309)
T d1fvra_         194 AIESLNYSVY----TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-PQGYRLEK---PLNCDDEVYDLMRQCWRE  265 (309)
T ss_dssp             CHHHHHHCEE----CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHG-GGTCCCCC---CTTBCHHHHHHHHHHTCS
T ss_pred             chHHhccCCC----CccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHH-HhcCCCCC---CccCCHHHHHHHHHHcCC
Confidence            9999988877    99999999999999999965 567664422222221 12223332   357899999999999999


Q ss_pred             CCCCCCChhHHHHHHHhhcccCc
Q psy16840        284 APESRPDFPTIRARLKHMKDGKQ  306 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l~~~~~~~~  306 (413)
                      ||++|||+.+|++.|+++.+..+
T Consensus       266 dP~~RPs~~eil~~L~~i~~~~~  288 (309)
T d1fvra_         266 KPYERPSFAQILVSLNRMLEERK  288 (309)
T ss_dssp             SGGGSCCHHHHHHHHHHHHHSSS
T ss_pred             ChhHCcCHHHHHHHHHHHHhcCc
Confidence            99999999999999988865544

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.98  E-value=2.8e-34  Score=260.77  Aligned_cols=167  Identities=20%  Similarity=0.287  Sum_probs=121.1

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      +...+..++.  ||+  .||+|||++|+ +||||||+|||++.++..+|+|||.+................+||+.|+||
T Consensus       109 ~~~~~~~i~~--qi~--~al~~lH~~~i-iHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aP  183 (277)
T d1o6ya_         109 TPKRAIEVIA--DAC--QALNFSHQNGI-IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP  183 (277)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCc-cCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCH
Confidence            3444445555  888  99999999999 999999999999999999999999987654443333345566899999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+..+    +.++|||||||++|||+||+.||.+.+..+...........+ .......+|+++.++|.+||+.||.
T Consensus       184 E~~~~~~~----~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~l~~li~~~L~~dp~  258 (277)
T d1o6ya_         184 EQARGDSV----DARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPE  258 (277)
T ss_dssp             HHHTTCCC----CHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC-GGGTSSSCCHHHHHHHHHHTCSSGG
T ss_pred             HHHcCCCC----CcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCC-CchhccCCCHHHHHHHHHHccCCHh
Confidence            99988776    899999999999999999999998754322211111111111 1123367899999999999999999


Q ss_pred             CCC-ChhHHHHHHHhhcc
Q psy16840        287 SRP-DFPTIRARLKHMKD  303 (413)
Q Consensus       287 ~Rp-s~~~i~~~l~~~~~  303 (413)
                      +|| |+++++..|.++.+
T Consensus       259 ~R~~sa~~l~~~l~r~~n  276 (277)
T d1o6ya_         259 NRYQTAAEMRADLVRVHN  276 (277)
T ss_dssp             GSCSSHHHHHHHHHHHHC
T ss_pred             HCHhHHHHHHHHHHHHhC
Confidence            999 89999988887654

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=6.1e-33  Score=254.81  Aligned_cols=160  Identities=21%  Similarity=0.186  Sum_probs=119.4

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      +...+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+|+......   ......+||+.|+||
T Consensus        98 ~~~~~~~~~~--qil--~aL~~lH~~~i-iHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~---~~~~~~~gt~~y~aP  169 (299)
T d1ua2a_          98 TPSHIKAYML--MTL--QGLEYLHQHWI-LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN---RAYTHQVVTRWYRAP  169 (299)
T ss_dssp             CSSHHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC---CCCCCSCCCCTTCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHhhccce-ecccCCcceEEecCCCccccccCccccccCCCc---ccccceecChhhccH
Confidence            3334455555  888  99999999999 999999999999999999999999997654322   123345789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC---------------CCCC--------CCCCCCCCcc
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEP---------------KGED--------CEEPFRPNLE  263 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~---------------~~~~--------~~~~~~~~~~  263 (413)
                      |++.+...   ++.++|||||||++|||++|..||.+.+..+.               ....        ..........
T Consensus       170 E~~~~~~~---~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (299)
T d1ua2a_         170 ELLFGARM---YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLH  246 (299)
T ss_dssp             HHHTTCSC---CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHH
T ss_pred             HHHccCCC---CChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChH
Confidence            99875532   28999999999999999999999976431110               0000        0000011112


Q ss_pred             cccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       264 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ......++++.+||.+||..||++|||++|++++
T Consensus       247 ~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         247 HIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             HHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             HhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence            2234678899999999999999999999999874

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=7.5e-34  Score=254.98  Aligned_cols=148  Identities=30%  Similarity=0.561  Sum_probs=114.9

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||+.++ +||||||+|||++.++.+||+|||+++.....      .....+|+.|+|||++.+..+    
T Consensus       111 ~i~--~al~ylH~~~i-vH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~------~~~~~~~~~y~aPE~l~~~~~----  177 (262)
T d1byga_         111 DVC--EAMEYLEGNNF-VHRDLAARNVLVSEDNVAKVSDFGLTKEASST------QDTGKLPVKWTAPEALREKKF----  177 (262)
T ss_dssp             HHH--HHHHHHHHTTC-CCSCCSGGGEEECTTSCEEECCCCC------------------CCTTTSCHHHHHHCCC----
T ss_pred             HHH--hhccccccCce-eccccchHhheecCCCCEeecccccceecCCC------CccccccccCCChHHHhCCCC----
Confidence            555  99999999999 99999999999999999999999998765322      223457889999999988776    


Q ss_pred             CccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        219 TQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      +.++|||||||++|||+| |.+||...+..+....+ ....++..   +..+++++.+||.+||+.||.+|||+.++++.
T Consensus       178 t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i-~~~~~~~~---~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         178 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-EKGYKMDA---PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH-TTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHH-HcCCCCCC---CccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            999999999999999998 78888765433322222 22333333   46788999999999999999999999999999


Q ss_pred             HHhhcc
Q psy16840        298 LKHMKD  303 (413)
Q Consensus       298 l~~~~~  303 (413)
                      |+.+..
T Consensus       254 L~~i~~  259 (262)
T d1byga_         254 LEHIKT  259 (262)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            987743

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=7.8e-34  Score=260.48  Aligned_cols=163  Identities=27%  Similarity=0.413  Sum_probs=129.3

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +.+..+..++.  ||+  .||+|||++++ |||||||+|||++.++.+||+|||+++........ .......||+.|+|
T Consensus       132 l~~~~~~~~~~--qi~--~al~ylH~~~i-vHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~a  205 (299)
T d1fgka_         132 LSSKDLVSCAY--QVA--RGMEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY-KKTTNGRLPVKWMA  205 (299)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTT-CCCTTSCCGGGGSC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHhhhCCE-EeeeecccceeecCCCCeEeccchhhccccccccc-cccccCCCChhhhh
Confidence            44445556666  787  99999999999 99999999999999999999999999876543322 22345578999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      ||.+.+..+    +.++|||||||++|||++ |..||.+.+....... .....++..   +..+++++.+||.+||+.|
T Consensus       206 PE~l~~~~y----~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~-i~~~~~~~~---p~~~~~~l~~li~~cl~~d  277 (299)
T d1fgka_         206 PEALFDRIY----THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL-LKEGHRMDK---PSNCTNELYMMMRDCWHAV  277 (299)
T ss_dssp             HHHHHHCCC----CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HHTTCCCCC---CSSCCHHHHHHHHHHTCSS
T ss_pred             hhHhcCCCC----CchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHH-HHcCCCCCC---CccchHHHHHHHHHHccCC
Confidence            999988877    999999999999999998 7888876553222111 112223322   3678999999999999999


Q ss_pred             CCCCCChhHHHHHHHhhc
Q psy16840        285 PESRPDFPTIRARLKHMK  302 (413)
Q Consensus       285 P~~Rps~~~i~~~l~~~~  302 (413)
                      |.+|||+.+|++.|+++.
T Consensus       278 P~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         278 PSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             GGGSCCHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHHh
Confidence            999999999999998764

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=6.8e-33  Score=255.35  Aligned_cols=159  Identities=20%  Similarity=0.307  Sum_probs=123.7

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +....+..++.  ||+  .||+|||++++ |||||||+|||++.++.+||+|||+++......    ......||+.|+|
T Consensus       113 ~~~~~~~~~~~--qi~--~aL~yLH~~~i-vHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~----~~~~~~gT~~Y~A  183 (305)
T d1blxa_         113 VPTETIKDMMF--QLL--RGLDFLHSHRV-VHRDLKPQNILVTSSGQIKLADFGLARIYSFQM----ALTSVVVTLWYRA  183 (305)
T ss_dssp             SCHHHHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG----GGCCCCCCCTTCC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHhCCE-EecCCCccEEEEcCCCCeeecchhhhhhhcccc----cCCCcccChhhcC
Confidence            33444455666  888  99999999999 999999999999999999999999987653222    2345689999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC----------------------CCCCCCCCCCCCcc
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEP----------------------KGEDCEEPFRPNLE  263 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~----------------------~~~~~~~~~~~~~~  263 (413)
                      ||++.+..+    +.++||||+||++|||++|+.||.+.+..+.                      ..............
T Consensus       184 PE~~~~~~y----~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
T d1blxa_         184 PEVLLQSSY----ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIE  259 (305)
T ss_dssp             HHHHTTCCC----CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGG
T ss_pred             cchhcCCCC----ChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchh
Confidence            999988877    9999999999999999999999976531110                      00001111122223


Q ss_pred             cccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        264 LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       264 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .....+++.+.+||.+||+.||++|||+.|++++
T Consensus       260 ~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         260 KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             GTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            3446788999999999999999999999999875

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.3e-33  Score=256.72  Aligned_cols=153  Identities=18%  Similarity=0.198  Sum_probs=118.0

Q ss_pred             HhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC---CeEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        131 ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS---RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       131 ~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      +..++.  ||+  .||+|||++|+ +||||||+|||++.   ++.+||+|||+|+......    .....+||+.|+|||
T Consensus       113 ~~~i~~--qi~--~al~ylH~~~i-iHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE  183 (335)
T d2ozaa1         113 ASEIMK--SIG--EAIQYLHSINI-AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN----SLTTPCYTPYYVAPE  183 (335)
T ss_dssp             HHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCC----CCCCCSCCCSSCCCC
T ss_pred             HHHHHH--HHH--HHHHHHHHcCC-ccccccccccccccccccccccccccceeeeccCCC----ccccccCCcccCCcH
Confidence            344444  777  99999999999 99999999999985   4689999999998754322    234567999999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC----CCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE----DCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      ++.+..+    +.++|||||||++|+|+||+.||.+.+.......    +.......+. .....+++++.+||.+||+.
T Consensus       184 ~~~~~~y----~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~  258 (335)
T d2ozaa1         184 VLGPEKY----DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVSEEVKMLIRNLLKT  258 (335)
T ss_dssp             CCCGGGG----SHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCT-THHHHSCHHHHHHHHHHSCS
T ss_pred             HHcCCCC----CHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCC-cccccCCHHHHHHHHHHccC
Confidence            9988877    9999999999999999999999977553332221    1111111111 11235789999999999999


Q ss_pred             CCCCCCChhHHHHH
Q psy16840        284 APESRPDFPTIRAR  297 (413)
Q Consensus       284 ~P~~Rps~~~i~~~  297 (413)
                      ||++|||+.+++++
T Consensus       259 dP~~R~s~~eil~h  272 (335)
T d2ozaa1         259 EPTQRMTITEFMNH  272 (335)
T ss_dssp             STTTSCCHHHHHHS
T ss_pred             ChhHCcCHHHHHcC
Confidence            99999999999885

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.4e-33  Score=255.50  Aligned_cols=158  Identities=18%  Similarity=0.225  Sum_probs=122.6

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe----EEEEeccccccccccccCCCcccccccCcc
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW----VLQVTDFGLHELRHCAENDSIGEHQYYRSL  201 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~----~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~  201 (413)
                      +....+..++.  ||+  .||+|||++++ +||||||+|||++.++    .+||+|||+|.......    ......||+
T Consensus       110 l~~~~~~~~~~--qi~--~al~yLH~~~i-vHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~----~~~~~~~t~  180 (293)
T d1jksa_         110 LTEEEATEFLK--QIL--NGVYYLHSLQI-AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFGTP  180 (293)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC----BCSCCCCCG
T ss_pred             cchhHHHHHHH--HHH--HHHHhhhhcce-eecccccceEEEecCCCcccceEecchhhhhhcCCCc----cccccCCCC
Confidence            34444455555  888  99999999999 9999999999998775    59999999998764322    233457899


Q ss_pred             cccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHh
Q psy16840        202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCW  281 (413)
Q Consensus       202 ~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (413)
                      .|+|||++.+..+    +.++|||||||++|||++|+.||.+.+..+....+....... ....+..+++++.+||.+||
T Consensus       181 ~y~APE~~~~~~~----~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~L  255 (293)
T d1jksa_         181 EFVAPEIVNYEPL----GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLL  255 (293)
T ss_dssp             GGCCHHHHTTCCB----CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCC-CHHHHTTSCHHHHHHHHTTS
T ss_pred             cccCHHHHcCCCC----CCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC-CchhcCCCCHHHHHHHHHHc
Confidence            9999999988776    999999999999999999999998754332222222222111 12234678999999999999


Q ss_pred             ccCCCCCCChhHHHHH
Q psy16840        282 AEAPESRPDFPTIRAR  297 (413)
Q Consensus       282 ~~~P~~Rps~~~i~~~  297 (413)
                      +.||.+|||+++++++
T Consensus       256 ~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         256 VKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             CSSGGGSCCHHHHHHS
T ss_pred             cCChhHCcCHHHHhcC
Confidence            9999999999999864

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.4e-33  Score=260.48  Aligned_cols=144  Identities=17%  Similarity=0.226  Sum_probs=116.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ |||||||+|||++.+|.+||+|||+|+......   ......+||+.|+|||++.+..+    
T Consensus       113 qil--~al~ylH~~~i-iHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~---~~~~~~~GT~~Y~aPE~~~~~~y----  182 (337)
T d1o6la_         113 EIV--SALEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKTFCGTPEYLAPEVLEDNDY----  182 (337)
T ss_dssp             HHH--HHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT---CCBCCCEECGGGCCGGGGSSSCB----
T ss_pred             HHh--hhhhhhhhcCc-cccccCHHHeEecCCCCEEEeecccccccccCC---cccccceeCHHHhhhhhccCCCC----
Confidence            888  99999999999 999999999999999999999999998653222   22345689999999999999887    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC-----hhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD-----FPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps-----~~~  293 (413)
                      +.++||||+||++|||++|+.||.+.+.......+.....     .++..+++++.+||.+||+.||.+||+     +.+
T Consensus       183 ~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~e  257 (337)
T d1o6la_         183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKE  257 (337)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHH
T ss_pred             ChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCC-----CCCccCCHHHHHHHHhhccCCchhhcccccccHHH
Confidence            9999999999999999999999987553222221111111     134678999999999999999999995     677


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++++
T Consensus       258 il~H  261 (337)
T d1o6la_         258 VMEH  261 (337)
T ss_dssp             HHTS
T ss_pred             HHcC
Confidence            7653

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.6e-33  Score=258.41  Aligned_cols=166  Identities=22%  Similarity=0.345  Sum_probs=129.8

Q ss_pred             cCChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       125 ~~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      .+++.....++.  ||+  .||+|||++++ |||||||+|||++.++.+|++|||+++....... ........||+.|+
T Consensus       141 ~l~~~~~~~~~~--qi~--~gl~~LH~~~i-vHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~-~~~~~~~~gt~~y~  214 (311)
T d1t46a_         141 ALDLEDLLSFSY--QVA--KGMAFLASKNC-IHRDLAARNILLTHGRITKICDFGLARDIKNDSN-YVVKGNARLPVKWM  214 (311)
T ss_dssp             CCCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT-SEECSSSEECGGGC
T ss_pred             CCCHHHHHHHHH--HHH--HHHHHHHhCCe-eecccccccccccccCcccccccchheeccCCCc-ceEeeecccChHHc
Confidence            455555666666  888  99999999999 9999999999999999999999999987643322 22334567899999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      |||++.+..+    +.++|||||||++|||+| |.+||.+.+.............++..   +..+++.+.+||.+||+.
T Consensus       215 aPE~~~~~~~----~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~l~~Li~~cl~~  287 (311)
T d1t46a_         215 APESIFNCVY----TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS---PEHAPAEMYDIMKTCWDA  287 (311)
T ss_dssp             CHHHHHHCCC----CHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCC---CTTSCHHHHHHHHHHTCS
T ss_pred             CHHHhcCCCC----CCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCC---cccccHHHHHHHHHHcCC
Confidence            9999988776    999999999999999999 55566554432222222223333332   256889999999999999


Q ss_pred             CCCCCCChhHHHHHHHhhcc
Q psy16840        284 APESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       284 ~P~~Rps~~~i~~~l~~~~~  303 (413)
                      ||++|||+.+|++.|+++..
T Consensus       288 dP~~RPs~~~il~~L~~~i~  307 (311)
T d1t46a_         288 DPLKRPTFKQIVQLIEKQIS  307 (311)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             ChhHCcCHHHHHHHHHHhhc
Confidence            99999999999999986543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.1e-33  Score=255.25  Aligned_cols=183  Identities=25%  Similarity=0.344  Sum_probs=129.0

Q ss_pred             hhhHhhhhhhhccCCccchhhcccccCChhhHhhhccccCCchHHhhHhhhc--------CCCcccCCCCCCCeEEcCCe
Q psy16840        100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHR--------SPIGCHGNLKSSNCVVTSRW  171 (413)
Q Consensus       100 ~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~a~gL~yLH~--------~~iiiHrdlkp~Nill~~~~  171 (413)
                      +|.++++..      .+++..++.+..+++              .||+|||+        +|+ |||||||+||||+.++
T Consensus        87 ~L~~~l~~~------~l~~~~~~~~~~~ia--------------~gl~~lH~~~~~~~~~~~I-vHrDlKp~NILl~~~~  145 (303)
T d1vjya_          87 SLFDYLNRY------TVTVEGMIKLALSTA--------------SGLAHLHMEIVGTQGKPAI-AHRDLKSKNILVKKNG  145 (303)
T ss_dssp             BHHHHHHHC------CBCHHHHHHHHHHHH--------------HHHHHHHCCBCSTTCBCEE-ECSCCCGGGEEECTTS
T ss_pred             CHHHHHhcC------CCCHHHHHHHHHHHH--------------HHHHHHHHhhhhhccCCCe-eccccCccceEEcCCC
Confidence            666666542      355555555555444              99999996        588 9999999999999999


Q ss_pred             EEEEeccccccccccccCC-CcccccccCcccccCcccccCCCCCC--CCCccchhHHHHHHHHHHHhCCCCCCCCCCCC
Q psy16840        172 VLQVTDFGLHELRHCAEND-SIGEHQYYRSLLWKAPELLRDTHAPI--RGTQKADVYAFAVILHEIIGRRGPFGGCGLYE  248 (413)
Q Consensus       172 ~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~--~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~  248 (413)
                      .+||+|||+++........ ........||+.|+|||++.+.....  .++.++|||||||++|||+||..||.......
T Consensus       146 ~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~  225 (303)
T d1vjya_         146 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ  225 (303)
T ss_dssp             CEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCC
T ss_pred             CeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccc
Confidence            9999999999876443221 12234567999999999987654211  13778999999999999999998875433222


Q ss_pred             CCCC---------------CCCCCCCCCccccc--CCChHHHHHHHHHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        249 PKGE---------------DCEEPFRPNLELLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       249 ~~~~---------------~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      ....               ......+|..+...  ...+..+.+|+.+||+.||++|||+.+|++.|+++..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  297 (303)
T d1vjya_         226 LPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             CTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            1111               11122333332221  2244679999999999999999999999999988764

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=2.2e-33  Score=262.40  Aligned_cols=151  Identities=15%  Similarity=0.147  Sum_probs=119.8

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||.|||++|+ |||||||+|||++.++.+||+|||+|+.....      .....||+.|+||
T Consensus       139 ~e~~~~~i~~--qi~--~aL~yLH~~~i-iHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~------~~~~~Gt~~Y~AP  207 (350)
T d1rdqe_         139 SEPHARFYAA--QIV--LTFEYLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWTLCGTPEALAP  207 (350)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECSSC------BCCCEECGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHhCCE-ecCcCCHHHcccCCCCCEEeeeceeeeecccc------cccccCccccCCH
Confidence            3344445555  888  99999999999 99999999999999999999999999876422      2346799999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPE  286 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~  286 (413)
                      |++.+..+    +.++|||||||++|||++|+.||.+.+.......+.....     ..+..+++++.++|.+||..||.
T Consensus       208 E~~~~~~~----~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~~li~~~L~~dP~  278 (350)
T d1rdqe_         208 EIILSKGY----NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLKDLLRNLLQVDLT  278 (350)
T ss_dssp             HHHTTCCB----CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----CCCTTCCHHHHHHHHHHSCSCTT
T ss_pred             HHHcCCCC----CccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCC-----CCCccCCHHHHHHHHHHhhhCHH
Confidence            99998877    8999999999999999999999987542222221111111     12357889999999999999999


Q ss_pred             CCC-----ChhHHHHH
Q psy16840        287 SRP-----DFPTIRAR  297 (413)
Q Consensus       287 ~Rp-----s~~~i~~~  297 (413)
                      +|+     |+++++++
T Consensus       279 kR~~~~r~t~~ell~H  294 (350)
T d1rdqe_         279 KRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             TCTTSSTTTTHHHHTS
T ss_pred             hccccccccHHHHHcC
Confidence            994     78888653

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.97  E-value=2e-33  Score=262.48  Aligned_cols=158  Identities=16%  Similarity=0.151  Sum_probs=122.6

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC--CeEEEEeccccccccccccCCCcccccccCcccc
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS--RWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      +....+..++.  ||+  .||.|||++|+ |||||||+|||++.  ++.+||+|||+|+.....    .......||+.|
T Consensus       121 l~e~~~~~i~~--qi~--~aL~ylH~~~i-iHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~----~~~~~~~gT~~Y  191 (350)
T d1koaa2         121 MSEDEAVEYMR--QVC--KGLCHMHENNY-VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK----QSVKVTTGTAEF  191 (350)
T ss_dssp             BCHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT----SCEEEECSCTTT
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHhcCC-eeeeechhHeeeccCCCCeEEEeecchheecccc----cccceecCcccc
Confidence            34444555556  888  99999999999 99999999999964  589999999999875432    223456889999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      +|||++.+..+    +.++|||||||++|+|++|..||.+.+..+....+......+. ......+++++.+||.+||+.
T Consensus       192 ~aPEv~~~~~~----~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~  266 (350)
T d1koaa2         192 AAPEVAEGKPV----GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD-DSAFSGISEDGKDFIRKLLLA  266 (350)
T ss_dssp             CCHHHHHTCCB----CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSC-CGGGGGCCHHHHHHHHHHCCS
T ss_pred             cCHHHHcCCCC----ChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-cccccCCCHHHHHHHHHHccC
Confidence            99999998877    8999999999999999999999987543222221111111111 112256889999999999999


Q ss_pred             CCCCCCChhHHHHH
Q psy16840        284 APESRPDFPTIRAR  297 (413)
Q Consensus       284 ~P~~Rps~~~i~~~  297 (413)
                      ||++|||+.+++++
T Consensus       267 dP~~R~t~~eil~h  280 (350)
T d1koaa2         267 DPNTRMTIHQALEH  280 (350)
T ss_dssp             SGGGSCCHHHHHHS
T ss_pred             ChhHCcCHHHHhcC
Confidence            99999999999875

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.1e-33  Score=256.00  Aligned_cols=164  Identities=24%  Similarity=0.406  Sum_probs=127.6

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      .+..+..++.  |++  +||.|||++++ +||||||+|||++.++++||+|||+|+....... ........||+.|+||
T Consensus       131 ~~~~~~~i~~--~ia--~gl~~LH~~~i-vHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~-~~~~~~~~~t~~y~aP  204 (308)
T d1p4oa_         131 SLSKMIQMAG--EIA--DGMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSP  204 (308)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-BCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGC-EEGGGSSEECGGGCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHHhhCCe-eeceEcCCceeecCCceEEEeecccceeccCCcc-eeeccceecccccCCH
Confidence            4444445555  777  99999999999 9999999999999999999999999987644322 2223445689999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP  285 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P  285 (413)
                      |.+.+..+    +.++||||||+++|||+|| ..||.+.+..+....+.. ..++.   .+..+++.+.++|.+||+.||
T Consensus       205 e~l~~~~~----~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~-~~~~~---~p~~~~~~l~~li~~cl~~~P  276 (308)
T d1p4oa_         205 ESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME-GGLLD---KPDNCPDMLFELMRMCWQYNP  276 (308)
T ss_dssp             HHHHHCCC----CHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHT-TCCCC---CCTTCCHHHHHHHHHHTCSSG
T ss_pred             HHHccCCC----CcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-CCCCC---CcccchHHHHHHHHHHcCCCh
Confidence            99998877    8999999999999999998 577766543222222111 22222   236788999999999999999


Q ss_pred             CCCCChhHHHHHHHhhccc
Q psy16840        286 ESRPDFPTIRARLKHMKDG  304 (413)
Q Consensus       286 ~~Rps~~~i~~~l~~~~~~  304 (413)
                      ++|||+.+|++.|++..+.
T Consensus       277 ~~RPs~~~il~~L~~~~~~  295 (308)
T d1p4oa_         277 KMRPSFLEIISSIKEEMEP  295 (308)
T ss_dssp             GGSCCHHHHHHHHGGGSCT
T ss_pred             hHCcCHHHHHHHHHHhcCC
Confidence            9999999999999877553

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=6.3e-33  Score=260.64  Aligned_cols=150  Identities=16%  Similarity=0.205  Sum_probs=116.2

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ..++.  ||+  .||+|||++|+ |||||||+|||++.++.+||+|||+|+.....     ......||+.|+|||++..
T Consensus       110 ~~~~~--qi~--~aL~ylH~~~i-iHrDlKP~NILl~~~g~iKl~DFGla~~~~~~-----~~~~~~GT~~y~APE~~~~  179 (364)
T d1omwa3         110 RFYAA--EII--LGLEHMHNRFV-VYRDLKPANILLDEHGHVRISDLGLACDFSKK-----KPHASVGTHGYMAPEVLQK  179 (364)
T ss_dssp             HHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECSSSCEEECCCTTCEECSSS-----CCCSCCSCGGGCCHHHHST
T ss_pred             HHHHH--HHH--HHHHHHHHCCc-cceeeccceeEEcCCCcEEEeeeceeeecCCC-----cccccccccccchhHHhhc
Confidence            33444  777  99999999999 99999999999999999999999999865432     2344579999999999865


Q ss_pred             C-CCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC
Q psy16840        212 T-HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD  290 (413)
Q Consensus       212 ~-~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps  290 (413)
                      . .+    +.++|||||||++|||++|+.||.+.+....... .... .......+..+++++.+||.+||+.||.+|||
T Consensus       180 ~~~~----~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~-~~~~-~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t  253 (364)
T d1omwa3         180 GVAY----DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRMT-LTMAVELPDSFSPELRSLLEGLLQRDVNRRLG  253 (364)
T ss_dssp             TCCC----CTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHH-HHHS-SSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTT
T ss_pred             CCCC----CcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhc-ccCCCCCCCCCCHHHHHHHHHHcccCHHHhCC
Confidence            4 44    8999999999999999999999987543221110 0000 01111234678999999999999999999999


Q ss_pred             -----hhHHHHH
Q psy16840        291 -----FPTIRAR  297 (413)
Q Consensus       291 -----~~~i~~~  297 (413)
                           +++++++
T Consensus       254 ~~~~~a~eil~H  265 (364)
T d1omwa3         254 CLGRGAQEVKES  265 (364)
T ss_dssp             TSSSTHHHHHTS
T ss_pred             CcccCHHHHHcC
Confidence                 6888754

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=5.3e-33  Score=256.28  Aligned_cols=141  Identities=14%  Similarity=0.201  Sum_probs=115.5

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+|+.....      ....+||+.|+|||++.+..+    
T Consensus       112 qi~--~al~~lH~~~i-iHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~------~~~~~Gt~~Y~APE~l~~~~y----  178 (316)
T d1fota_         112 EVC--LALEYLHSKDI-IYRDLKPENILLDKNGHIKITDFGFAKYVPDV------TYTLCGTPDYIAPEVVSTKPY----  178 (316)
T ss_dssp             HHH--HHHHHHHTTTE-ECCCCCGGGEEECTTSCEEECCCSSCEECSSC------BCCCCSCTTTCCHHHHTTCCB----
T ss_pred             HHH--HhhhhhccCcE-EccccCchheeEcCCCCEEEecCccceEeccc------cccccCcccccCHHHHcCCCC----
Confidence            888  99999999999 99999999999999999999999999875422      234689999999999988877    


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCC-----ChhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRP-----DFPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~  293 (413)
                      +.++|||||||++|||++|+.||.+.+..+....+.....     ..+..+++++.+++.+||..||.+||     |+++
T Consensus       179 ~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~  253 (316)
T d1fota_         179 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL-----RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTED  253 (316)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC-----CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHH
T ss_pred             CchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCC-----CCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHH
Confidence            8999999999999999999999987543222221111111     12356889999999999999999996     8888


Q ss_pred             HHHH
Q psy16840        294 IRAR  297 (413)
Q Consensus       294 i~~~  297 (413)
                      ++++
T Consensus       254 il~H  257 (316)
T d1fota_         254 VKNH  257 (316)
T ss_dssp             HHTS
T ss_pred             HHcC
Confidence            8764

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=6e-33  Score=254.90  Aligned_cols=167  Identities=13%  Similarity=0.215  Sum_probs=125.2

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC---CeEEEEeccccccccccccCCC----cccccccC
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS---RWVLQVTDFGLHELRHCAENDS----IGEHQYYR  199 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~g  199 (413)
                      ....+..++.  |++  .||+|||++|+ |||||||+|||++.   +..+||+|||+|+.........    .......|
T Consensus       101 ~~~~~~~~~~--qi~--~~l~~lH~~~i-iHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~g  175 (299)
T d1ckia_         101 SLKTVLLLAD--QMI--SRIEYIHSKNF-IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTG  175 (299)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCC
T ss_pred             cHHHHHHHHH--HHH--HHHHHHHHCCe-eeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCC
Confidence            3334444555  788  99999999999 99999999999864   4579999999998765432221    22345679


Q ss_pred             cccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC---CCCCCCCcccccCCChHHHHHH
Q psy16840        200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC---EEPFRPNLELLRDSCEPFVLAC  276 (413)
Q Consensus       200 t~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~l  276 (413)
                      |+.|+|||++.+..+    +.++|||||||++|||++|..||.............   .....++.+.....+|+++.++
T Consensus       176 t~~y~aPE~~~~~~~----~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l  251 (299)
T d1ckia_         176 TARYASINTHLGIEQ----SRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATY  251 (299)
T ss_dssp             CSSSCCHHHHTTBCC----CHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHH
T ss_pred             CccccCHHHHhCCCC----CChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHH
Confidence            999999999998877    999999999999999999999998754332222110   1111223333456789999999


Q ss_pred             HHHHhccCCCCCCChhHHHHHHHhhc
Q psy16840        277 MRDCWAEAPESRPDFPTIRARLKHMK  302 (413)
Q Consensus       277 i~~cl~~~P~~Rps~~~i~~~l~~~~  302 (413)
                      |..||+.+|++||++.++.+.|+.+.
T Consensus       252 i~~cl~~~p~~RP~~~~i~~~l~~~~  277 (299)
T d1ckia_         252 LNFCRSLRFDDKPDYSYLRQLFRNLF  277 (299)
T ss_dssp             HHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHccCChhHCcCHHHHHHHHHHHH
Confidence            99999999999999999988887653

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=2.3e-32  Score=249.32  Aligned_cols=160  Identities=14%  Similarity=0.208  Sum_probs=116.6

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      +...+..++.  ||+  .||+|||++++ |||||||+|||++.++.+||+|||+|.......   .......|++.|+||
T Consensus        98 ~~~~~~~i~~--qi~--~~L~~LH~~~I-vHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~---~~~~~~~~~~~y~~p  169 (286)
T d1ob3a_          98 ESVTAKSFLL--QLL--NGIAYCHDRRV-LHRDLKPQNLLINREGELKIADFGLARAFGIPV---RKYTHEIVTLWYRAP  169 (286)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEECTTSCEEECCTTHHHHHCC------------CCCTTCCH
T ss_pred             chhhhHHHHH--HHH--HHHHHhccCcE-EecCCCCceeeEcCCCCEEecccccceecccCc---cccceecccchhhhH
Confidence            3444445555  888  99999999999 999999999999999999999999998754322   123344689999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC----------------C--------CCCCCCCCCCCc
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEP----------------K--------GEDCEEPFRPNL  262 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~----------------~--------~~~~~~~~~~~~  262 (413)
                      |.+.+...   ++.++|||||||++|||++|+.||.+.+..+.                .        ............
T Consensus       170 E~~~~~~~---~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T d1ob3a_         170 DVLMGSKK---YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPW  246 (286)
T ss_dssp             HHHTTCCS---CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCG
T ss_pred             HHHhCCCC---CCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcch
Confidence            99876543   28999999999999999999999975431100                0        000001111112


Q ss_pred             ccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ......+++++.+|+.+||..||++|||+.|++++
T Consensus       247 ~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H  281 (286)
T d1ob3a_         247 ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (286)
T ss_dssp             GGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            23345688999999999999999999999999753

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.97  E-value=2.7e-33  Score=261.80  Aligned_cols=158  Identities=17%  Similarity=0.202  Sum_probs=123.3

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEc--CCeEEEEeccccccccccccCCCcccccccCcccc
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVT--SRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~--~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      ++...+..++.  ||+  .||+|||++|+ +||||||+|||++  .++.+||+|||+|+......    ......||+.|
T Consensus       124 l~e~~~~~i~~--qi~--~aL~ylH~~~i-iHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~----~~~~~~gt~~y  194 (352)
T d1koba_         124 MSEAEVINYMR--QAC--EGLKHMHEHSI-VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE----IVKVTTATAEF  194 (352)
T ss_dssp             BCHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS----CEEEECSSGGG
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCe-eecccccccccccccCCCeEEEeecccceecCCCC----ceeeccCcccc
Confidence            44444555666  888  99999999999 9999999999998  56899999999998764321    23445789999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      +|||++.+..+    +.++|||||||++|+|++|..||.+.+.......+......+. ......+++++.+||.+||+.
T Consensus       195 ~aPE~~~~~~~----~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~  269 (352)
T d1koba_         195 AAPEIVDREPV----GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD-EDAFSSVSPEAKDFIKNLLQK  269 (352)
T ss_dssp             CCHHHHTTCCB----CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCC-SSTTTTSCHHHHHHHHTTSCS
T ss_pred             cCHHHHcCCCC----CCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-cccccCCCHHHHHHHHHHccC
Confidence            99999998877    9999999999999999999999987543222211111111111 112357899999999999999


Q ss_pred             CCCCCCChhHHHHH
Q psy16840        284 APESRPDFPTIRAR  297 (413)
Q Consensus       284 ~P~~Rps~~~i~~~  297 (413)
                      ||.+|||+.+++++
T Consensus       270 dp~~R~s~~eil~H  283 (352)
T d1koba_         270 EPRKRLTVHDALEH  283 (352)
T ss_dssp             SGGGSCCHHHHHTS
T ss_pred             ChhHCcCHHHHhcC
Confidence            99999999999875

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.3e-33  Score=251.53  Aligned_cols=148  Identities=18%  Similarity=0.274  Sum_probs=117.6

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-eEEEEeccccccccccccCCCcccccccCccccc
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      ++...+..++.  ||+  .||+|||++|+ +||||||+|||++.+ +.+||+|||+|+.....     ......||+.|+
T Consensus       107 l~e~~~~~~~~--qi~--~al~~lH~~~i-iHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~-----~~~~~~GT~~y~  176 (273)
T d1xwsa_         107 LQEELARSFFW--QVL--EAVRHCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYS  176 (273)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEEETTTTEEEECCCTTCEECCSS-----CBCCCCSCGGGS
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHCCC-ccccCcccceEEecCCCeEEECccccceecccc-----cccccccCCCcC
Confidence            44444555666  888  99999999999 999999999999854 79999999999765322     233567999999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccC
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA  284 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  284 (413)
                      |||++.+..+.   +.++|||||||++|||++|+.||.+....      ....     ..++..+|+++.+||.+||+.|
T Consensus       177 aPE~~~~~~~~---~~~~DiwSlGvilyell~g~~Pf~~~~~i------~~~~-----~~~~~~~s~~~~~li~~~L~~d  242 (273)
T d1xwsa_         177 PPEWIRYHRYH---GRSAAVWSLGILLYDMVCGDIPFEHDEEI------IRGQ-----VFFRQRVSSECQHLIRWCLALR  242 (273)
T ss_dssp             CHHHHHHSCBC---HHHHHHHHHHHHHHHHHHSSCSCCSHHHH------HHCC-----CCCSSCCCHHHHHHHHHHTCSS
T ss_pred             CHHHHcCCCCC---CcccccccceeeehhHhhCCCCCCCchHH------hhcc-----cCCCCCCCHHHHHHHHHHccCC
Confidence            99999876541   67899999999999999999999753210      0000     1123568899999999999999


Q ss_pred             CCCCCChhHHHHH
Q psy16840        285 PESRPDFPTIRAR  297 (413)
Q Consensus       285 P~~Rps~~~i~~~  297 (413)
                      |++|||+++++++
T Consensus       243 p~~R~s~~eil~h  255 (273)
T d1xwsa_         243 PSDRPTFEEIQNH  255 (273)
T ss_dssp             GGGSCCHHHHHTS
T ss_pred             HhHCcCHHHHhcC
Confidence            9999999999875

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.5e-32  Score=257.17  Aligned_cols=163  Identities=19%  Similarity=0.310  Sum_probs=124.1

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||+|||++|+ |||||||+|||++.++.+||+|||+|+...............+||+.|+||
T Consensus       107 ~~~~i~~i~~--qil--~al~yLH~~~i-iHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aP  181 (345)
T d1pmea_         107 SNDHICYFLY--QIL--RGLKYIHSANV-LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP  181 (345)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCG
T ss_pred             CHHHHHHHHH--HHH--HHHHHHHHCCC-cCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechH
Confidence            3444555666  888  99999999999 999999999999999999999999998765544433334556799999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--------------------------CCCCCCCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--------------------------EDCEEPFRP  260 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--------------------------~~~~~~~~~  260 (413)
                      |++.....   ++.++||||+||++|+|++|..||.+.+......                          .........
T Consensus       182 E~l~~~~~---~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (345)
T d1pmea_         182 EIMLNSKG---YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV  258 (345)
T ss_dssp             GGTTTBCS---CSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCC
T ss_pred             HHhhcCCC---CCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCC
Confidence            99865543   2889999999999999999999997643110000                          001111112


Q ss_pred             CcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       261 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ......+.+++++.+|+.+||..||.+|||+.+++++
T Consensus       259 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         259 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             CHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            2223345678899999999999999999999999875

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.97  E-value=1.8e-32  Score=248.01  Aligned_cols=162  Identities=16%  Similarity=0.132  Sum_probs=122.5

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +.......++.  ||+  .||+|||++|+ +||||||+|||++.++.+||+|||+++......    ......||+.|+|
T Consensus       107 l~e~~~~~~~~--qi~--~al~~lH~~~i-vHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y~~  177 (277)
T d1phka_         107 LSEKETRKIMR--ALL--EVICALHKLNI-VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE----KLREVCGTPSYLA  177 (277)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCCTTCEECCTTC----CBCCCCSCGGGCC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHcCC-cccccccceEEEcCCCCeEEccchheeEccCCC----ceeeeeccCCCCC
Confidence            34444455555  888  99999999999 999999999999999999999999998764322    2344679999999


Q ss_pred             cccccCCCC--CCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        206 PELLRDTHA--PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       206 PE~~~~~~~--~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      ||.+.+...  ...++.++||||+||++|+|++|+.||.+.+.......+......+..+ ....+|+++.+|+.+||+.
T Consensus       178 PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~~L~~  256 (277)
T d1phka_         178 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP-EWDDYSDTVKDLVSRFLVV  256 (277)
T ss_dssp             HHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT-TGGGSCHHHHHHHHHHCCS
T ss_pred             HHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCc-ccccCCHHHHHHHHHHccC
Confidence            999874321  1234889999999999999999999998765322222222222221111 1246899999999999999


Q ss_pred             CCCCCCChhHHHHH
Q psy16840        284 APESRPDFPTIRAR  297 (413)
Q Consensus       284 ~P~~Rps~~~i~~~  297 (413)
                      ||.+|||+++++++
T Consensus       257 ~p~~R~s~~eil~h  270 (277)
T d1phka_         257 QPQKRYTAEEALAH  270 (277)
T ss_dssp             SGGGSCCHHHHTTS
T ss_pred             ChhHCcCHHHHHcC
Confidence            99999999998764

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.1e-31  Score=244.19  Aligned_cols=161  Identities=18%  Similarity=0.255  Sum_probs=120.6

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      +....+..++.  ||+  .||+|||++|+ |||||||+|||++.++.+||+|||+|+......   .......||+.|+|
T Consensus        99 l~e~~~~~~~~--qil--~~L~yLH~~~I-iHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~---~~~~~~~gt~~y~a  170 (298)
T d1gz8a_          99 IPLPLIKSYLF--QLL--QGLAFCHSHRV-LHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVTLWYRA  170 (298)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS---BCTTCCBCCCTTCC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHhhcCCE-EccccCchheeecccCcceeccCCcceeccCCc---ccceeecccceeee
Confidence            34444555555  888  99999999999 999999999999999999999999998754322   22344578999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC-----------CC----C---------CCCCCCCCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEP-----------KG----E---------DCEEPFRPN  261 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~-----------~~----~---------~~~~~~~~~  261 (413)
                      ||++....+   ++.++||||+||++|+|++|+.||.+.+....           ..    .         .........
T Consensus       171 pE~~~~~~~---~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (298)
T d1gz8a_         171 PEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD  247 (298)
T ss_dssp             HHHHTTCSS---CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCC
T ss_pred             hhhhccccC---CCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccc
Confidence            999877654   28899999999999999999999976431110           00    0         000011111


Q ss_pred             cccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .......+++++.+|+.+||..||++|||+.|++++
T Consensus       248 ~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             HHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            112224678899999999999999999999999875

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.1e-31  Score=246.53  Aligned_cols=160  Identities=21%  Similarity=0.274  Sum_probs=118.9

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCe-EEEEeccccccccccccCCCcccccccCccccc
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW-VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK  204 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  204 (413)
                      +.+..+..++.  ||+  .||+|||++|| +||||||+|||++.++ .+||+|||+++......    ......||+.|+
T Consensus       119 l~~~~~~~i~~--qil--~aL~yLH~~~I-iHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y~  189 (350)
T d1q5ka_         119 LPVIYVKLYMY--QLF--RSLAYIHSFGI-CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYR  189 (350)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHTTTE-ECCCCCGGGEEECTTTCCEEECCCTTCEECCTTS----CCCSCCSCTTSC
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHhcCC-cccCCCcceEEEecCCCceeEecccchhhccCCc----cccccccccccc
Confidence            44444555666  888  99999999999 9999999999999774 89999999988654322    233457899999


Q ss_pred             CcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCC-----------------------C-CCCCCCCCC
Q psy16840        205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK-----------------------G-EDCEEPFRP  260 (413)
Q Consensus       205 aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-----------------------~-~~~~~~~~~  260 (413)
                      |||.+.+...   ++.++||||+||++|||++|..||...+..+..                       . ........+
T Consensus       190 aPE~~~~~~~---~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (350)
T d1q5ka_         190 APELIFGATD---YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP  266 (350)
T ss_dssp             CHHHHTTCSS---CCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCC
T ss_pred             ChHHhhcccC---CCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCc
Confidence            9998876432   299999999999999999999999764311100                       0 000000111


Q ss_pred             CcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       261 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .........++++.+|+.+||..||++|||+.|++++
T Consensus       267 ~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  303 (350)
T d1q5ka_         267 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  303 (350)
T ss_dssp             GGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            1112234678999999999999999999999999864

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-32  Score=252.77  Aligned_cols=148  Identities=22%  Similarity=0.322  Sum_probs=118.1

Q ss_pred             hhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccC
Q psy16840        132 TYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRD  211 (413)
Q Consensus       132 ~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (413)
                      ..++.  ||+  .||+|||++++ +||||||+|||+++++.+||+|||+++......   .......||+.|+|||++.+
T Consensus       106 ~~~~~--qi~--~al~ylH~~~i-iHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~  177 (320)
T d1xjda_         106 TFYAA--EII--LGLQFLHSKGI-VYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---AKTNTFCGTPDYIAPEILLG  177 (320)
T ss_dssp             HHHHH--HHH--HHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---CCBCCCCSCGGGCCHHHHTT
T ss_pred             HHHHH--HHH--HHHHHHHhCCe-eeccCcccceeecCCCceeccccchhhhccccc---ccccccCCCCCcCCHHHHcC
Confidence            34444  777  99999999999 999999999999999999999999998653222   22345679999999999998


Q ss_pred             CCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCCh
Q psy16840        212 THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF  291 (413)
Q Consensus       212 ~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~  291 (413)
                      ..+    +.++|||||||++|||++|+.||.+.+.......+...  .+   .++..+++++.+||.+||..||.+|||+
T Consensus       178 ~~~----~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~--~~---~~p~~~s~~~~dli~~~L~~dP~~R~s~  248 (320)
T d1xjda_         178 QKY----NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD--NP---FYPRWLEKEAKDLLVKLFVREPEKRLGV  248 (320)
T ss_dssp             CCB----CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CC---CCCTTSCHHHHHHHHHHSCSSGGGSBTT
T ss_pred             CCC----CchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CC---CCCccCCHHHHHHHHHhcccCCCCCcCH
Confidence            877    89999999999999999999999875532222111111  11   2235789999999999999999999999


Q ss_pred             h-HHHH
Q psy16840        292 P-TIRA  296 (413)
Q Consensus       292 ~-~i~~  296 (413)
                      . ++++
T Consensus       249 ~~~l~~  254 (320)
T d1xjda_         249 RGDIRQ  254 (320)
T ss_dssp             BSCGGG
T ss_pred             HHHHHh
Confidence            5 6754

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.97  E-value=4.4e-32  Score=247.99  Aligned_cols=165  Identities=12%  Similarity=0.145  Sum_probs=125.4

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcC-----CeEEEEeccccccccccccCC----CcccccccCc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS-----RWVLQVTDFGLHELRHCAEND----SIGEHQYYRS  200 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~-----~~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~gt  200 (413)
                      ....++.  |++  .||+|||++|+ +||||||+|||++.     ++.+||+|||+|+........    ........||
T Consensus       102 ~~~~i~~--q~~--~~l~~lH~~gi-iHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT  176 (293)
T d1csna_         102 TVAMAAK--QML--ARVQSIHEKSL-VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT  176 (293)
T ss_dssp             HHHHHHH--HHH--HHHHHHHTTTE-ECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSC
T ss_pred             HHHHHHH--HHH--HHHHHHHHCCc-eeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEc
Confidence            3344555  777  99999999999 99999999999974     578999999999876433221    1223456799


Q ss_pred             ccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC---CCCCCCCCCcccccCCChHHHHHHH
Q psy16840        201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE---DCEEPFRPNLELLRDSCEPFVLACM  277 (413)
Q Consensus       201 ~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li  277 (413)
                      +.|+|||++.+..+    +.++|||||||++|||++|..||.+.........   .......+....+...+|+++.+++
T Consensus       177 ~~y~aPE~~~~~~~----~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii  252 (293)
T d1csna_         177 ARYMSINTHLGREQ----SRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYM  252 (293)
T ss_dssp             TTTCCHHHHTTCCC----CHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHH
T ss_pred             hhhcCHHHhcCCCC----ChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHH
Confidence            99999999998876    9999999999999999999999976442221110   0001111223334467899999999


Q ss_pred             HHHhccCCCCCCChhHHHHHHHhhcc
Q psy16840        278 RDCWAEAPESRPDFPTIRARLKHMKD  303 (413)
Q Consensus       278 ~~cl~~~P~~Rps~~~i~~~l~~~~~  303 (413)
                      ..||+.+|++||+++.+.+.|+.+..
T Consensus       253 ~~~~~~~~~~rP~y~~l~~~l~~~~~  278 (293)
T d1csna_         253 HYARNLAFDATPDYDYLQGLFSKVLE  278 (293)
T ss_dssp             HHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHhcCCcccCcCHHHHHHHHHHHHH
Confidence            99999999999999999888776643

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.4e-31  Score=247.41  Aligned_cols=150  Identities=17%  Similarity=0.273  Sum_probs=115.0

Q ss_pred             CCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccccCCCCCCCC
Q psy16840        139 DGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRG  218 (413)
Q Consensus       139 ~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (413)
                      ||+  .||.|||++++ +||||||+|||++.++.+||+|||+++........  ......|++.|+|||.+.+...  .+
T Consensus       137 Qi~--~al~~lH~~~i-vHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~~~--~~  209 (322)
T d1vzoa_         137 EIV--LALEHLHKLGI-IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE--RAYDFCGTIEYMAPDIVRGGDS--GH  209 (322)
T ss_dssp             HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGG--GGCGGGSCCTTCCHHHHTTCC-----
T ss_pred             HHH--HHHHHhhcCCE-EeccCCccceeecCCCCEEEeeccchhhhcccccc--cccccccccccchhHHhhcCCc--CC
Confidence            888  99999999999 99999999999999999999999999866433222  2345678999999999976543  23


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhccCCCCCCC-----hhH
Q psy16840        219 TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD-----FPT  293 (413)
Q Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps-----~~~  293 (413)
                      +.++|||||||++|+|++|..||.+.+..............+ ....+..+++++.+||.+||+.||.+|||     ++|
T Consensus       210 ~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~e  288 (322)
T d1vzoa_         210 DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADE  288 (322)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHH
T ss_pred             CchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccC-CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHH
Confidence            889999999999999999999998765333222111111111 11123578999999999999999999995     677


Q ss_pred             HHH
Q psy16840        294 IRA  296 (413)
Q Consensus       294 i~~  296 (413)
                      +++
T Consensus       289 il~  291 (322)
T d1vzoa_         289 IKE  291 (322)
T ss_dssp             HHT
T ss_pred             HHc
Confidence            764

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.8e-31  Score=246.72  Aligned_cols=158  Identities=12%  Similarity=0.140  Sum_probs=122.4

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC--eEEEEeccccccccccccCCCcccccccCcccc
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR--WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW  203 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~--~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  203 (413)
                      ++...+..++.  ||+  .||+|||++|+ +||||||+|||++.+  +.+||+|||+++.....    .......||+.|
T Consensus        99 l~e~~~~~i~~--qi~--~al~yLH~~~i-iHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~----~~~~~~~~t~~y  169 (321)
T d1tkia_          99 LNEREIVSYVH--QVC--EALQFLHSHNI-GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG----DNFRLLFTAPEY  169 (321)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT----CEEEEEESCGGG
T ss_pred             CCHHHHHHHHH--HHH--HHHHHHHHcCC-CcccccccceeecCCCceEEEEcccchhhccccC----Cccccccccccc
Confidence            34444555666  888  99999999999 999999999999854  58999999998765322    123445789999


Q ss_pred             cCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCChHHHHHHHHHHhcc
Q psy16840        204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE  283 (413)
Q Consensus       204 ~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (413)
                      +|||.+.+..+    +.++||||+||++|+|++|..||.+.+.......+......+. ......+++++.+||.+||..
T Consensus       170 ~ape~~~~~~~----~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~  244 (321)
T d1tkia_         170 YAPEVHQHDVV----STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD-EEAFKEISIEAMDFVDRLLVK  244 (321)
T ss_dssp             SCHHHHTTCEE----CHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC-HHHHTTSCHHHHHHHHTTSCS
T ss_pred             ccchhccCCCC----CchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-hhhccCCCHHHHHHHHHHccC
Confidence            99999988877    9999999999999999999999987543222222222222221 122356899999999999999


Q ss_pred             CCCCCCChhHHHHH
Q psy16840        284 APESRPDFPTIRAR  297 (413)
Q Consensus       284 ~P~~Rps~~~i~~~  297 (413)
                      ||.+|||+.+++++
T Consensus       245 dp~~R~s~~eil~h  258 (321)
T d1tkia_         245 ERKSRMTASEALQH  258 (321)
T ss_dssp             SGGGSCCHHHHHHS
T ss_pred             ChhHCcCHHHHhcC
Confidence            99999999999875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.7e-30  Score=243.38  Aligned_cols=158  Identities=20%  Similarity=0.313  Sum_probs=121.8

Q ss_pred             CChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccC
Q psy16840        126 SDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKA  205 (413)
Q Consensus       126 ~~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  205 (413)
                      ++...+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+|++|||+|+.....      .....||+.|+|
T Consensus       118 l~~~~~~~~~~--qi~--~aL~~LH~~~I-iHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~------~~~~~~t~~y~a  186 (346)
T d1cm8a_         118 LGEDRIQFLVY--QML--KGLRYIHAAGI-IHRDLKPGNLAVNEDCELKILDFGLARQADSE------MTGYVVTRWYRA  186 (346)
T ss_dssp             CCHHHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEECCSS------CCSSCSCGGGCC
T ss_pred             ccHHHHHHHHH--HHH--HHHHHHHhCCC-cccccCcchhhcccccccccccccceeccCCc------cccccccccccC
Confidence            44445556666  888  99999999999 99999999999999999999999999765322      234578999999


Q ss_pred             cccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--------------------------CCCCCCCC
Q psy16840        206 PELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--------------------------EDCEEPFR  259 (413)
Q Consensus       206 PE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--------------------------~~~~~~~~  259 (413)
                      ||++.+...   ++.++||||+||++|+|++|..||.+.+......                          ........
T Consensus       187 PE~~~~~~~---~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (346)
T d1cm8a_         187 PEVILNWMR---YTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEK  263 (346)
T ss_dssp             THHHHTTTC---CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCC
T ss_pred             HHHHcCCCC---CCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccc
Confidence            999876543   2899999999999999999999997643111000                          00011111


Q ss_pred             CCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       260 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .........+++++.+||.+||..||.+|||+.+++++
T Consensus       264 ~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         264 KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  301 (346)
T ss_dssp             CCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            22233345678999999999999999999999999876

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.4e-31  Score=242.99  Aligned_cols=163  Identities=21%  Similarity=0.248  Sum_probs=116.4

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCC-CcccccccCcccccCcc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE  207 (413)
                      ..+..++.  ||+  .||.|||++|+ +||||||+|||++.++.+||+|||+++........ .......+||+.|+|||
T Consensus       117 ~~~~~i~~--qil--~~l~~lH~~~i-vHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE  191 (318)
T d3blha1         117 SEIKRVMQ--MLL--NGLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPE  191 (318)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTE-ECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHH
T ss_pred             HHHHHHHH--HHH--HHHHHhccCCE-EecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHH
Confidence            33445555  888  99999999999 99999999999999999999999999765433221 12233457999999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC---------------CCCCC--------CCC--CCCCc
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEP---------------KGEDC--------EEP--FRPNL  262 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~---------------~~~~~--------~~~--~~~~~  262 (413)
                      ++.+...   ++.++||||+||++|||++|+.||.+......               .....        ...  .....
T Consensus       192 ~~~~~~~---~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (318)
T d3blha1         192 LLLGERD---YGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKV  268 (318)
T ss_dssp             HHTTCSS---CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCH
T ss_pred             HHcCCCC---CCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccc
Confidence            9876532   28999999999999999999999975331100               00000        000  00000


Q ss_pred             c-cc-cCCChHHHHHHHHHHhccCCCCCCChhHHHHHHH
Q psy16840        263 E-LL-RDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK  299 (413)
Q Consensus       263 ~-~~-~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l~  299 (413)
                      . .+ ....++++.+||.+||..||++|||++|++++-.
T Consensus       269 ~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpf  307 (318)
T d3blha1         269 KDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF  307 (318)
T ss_dssp             HHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             hhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChh
Confidence            0 00 0124667889999999999999999999987643

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.2e-29  Score=227.19  Aligned_cols=157  Identities=15%  Similarity=0.162  Sum_probs=116.0

Q ss_pred             hHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCcccc
Q psy16840        130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL  209 (413)
Q Consensus       130 ~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  209 (413)
                      .+..++.  |++  .||+|||++|+ +||||||+|||++.++.+||+|||.|+.......   ......+++.|+|||++
T Consensus       102 ~~~~~~~--q~~--~aL~~lH~~~I-vHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~---~~~~~~~~~~~~~pe~~  173 (292)
T d1unla_         102 IVKSFLF--QLL--KGLGFCHSRNV-LHRDLKPQNLLINRNGELKLANFGLARAFGIPVR---CYSAEVVTLWYRPPDVL  173 (292)
T ss_dssp             HHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS---CCCSCCSCGGGCCHHHH
T ss_pred             HHHHHHH--HHH--HHHHHhhcCCE-eeecccCcccccccCCceeeeecchhhcccCCCc---cceeeccccchhhhhHh
Confidence            3444555  888  99999999999 9999999999999999999999999987643221   22334567889999998


Q ss_pred             cCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC----------------C---------CCCCCCCCCCCCccc
Q psy16840        210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE----------------P---------KGEDCEEPFRPNLEL  264 (413)
Q Consensus       210 ~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~----------------~---------~~~~~~~~~~~~~~~  264 (413)
                      .+...   ++.++||||+||++|||++|..||.......                .         ...............
T Consensus       174 ~~~~~---~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (292)
T d1unla_         174 FGAKL---YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVN  250 (292)
T ss_dssp             TTCSC---CCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTT
T ss_pred             ccCCC---CCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhh
Confidence            77653   2899999999999999999999864322100                0         000000111112222


Q ss_pred             ccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        265 LRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      .....++.+.+|+.+||+.||.+|||++|++++
T Consensus       251 ~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         251 VVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            335678899999999999999999999999764

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.95  E-value=6.2e-29  Score=230.91  Aligned_cols=157  Identities=20%  Similarity=0.218  Sum_probs=116.0

Q ss_pred             hhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCC-eEEEEeccccccccccccCCCcccccccCcccccCcc
Q psy16840        129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE  207 (413)
Q Consensus       129 ~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  207 (413)
                      .-+..++.  ||+  .||+|||++|+ +||||||+|||++.+ +.+||+|||+|+......    ......+|+.|+|||
T Consensus       129 ~~i~~i~~--qil--~aL~~LH~~gI-vHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~----~~~~~~~t~~y~aPE  199 (328)
T d3bqca1         129 YDIRFYMY--EIL--KALDYCHSMGI-MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPE  199 (328)
T ss_dssp             HHHHHHHH--HHH--HHHHHHHHTTE-ECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC----CCCSCCSCGGGCCHH
T ss_pred             HHHHHHHH--HHH--HHHHHHhhccc-ccccccccceEEcCCCCeeeecccccceeccCCC----cccccccCccccCcc
Confidence            33445555  899  99999999999 999999999999865 579999999998654322    234557899999999


Q ss_pred             cccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC-------------------------C---CCCCCCCCCC
Q psy16840        208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE-------------------------P---KGEDCEEPFR  259 (413)
Q Consensus       208 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~-------------------------~---~~~~~~~~~~  259 (413)
                      .+.+...   ++.++||||+||++|++++|..||.......                         .   ..........
T Consensus       200 ~~~~~~~---~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (328)
T d3bqca1         200 LLVDYQM---YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSR  276 (328)
T ss_dssp             HHTTCCC---CCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCC
T ss_pred             cccCCCC---CCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccc
Confidence            9877542   2899999999999999999999996533110                         0   0000000111


Q ss_pred             CCc-----ccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        260 PNL-----ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       260 ~~~-----~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ...     ......+++++.+||.+||..||.+|||++|++++
T Consensus       277 ~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H  319 (328)
T d3bqca1         277 KRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  319 (328)
T ss_dssp             CCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            111     11123578899999999999999999999999874

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.6e-29  Score=237.20  Aligned_cols=159  Identities=20%  Similarity=0.259  Sum_probs=110.9

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+|++|||+++......    ......||+.|+||
T Consensus       117 ~~~~i~~~~~--qil--~gl~~LH~~gi-iHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~----~~~~~~~t~~y~aP  187 (355)
T d2b1pa1         117 DHERMSYLLY--QML--CGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----MMTPYVVTRYYRAP  187 (355)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCSCCCGGGEEECTTCCEEECCCCC-------------------CCTTCCH
T ss_pred             CHHHHHHHHH--HHH--HHHHHhhhccc-ccccCCccccccccccceeeechhhhhcccccc----ccccccccccccCh
Confidence            3334445555  888  99999999999 999999999999999999999999987654322    23455789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--------------------------CCCCC----
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--------------------------EDCEE----  256 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--------------------------~~~~~----  256 (413)
                      |++.+..+    +.++||||+||++|+|++|+.||.+.+......                          .....    
T Consensus       188 E~l~~~~~----~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (355)
T d2b1pa1         188 EVILGMGY----KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT  263 (355)
T ss_dssp             HHHTTCCC----CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCC
T ss_pred             hhhcCCCC----CCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccc
Confidence            99988776    899999999999999999999997643111000                          00000    


Q ss_pred             -------CCCCCcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHHH
Q psy16840        257 -------PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL  298 (413)
Q Consensus       257 -------~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~l  298 (413)
                             ...+.........++++.+||.+||..||++|||++|++++-
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hp  312 (355)
T d2b1pa1         264 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP  312 (355)
T ss_dssp             HHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred             cccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCc
Confidence                   000000011123567899999999999999999999998763

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.7e-29  Score=232.66  Aligned_cols=157  Identities=19%  Similarity=0.299  Sum_probs=115.6

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEeccccccccccccCCCcccccccCcccccCc
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAP  206 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  206 (413)
                      ....+..++.  ||+  .||+|||++|+ +||||||+|||++.++.+|++|||++.....      ......||+.|+||
T Consensus       119 ~e~~~~~i~~--qil--~aL~~LH~~gi-iHrDiKp~NILi~~~~~~kl~dfg~a~~~~~------~~~~~~g~~~y~ap  187 (348)
T d2gfsa1         119 TDDHVQFLIY--QIL--RGLKYIHSADI-IHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAP  187 (348)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECCC----CCTG------GGSSSCHHHHTSCH
T ss_pred             cHHHHHHHHH--HHH--HHHHHHHhCCC-cccccCCccccccccccccccccchhcccCc------ccccccccccccCc
Confidence            3344455566  888  99999999999 9999999999999999999999999865432      23345789999999


Q ss_pred             ccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC--------------------------CCCCCCCCC
Q psy16840        207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG--------------------------EDCEEPFRP  260 (413)
Q Consensus       207 E~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--------------------------~~~~~~~~~  260 (413)
                      |.+.+..+   ++.++|||||||++|+|++|..||.+.+......                          .........
T Consensus       188 E~~~~~~~---~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (348)
T d2gfsa1         188 EIMLNWMH---YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM  264 (348)
T ss_dssp             HHHTTCSC---CCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCC
T ss_pred             hhhcCCcc---CCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCc
Confidence            98776543   2889999999999999999999997643111000                          000111111


Q ss_pred             CcccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       261 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                      ........+++++.+||.+||..||.+|||+.|++++
T Consensus       265 ~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H  301 (348)
T d2gfsa1         265 NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  301 (348)
T ss_dssp             CHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             chhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence            2222234678999999999999999999999999874

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=3.2e-27  Score=222.34  Aligned_cols=156  Identities=15%  Similarity=0.145  Sum_probs=112.5

Q ss_pred             ChhhHhhhccccCCchHHhhHhhhc-CCCcccCCCCCCCeEEcCCe------EEEEeccccccccccccCCCcccccccC
Q psy16840        127 DIIIITYLMNFGDGIPRQGMTFLHR-SPIGCHGNLKSSNCVVTSRW------VLQVTDFGLHELRHCAENDSIGEHQYYR  199 (413)
Q Consensus       127 ~~~~~~~~~~~~~i~~a~gL~yLH~-~~iiiHrdlkp~Nill~~~~------~~kl~Dfg~a~~~~~~~~~~~~~~~~~g  199 (413)
                      ....+..++.  ||+  .||+|||+ .|| +||||||+|||++.++      .+|++|||.+.....      ......|
T Consensus       123 ~~~~i~~i~~--qil--~al~~lh~~~~I-vHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~------~~~~~~g  191 (362)
T d1q8ya_         123 PLIYVKQISK--QLL--LGLDYMHRRCGI-IHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE------HYTNSIQ  191 (362)
T ss_dssp             CHHHHHHHHH--HHH--HHHHHHHHTTCE-ECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB------CCCSCCS
T ss_pred             cHHHHHHHHH--HHH--HHHHHHhhhcCc-ccccCChhHeeeeccCcccccceeeEeeccccccccc------ccccccc
Confidence            3344556666  888  99999997 888 9999999999998654      599999999875432      1234578


Q ss_pred             cccccCcccccCCCCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCCC----------------------------
Q psy16840        200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG----------------------------  251 (413)
Q Consensus       200 t~~y~aPE~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~----------------------------  251 (413)
                      |+.|+|||++.+..+    +.++||||+||++++|++|+.||..........                            
T Consensus       192 t~~y~aPE~~~~~~~----~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  267 (362)
T d1q8ya_         192 TREYRSPEVLLGAPW----GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRT  267 (362)
T ss_dssp             CGGGCCHHHHHTCCC----CTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHH
T ss_pred             cccccChhhccccCC----CccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhccccccc
Confidence            999999999998776    899999999999999999999997543111000                            


Q ss_pred             --------CCCCCCCCCCc-------ccccCCChHHHHHHHHHHhccCCCCCCChhHHHHH
Q psy16840        252 --------EDCEEPFRPNL-------ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR  297 (413)
Q Consensus       252 --------~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~i~~~  297 (413)
                              ...........       .......++++.+|+.+||..||.+|||++|++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H  328 (362)
T d1q8ya_         268 FFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  328 (362)
T ss_dssp             HBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             ccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                    00000000000       00112356789999999999999999999999875

>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase IIC1, domain C2a
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.46  E-value=1.9e-14  Score=121.83  Aligned_cols=63  Identities=41%  Similarity=0.734  Sum_probs=59.4

Q ss_pred             CCcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcceeEEEEEe
Q psy16840          1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWLV   64 (413)
Q Consensus         1 ~p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~~~~~~l~   64 (413)
                      +|+||+|||+||+|+|||+.+.|++|+||++||..|.+. +|.++++|.+.+||+|++.+||+.
T Consensus       136 ~~~y~v~Gd~VN~AaRle~~a~~g~I~vS~~t~~~l~~~-~~~~~~~g~i~vKGkg~~~ty~l~  198 (199)
T d1azsb_         136 KPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTL-GYTCTCRGIINVKGKGDLKTYFVN  198 (199)
T ss_dssp             SCEEEEESHHHHHHHHHHHTCCTTEEEEEHHHHHHHHHT-TCCEEEEEEEEETTTEEEEEEEEC
T ss_pred             cccccccchHHHHHHHHHhcCCCCeEEECHHHHHHHhcC-CeEEEEeCCEEecCCCeEEEEEEe
Confidence            478999999999999999999999999999999999874 499999999999999999999984

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.22  E-value=3.2e-13  Score=113.72  Aligned_cols=46  Identities=17%  Similarity=0.221  Sum_probs=39.8

Q ss_pred             hhccccCCchHHhhHhhhcCCCcccCCCCCCCeEEcCCeEEEEecccccccc
Q psy16840        133 YLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR  184 (413)
Q Consensus       133 ~~~~~~~i~~a~gL~yLH~~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~~~  184 (413)
                      .++.  |++  .||+|||++|+ +||||||+|||+++++ ++|+|||+|...
T Consensus       107 ~i~~--ql~--~~l~~lH~~gi-iHrDiKP~NILv~~~~-~~liDFG~a~~~  152 (191)
T d1zara2         107 EVLD--MIL--EEVAKFYHRGI-VHGDLSQYNVLVSEEG-IWIIDFPQSVEV  152 (191)
T ss_dssp             HHHH--HHH--HHHHHHHHTTE-ECSCCSTTSEEEETTE-EEECCCTTCEET
T ss_pred             HHHH--HHH--HHHHHHhhCCE-EEccCChhheeeeCCC-EEEEECCCcccC
Confidence            4444  777  99999999999 9999999999999765 889999998654

>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylate cyclase CyaC
species: Spirulina platensis [TaxId: 118562]

Probab=98.90  E-value=2.4e-10  Score=96.20  Aligned_cols=59  Identities=20%  Similarity=0.302  Sum_probs=52.6

Q ss_pred             CcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceeecceEeecCcceeEEEEE
Q psy16840          2 PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWL   63 (413)
Q Consensus         2 p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~~g~v~~kg~g~~~~~~l   63 (413)
                      ++|++|||+||+|+|||+.+.|++|.+|+++++.+.+   +.+...|.+.+||+++....|.
T Consensus       133 ~~y~~~G~~Vn~AaRle~~a~~~~Ilise~~~~~l~~---~~~~~~~~~~lKG~~~pv~~y~  191 (197)
T d1wc1a_         133 SDFTAIGPSVNIAARLQEATAPNSIMVSAMVAQYVPD---EEIIKREFLELKGIDEPVMTCV  191 (197)
T ss_dssp             EEEEEESHHHHHHHHHHHHSCTTCEEEEHHHHTTSCG---GGEEEEEEECCTTCSSCEEEEE
T ss_pred             ccccccccHHHHHHHHHhcCCCCEEEEeHHHHHhcCC---CeeEEecCEEeCCCCcEEEEEE
Confidence            6799999999999999999999999999999999976   6678899999999998655444

>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase {Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Receptor-type monomeric adenylyl cyclase
species: Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]

Probab=98.81  E-value=1.1e-09  Score=94.59  Aligned_cols=63  Identities=22%  Similarity=0.293  Sum_probs=54.7

Q ss_pred             CcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhcc--CCcceeecceEeecCcceeEEEEEe
Q psy16840          2 PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKL--GGYIVEERGVVCMKGKGEVLTYWLV   64 (413)
Q Consensus         2 p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~--~~~~~~~~g~v~~kg~g~~~~~~l~   64 (413)
                      .||++||++||+|+|||+.+.||+|.||++++..+...  ..|.+...|.+.+||+++....|.+
T Consensus       152 ~~~~~~G~~Vn~AaRles~a~~g~IliS~~~~~~l~~~~~~~~~~~~lg~~~lKG~~~p~~vy~v  216 (235)
T d1fx2a_         152 KGYDYYGRTPNMAARTESVANGGQVLMTHAAYMSLSAEDRKQIDVTALGDVALRGVSDPVKMYQL  216 (235)
T ss_dssp             SSEEEESHHHHHHHHHHHTCCTTCEEEEHHHHHTSCHHHHHTCCEEEEEEECCTTCSSCEEEEEE
T ss_pred             eeeeeecHHHHHHHHHHhccCCCeEEECHHHHHHHhhhhcCceEEEEeceEEecCCCCCEEEEEE
Confidence            58999999999999999999999999999999998642  3589999999999999876544444

>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis familiaris) [TaxId: 9615]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase VC1, domain C1a
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=98.78  E-value=2e-10  Score=95.90  Aligned_cols=61  Identities=28%  Similarity=0.327  Sum_probs=51.2

Q ss_pred             CCcccccCchhhhhhhhhhcCCCCceeccHHHHHHHhccCCcceee--cceEeecCcce-eEEEEE
Q psy16840          1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEE--RGVVCMKGKGE-VLTYWL   63 (413)
Q Consensus         1 ~p~y~~~G~~vn~a~r~e~~~~~~~i~~s~~~~~~l~~~~~~~~~~--~g~v~~kg~g~-~~~~~l   63 (413)
                      +|+||+|||+||+|+||++.+.|++|++|+++|++|...  |.+++  .|...++|+.+ +.+|.+
T Consensus       126 ~~~~~~~G~~Vn~Aarl~~~a~~~~ilvS~~~~~~l~~~--~~~~~~~~g~~~~~gk~~~i~~y~v  189 (190)
T d1azsa_         126 KWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLNGD--YEVEPGCGGERNAYLKEHSIETFLI  189 (190)
T ss_dssp             SCCCEEESHHHHHHHHHHHTCCTTSEEECSTTTTTTTTC--SCEEECCGGGTCHHHHHTTCCCEEE
T ss_pred             ccccceeccceehHHHHhccCCCCEEEECHHHHHHhccC--ceEEEccCcEEEEecccCceEEEEE
Confidence            489999999999999999999999999999999999875  55554  77788888744 445554

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.98  E-value=0.017  Score=50.43  Aligned_cols=30  Identities=17%  Similarity=0.179  Sum_probs=26.6

Q ss_pred             CCCcccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        152 SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       152 ~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      .|+ ||+|+.+.||+++++...-|.||+.+.
T Consensus       183 ~gi-IHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGV-IHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EEE-ECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccc-ccCCcchhhhhcccccceeEecccccc
Confidence            567 999999999999999888899999863

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.09  E-value=0.04  Score=46.31  Aligned_cols=28  Identities=32%  Similarity=0.364  Sum_probs=24.6

Q ss_pred             ccCCCCCCCeEEcCCeEEEEeccccccc
Q psy16840        156 CHGNLKSSNCVVTSRWVLQVTDFGLHEL  183 (413)
Q Consensus       156 iHrdlkp~Nill~~~~~~kl~Dfg~a~~  183 (413)
                      +|+|+.|.|||+++++.+-|.||+.+..
T Consensus       186 ~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         186 SHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             ECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEeeccCcceeecCCceEEEeechhccc
Confidence            8999999999999887778999998643

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=91.46  E-value=0.039  Score=46.08  Aligned_cols=28  Identities=21%  Similarity=0.161  Sum_probs=24.7

Q ss_pred             cccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        155 GCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       155 iiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      ++|+|+.|.|||++++..+-|+||+.+.
T Consensus       177 liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         177 VTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EEeCCCCCcceEEeCCceEEEEEchhcc
Confidence            3999999999999988778899999764

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=87.25  E-value=0.11  Score=46.55  Aligned_cols=28  Identities=18%  Similarity=0.258  Sum_probs=23.9

Q ss_pred             CCcccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       153 ~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      .+ +|||+.|.|||++++. ++|.||..+.
T Consensus       224 ~L-iHGDl~~gNIlv~~~~-~~vID~E~a~  251 (392)
T d2pula1         224 TL-IHGDLHTGSIFASEHE-TKVIDPEFAF  251 (392)
T ss_dssp             EE-ECSCCCGGGEEECSSC-EEECCCTTCE
T ss_pred             ce-eccCCcCCceeEcCCc-eEEechhhcc
Confidence            35 9999999999999774 7999998764

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=84.89  E-value=0.17  Score=43.93  Aligned_cols=28  Identities=14%  Similarity=0.111  Sum_probs=22.5

Q ss_pred             CCCcccCCCCCCCeEEcCCeEEEEecccccc
Q psy16840        152 SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHE  182 (413)
Q Consensus       152 ~~iiiHrdlkp~Nill~~~~~~kl~Dfg~a~  182 (413)
                      .++ ||+|+.|.|||++++ . .+.||+-+.
T Consensus       192 ~~l-iHgDlh~~NvL~~~~-~-~~IDFdd~~  219 (325)
T d1zyla1         192 VLR-LHGDCHAGNILWRDG-P-MFVDLDDAR  219 (325)
T ss_dssp             CEE-CCSSCSGGGEEESSS-E-EECCCTTCC
T ss_pred             cee-ecCCCCcccEEEeCC-c-eEEechhcc
Confidence            345 999999999999865 3 478999864