Psyllid ID: psy17476

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510---
Protein Sequence
MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD
Secondary Structure (PSIPRED)
cccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccEEEEEEcccccEEEEEcccccccccccccEEEcccccccccccccccHHHHHHHHHHccccccccccccccHHEEEEEccccccccccccHHHHHcEEccccccccccccccHHHHHHHHHHHccccccccEEEccccccccEEEcccccccccccccccccccccccccccHHHccccccccccccccEEEEEccccccEEEEEEEccccccEEEEEEEEcccccEEEEcccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEEcccccccEEEEEEcccEEEEEEccccccHHHHHHHHHHHHcccccccEEEEEEEcccccEEEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHcHEEEEEccccccccEEEEEEEccccccccccEEccccEEEEEcccccccEEEEcccccccccccccccEEEEEEEcccccccccccccccEEEEEEcccccEEEEEcccccEEEEEHHHEcccccccccccHHHcccccccHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcccccccccccccccccccccEEEEEEcccccHHHHHHccccccccccEEEEcccccccccccccccHHccccHHHHHHHHHcccccccEEEEEEccccccEEEEEEccccccEEEEEEEEEcccccEEEEcccccccHHHHHHHHHccccccHHEcccEEccccccccccccccccEccHHHEEEEEEEEEcccEEEEEEEEcccEEEEEEccccccHHHHHHHHHHHHccccccEccEEEEEcccccEEEEEEccccccccccc
Coil and Loop (DISEMBL)
MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIhretkkslypsslneisfilwpdqmirpKVVVALypfkaieggdlslekgaeyevmddTQEHWWKVkdkngirkpdqmirpKVVVALypfkaieggdlslekgaeyevmdDTQEHWWKVkdkngsvgyipsnyvKEKELlglqkyddvngLTLELIHQVLNYtrfssksdvWAYGVLMWEVFtcgkmpygrlkntevVDRVQRGiilekpkawyvgdmsRQRAESILKqedkegcfvvrnsstkglyTLSLytkvphphvkhyhikqnsrgefflsekhcchsipevkdkegcfvvrnsstkglyTLSLytkvphphvkhyhikqnsrgefflsekhcchsipevvnyhrhnsgglasrlktspcdrpvpataglshdkweidPAELMLLEelgsgqfgvvrrgkwrgsIDVAmmkegtmsedDFIEEAKVMTRLQHQNLVQLYGvcskhrpiyivtdtssfrlgllad
Flexible Loop (DISEMBL)
mrhgsllnYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRetkkslypssLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWwkvkdkngirkpdqmirPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVkdkngsvgyiPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGiilekpkawyvgdmSRQRAESilkqedkegcfvvrnsstkgLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSipevkdkegcfVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEElgsgqfgvvrrgkwrGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGvcskhrpiyivtdtssfrlgllad
Low Complexity Region (SEG)
MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD
Disordered region (IsUnstruct)
*****LLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMS******IL***DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGG*****************AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGL***
Disordered Region (DISOPRED)
*RHGSLLNYLRRH*****GNVGLLLDMCIQVCKGMAYLERHNY*****************************KVVVALYPF*********************************************VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLA*
Disordered Region (DISEMBL)
MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD
Disordered Region (DISPRO)
***GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFR******
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	513	2.2.26 [Sep-21-2011]
P08630	786	Tyrosine-protein kinase B	yes	N/A	0.397	0.259	0.735	4e-85
Q06187	659	Tyrosine-protein kinase B	yes	N/A	0.329	0.256	0.551	8e-51
P35991	659	Tyrosine-protein kinase B	yes	N/A	0.329	0.256	0.545	2e-50
P24604	630	Tyrosine-protein kinase T	no	N/A	0.335	0.273	0.541	3e-49
P42680	631	Tyrosine-protein kinase T	no	N/A	0.333	0.270	0.538	1e-48
Q8JH64	657	Tyrosine-protein kinase B	no	N/A	0.329	0.257	0.531	4e-48
P42681	527	Tyrosine-protein kinase T	no	N/A	0.333	0.324	0.505	4e-47
P42682	527	Tyrosine-protein kinase T	no	N/A	0.329	0.320	0.505	1e-46
P51813	675	Cytoplasmic tyrosine-prot	no	N/A	0.333	0.253	0.505	5e-45
P97504	651	Cytoplasmic tyrosine-prot	no	N/A	0.333	0.262	0.494	4e-44

>sp|P08630|BTKL_DROME Tyrosine-protein kinase Btk29A OS=Drosophila melanogaster GN=Btk29A PE=2 SV=2

 Score =  315 bits (808), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 153/208 (73%), Positives = 175/208 (84%), Gaps = 4/208 (1%)

Query: 299 VPHPHVKHYHIKQNSRGEFFLSE--KHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTK 356
           +P  +VK   +    R E+++ +  +    S+ +  DKEGCFVVR SSTKGLYTLSL+TK
Sbjct: 392 IPSNYVKPKALLGLERYEWYVGDMSRQRAESLLKQGDKEGCFVVRKSSTKGLYTLSLHTK 451

Query: 357 VPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPAT 416
           VP  HVKHYHIKQN+R E++LSEKHCC +IP+++NYHRHNSGGLA RLK+SPCDRPVP T
Sbjct: 452 VPQSHVKHYHIKQNARCEYYLSEKHCCETIPDLINYHRHNSGGLACRLKSSPCDRPVPPT 511

Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAK 474
           AGLSHDKWEI P ELML+EELGSGQFGVVRRGKWRGSID A  MMKEGTMSEDDFIEEAK
Sbjct: 512 AGLSHDKWEIHPMELMLMEELGSGQFGVVRRGKWRGSIDTAVKMMKEGTMSEDDFIEEAK 571

Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           VMT+LQH NLVQLYGVCSKHRPIYIVT+
Sbjct: 572 VMTKLQHPNLVQLYGVCSKHRPIYIVTE 599

Required for proper ring canal development. Also required for the development of male genitalia and for adult survival.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 0EC: .EC: 2

>sp|Q06187|BTK_HUMAN Tyrosine-protein kinase BTK OS=Homo sapiens GN=BTK PE=1 SV=3

 Score =  201 bits (512), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 97/176 (55%), Positives = 130/176 (73%), Gaps = 7/176 (3%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
           KEG F+VR+SS  G YT+S++ K    P   ++HY +    + +++L+EKH   +IPE++
Sbjct: 300 KEGGFIVRDSSKAGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPELI 359

Query: 391 NYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG 448
           NYH+HNS GL SRLK   S  ++  P+TAGL +  WEIDP +L  L+ELG+GQFGVV+ G
Sbjct: 360 NYHQHNSAGLISRLKYPVSQQNKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYG 419

Query: 449 KWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           KWRG  DVA  M+KEG+MSED+FIEEAKVM  L H+ LVQLYGVC+K RPI+I+T+
Sbjct: 420 KWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 475

Non-receptor tyrosine kinase indispensable for B lymphocyte development, differentiation and signaling. Binding of antigen to the B-cell antigen receptor (BCR) triggers signaling that ultimately leads to B-cell activation. After BCR engagement and activation at the plasma membrane, phosphorylates PLCG2 at several sites, igniting the downstream signaling pathway through calcium mobilization, followed by activation of the protein kinase C (PKC) family members. PLCG2 phosphorylation is performed in close cooperation with the adapter protein B-cell linker protein BLNK. BTK acts as a platform to bring together a diverse array of signaling proteins and is implicated in cytokine receptor signaling pathways. Plays an important role in the function of immune cells of innate as well as adaptive immunity, as a component of the Toll-like receptors (TLR) pathway. The TLR pathway acts as a primary surveillance system for the detection of pathogens and are crucial to the activation of host defense. Especially, is a critical molecule in regulating TLR9 activation in splenic B-cells. Within the TLR pathway, induces tyrosine phosphorylation of TIRAP which leads to TIRAP degradation. BTK plays also a critical role in transcription regulation. Induces the activity of NF-kappa-B, which is involved in regulating the expression of hundreds of genes. BTK is involved on the signaling pathway linking TLR8 and TLR9 to NF-kappa-B. Transiently phosphorylates transcription factor GTF2I on tyrosine residues in response to BCR. GTF2I then translocates to the nucleus to bind regulatory enhancer elements to modulate gene expression. ARID3A and NFAT are other transcriptional target of BTK. BTK is required for the formation of functional ARID3A DNA-binding complexes. There is however no evidence that BTK itself binds directly to DNA. BTK has a dual role in the regulation of apoptosis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P35991|BTK_MOUSE Tyrosine-protein kinase BTK OS=Mus musculus GN=Btk PE=1 SV=4

 Score =  201 bits (510), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 96/176 (54%), Positives = 130/176 (73%), Gaps = 7/176 (3%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
           KEG F+VR+SS  G YT+S++ K    P   ++HY +    + +++L+EKH   +IPE++
Sbjct: 300 KEGGFIVRDSSKAGKYTVSVFAKSTGEPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPELI 359

Query: 391 NYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG 448
           NYH+HNS GL SRLK   S  ++  P+TAGL +  WEIDP +L  L+ELG+GQFGVV+ G
Sbjct: 360 NYHQHNSAGLISRLKYPVSKQNKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYG 419

Query: 449 KWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           KWRG  DVA  M++EG+MSED+FIEEAKVM  L H+ LVQLYGVC+K RPI+I+T+
Sbjct: 420 KWRGQYDVAIKMIREGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 475

Non-receptor tyrosine kinase indispensable for B lymphocyte development, differentiation and signaling. Binding of antigen to the B-cell antigen receptor (BCR) triggers signaling that ultimately leads to B-cell activation. After BCR engagement and activation at the plasma membrane, phosphorylates PLCG2 at several sites, igniting the downstream signaling pathway through calcium mobilization, followed by activation of the protein kinase C (PKC) family members. PLCG2 phosphorylation is performed in close cooperation with the adapter protein B-cell linker protein BLNK. BTK acts as a platform to bring together a diverse array of signaling proteins and is implicated in cytokine receptor signaling pathways. Plays an important role in the function of immune cells of innate as well as adaptive immunity, as a component of the Toll-like receptors (TLR) pathway. The TLR pathway acts as a primary surveillance system for the detection of pathogens and are crucial to the activation of host defense. Especially, is a critical molecule in regulating TLR9 activation in splenic B-cells. Within the TLR pathway, induces tyrosine phosphorylation of TIRAP which leads to TIRAP degradation. BTK plays also a critical role in transcription regulation. Induces the activity of NF-kappa-B, which is involved in regulating the expression of hundreds of genes. BTK is involved on the signaling pathway linking TLR8 and TLR9 to NF-kappa-B. Transiently phosphorylates transcription factor GTF2I on tyrosine residues in response to BCR. GTF2I then translocates to the nucleus to bind regulatory enhancer elements to modulate gene expression. ARID3A and NFAT are other transcriptional target of BTK. BTK is required for the formation of functional ARID3A DNA-binding complexes. There is however no evidence that BTK itself binds directly to DNA. BTK has a dual role in the regulation of apoptosis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P24604|TEC_MOUSE Tyrosine-protein kinase Tec OS=Mus musculus GN=Tec PE=1 SV=2

 Score =  196 bits (498), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 98/181 (54%), Positives = 129/181 (71%), Gaps = 9/181 (4%)

Query: 331 VKDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNSRG--EFFLSEKHCCHS 385
            +DKEG F+VR+SS  GLYT+SLYTK         +HYHIK+ +    +++L+EKH   S
Sbjct: 262 TEDKEGGFMVRDSSQPGLYTVSLYTKFGGEGSSGFRHYHIKETATSPKKYYLAEKHAFGS 321

Query: 386 IPEVVNYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFG 443
           IPE++ YH+HN+ GL +RL+   S   +  P TAG S+DKWEI+P+EL  + ELGSG FG
Sbjct: 322 IPEIIEYHKHNAAGLVTRLRYPVSTKGKNAPTTAGFSYDKWEINPSELTFMRELGSGLFG 381

Query: 444 VVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           VVR GKWR    VA+  ++EG M E+DFIEEAKVM +L H  LVQLYGVC++ +PIYIVT
Sbjct: 382 VVRLGKWRAQYKVAIKAIREGAMCEEDFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVT 441

Query: 502 D 502
           +
Sbjct: 442 E 442

Non-receptor tyrosine kinase that contributes to signaling from many receptors and participates as a signal transducer in multiple downstream pathways, including regulation of the actin cytoskekleton. Plays a redundant role to ITK in regulation of the adaptive immune response. Regulates the development, function and differentiation of conventional T-cells and nonconventional NKT-cells. Required for TCR-dependent IL2 gene induction. Phosphorylates DOK1, one CD28-specific substrate, and contributes to CD28-signaling. Mediates signals that negatively regulate IL2RA expression induced by TCR cross-linking. Plays a redundant role to BTK in BCR-signaling for B-cell development and activation, especially by phosphorylating STAP1, a BCR-signaling protein. Required in mast cells for efficient cytokine production. Involved in both growth and differentiation mechanisms of myeloid cells through activation by the granulocyte colony-stimulating factor CSF3, a critical cytokine to promoting the growth, differentiation, and functional activation of myeloid cells. Participates in platelet signaling downstream of integrin activation. Cooperates with JAK2 through reciprocal phosphorylation to mediate cytokine-driven activation of FOS transcription. GRB10, a negative modifier of the FOS activation pathway, is another substrate of TEC. TEC is involved in G protein-coupled receptor- and integrin-mediated signalings in blood platelets. Plays a role in hepatocyte proliferation and liver regeneration and is involved in HGF-induced ERK signaling pathway. TEC regulates also FGF2 unconventional secretion (endoplasmic reticulum (ER)/Golgi-independent mechanism) under various physiological conditions through phosphorylation of FGF2 'Tyr-82'. May also be involved in the regulation of osteoclast differentiation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P42680|TEC_HUMAN Tyrosine-protein kinase Tec OS=Homo sapiens GN=TEC PE=1 SV=2

 Score =  194 bits (494), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 97/180 (53%), Positives = 129/180 (71%), Gaps = 9/180 (5%)

Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNSRG--EFFLSEKHCCHSI 386
           +DKEG F+VR+SS  GLYT+SLYTK         +HYHIK+ +    +++L+EKH   SI
Sbjct: 264 EDKEGGFMVRDSSQPGLYTVSLYTKFGGEGSSGFRHYHIKETTTSPKKYYLAEKHAFGSI 323

Query: 387 PEVVNYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGV 444
           PE++ YH+HN+ GL +RL+   S   +  P TAG S++KWEI+P+EL  + ELGSG FGV
Sbjct: 324 PEIIEYHKHNAAGLVTRLRYPVSVKGKNAPTTAGFSYEKWEINPSELTFMRELGSGLFGV 383

Query: 445 VRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           VR GKWR    VA+  ++EG M E+DFIEEAKVM +L H  LVQLYGVC++ +PIYIVT+
Sbjct: 384 VRLGKWRAQYKVAIKAIREGAMCEEDFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTE 443

Non-receptor tyrosine kinase that contributes to signaling from many receptors and participates as a signal transducer in multiple downstream pathways, including regulation of the actin cytoskekleton. Plays a redundant role to ITK in regulation of the adaptive immune response. Regulates the development, function and differentiation of conventional T-cells and nonconventional NKT-cells. Required for TCR-dependent IL2 gene induction. Phosphorylates DOK1, one CD28-specific substrate, and contributes to CD28-signaling. Mediates signals that negatively regulate IL2RA expression induced by TCR cross-linking. Plays a redundant role to BTK in BCR-signaling for B-cell development and activation, especially by phosphorylating STAP1, a BCR-signaling protein. Required in mast cells for efficient cytokine production. Involved in both growth and differentiation mechanisms of myeloid cells through activation by the granulocyte colony-stimulating factor CSF3, a critical cytokine to promoting the growth, differentiation, and functional activation of myeloid cells. Participates in platelet signaling downstream of integrin activation. Cooperates with JAK2 through reciprocal phosphorylation to mediate cytokine-driven activation of FOS transcription. GRB10, a negative modifier of the FOS activation pathway, is another substrate of TEC. TEC is involved in G protein-coupled receptor- and integrin-mediated signalings in blood platelets. Plays a role in hepatocyte proliferation and liver regeneration and is involved in HGF-induced ERK signaling pathway. TEC regulates also FGF2 unconventional secretion (endoplasmic reticulum (ER)/Golgi-independent mechanism) under various physiological conditions through phosphorylation of FGF2 'Tyr-215'. May also be involved in the regulation of osteoclast differentiation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q8JH64|BTK_CHICK Tyrosine-protein kinase BTK OS=Gallus gallus GN=BTK PE=1 SV=1

 Score =  192 bits (489), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 94/177 (53%), Positives = 131/177 (74%), Gaps = 8/177 (4%)

Query: 334 KEGCFVVRNSSTK-GLYTLSLYTKV---PHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV 389
           KEG F+VR+S++K G YT+S+Y K    P   ++HY +    + +++L+EKH  ++IPE+
Sbjct: 297 KEGGFIVRDSTSKTGKYTVSVYAKSAVDPQGMIRHYVVCCTPQNQYYLAEKHLFNTIPEL 356

Query: 390 VNYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRR 447
           + YH+HNS GL SRLK   S   +  P+TAGL +  WEIDP +L  L+ELG+GQFGVV+ 
Sbjct: 357 ITYHQHNSAGLISRLKYPVSRHQKSAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKY 416

Query: 448 GKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           GKWRG  +VA  M++EG+MSED+FI+EAKVM  L H+ LVQLYGVC+K RPI+I+T+
Sbjct: 417 GKWRGQYNVAIKMIREGSMSEDEFIDEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 473

Non-receptor tyrosine kinase indispensable for B lymphocyte development, differentiation and signaling. Binding of antigen to the B-cell antigen receptor (BCR) triggers signaling that ultimately leads to B-cell activation. After BCR engagement and activation at the plasma membrane, phosphorylates PLCG2 at several sites, igniting the downstream signaling pathway through calcium mobilization, followed by activation of the protein kinase C (PKC) family members. PLCG2 phosphorylation is performed in close cooperation with the adapter protein B-cell linker protein BLNK. BTK acts as a platform to bring together a diverse array of signaling proteins and is implicated in cytokine receptor signaling pathways. Plays an important role in the function of immune cells of innate as well as adaptive immunity, as a component of the Toll-like receptors (TLR) pathway. The TLR pathway acts as a primary surveillance system for the detection of pathogens and are crucial to the activation of host defense. Especially, is a critical molecule in regulating TLR9 activation in splenic B-cells. Within the TLR pathway, induces tyrosine phosphorylation of TIRAP which leads to TIRAP degradation. BTK plays also a critical role in transcription regulation. Induces the activity of NF-kappa-B, which is involved in regulating the expression of hundreds of genes. BTK is involved on the signaling pathway linking TLR8 and TLR9 to NF-kappa-B. Transiently phosphorylates transcription factor GTF2I on tyrosine residues in response to BCR. GTF2I then translocates to the nucleus to bind regulatory enhancer elements to modulate gene expression. ARID3A and NFAT are other transcriptional target of BTK. BTK is required for the formation of functional ARID3A DNA-binding complexes. There is however no evidence that BTK itself binds directly to DNA. BTK has a dual role in the regulation of apoptosis.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P42681|TXK_HUMAN Tyrosine-protein kinase TXK OS=Homo sapiens GN=TXK PE=1 SV=3

 Score =  189 bits (480), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 90/178 (50%), Positives = 128/178 (71%), Gaps = 7/178 (3%)

Query: 332 KDKEGCFVVRNSSTKGLYTLSLYT---KVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           + KEG F+VR+S   G YT+S++    +     +KHY IK+N  G+++++E+H   SIPE
Sbjct: 167 ESKEGAFIVRDSRHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHAFQSIPE 226

Query: 389 VVNYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVR 446
           ++ YH+HN+ GL +RL+         +PATAG S++KWEIDP+EL  ++E+GSGQFGVV 
Sbjct: 227 LIWYHQHNAAGLMTRLRYPVGLMGSCLPATAGFSYEKWEIDPSELAFIKEIGSGQFGVVH 286

Query: 447 RGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
            G+WR  I VA+  + EG+MSE+DFIEEAKVM +L H  LVQLYGVC + +P+YIVT+
Sbjct: 287 LGEWRSHIQVAIKAINEGSMSEEDFIEEAKVMMKLSHSKLVQLYGVCIQRKPLYIVTE 344

Non-receptor tyrosine kinase that plays a redundant role with ITK in regulation of the adaptive immune response. Regulates the development, function and differentiation of conventional T-cells and nonconventional NKT-cells. When antigen presenting cells (APC) activate T-cell receptor (TCR), a series of phosphorylation lead to the recruitment of TXK to the cell membrane, where it is phosphorylated at Tyr-420. Phosphorylation leads to TXK full activation. Contributes also to signaling from many receptors and participates in multiple downstream pathways, including regulation of the actin cytoskekleton. Like ITK, can phosphorylate PLCG1, leading to its localization in lipid rafts and activation, followed by subsequent cleavage of its substrates. In turn, the endoplasmic reticulum releases calcium in the cytoplasm and the nuclear activator of activated T-cells (NFAT) translocates into the nucleus to perform its transcriptional duty. With PARP1 and EEF1A1, TXK forms a complex that acts as a T-helper 1 (Th1) cell-specific transcription factor and binds the promoter of IFNG to directly regulate its transcription, and is thus involved importantly in Th1 cytokine production. Phosphorylates both PARP1 and EEF1A1. Phosphorylates also key sites in LCP2 leading to the up-regulation of Th1 preferred cytokine IL-2. Phosphorylates 'Tyr-201' of CTLA4 which leads to the association of PI-3 kinase with the CTLA4 receptor.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P42682|TXK_MOUSE Tyrosine-protein kinase TXK OS=Mus musculus GN=Txk PE=1 SV=1

 Score =  188 bits (477), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 89/176 (50%), Positives = 128/176 (72%), Gaps = 7/176 (3%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
           KEG F+VR+S   G YT+S++T+        +KHY IK+N  G+++++E+H   S+PE++
Sbjct: 169 KEGAFIVRDSRHLGSYTISVFTRARRHTQSSIKHYQIKKNDSGQWYITERHLFPSVPELI 228

Query: 391 NYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG 448
            YH++N+ GL SRL+         +PAT+G S++KWEIDP+EL  ++E+GSGQFGVV  G
Sbjct: 229 QYHQYNAAGLISRLRYPIGLLGSCLPATSGFSYEKWEIDPSELAFVKEIGSGQFGVVHLG 288

Query: 449 KWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +WR  I VA+  + EG+MSE+DFIEEAKVM +L H  LVQLYGVC + +P+YIVT+
Sbjct: 289 EWRAHIPVAIKAINEGSMSEEDFIEEAKVMMKLSHSRLVQLYGVCIQQKPLYIVTE 344

Non-receptor tyrosine kinase that plays a redundant role with ITK in regulation of the adaptive immune response. Regulates the development, function and differentiation of conventional T-cells and nonconventional NKT-cells. When antigen presenting cells (APC) activate T-cell receptor (TCR), a series of phosphorylation lead to the recruitment of TXK to the cell membrane, where it is phosphorylated at Tyr-420. Phosphorylation leads to TXK full activation. Contributes also to signaling from many receptors and participates in multiple downstream pathways, including regulation of the actin cytoskekleton. Like ITK, can phosphorylate PLCG1, leading to its localization in lipid rafts and activation, followed by subsequent cleavage of its substrates. In turn, the endoplasmic reticulum releases calcium in the cytoplasm and the nuclear activator of activated T-cells (NFAT) translocates into the nucleus to perform its transcriptional duty. With PARP1 and EEF1A1, TXK forms a complex that acts as a T-helper 1 (Th1) cell-specific transcription factor and binds the promoter of IFNG to directly regulate its transcription, and is thus involved importantly in Th1 cytokine production. Phosphorylates both PARP1 and EEF1A1. Phosphorylates also key sites in LCP2 leading to the up-regulation of Th1 preferred cytokine IL-2. Phosphorylates 'Tyr-201' of CTLA4 which leads to the association of PI-3 kinase with the CTLA4 receptor.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P51813|BMX_HUMAN Cytoplasmic tyrosine-protein kinase BMX OS=Homo sapiens GN=BMX PE=1 SV=1

 Score =  182 bits (463), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 90/178 (50%), Positives = 125/178 (70%), Gaps = 7/178 (3%)

Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVPHPH---VKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           K KEG F+VRNSS  G+YT+SL++K  +     VKHYH+  N+  + +L+E +C  SIP+
Sbjct: 313 KGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPK 372

Query: 389 VVNYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVR 446
           +++YH+HNS G+ +RL+   S     VP +  L +  WE+   E+ LL+ELGSGQFGVV+
Sbjct: 373 LIHYHQHNSAGMITRLRHPVSTKANKVPDSVSLGNGIWELKREEITLLKELGSGQFGVVQ 432

Query: 447 RGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
            GKW+G  DVA  M+KEG+MSED+F +EA+ M +L H  LV+ YGVCSK  PIYIVT+
Sbjct: 433 LGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 490

Non-receptor tyrosine kinase that plays central but diverse modulatory roles in various signaling processes involved in the regulation of actin reorganization, cell migration, cell proliferation and survival, cell adhesion, and apoptosis. Participates in signal transduction stimulated by growth factor receptors, cytokine receptors, G-protein coupled receptors, antigen receptors and integrins. Induces tyrosine phosphorylation of BCAR1 in response to integrin regulation. Activation of BMX by integrins is mediated by PTK2/FAK1, a key mediator of integrin signaling events leading to the regulation of actin cytoskeleton and cell motility. Plays a critical role in TNF-induced angiogenesis, and implicated in the signaling of TEK and FLT1 receptors, 2 important receptor families essential for angiogenesis. Required for the phosphorylation and activation of STAT3, a transcription factor involved in cell differentiation. Also involved in interleukin-6 (IL6) induced differentiation. Plays also a role in programming adaptive cytoprotection against extracellular stress in different cell systems, salivary epithelial cells, brain endothelial cells, and dermal fibroblasts. May be involved in regulation of endocytosis through its interaction with an endosomal protein RUFY1. May also play a role in the growth and differentiation of hematopoietic cells; as well as in signal transduction in endocardial and arterial endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P97504|BMX_MOUSE Cytoplasmic tyrosine-protein kinase BMX OS=Mus musculus GN=Bmx PE=2 SV=1

 Score =  179 bits (455), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 88/178 (49%), Positives = 123/178 (69%), Gaps = 7/178 (3%)

Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVPHPH---VKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           K KEG F+VRNSS  G+YT+SL++K  +     VKHYH+  N+  + +L+E +C  SIP+
Sbjct: 289 KGKEGAFMVRNSSQMGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPK 348

Query: 389 VVNYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVR 446
           +++YH+HNS G+ +RL+   S     VP +  L    WE+   E+ LL+ELG+GQFGVV+
Sbjct: 349 LIHYHQHNSAGMITRLRHPVSTKANKVPVSVALGSGIWELKREEITLLKELGNGQFGVVQ 408

Query: 447 RGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
            G+W+G  DVA  M+KEG MSED+F +EA+ M +L H  LV+ YGVCSK  PIYIVT+
Sbjct: 409 LGQWKGQYDVAVKMIKEGAMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKKYPIYIVTE 466

Non-receptor tyrosine kinase that plays central but diverse modulatory roles in various signaling processes involved in the regulation of actin reorganization, cell migration, cell proliferation and survival, cell adhesion, and apoptosis. Participates in signal transduction stimulated by growth factor receptors, cytokine receptors, G-protein coupled receptors, antigen receptors and integrins. Induces tyrosine phosphorylation of BCAR1 in response to integrin regulation. Activation of BMX by integrins is mediated by PTK2/FAK1, a key mediator of integrin signaling events leading to the regulation of actin cytoskeleton and cell motility. Plays a critical role in TNF-induced angiogenesis, and implicated in the signaling of TEK and FLT1 receptors, 2 important receptor families essential for angiogenesis. Required for the phosphorylation and activation of STAT3, a transcription factor involved in cell differentiation. Also involved in interleukin-6 (IL6) induced differentiation. Plays also a role in programming adaptive cytoprotection against extracellular stress in different cell systems, salivary epithelial cells, brain endothelial cells, and dermal fibroblasts. May be involved in regulation of endocytosis through its interaction with an endosomal protein RUFY1. May also play a role in the growth and differentiation of hematopoietic cells; as well as in signal transduction in endocardial and arterial endothelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	513
383849754	711	PREDICTED: tyrosine-protein kinase Btk29	0.397	0.286	0.793	2e-90
380028436	722	PREDICTED: tyrosine-protein kinase Btk29	0.397	0.282	0.793	3e-90
307206152	504	Tyrosine-protein kinase Btk29A [Harpegna	0.397	0.404	0.793	4e-90
328780764	694	PREDICTED: tyrosine-protein kinase Btk29	0.397	0.293	0.793	4e-90
340727645	691	PREDICTED: tyrosine-protein kinase Btk29	0.397	0.295	0.788	4e-90
242006732	644	predicted protein [Pediculus humanus cor	0.397	0.316	0.783	6e-90
350412029	518	PREDICTED: tyrosine-protein kinase Btk29	0.397	0.393	0.793	8e-90
332018953	422	Tyrosine-protein kinase Btk29A [Acromyrm	0.397	0.483	0.793	1e-89
345487249	711	PREDICTED: tyrosine-protein kinase Btk29	0.397	0.286	0.788	1e-89
307183119	479	Tyrosine-protein kinase Btk29A [Camponot	0.397	0.425	0.788	1e-89

>gi|383849754|ref|XP_003700502.1| PREDICTED: tyrosine-protein kinase Btk29A-like [Megachile rotundata]

 Score =  339 bits (869), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 165/208 (79%), Positives = 183/208 (87%), Gaps = 4/208 (1%)

Query: 299 VPHPHVKHYHIKQNSRGEFFLSE--KHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTK 356
           +P  +VK   +    + E+++ +  +    S+ + +DKEGCFVVRNSSTKGLYTLSLYTK
Sbjct: 316 IPSNYVKEKELLGLQKYEWYVGDMSRQRAESLLKQEDKEGCFVVRNSSTKGLYTLSLYTK 375

Query: 357 VPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPAT 416
           VPHPHVKHYHIKQN+RGEF+LSEKHCC SIP++VNYHRHNSGGLASRLKTSPCDRPVP T
Sbjct: 376 VPHPHVKHYHIKQNTRGEFYLSEKHCCGSIPDLVNYHRHNSGGLASRLKTSPCDRPVPPT 435

Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAK 474
           AGLSHDKWEIDPAEL LLEELGSGQFGVVRRGKWRGSIDVA  MMKEGTMSEDDFIEEAK
Sbjct: 436 AGLSHDKWEIDPAELHLLEELGSGQFGVVRRGKWRGSIDVAVKMMKEGTMSEDDFIEEAK 495

Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           VMT+LQHQNLVQLYGVCSK RPIYIVT+
Sbjct: 496 VMTKLQHQNLVQLYGVCSKDRPIYIVTE 523

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380028436|ref|XP_003697908.1| PREDICTED: tyrosine-protein kinase Btk29A-like [Apis florea]

 Score =  338 bits (868), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 165/208 (79%), Positives = 183/208 (87%), Gaps = 4/208 (1%)

Query: 299 VPHPHVKHYHIKQNSRGEFFLSE--KHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTK 356
           +P  +VK   +    + E+++ +  +    S+ + +DKEGCFVVRNSSTKGLYTLSLYTK
Sbjct: 327 IPSNYVKEKELLGLQKYEWYVGDMSRQRAESLLKQEDKEGCFVVRNSSTKGLYTLSLYTK 386

Query: 357 VPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPAT 416
           VPHPHVKHYHIKQN+RGEF+LSEKHCC SIP++VNYHRHNSGGLASRLKTSPCDRPVP T
Sbjct: 387 VPHPHVKHYHIKQNTRGEFYLSEKHCCGSIPDLVNYHRHNSGGLASRLKTSPCDRPVPPT 446

Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAK 474
           AGLSHDKWEIDPAEL LLEELGSGQFGVVRRGKWRGSIDVA  MMKEGTMSEDDFIEEAK
Sbjct: 447 AGLSHDKWEIDPAELHLLEELGSGQFGVVRRGKWRGSIDVAVKMMKEGTMSEDDFIEEAK 506

Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           VMT+LQHQNLVQLYGVCSK RPIYIVT+
Sbjct: 507 VMTKLQHQNLVQLYGVCSKDRPIYIVTE 534

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307206152|gb|EFN84232.1| Tyrosine-protein kinase Btk29A [Harpegnathos saltator]

 Score =  338 bits (867), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 165/208 (79%), Positives = 183/208 (87%), Gaps = 4/208 (1%)

Query: 299 VPHPHVKHYHIKQNSRGEFFLSE--KHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTK 356
           +P  +VK   +    + E+++ +  +    S+ + +DKEGCFVVRNSSTKGLYTLSLYTK
Sbjct: 109 IPSNYVKEKELLGLQKYEWYVGDMSRQRAESLLKQEDKEGCFVVRNSSTKGLYTLSLYTK 168

Query: 357 VPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPAT 416
           VPHPHVKHYHIKQN+RGEF+LSEKHCC SIP++VNYHRHNSGGLASRLKTSPCDRPVP T
Sbjct: 169 VPHPHVKHYHIKQNTRGEFYLSEKHCCGSIPDLVNYHRHNSGGLASRLKTSPCDRPVPPT 228

Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAK 474
           AGLSHDKWEIDPAEL LLEELGSGQFGVVRRGKWRGSIDVA  MMKEGTMSEDDFIEEAK
Sbjct: 229 AGLSHDKWEIDPAELHLLEELGSGQFGVVRRGKWRGSIDVAVKMMKEGTMSEDDFIEEAK 288

Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           VMT+LQHQNLVQLYGVCSK RPIYIVT+
Sbjct: 289 VMTKLQHQNLVQLYGVCSKDRPIYIVTE 316

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328780764|ref|XP_394126.4| PREDICTED: tyrosine-protein kinase Btk29A-like [Apis mellifera]

 Score =  338 bits (867), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 165/208 (79%), Positives = 183/208 (87%), Gaps = 4/208 (1%)

Query: 299 VPHPHVKHYHIKQNSRGEFFLSE--KHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTK 356
           +P  +VK   +    + E+++ +  +    S+ + +DKEGCFVVRNSSTKGLYTLSLYTK
Sbjct: 299 IPSNYVKEKELLGLQKYEWYVGDMSRQRAESLLKQEDKEGCFVVRNSSTKGLYTLSLYTK 358

Query: 357 VPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPAT 416
           VPHPHVKHYHIKQN+RGEF+LSEKHCC SIP++VNYHRHNSGGLASRLKTSPCDRPVP T
Sbjct: 359 VPHPHVKHYHIKQNTRGEFYLSEKHCCGSIPDLVNYHRHNSGGLASRLKTSPCDRPVPPT 418

Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAK 474
           AGLSHDKWEIDPAEL LLEELGSGQFGVVRRGKWRGSIDVA  MMKEGTMSEDDFIEEAK
Sbjct: 419 AGLSHDKWEIDPAELHLLEELGSGQFGVVRRGKWRGSIDVAVKMMKEGTMSEDDFIEEAK 478

Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           VMT+LQHQNLVQLYGVCSK RPIYIVT+
Sbjct: 479 VMTKLQHQNLVQLYGVCSKDRPIYIVTE 506

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340727645|ref|XP_003402150.1| PREDICTED: tyrosine-protein kinase Btk29A-like [Bombus terrestris]

 Score =  338 bits (867), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 164/208 (78%), Positives = 183/208 (87%), Gaps = 4/208 (1%)

Query: 299 VPHPHVKHYHIKQNSRGEFFLSE--KHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTK 356
           +P  +VK   +    R E+++ +  +    S+ + +DKEGCFVVRNSSTKGLYTLSLYTK
Sbjct: 296 IPSNYVKEKELLGLQRYEWYVGDMSRQRAESLLKQEDKEGCFVVRNSSTKGLYTLSLYTK 355

Query: 357 VPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPAT 416
           VPHPHVKHYHIKQN+RGEF+LSEKHCC SIP+++NYH+HNSGGLASRLKTSPCDRPVP T
Sbjct: 356 VPHPHVKHYHIKQNTRGEFYLSEKHCCGSIPDLINYHKHNSGGLASRLKTSPCDRPVPPT 415

Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAK 474
           AGLSHDKWEIDPAEL LLEELGSGQFGVVRRGKWRGSIDVA  MMKEGTMSEDDFIEEAK
Sbjct: 416 AGLSHDKWEIDPAELHLLEELGSGQFGVVRRGKWRGSIDVAVKMMKEGTMSEDDFIEEAK 475

Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           VMT+LQHQNLVQLYGVCSK RPIYIVT+
Sbjct: 476 VMTKLQHQNLVQLYGVCSKDRPIYIVTE 503

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242006732|ref|XP_002424201.1| predicted protein [Pediculus humanus corporis] gi|212507542|gb|EEB11463.1| predicted protein [Pediculus humanus corporis]

 Score =  337 bits (865), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 163/208 (78%), Positives = 182/208 (87%), Gaps = 4/208 (1%)

Query: 299 VPHPHVKHYHIKQNSRGEFFLSE--KHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTK 356
           +P  +VK   +    + E+++ +  +    S+ + +DKEGCFVVRNSSTKGLYTLSLYTK
Sbjct: 277 IPSNYVKEKELLGLQKYEWYVGDMSRQRAESLLKQEDKEGCFVVRNSSTKGLYTLSLYTK 336

Query: 357 VPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPAT 416
           VPHPHVKHYHIKQ++RG+FFLSEKHCC SIP++VNYHRHNSGGLASRLKTSPCDRPVPAT
Sbjct: 337 VPHPHVKHYHIKQSARGDFFLSEKHCCGSIPDLVNYHRHNSGGLASRLKTSPCDRPVPAT 396

Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAK 474
           AGLSHDKWEI P ELML EELGSGQFGVVRRGKWRGSIDVA  MMKEGTMSEDDFI EAK
Sbjct: 397 AGLSHDKWEISPTELMLQEELGSGQFGVVRRGKWRGSIDVAVKMMKEGTMSEDDFIAEAK 456

Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           VMT+LQHQNLVQLYGVCSKHRPIYIVT+
Sbjct: 457 VMTKLQHQNLVQLYGVCSKHRPIYIVTE 484

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350412029|ref|XP_003489521.1| PREDICTED: tyrosine-protein kinase Btk29A-like [Bombus impatiens]

 Score =  337 bits (864), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 165/208 (79%), Positives = 183/208 (87%), Gaps = 4/208 (1%)

Query: 299 VPHPHVKHYHIKQNSRGEFFLSE--KHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTK 356
           +P  +VK   +    + E+++ +  +    S+ + +DKEGCFVVRNSSTKGLYTLSLYTK
Sbjct: 123 IPSNYVKEKELLGLQKYEWYVGDMSRQRAESLLKQEDKEGCFVVRNSSTKGLYTLSLYTK 182

Query: 357 VPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPAT 416
           VPHPHVKHYHIKQN+RGEF+LSEKHCC SIP++VNYHRHNSGGLASRLKTSPCDRPVP T
Sbjct: 183 VPHPHVKHYHIKQNTRGEFYLSEKHCCGSIPDLVNYHRHNSGGLASRLKTSPCDRPVPPT 242

Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAK 474
           AGLSHDKWEIDPAEL LLEELGSGQFGVVRRGKWRGSIDVA  MMKEGTMSEDDFIEEAK
Sbjct: 243 AGLSHDKWEIDPAELHLLEELGSGQFGVVRRGKWRGSIDVAVKMMKEGTMSEDDFIEEAK 302

Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           VMT+LQHQNLVQLYGVCSK RPIYIVT+
Sbjct: 303 VMTKLQHQNLVQLYGVCSKDRPIYIVTE 330

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018953|gb|EGI59499.1| Tyrosine-protein kinase Btk29A [Acromyrmex echinatior]

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 165/208 (79%), Positives = 183/208 (87%), Gaps = 4/208 (1%)

Query: 299 VPHPHVKHYHIKQNSRGEFFLSE--KHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTK 356
           +P  +VK   +    + E+++ +  +    S+ + +DKEGCFVVRNSSTKGLYTLSLYTK
Sbjct: 27  IPSNYVKEKELLGLQKYEWYVGDMSRQRAESLLKQEDKEGCFVVRNSSTKGLYTLSLYTK 86

Query: 357 VPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPAT 416
           VPHPHVKHYHIKQN+RGEF+LSEKHCC SIP++VNYHRHNSGGLASRLKTSPCDRPVP T
Sbjct: 87  VPHPHVKHYHIKQNTRGEFYLSEKHCCGSIPDLVNYHRHNSGGLASRLKTSPCDRPVPPT 146

Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAK 474
           AGLSHDKWEIDPAEL LLEELGSGQFGVVRRGKWRGSIDVA  MMKEGTMSEDDFIEEAK
Sbjct: 147 AGLSHDKWEIDPAELHLLEELGSGQFGVVRRGKWRGSIDVAVKMMKEGTMSEDDFIEEAK 206

Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           VMT+LQHQNLVQLYGVCSK RPIYIVT+
Sbjct: 207 VMTKLQHQNLVQLYGVCSKDRPIYIVTE 234

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345487249|ref|XP_003425657.1| PREDICTED: tyrosine-protein kinase Btk29A-like isoform 2 [Nasonia vitripennis]

 Score =  336 bits (862), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 164/208 (78%), Positives = 181/208 (87%), Gaps = 4/208 (1%)

Query: 299 VPHPHVKHYHIKQNSRGEFFLSE--KHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTK 356
           +P  +VK   +    + E+++ +  +    S+ + +DKEGCFVVRNSSTKGLYTLSLYTK
Sbjct: 316 IPSNYVKEKELLGLQKYEWYVGDMSRQRAESLLKQEDKEGCFVVRNSSTKGLYTLSLYTK 375

Query: 357 VPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPAT 416
           VPHPHVKHYHIKQN RGEF+LSEKHCC SIP++VNYHRHNSGGLASRLK SPCDRPVP T
Sbjct: 376 VPHPHVKHYHIKQNQRGEFYLSEKHCCGSIPDLVNYHRHNSGGLASRLKASPCDRPVPPT 435

Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAK 474
           AGLSHDKWEIDPAEL LLEELGSGQFGVVRRGKWRGSIDVA  MMKEGTMSEDDFIEEAK
Sbjct: 436 AGLSHDKWEIDPAELHLLEELGSGQFGVVRRGKWRGSIDVAVKMMKEGTMSEDDFIEEAK 495

Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           VMT+LQHQNLVQLYGVCSK RPIYIVT+
Sbjct: 496 VMTKLQHQNLVQLYGVCSKDRPIYIVTE 523

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307183119|gb|EFN70036.1| Tyrosine-protein kinase Btk29A [Camponotus floridanus]

 Score =  336 bits (862), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 164/208 (78%), Positives = 183/208 (87%), Gaps = 4/208 (1%)

Query: 299 VPHPHVKHYHIKQNSRGEFFLSE--KHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTK 356
           +P  +VK   +    + E+++ +  +    S+ + +DKEGCFVVRNSSTKGLYTLSLYTK
Sbjct: 84  IPSNYVKEKELLGLQKYEWYVGDMSRQRAESLLKQEDKEGCFVVRNSSTKGLYTLSLYTK 143

Query: 357 VPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPAT 416
           VPHPHVKHYHIKQN+RGEF+LSEKHCC SIP++VNYHRHNSGGLASRLKTSPCDRPVP T
Sbjct: 144 VPHPHVKHYHIKQNTRGEFYLSEKHCCGSIPDLVNYHRHNSGGLASRLKTSPCDRPVPPT 203

Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAK 474
           AGLSHDKWEIDPAEL LLEELGSGQFGVVRRGKWRG+IDVA  MMKEGTMSEDDFIEEAK
Sbjct: 204 AGLSHDKWEIDPAELHLLEELGSGQFGVVRRGKWRGTIDVAVKMMKEGTMSEDDFIEEAK 263

Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           VMT+LQHQNLVQLYGVCSK RPIYIVT+
Sbjct: 264 VMTKLQHQNLVQLYGVCSKDRPIYIVTE 291

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	513
FB|FBgn0003502	786	Btk29A "Btk family kinase at 2	0.520	0.339	0.599	8.5e-81
UNIPROTKB|F1SEA4	596	TEC "Uncharacterized protein"	0.333	0.286	0.544	6.1e-66
UNIPROTKB|K7GR59	632	TEC "Uncharacterized protein"	0.333	0.270	0.544	6.1e-66
UNIPROTKB|D4A596	630	Tec "Protein Tec" [Rattus norv	0.333	0.271	0.544	2e-65
UNIPROTKB|F1NZY8	630	TEC "Uncharacterized protein"	0.333	0.271	0.555	2.6e-65
MGI|MGI:98662	630	Tec "tec protein tyrosine kina	0.333	0.271	0.544	3.3e-65
UNIPROTKB|F1PBW9	630	TEC "Uncharacterized protein"	0.333	0.271	0.538	6.8e-65
UNIPROTKB|F1MSH3	596	TEC "Uncharacterized protein"	0.333	0.286	0.538	6.8e-65
UNIPROTKB|P42680	631	TEC "Tyrosine-protein kinase T	0.333	0.270	0.538	1.1e-64
UNIPROTKB|F1S1L0	659	BTK "Uncharacterized protein"	0.329	0.256	0.551	2.9e-64

FB|FBgn0003502 Btk29A "Btk family kinase at 29A" [Drosophila melanogaster (taxid:7227)]

 Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
 Identities = 169/282 (59%), Positives = 206/282 (73%)

Query:   229 GKMPYGRLKNTEVVDR---VQRGIILEKPKAWYVGDMSRQR-AESILKQEDKEGCFVVRN 284
             G +P     N++  D    V+  + L   KA   GD+S ++ AE  +  + +E  + V++
Sbjct:   325 GGIPTPGTPNSKAKDNSHFVKLVVALYPFKAIEGGDLSLEKNAEYEVIDDSQEHWWKVKD 384

Query:   285 SSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSE--KHCCHSIPEVKDKEGCFVVRN 342
             +     Y       +P  +VK   +    R E+++ +  +    S+ +  DKEGCFVVR 
Sbjct:   385 ALGNVGY-------IPSNYVKPKALLGLERYEWYVGDMSRQRAESLLKQGDKEGCFVVRK 437

Query:   343 SSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLAS 402
             SSTKGLYTLSL+TKVP  HVKHYHIKQN+R E++LSEKHCC +IP+++NYHRHNSGGLA 
Sbjct:   438 SSTKGLYTLSLHTKVPQSHVKHYHIKQNARCEYYLSEKHCCETIPDLINYHRHNSGGLAC 497

Query:   403 RLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMK 460
             RLK+SPCDRPVP TAGLSHDKWEI P ELML+EELGSGQFGVVRRGKWRGSID A  MMK
Sbjct:   498 RLKSSPCDRPVPPTAGLSHDKWEIHPMELMLMEELGSGQFGVVRRGKWRGSIDTAVKMMK 557

Query:   461 EGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
             EGTMSEDDFIEEAKVMT+LQH NLVQLYGVCSKHRPIYIVT+
Sbjct:   558 EGTMSEDDFIEEAKVMTKLQHPNLVQLYGVCSKHRPIYIVTE 599

GO:0004713 "protein tyrosine kinase activity" evidence=ISS;NAS;IDA

GO:0006468 "protein phosphorylation" evidence=ISS;NAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0007301 "female germline ring canal formation" evidence=IEP;IMP

GO:0008258 "head involution" evidence=IMP

GO:0045172 "germline ring canal" evidence=IDA;TAS

GO:0007485 "imaginal disc-derived male genitalia development" evidence=IMP;IDA

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0007619 "courtship behavior" evidence=NAS

GO:0007391 "dorsal closure" evidence=TAS

GO:0007254 "JNK cascade" evidence=TAS

GO:0007349 "cellularization" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0048477 "oogenesis" evidence=IMP

GO:0030723 "ovarian fusome organization" evidence=IMP

GO:0030717 "karyosome formation" evidence=IMP

GO:0030036 "actin cytoskeleton organization" evidence=IMP

GO:0007300 "ovarian nurse cell to oocyte transport" evidence=IMP

GO:0007435 "salivary gland morphogenesis" evidence=IMP

GO:0042023 "DNA endoreduplication" evidence=IMP

GO:0030833 "regulation of actin filament polymerization" evidence=IMP

GO:0007424 "open tracheal system development" evidence=IMP

GO:0046960 "sensitization" evidence=IMP

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

UNIPROTKB|F1SEA4 TEC "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 496 (179.7 bits), Expect = 6.1e-66, Sum P(2) = 6.1e-66
 Identities = 98/180 (54%), Positives = 130/180 (72%)

Query:   332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQN--SRGEFFLSEKHCCHSI 386
             +DKEG F+VR+SS  G+YT+SLYTK         +HYHIK+   S  +++L+EKH   SI
Sbjct:   229 EDKEGGFMVRDSSQPGMYTVSLYTKFGGEGSSGFRHYHIKETMTSPKKYYLAEKHAFPSI 288

Query:   387 PEVVNYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGV 444
             PE++ YH+HN+ GL +RL+   S  ++  P TAG S++KWEI+P+EL  + ELGSG FGV
Sbjct:   289 PEIIEYHKHNAAGLVTRLRYPVSAKEKNAPTTAGFSYEKWEINPSELTFMRELGSGLFGV 348

Query:   445 VRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
             VR GKWR    VA+  ++EG M E+DFIEEAKVM +L H  LVQLYGVC++ RPIYIVT+
Sbjct:   349 VRLGKWRAQYKVAIKAIREGAMCEEDFIEEAKVMMKLTHPKLVQLYGVCTQQRPIYIVTE 408

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

GO:0010543 "regulation of platelet activation" evidence=IEA

GO:0007229 "integrin-mediated signaling pathway" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|K7GR59 TEC "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 496 (179.7 bits), Expect = 6.1e-66, Sum P(2) = 6.1e-66
 Identities = 98/180 (54%), Positives = 130/180 (72%)

Query:   332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQN--SRGEFFLSEKHCCHSI 386
             +DKEG F+VR+SS  G+YT+SLYTK         +HYHIK+   S  +++L+EKH   SI
Sbjct:   265 EDKEGGFMVRDSSQPGMYTVSLYTKFGGEGSSGFRHYHIKETMTSPKKYYLAEKHAFPSI 324

Query:   387 PEVVNYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGV 444
             PE++ YH+HN+ GL +RL+   S  ++  P TAG S++KWEI+P+EL  + ELGSG FGV
Sbjct:   325 PEIIEYHKHNAAGLVTRLRYPVSAKEKNAPTTAGFSYEKWEINPSELTFMRELGSGLFGV 384

Query:   445 VRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
             VR GKWR    VA+  ++EG M E+DFIEEAKVM +L H  LVQLYGVC++ RPIYIVT+
Sbjct:   385 VRLGKWRAQYKVAIKAIREGAMCEEDFIEEAKVMMKLTHPKLVQLYGVCTQQRPIYIVTE 444

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|D4A596 Tec "Protein Tec" [Rattus norvegicus (taxid:10116)]

 Score = 496 (179.7 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
 Identities = 98/180 (54%), Positives = 129/180 (71%)

Query:   332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNSRG--EFFLSEKHCCHSI 386
             +DKEG F+VR+SS  GLYT+SLYTK         +HYHIK+ +    +++L+EKH   SI
Sbjct:   263 EDKEGGFMVRDSSQPGLYTVSLYTKFGGEGSSGFRHYHIKETATSPKKYYLAEKHAFGSI 322

Query:   387 PEVVNYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGV 444
             PE++ YH+HN+ GL +RL+   S   +  P TAG S+DKWEI+P+EL  + ELGSG FGV
Sbjct:   323 PEIIEYHKHNAAGLVTRLRYPVSTKGKNAPTTAGFSYDKWEINPSELTFMRELGSGLFGV 382

Query:   445 VRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
             VR GKWR    VA+  ++EG M E+DFIEEAKVM +L H  LVQLYGVC++ +PIYIVT+
Sbjct:   383 VRLGKWRAQYKVAIKAIREGAMCEEDFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTE 442

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0007229 "integrin-mediated signaling pathway" evidence=IEA

GO:0010543 "regulation of platelet activation" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

UNIPROTKB|F1NZY8 TEC "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 507 (183.5 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
 Identities = 100/180 (55%), Positives = 131/180 (72%)

Query:   332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQN--SRGEFFLSEKHCCHSI 386
             +DKEG FVVR+SS  GLYT+SLYTK        ++HYHIK+   S  +++L+EKH  +SI
Sbjct:   265 EDKEGGFVVRDSSQPGLYTVSLYTKFGGEGSSGIRHYHIKETVTSPKQYYLAEKHLFNSI 324

Query:   387 PEVVNYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGV 444
             PE++ YH+HN+ GL +RL+   +P     P TAG S++KWEI+P+EL  + ELGSG FGV
Sbjct:   325 PEIIEYHKHNAAGLVTRLRYPVTPKKTAAPTTAGFSYEKWEINPSELTFMRELGSGLFGV 384

Query:   445 VRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
             VR GKWR    VA+  ++EG M E+DFIEEAKVM +L H  LVQLYGVC++ RPIYIVT+
Sbjct:   385 VRLGKWRAQYKVAIKAIREGAMYEEDFIEEAKVMMKLTHPKLVQLYGVCTQQRPIYIVTE 444

GO:0005543 "phospholipid binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0007229 "integrin-mediated signaling pathway" evidence=IEA

GO:0010543 "regulation of platelet activation" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

MGI|MGI:98662 Tec "tec protein tyrosine kinase" [Mus musculus (taxid:10090)]

 Score = 496 (179.7 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
 Identities = 98/180 (54%), Positives = 129/180 (71%)

Query:   332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNSRG--EFFLSEKHCCHSI 386
             +DKEG F+VR+SS  GLYT+SLYTK         +HYHIK+ +    +++L+EKH   SI
Sbjct:   263 EDKEGGFMVRDSSQPGLYTVSLYTKFGGEGSSGFRHYHIKETATSPKKYYLAEKHAFGSI 322

Query:   387 PEVVNYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGV 444
             PE++ YH+HN+ GL +RL+   S   +  P TAG S+DKWEI+P+EL  + ELGSG FGV
Sbjct:   323 PEIIEYHKHNAAGLVTRLRYPVSTKGKNAPTTAGFSYDKWEINPSELTFMRELGSGLFGV 382

Query:   445 VRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
             VR GKWR    VA+  ++EG M E+DFIEEAKVM +L H  LVQLYGVC++ +PIYIVT+
Sbjct:   383 VRLGKWRAQYKVAIKAIREGAMCEEDFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTE 442

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=ISO

GO:0005886 "plasma membrane" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0007229 "integrin-mediated signaling pathway" evidence=ISO

GO:0008289 "lipid binding" evidence=IEA

GO:0010543 "regulation of platelet activation" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=ISO

UNIPROTKB|F1PBW9 TEC "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 496 (179.7 bits), Expect = 6.8e-65, Sum P(2) = 6.8e-65
 Identities = 97/180 (53%), Positives = 130/180 (72%)

Query:   332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNSRG--EFFLSEKHCCHSI 386
             +DKEG F+VR+SS  G+YT+SLYTK         +HYHIK+ +    +++L+EKH   SI
Sbjct:   263 EDKEGGFMVRDSSQPGMYTVSLYTKFGGEGSSGFRHYHIKETTTSPKKYYLAEKHAFGSI 322

Query:   387 PEVVNYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGV 444
             PE++ YH+HN+ GL +RL+   S  ++  P TAG S++KWEI+P+EL  + ELGSG FGV
Sbjct:   323 PEIIEYHKHNAAGLVTRLRYPVSTKEKNAPTTAGFSYEKWEINPSELTFMRELGSGLFGV 382

Query:   445 VRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
             VR GKWR    VA+  +KEG M E+DFIEEAKVM +L H  LVQLYGVC++ +PIYIVT+
Sbjct:   383 VRLGKWRAQYKVAIKAIKEGAMCEEDFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTE 442

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|F1MSH3 TEC "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 490 (177.5 bits), Expect = 6.8e-65, Sum P(2) = 6.8e-65
 Identities = 97/180 (53%), Positives = 129/180 (71%)

Query:   332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQN--SRGEFFLSEKHCCHSI 386
             +DKEG F+VR+SS  G+YT+SLYTK         +HYHIK+   S  +++L+EKH   SI
Sbjct:   229 EDKEGGFMVRDSSQPGMYTVSLYTKFGGEGSSGFRHYHIKETMTSPKKYYLAEKHAFGSI 288

Query:   387 PEVVNYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGV 444
             PE++ YH+HN+ GL +RL+   S   +  P TAG S++KWEI+P+EL  + ELGSG FGV
Sbjct:   289 PEIIEYHKHNAAGLVTRLRYPVSTKGKNAPTTAGFSYEKWEINPSELTFMRELGSGLFGV 348

Query:   445 VRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
             VR GKWR    VA+  ++EG M E+DFIEEAKVM +L H  LVQLYGVC++ +PIYIVT+
Sbjct:   349 VRLGKWRAQYKVAIKAIREGAMCEEDFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTE 408

GO:0050853 "B cell receptor signaling pathway" evidence=IEA

GO:0010543 "regulation of platelet activation" evidence=IEA

GO:0007229 "integrin-mediated signaling pathway" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|P42680 TEC "Tyrosine-protein kinase Tec" [Homo sapiens (taxid:9606)]

 Score = 491 (177.9 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
 Identities = 97/180 (53%), Positives = 129/180 (71%)

Query:   332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNSRG--EFFLSEKHCCHSI 386
             +DKEG F+VR+SS  GLYT+SLYTK         +HYHIK+ +    +++L+EKH   SI
Sbjct:   264 EDKEGGFMVRDSSQPGLYTVSLYTKFGGEGSSGFRHYHIKETTTSPKKYYLAEKHAFGSI 323

Query:   387 PEVVNYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGV 444
             PE++ YH+HN+ GL +RL+   S   +  P TAG S++KWEI+P+EL  + ELGSG FGV
Sbjct:   324 PEIIEYHKHNAAGLVTRLRYPVSVKGKNAPTTAGFSYEKWEINPSELTFMRELGSGLFGV 383

Query:   445 VRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
             VR GKWR    VA+  ++EG M E+DFIEEAKVM +L H  LVQLYGVC++ +PIYIVT+
Sbjct:   384 VRLGKWRAQYKVAIKAIREGAMCEEDFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTE 443

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0050853 "B cell receptor signaling pathway" evidence=IDA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IDA

GO:0010543 "regulation of platelet activation" evidence=IDA

GO:0007229 "integrin-mediated signaling pathway" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=TAS

GO:0007243 "intracellular protein kinase cascade" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|F1S1L0 BTK "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 509 (184.2 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
 Identities = 97/176 (55%), Positives = 130/176 (73%)

Query:   334 KEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
             KEG F+VR+SS  G YT+S++ K    P   ++HY +    + +++L+EKH   +IPE++
Sbjct:   300 KEGGFIVRDSSKAGKYTVSVFAKATGEPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPELI 359

Query:   391 NYHRHNSGGLASRLK--TSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG 448
             NYH+HNS GL SRLK   S  ++  P+TAGL +  WEIDP +L  L+ELG+GQFGVV+ G
Sbjct:   360 NYHQHNSAGLISRLKYPVSQQNKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYG 419

Query:   449 KWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
             KWRG  DVA  M+KEG+MSED+FIEEAKVM  L H+ LVQLYGVC+K RPI+I+T+
Sbjct:   420 KWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 475

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	513
cd09934	104	cd09934, SH2_Tec_family, Src homology 2 (SH2) doma	1e-44
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-42
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	4e-34
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-31
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	5e-29
cd11768	54	cd11768, SH3_Tec_like, Src Homology 3 domain of Te	2e-28
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	2e-25
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-25
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	9e-25
cd10396	108	cd10396, SH2_Tec_Itk, Src homology 2 (SH2) domain	3e-24
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-23
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-21
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-21
cd10399	106	cd10399, SH2_Tec_Bmx, Src homology 2 (SH2) domain	1e-20
cd10397	106	cd10397, SH2_Tec_Btk, Src homology 2 (SH2) domain	3e-20
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	6e-20
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	7e-20
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-19
cd10398	106	cd10398, SH2_Tec_Txk, Src homology 2 (SH2) domain	2e-19
cd10397	106	cd10397, SH2_Tec_Btk, Src homology 2 (SH2) domain	7e-19
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-18
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-18
pfam00017	77	pfam00017, SH2, SH2 domain	4e-18
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-18
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	5e-18
cd10398	106	cd10398, SH2_Tec_Txk, Src homology 2 (SH2) domain	7e-18
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	9e-18
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-17
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-17
cd11905	56	cd11905, SH3_Tec, Src Homology 3 domain of Tec (Ty	3e-17
smart00252	84	smart00252, SH2, Src homology 2 domains	1e-16
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	2e-16
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	2e-16
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	2e-16
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-16
smart00326	56	smart00326, SH3, Src homology 3 domains	3e-16
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-14
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-14
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	3e-14
cd11906	55	cd11906, SH3_BTK, Src Homology 3 domain of Bruton'	4e-14
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	6e-14
smart00252	84	smart00252, SH2, Src homology 2 domains	1e-13
cd00173	79	cd00173, SH2, Src homology 2 (SH2) domain	1e-13
pfam00018	47	pfam00018, SH3_1, SH3 domain	1e-13
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-13
cd11845	52	cd11845, SH3_Src_like, Src homology 3 domain of Sr	2e-13
cd11908	56	cd11908, SH3_ITK, Src Homology 3 domain of Interle	4e-13
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	5e-13
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	5e-13
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	1e-12
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	1e-12
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-12
cd00174	51	cd00174, SH3, Src Homology 3 domain superfamily	2e-12
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-12
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-12
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	4e-12
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-12
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	5e-12
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	6e-12
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	7e-12
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	7e-12
cd11765	51	cd11765, SH3_Nck_1, First Src Homology 3 domain of	9e-12
cd11767	56	cd11767, SH3_Nck_3, Third Src Homology 3 domain of	1e-11
cd11849	53	cd11849, SH3_SPIN90, Src homology 3 domain of SH3	1e-11
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-11
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-11
pfam00017	77	pfam00017, SH2, SH2 domain	2e-11
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-11
cd11907	55	cd11907, SH3_TXK, Src Homology 3 domain of TXK, al	2e-11
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-11
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-11
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	6e-11
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	7e-11
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-10
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	2e-10
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-10
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-10
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-10
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	2e-10
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	2e-10
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-10
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-10
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-10
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	4e-10
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	4e-10
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	5e-10
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	7e-10
pfam00018	47	pfam00018, SH3_1, SH3 domain	8e-10
cd09933	101	cd09933, SH2_Src_family, Src homology 2 (SH2) doma	9e-10
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-09
cd12007	58	cd12007, SH3_Yes, Src homology 3 domain of Yes Pro	1e-09
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-09
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-09
cd11905	56	cd11905, SH3_Tec, Src Homology 3 domain of Tec (Ty	2e-09
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	2e-09
smart00326	56	smart00326, SH3, Src homology 3 domains	2e-09
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	2e-09
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	4e-09
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	4e-09
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	4e-09
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	4e-09
cd10369	96	cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain	5e-09
cd00173	79	cd00173, SH2, Src homology 2 (SH2) domain	7e-09
cd09933	101	cd09933, SH2_Src_family, Src homology 2 (SH2) doma	7e-09
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	8e-09
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	8e-09
cd11764	54	cd11764, SH3_Eps8, Src Homology 3 domain of Epider	9e-09
cd10369	96	cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain	1e-08
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	1e-08
cd11841	54	cd11841, SH3_SH3YL1_like, Src homology 3 domain of	1e-08
cd11986	53	cd11986, SH3_Stac3_1, First C-terminal Src homolog	1e-08
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-08
cd09940	102	cd09940, SH2_Vav_family, Src homology 2 (SH2) doma	1e-08
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	1e-08
cd11840	53	cd11840, SH3_Intersectin_5, Fifth Src homology 3 d	1e-08
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	1e-08
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-08
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-08
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-08
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-08
cd12004	56	cd12004, SH3_Lyn, Src homology 3 domain of Lyn Pro	2e-08
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	2e-08
cd11903	59	cd11903, SH3_Nck2_3, Third Src Homology 3 domain o	2e-08
cd09941	95	cd09941, SH2_Grb2_like, Src homology 2 domain foun	2e-08
cd11833	53	cd11833, SH3_Stac_1, First C-terminal Src homology	2e-08
cd11837	53	cd11837, SH3_Intersectin_2, Second Src homology 3	2e-08
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	3e-08
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	3e-08
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	3e-08
cd12006	56	cd12006, SH3_Fyn_Yrk, Src homology 3 domain of Fyn	3e-08
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	3e-08
cd12009	54	cd12009, SH3_Blk, Src homology 3 domain of Blk Pro	3e-08
cd11770	54	cd11770, SH3_Nephrocystin, Src Homology 3 domain o	3e-08
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	4e-08
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	4e-08
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	4e-08
cd10347	81	cd10347, SH2_Nterm_shark_like, N-terminal Src homo	6e-08
cd11949	53	cd11949, SH3_GRB2_C, C-terminal Src homology 3 dom	6e-08
cd11845	52	cd11845, SH3_Src_like, Src homology 3 domain of Sr	7e-08
cd11769	57	cd11769, SH3_CSK, Src Homology 3 domain of C-termi	7e-08
cd11908	56	cd11908, SH3_ITK, Src Homology 3 domain of Interle	9e-08
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	9e-08
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	9e-08
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	9e-08
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-07
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-07
cd11986	53	cd11986, SH3_Stac3_1, First C-terminal Src homolog	1e-07
cd11758	55	cd11758, SH3_CRK_N, N-terminal Src Homology 3 doma	1e-07
cd11911	55	cd11911, SH3_CIP4-like, Src Homology 3 domain of C	1e-07
cd11985	53	cd11985, SH3_Stac2_C, C-terminal Src homology 3 do	1e-07
cd11761	57	cd11761, SH3_FCHSD_1, First Src Homology 3 domain	1e-07
cd11805	53	cd11805, SH3_GRB2_like_C, C-terminal Src homology	1e-07
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-07
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	2e-07
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	2e-07
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-07
cd11904	57	cd11904, SH3_Nck1_3, Third Src Homology 3 domain o	2e-07
cd10343	103	cd10343, SH2_SHIP, Src homology 2 (SH2) domain fou	2e-07
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	2e-07
cd10367	101	cd10367, SH2_Src_Fgr, Src homology 2 (SH2) domain	2e-07
cd11842	55	cd11842, SH3_Ysc84p_like, Src homology 3 domain of	2e-07
cd10365	101	cd10365, SH2_Src_Src, Src homology 2 (SH2) domain	2e-07
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-07
cd11906	55	cd11906, SH3_BTK, Src Homology 3 domain of Bruton'	3e-07
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	3e-07
cd10365	101	cd10365, SH2_Src_Src, Src homology 2 (SH2) domain	3e-07
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	3e-07
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	3e-07
cd11963	57	cd11963, SH3_STAM2, Src homology 3 domain of Signa	3e-07
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	3e-07
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	3e-07
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	3e-07
cd09930	104	cd09930, SH2_cSH2_p85_like, C-terminal Src homolog	3e-07
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	4e-07
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	4e-07
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	4e-07
cd11824	53	cd11824, SH3_PSTPIP1, Src homology 3 domain of Pro	4e-07
cd12005	54	cd12005, SH3_Lck, Src homology 3 domain of Lck Pro	4e-07
cd12008	56	cd12008, SH3_Src, Src homology 3 domain of Src Pro	4e-07
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	5e-07
cd11806	53	cd11806, SH3_PRMT2, Src homology 3 domain of Prote	5e-07
cd11964	55	cd11964, SH3_STAM1, Src homology 3 domain of Signa	5e-07
cd11772	53	cd11772, SH3_OSTF1, Src Homology 3 domain of metaz	5e-07
cd00174	51	cd00174, SH3, Src Homology 3 domain superfamily	6e-07
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	6e-07
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	6e-07
cd10363	104	cd10363, SH2_Src_HCK, Src homology 2 (SH2) domain	6e-07
cd11855	55	cd11855, SH3_Sho1p, Src homology 3 domain of High	7e-07
cd11856	53	cd11856, SH3_p47phox_like, Src homology 3 domains	7e-07
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	1e-06
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	1e-06
cd10355	92	cd10355, SH2_DAPP1_BAM32_like, Src homology 2 doma	1e-06
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	1e-06
cd11820	54	cd11820, SH3_STAM, Src homology 3 domain of Signal	1e-06
cd09945	98	cd09945, SH2_SHB_SHD_SHE_SHF_like, Src homology 2	1e-06
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-06
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	1e-06
cd09929	121	cd09929, SH2_BLNK_SLP-76, Src homology 2 (SH2) dom	1e-06
cd09935	94	cd09935, SH2_ABL, Src homology 2 (SH2) domain foun	1e-06
cd09932	104	cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src	1e-06
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-06
cd11996	54	cd11996, SH3_Intersectin2_5, Fifth Src homology 3	2e-06
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	2e-06
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	3e-06
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	3e-06
cd09940	102	cd09940, SH2_Vav_family, Src homology 2 (SH2) doma	3e-06
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	3e-06
cd11771	60	cd11771, SH3_Pex13p_fungal, Src Homology 3 domain	3e-06
cd11804	52	cd11804, SH3_GRB2_like_N, N-terminal Src homology	3e-06
cd11874	53	cd11874, SH3_CD2AP-like_2, Second Src Homology 3 d	3e-06
cd10419	101	cd10419, SH2_Src_Fyn_isoform_b_like, Src homology	3e-06
cd11899	58	cd11899, SH3_Nck2_1, First Src Homology 3 domain o	3e-06
cd10366	101	cd10366, SH2_Src_Yes, Src homology 2 (SH2) domain	3e-06
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	4e-06
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	4e-06
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	4e-06
cd11767	56	cd11767, SH3_Nck_3, Third Src Homology 3 domain of	5e-06
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	5e-06
cd10368	101	cd10368, SH2_Src_Fyn, Src homology 2 (SH2) domain	5e-06
cd10418	101	cd10418, SH2_Src_Fyn_isoform_a_like, Src homology	5e-06
cd12076	54	cd12076, SH3_Tks4_2, Second Src homology 3 domain	5e-06
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	6e-06
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	6e-06
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-06
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	6e-06
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	6e-06
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	6e-06
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	7e-06
cd11900	59	cd11900, SH3_Nck1_1, First Src Homology 3 domain o	7e-06
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	7e-06
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	8e-06
cd11907	55	cd11907, SH3_TXK, Src Homology 3 domain of TXK, al	9e-06
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	9e-06
cd11950	53	cd11950, SH3_GRAP2_C, C-terminal Src homology 3 do	9e-06
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	1e-05
cd11841	54	cd11841, SH3_SH3YL1_like, Src homology 3 domain of	1e-05
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	1e-05
cd09926	106	cd09926, SH2_CRK_like, Src homology 2 domain found	1e-05
cd11763	55	cd11763, SH3_SNX9_like, Src Homology 3 domain of S	1e-05
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	1e-05
cd11823	53	cd11823, SH3_Nostrin, Src homology 3 domain of Nit	1e-05
cd10348	86	cd10348, SH2_Cterm_shark_like, C-terminal Src homo	1e-05
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-05
cd11833	53	cd11833, SH3_Stac_1, First C-terminal Src homology	2e-05
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	2e-05
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	2e-05
cd10354	77	cd10354, SH2_Cterm_RasGAP, C-terminal Src homology	2e-05
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	2e-05
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	2e-05
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	2e-05
cd11995	54	cd11995, SH3_Intersectin1_5, Fifth Src homology 3	2e-05
cd11800	57	cd11800, SH3_DNMBP_C2_like, Second C-terminal Src	2e-05
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	2e-05
cd10362	101	cd10362, SH2_Src_Lck, Src homology 2 (SH2) domain	2e-05
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	3e-05
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-05
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	3e-05
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	3e-05
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	3e-05
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	3e-05
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	3e-05
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	3e-05
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	3e-05
cd11847	58	cd11847, SH3_Brk, Src homology 3 domain of Brk (Br	3e-05
cd11877	53	cd11877, SH3_PIX, Src Homology 3 domain of Pak Int	3e-05
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	4e-05
cd10366	101	cd10366, SH2_Src_Yes, Src homology 2 (SH2) domain	4e-05
cd11766	53	cd11766, SH3_Nck_2, Second Src Homology 3 domain o	4e-05
cd11812	52	cd11812, SH3_AHI-1, Src Homology 3 domain of Abels	4e-05
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	5e-05
cd10418	101	cd10418, SH2_Src_Fyn_isoform_a_like, Src homology	5e-05
cd11948	54	cd11948, SH3_GRAP_N, N-terminal Src homology 3 dom	5e-05
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	6e-05
cd11783	55	cd11783, SH3_SH3RF_3, Third Src Homology 3 domain	6e-05
cd11843	53	cd11843, SH3_PACSIN, Src homology 3 domain of Prot	6e-05
cd10370	96	cd10370, SH2_Src_Src42, Src homology 2 (SH2) domai	6e-05
cd11887	60	cd11887, SH3_Bbc1, Src Homology 3 domain of Bbc1 a	6e-05
cd10344	104	cd10344, SH2_SLAP, Src homology 2 domain found in	6e-05
cd11765	51	cd11765, SH3_Nck_1, First Src Homology 3 domain of	7e-05
cd12004	56	cd12004, SH3_Lyn, Src homology 3 domain of Lyn Pro	7e-05
cd11985	53	cd11985, SH3_Stac2_C, C-terminal Src homology 3 do	7e-05
cd10391	98	cd10391, SH2_SHE, Src homology 2 domain found in S	7e-05
cd11946	56	cd11946, SH3_GRB2_N, N-terminal Src homology 3 dom	8e-05
cd09923	81	cd09923, SH2_SOCS_family, Src homology 2 (SH2) dom	9e-05
cd11858	55	cd11858, SH3_Myosin-I_fungi, Src homology 3 domain	9e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	9e-05
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-04
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-04
cd11963	57	cd11963, SH3_STAM2, Src homology 3 domain of Signa	1e-04
cd10363	104	cd10363, SH2_Src_HCK, Src homology 2 (SH2) domain	1e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	1e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	1e-04
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	1e-04
cd11902	55	cd11902, SH3_Nck2_2, Second Src Homology 3 domain	1e-04
cd11775	57	cd11775, SH3_Sla1p_3, Third Src Homology 3 domain	1e-04
cd11808	53	cd11808, SH3_Alpha_Spectrin, Src homology 3 domain	1e-04
cd11888	54	cd11888, SH3_ARHGAP9_like, Src Homology 3 domain o	1e-04
cd11777	55	cd11777, SH3_CIP4_Bzz1_like, Src Homology 3 domain	1e-04
cd10364	101	cd10364, SH2_Src_Lyn, Src homology 2 (SH2) domain	1e-04
cd11992	52	cd11992, SH3_Intersectin2_3, Third Src homology 3	1e-04
cd11901	55	cd11901, SH3_Nck1_2, Second Src Homology 3 domain	1e-04
cd11849	53	cd11849, SH3_SPIN90, Src homology 3 domain of SH3	2e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-04
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	2e-04
cd11842	55	cd11842, SH3_Ysc84p_like, Src homology 3 domain of	2e-04
cd11824	53	cd11824, SH3_PSTPIP1, Src homology 3 domain of Pro	2e-04
cd09935	94	cd09935, SH2_ABL, Src homology 2 (SH2) domain foun	2e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	2e-04
cd09927	116	cd09927, SH2_Tensin_like, Src homology 2 domain fo	2e-04
cd11819	54	cd11819, SH3_Cortactin_like, Src homology 3 domain	2e-04
cd12024	53	cd12024, SH3_NoxO1_2, Second or C-terminal Src hom	2e-04
cd11951	53	cd11951, SH3_GRAP_C, C-terminal Src homology 3 dom	2e-04
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	2e-04
cd11873	53	cd11873, SH3_CD2AP-like_1, First Src Homology 3 do	2e-04
cd10367	101	cd10367, SH2_Src_Fgr, Src homology 2 (SH2) domain	3e-04
cd11964	55	cd11964, SH3_STAM1, Src homology 3 domain of Signa	3e-04
cd10368	101	cd10368, SH2_Src_Fyn, Src homology 2 (SH2) domain	3e-04
cd10360	79	cd10360, SH2_Srm, Src homology 2 (SH2) domain foun	3e-04
cd12011	55	cd12011, SH3_SLAP2, Src homology 3 domain of Src-L	3e-04
cd12069	57	cd12069, SH3_ARHGAP27, Src Homology 3 domain of Rh	3e-04
cd11925	57	cd11925, SH3_SH3RF3_3, Third Src Homology 3 domain	3e-04
cd09942	110	cd09942, SH2_nSH2_p85_like, N-terminal Src homolog	3e-04
cd09931	99	cd09931, SH2_C-SH2_SHP_like, C-terminal Src homolo	3e-04
cd11774	52	cd11774, SH3_Sla1p_2, Second Src Homology 3 domain	3e-04
cd11830	54	cd11830, SH3_VAV_2, C-terminal (or second) Src hom	3e-04
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	4e-04
cd10419	101	cd10419, SH2_Src_Fyn_isoform_b_like, Src homology	4e-04
cd10344	104	cd10344, SH2_SLAP, Src homology 2 domain found in	4e-04
cd10364	101	cd10364, SH2_Src_Lyn, Src homology 2 (SH2) domain	4e-04
cd12072	57	cd12072, SH3_FNBP1L, Src Homology 3 domain of Form	4e-04
cd09938	104	cd09938, SH2_N-SH2_Zap70_Syk_like, N-terminal Src	4e-04
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	5e-04
cd12007	58	cd12007, SH3_Yes, Src homology 3 domain of Yes Pro	5e-04
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	5e-04
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	5e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	5e-04
pfam07653	53	pfam07653, SH3_2, Variant SH3 domain	5e-04
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	5e-04
cd10388	101	cd10388, SH2_SOCS7, Src homology 2 (SH2) domain fo	5e-04
cd11882	54	cd11882, SH3_GRAF-like, Src Homology 3 domain of G	5e-04
cd11764	54	cd11764, SH3_Eps8, Src Homology 3 domain of Epider	6e-04
cd11770	54	cd11770, SH3_Nephrocystin, Src Homology 3 domain o	6e-04
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	6e-04
cd11773	57	cd11773, SH3_Sla1p_1, First Src Homology 3 domain	6e-04
cd11903	59	cd11903, SH3_Nck2_3, Third Src Homology 3 domain o	7e-04
cd09925	104	cd09925, SH2_SHC, Src homology 2 (SH2) domain foun	7e-04
cd11960	54	cd11960, SH3_Abp1_eu, Src homology 3 domain of eum	7e-04
cd09942	110	cd09942, SH2_nSH2_p85_like, N-terminal Src homolog	8e-04
cd12016	54	cd12016, SH3_Tks_2, Second Src homology 3 domain o	8e-04
cd12065	54	cd12065, SH3_GRAF2, Src Homology 3 domain of GTPas	8e-04
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	9e-04
cd11820	54	cd11820, SH3_STAM, Src homology 3 domain of Signal	9e-04
cd11826	52	cd11826, SH3_Abi, Src homology 3 domain of Abl Int	9e-04
cd11988	57	cd11988, SH3_Intersectin2_1, First Src homology 3	9e-04
cd10341	99	cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src	9e-04
cd11850	56	cd11850, SH3_Abl, Src homology 3 domain of the Pro	9e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	0.001
cd11949	53	cd11949, SH3_GRB2_C, C-terminal Src homology 3 dom	0.001
cd11805	53	cd11805, SH3_GRB2_like_C, C-terminal Src homology	0.001
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	0.001
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	0.001
cd11888	54	cd11888, SH3_ARHGAP9_like, Src Homology 3 domain o	0.001
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	0.001
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	0.001
cd10337	136	cd10337, SH2_BCAR3, Src homology 2 (SH2) domain in	0.001
cd12064	56	cd12064, SH3_GRAF, Src Homology 3 domain of GTPase	0.001
cd09943	93	cd09943, SH2_Nck_family, Src homology 2 (SH2) doma	0.001
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	0.002
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	0.002
cd11887	60	cd11887, SH3_Bbc1, Src Homology 3 domain of Bbc1 a	0.002
cd11992	52	cd11992, SH3_Intersectin2_3, Third Src homology 3	0.002
cd12017	53	cd12017, SH3_Tks_3, Third Src homology 3 domain of	0.002
cd11848	55	cd11848, SH3_SLAP-like, Src homology 3 domain of S	0.002
cd11838	52	cd11838, SH3_Intersectin_3, Third Src homology 3 d	0.002
cd09944	108	cd09944, SH2_Grb7_family, Src homology 2 (SH2) dom	0.002
cd10402	105	cd10402, SH2_C-SH2_Zap70, C-terminal Src homology	0.002
cd10361	90	cd10361, SH2_Fps_family, Src homology 2 (SH2) doma	0.002
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	0.002
cd11969	55	cd11969, SH3_PLCgamma2, Src homology 3 domain of P	0.002
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	0.003
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.003
cd11926	55	cd11926, SH3_SH3RF1_3, Third Src Homology 3 domain	0.003
cd11999	56	cd11999, SH3_PACSIN_like, Src homology 3 domain of	0.003
cd11784	55	cd11784, SH3_SH3RF2_3, Third Src Homology 3 domain	0.003
cd11978	56	cd11978, SH3_VAV3_2, C-terminal (or second) Src ho	0.003
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	0.003
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	0.003
cd12006	56	cd12006, SH3_Fyn_Yrk, Src homology 3 domain of Fyn	0.004
cd12076	54	cd12076, SH3_Tks4_2, Second Src homology 3 domain	0.004
cd10362	101	cd10362, SH2_Src_Lck, Src homology 2 (SH2) domain	0.004
cd10392	98	cd10392, SH2_SHF, Src homology 2 domain found in S	0.004
cd11961	53	cd11961, SH3_Abp1_fungi_C2, Second C-terminal Src	0.004
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	0.004
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	0.004
cd10358	100	cd10358, SH2_PTK6_Brk, Src homology 2 domain found	0.004
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	0.004
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	0.004
cd11976	54	cd11976, SH3_VAV1_2, C-terminal (or second) Src ho	0.004
cd12061	54	cd12061, SH3_betaPIX, Src Homology 3 domain of bet	0.004
cd09937	98	cd09937, SH2_csk_like, Src homology 2 (SH2) domain	0.004
cd11977	58	cd11977, SH3_VAV2_2, C-terminal (or second) Src ho	0.004

>gnl|CDD|198188 cd09934, SH2_Tec_family, Src homology 2 (SH2) domain found in Tec-like proteins

 Score =  152 bits (386), Expect = 1e-44
 Identities = 77/155 (49%), Positives = 88/155 (56%), Gaps = 59/155 (38%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPH-PHVKHYHIKQNSRG 315
           WYVGDMSRQRAES+LKQEDKEGCFVVRNSSTKGLYT+SL+TKVP  PHVKHYHIKQN+R 
Sbjct: 8   WYVGDMSRQRAESLLKQEDKEGCFVVRNSSTKGLYTVSLFTKVPGSPHVKHYHIKQNARS 67

Query: 316 EFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEF 375
           EF+L+EKHC  +IPE                               + +YH         
Sbjct: 68  EFYLAEKHCFETIPE-------------------------------LINYH--------- 87

Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCD 410
                             +HNSGGLA+RLK   CD
Sbjct: 88  ------------------QHNSGGLATRLKYPVCD 104

The Tec protein tyrosine kinase is the founding member of a family that includes Btk, Itk, Bmx, and Txk. The members have a PH domain, a zinc-binding motif, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. Btk is involved in B-cell receptor signaling with mutations in Btk responsible for X-linked agammaglobulinemia (XLA) in humans and X-linked immunodeficiency (xid) in mice. Itk is involved in T-cell receptor signaling. Tec is expressed in both T and B cells, and is thought to function in activated and effector T lymphocytes to induce the expression of genes regulated by NFAT transcription factors. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score =  152 bits (385), Expect = 1e-42
 Identities = 59/79 (74%), Positives = 67/79 (84%), Gaps = 2/79 (2%)

Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQN 483
           IDP+EL  L+ELGSGQFGVV  GKWRG IDVA  M++EG MSEDDFIEEAKVM +L H N
Sbjct: 1   IDPSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPN 60

Query: 484 LVQLYGVCSKHRPIYIVTD 502
           LVQLYGVC+K RPI+IVT+
Sbjct: 61  LVQLYGVCTKQRPIFIVTE 79

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score =  129 bits (325), Expect = 4e-34
 Identities = 56/79 (70%), Positives = 67/79 (84%), Gaps = 2/79 (2%)

Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQN 483
           IDP +L  L+ELG+GQFGVV+ GKWRG  DVA  M+KEG+MSED+FIEEAKVM +L H+ 
Sbjct: 1   IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEK 60

Query: 484 LVQLYGVCSKHRPIYIVTD 502
           LVQLYGVC+K RPIYIVT+
Sbjct: 61  LVQLYGVCTKQRPIYIVTE 79

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score =  122 bits (307), Expect = 1e-31
 Identities = 50/79 (63%), Positives = 63/79 (79%), Gaps = 2/79 (2%)

Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQN 483
           I+P+EL  ++ELGSGQFGVV  GKWR  I VA+  + EG MSE+DFIEEAKVM +L H  
Sbjct: 1   INPSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPK 60

Query: 484 LVQLYGVCSKHRPIYIVTD 502
           LVQLYGVC++ +P+YIVT+
Sbjct: 61  LVQLYGVCTQQKPLYIVTE 79

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  115 bits (289), Expect = 5e-29
 Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 2/81 (2%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQH 481
           WEI    L L  +LG+GQFG V  G W G+  VA+  +K GTMS + F++EA++M +L+H
Sbjct: 1   WEIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRH 60

Query: 482 QNLVQLYGVCSKHRPIYIVTD 502
             LVQLY VCS+  PIYIVT+
Sbjct: 61  DKLVQLYAVCSEEEPIYIVTE 81

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|212702 cd11768, SH3_Tec_like, Src Homology 3 domain of Tec-like Protein Tyrosine Kinases

 Score =  106 bits (266), Expect = 2e-28
 Identities = 37/54 (68%), Positives = 44/54 (81%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           +VVALY F+ IE GDL LEKG EY V+DD+ EHWW+ +DKNG+ GYIPSNYV E
Sbjct: 1   IVVALYDFQPIEPGDLPLEKGEEYVVLDDSNEHWWRARDKNGNEGYIPSNYVTE 54

The Tec (Tyrosine kinase expressed in hepatocellular carcinoma) subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. They are cytoplasmic (or nonreceptor) tyr kinases containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score =  105 bits (263), Expect = 2e-25
 Identities = 34/54 (62%), Positives = 43/54 (79%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           +V +Y+RFSSKSDVW++GVLMWEVF+ GKMPY R  N+EVV+ V  G  L +PK
Sbjct: 171 EVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPK 224

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score =  104 bits (262), Expect = 2e-25
 Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 2/81 (2%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQH 481
           WEID   + LL +LG+GQFG V  G W  +  VA+  +K GTM   DF+ EA++M +L+H
Sbjct: 1   WEIDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRH 60

Query: 482 QNLVQLYGVCSKHRPIYIVTD 502
             L+QLY VC+   PIYIVT+
Sbjct: 61  PKLIQLYAVCTLEEPIYIVTE 81

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  102 bits (258), Expect = 9e-25
 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 9/80 (11%)

Query: 431 LMLLEELGSGQFGVVRRGKWRGS-----IDVA--MMKEGTMSED--DFIEEAKVMTRLQH 481
           L L ++LG G FG V +G  +G        VA   +KEG   E+  +F+EEA +M +L H
Sbjct: 1   LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSH 60

Query: 482 QNLVQLYGVCSKHRPIYIVT 501
            N+V+L GVC++  P+YIVT
Sbjct: 61  PNIVRLLGVCTQGEPLYIVT 80

Length = 258

>gnl|CDD|198259 cd10396, SH2_Tec_Itk, Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)

 Score = 96.8 bits (241), Expect = 3e-24
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 57/156 (36%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 316
           WY  +++R +AE +L+ E KEG F+VR+SS  GLYT+SLYTK                  
Sbjct: 8   WYNKNINRSKAEKLLRDEGKEGGFMVRDSSQPGLYTVSLYTK------------------ 49

Query: 317 FFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQ--NSRGE 374
               E + C                                    ++HYHIK+  +S  +
Sbjct: 50  -AGGEGNPC------------------------------------IRHYHIKETNDSPKK 72

Query: 375 FFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCD 410
           ++L+EKH  +SIPE++ YH+HN+ GL +RL+     
Sbjct: 73  YYLAEKHVFNSIPELIEYHKHNAAGLVTRLRYPVSS 108

A member of the Tec protein tyrosine kinase Itk is expressed thymus, spleen, lymph node, T lymphocytes, NK and mast cells. It plays a role in T-cell proliferation and differentiation, analogous to Tec family kinases Txk. Itk has been shown to interact with Fyn, Wiskott-Aldrich syndrome protein, KHDRBS1, PLCG1, Lymphocyte cytosolic protein 2, Linker of activated T cells, Karyopherin alpha 2, Grb2, and Peptidylprolyl isomerase A. Most of the Tec family members have a PH domain (Txk and the short (type 1) splice variant of Drosophila Btk29A are exceptions), a Tec homology (TH) domain, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. The TH domain consists of a Zn2+-binding Btk motif and a proline-rich region. The Btk motif is found in Tec kinases, Ras GAP, and IGBP. It is crucial for the function of Tec PH domains and it's lack of presence in Txk is not surprising since it lacks a PH domain. The type 1 splice form of the Drosophila homolog also lacks both the PH domain and the Btk motif. The proline-rich regions are highly conserved for the most part with the exception of Bmx whose residues surrounding the PXXP motif are not conserved (TH-like) and Btk29A which is entirely unique with large numbers of glycine residues (TH-extended). Tec family members all lack a C-terminal tyrosine having an autoinhibitory function in its phosphorylated state. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 99.3 bits (247), Expect = 2e-23
 Identities = 43/77 (55%), Positives = 57/77 (74%), Gaps = 2/77 (2%)

Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQN 483
           I P+EL L++E+GSGQFG+V  G W     VA+  ++EG MSE+DFIEEA+VM +L H  
Sbjct: 1   IHPSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPK 60

Query: 484 LVQLYGVCSKHRPIYIV 500
           LVQLYGVC++  PI +V
Sbjct: 61  LVQLYGVCTERSPICLV 77

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 94.2 bits (235), Expect = 1e-21
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 9/80 (11%)

Query: 431 LMLLEELGSGQFGVVRRGKWRG-----SIDVA--MMKEGTMSED--DFIEEAKVMTRLQH 481
           L L ++LG G FG V +G  +G      ++VA   +KE    +   +F+ EA++M +L H
Sbjct: 1   LTLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDH 60

Query: 482 QNLVQLYGVCSKHRPIYIVT 501
            N+V+L GVC++  P+ IV 
Sbjct: 61  PNIVKLLGVCTEEEPLMIVM 80

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 92.6 bits (231), Expect = 3e-21
 Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 9/78 (11%)

Query: 433 LLEELGSGQFGVVRRGKWRG-----SIDVA--MMKEGTMSED--DFIEEAKVMTRLQHQN 483
           L ++LG G FG V +GK +G      ++VA   +KE    +   +F+ EA++M +L H N
Sbjct: 3   LGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 484 LVQLYGVCSKHRPIYIVT 501
           +V+L GVC++  P+YIV 
Sbjct: 63  VVKLLGVCTEEEPLYIVM 80

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|198262 cd10399, SH2_Tec_Bmx, Src homology 2 (SH2) domain found in Tec protein, Bmx

 Score = 86.5 bits (214), Expect = 1e-20
 Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 55/149 (36%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 316
           W+ G++SR ++E +L+Q+ KEG F+VRNSS  G+YT+SL++K                  
Sbjct: 8   WFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKA----------------- 50

Query: 317 FFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFF 376
                         V DK+G                         VKHYH+  N+  + +
Sbjct: 51  --------------VNDKKGT------------------------VKHYHVHTNAENKLY 72

Query: 377 LSEKHCCHSIPEVVNYHRHNSGGLASRLK 405
           L+E +C  SIP++++YH+HNS G+ +RL+
Sbjct: 73  LAENYCFDSIPKLIHYHQHNSAGMITRLR 101

A member of the Tec protein tyrosine kinase Bmx is expressed in the endothelium of large arteries, fetal endocardium, adult endocardium of the left ventricle, bone marrow, lung, testis, granulocytes, myeloid cell lines, and prostate cell lines. Bmx is involved in the regulation of Rho and serum response factor (SRF). Bmx has been shown to interact with PAK1, PTK2, PTPN21, and RUFY1. Most of the Tec family members have a PH domain (Txk and the short (type 1) splice variant of Drosophila Btk29A are exceptions), a Tec homology (TH) domain, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. The TH domain consists of a Zn2+-binding Btk motif and a proline-rich region. The Btk motif is found in Tec kinases, Ras GAP, and IGBP. It is crucial for the function of Tec PH domains. It is not present in Txk and the type 1 splice form of the Drosophila homolog. The proline-rich regions are highly conserved for the most part with the exception of Bmx whose residues surrounding the PXXP motif are not conserved (TH-like) and Btk29A which is entirely unique with large numbers of glycine residues (TH-extended). Tec family members all lack a C-terminal tyrosine having an autoinhibitory function in its phosphorylated state. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|198260 cd10397, SH2_Tec_Btk, Src homology 2 (SH2) domain found in Tec protein, Bruton's tyrosine kinase (Btk)

 Score = 85.3 bits (211), Expect = 3e-20
 Identities = 34/77 (44%), Positives = 53/77 (68%), Gaps = 3/77 (3%)

Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           + KEG F+VR+SS  G YT+S++ K    P   ++HY +    + +++L+EKH   +IPE
Sbjct: 25  EGKEGGFIVRDSSKAGKYTVSVFAKSAGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPE 84

Query: 389 VVNYHRHNSGGLASRLK 405
           ++NYH+HN+ GL SRLK
Sbjct: 85  LINYHQHNAAGLISRLK 101

A member of the Tec protein tyrosine kinase Btk is expressed in bone marrow, spleen, all hematopoietic cells except T lymphocytes and plasma cells where it plays a crucial role in B cell maturation and mast cell activation. Btk has been shown to interact with GNAQ, PLCG2, protein kinase D1, B-cell linker, SH3BP5, caveolin 1, ARID3A, and GTF2I. Most of the Tec family members have a PH domain (Txk and the short (type 1) splice variant of Drosophila Btk29A are exceptions), a Tec homology (TH) domain, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. Btk is implicated in the primary immunodeficiency disease X-linked agammaglobulinemia (Bruton's agammaglobulinemia). The TH domain consists of a Zn2+-binding Btk motif and a proline-rich region. The Btk motif is found in Tec kinases, Ras GAP, and IGBP. It is crucial for the function of Tec PH domains and it's lack of presence in Txk is not surprising since it lacks a PH domain. The type 1 splice form of the Drosophila homolog also lacks both the PH domain and the Btk motif. The proline-rich regions are highly conserved for the most part with the exception of Bmx whose residues surrounding the PXXP motif are not conserved (TH-like) and Btk29A which is entirely unique with large numbers of glycine residues (TH-extended). Tec family members all lack a C-terminal tyrosine having an autoinhibitory function in its phosphorylated state. Two tyrosine phosphorylation (pY) sites have been identified in Btk: one located in the activation loop of the catalytic domain which regulates the transition between open (active) and closed (inactive) states and the other in its SH3 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 89.3 bits (221), Expect = 6e-20
 Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 3/84 (3%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQH 481
           WEI    L L+++LG+GQFG V  G W G+  VA+  +K GTMS + F+EEA++M +L+H
Sbjct: 1   WEIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRH 60

Query: 482 QNLVQLYGVCSKHRPIYIVTDTSS 505
             LVQLY V S+  PIYIVT+  S
Sbjct: 61  DKLVQLYAVVSE-EPIYIVTEYMS 83

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 88.7 bits (221), Expect = 7e-20
 Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 8/75 (10%)

Query: 435 EELGSGQFGVVRRGKWRG----SIDVA--MMKEGTMSED--DFIEEAKVMTRLQHQNLVQ 486
           ++LG G FG V +GK +G    + +VA   +KE    E+  DF++EA+VM +L H N+V+
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 487 LYGVCSKHRPIYIVT 501
           L GVC++  P+Y+V 
Sbjct: 61  LLGVCTEEEPLYLVL 75

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 87.8 bits (218), Expect = 2e-19
 Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 1/80 (1%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRG-SIDVAMMKEGTMSEDDFIEEAKVMTRLQHQ 482
           W I+  EL L   +G G+FG V  G +RG  + V  +K+ + +   F+ EA VMT L+H 
Sbjct: 1   WAINSKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHP 60

Query: 483 NLVQLYGVCSKHRPIYIVTD 502
           NLVQL GV  +  P+YIVT+
Sbjct: 61  NLVQLLGVVLQGNPLYIVTE 80

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|198261 cd10398, SH2_Tec_Txk, Src homology 2 (SH2) domain found in Tec protein, Txk

 Score = 83.1 bits (205), Expect = 2e-19
 Identities = 34/77 (44%), Positives = 54/77 (70%), Gaps = 3/77 (3%)

Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVPHPH---VKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           + KEG F+VR+S   G YT+S++T+        +KHY IK+N  G+++++E+H   SIPE
Sbjct: 25  ESKEGAFIVRDSRHLGSYTISVFTRARRSTEASIKHYQIKKNDSGQWYVAERHLFQSIPE 84

Query: 389 VVNYHRHNSGGLASRLK 405
           ++ YH+HN+ GL SRL+
Sbjct: 85  LIQYHQHNAAGLMSRLR 101

A member of the Tec protein tyrosine kinase Txk is expressed in thymus, spleen, lymph node, T lymphocytes, NK cells, mast cell lines, and myeloid cell line. Txk plays a role in TCR signal transduction, T cell development, and selection which is analogous to the function of Itk. Txk has been shown to interact with IFN-gamma. Unlike most of the Tec family members Txk lacks a PH domain. Instead Txk has a unique region containing a palmitoylated cysteine string which has a similar membrane tethering function as the PH domain. Txk also has a zinc-binding motif, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. The TH domain consists of a Zn2+-binding Btk motif and a proline-rich region. The Btk motif is found in Tec kinases, Ras GAP, and IGBP and crucial to the function of the PH domain. It is not present in Txk which is not surprising since it lacks a PH domain. The type 1 splice form of the Drosophila homolog also lacks both the PH domain and the Btk motif. The proline-rich regions are highly conserved for the most part with the exception of Bmx whose residues surrounding the PXXP motif are not conserved (TH-like) and Btk29A which is entirely unique with large numbers of glycine residues (TH-extended). Tec family members all lack a C-terminal tyrosine having an autoinhibitory function in its phosphorylated state. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|198260 cd10397, SH2_Tec_Btk, Src homology 2 (SH2) domain found in Tec protein, Bruton's tyrosine kinase (Btk)

 Score = 81.8 bits (202), Expect = 7e-19
 Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 3/78 (3%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQNS 313
           WY  +M+R +AE +LKQE KEG F+VR+SS  G YT+S++ K    P   ++HY +    
Sbjct: 8   WYSKNMTRSQAEQLLKQEGKEGGFIVRDSSKAGKYTVSVFAKSAGDPQGVIRHYVVCSTP 67

Query: 314 RGEFFLSEKHCCHSIPEV 331
           + +++L+EKH   +IPE+
Sbjct: 68  QSQYYLAEKHLFSTIPEL 85

A member of the Tec protein tyrosine kinase Btk is expressed in bone marrow, spleen, all hematopoietic cells except T lymphocytes and plasma cells where it plays a crucial role in B cell maturation and mast cell activation. Btk has been shown to interact with GNAQ, PLCG2, protein kinase D1, B-cell linker, SH3BP5, caveolin 1, ARID3A, and GTF2I. Most of the Tec family members have a PH domain (Txk and the short (type 1) splice variant of Drosophila Btk29A are exceptions), a Tec homology (TH) domain, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. Btk is implicated in the primary immunodeficiency disease X-linked agammaglobulinemia (Bruton's agammaglobulinemia). The TH domain consists of a Zn2+-binding Btk motif and a proline-rich region. The Btk motif is found in Tec kinases, Ras GAP, and IGBP. It is crucial for the function of Tec PH domains and it's lack of presence in Txk is not surprising since it lacks a PH domain. The type 1 splice form of the Drosophila homolog also lacks both the PH domain and the Btk motif. The proline-rich regions are highly conserved for the most part with the exception of Bmx whose residues surrounding the PXXP motif are not conserved (TH-like) and Btk29A which is entirely unique with large numbers of glycine residues (TH-extended). Tec family members all lack a C-terminal tyrosine having an autoinhibitory function in its phosphorylated state. Two tyrosine phosphorylation (pY) sites have been identified in Btk: one located in the activation loop of the catalytic domain which regulates the transition between open (active) and closed (inactive) states and the other in its SH3 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 84.9 bits (211), Expect = 2e-18
 Identities = 25/53 (47%), Positives = 38/53 (71%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
            L   +F+SKSDVW++GVL+WE+FT G+ PY  + N EV++ +++G  L KP 
Sbjct: 175 SLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPP 227

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 84.9 bits (211), Expect = 2e-18
 Identities = 24/53 (45%), Positives = 37/53 (69%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
            L   +F+SKSDVW++GVL+WE+FT G+ PY  + N EV++ ++ G  L +P 
Sbjct: 174 SLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPP 226

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|215658 pfam00017, SH2, SH2 domain

 Score = 78.4 bits (194), Expect = 4e-18
 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           WY G +SR+ AE +L     +G F+VR S S  G YTLS+        VKHY I+    G
Sbjct: 1   WYHGKISREEAERLLLNPKPDGTFLVRESESKPGDYTLSVRDDG---RVKHYRIQSLDNG 57

Query: 316 EFFLSEKHCCHSIPE 330
            +++S     +S+PE
Sbjct: 58  GYYISGGVTFNSLPE 72

Length = 77

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 83.7 bits (208), Expect = 5e-18
 Identities = 24/53 (45%), Positives = 38/53 (71%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
            L   +F+SKSDVW++GVL+WE+FT G+ PY  + N EV++ ++ G  L +P+
Sbjct: 175 SLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPE 227

Length = 258

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 83.4 bits (206), Expect = 5e-18
 Identities = 36/81 (44%), Positives = 55/81 (67%), Gaps = 3/81 (3%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQH 481
           WE+    L L+++LG+GQFG V  G + G   VA+  +K+G+MS + F+ EA +M +LQH
Sbjct: 1   WEVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQH 60

Query: 482 QNLVQLYGVCSKHRPIYIVTD 502
             LV+LY V ++  PIYI+T+
Sbjct: 61  PRLVRLYAVVTQ-EPIYIITE 80

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|198261 cd10398, SH2_Tec_Txk, Src homology 2 (SH2) domain found in Tec protein, Txk

 Score = 78.8 bits (194), Expect = 7e-18
 Identities = 33/78 (42%), Positives = 54/78 (69%), Gaps = 3/78 (3%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPH---VKHYHIKQNS 313
           WY  +++R +AE +L+QE KEG F+VR+S   G YT+S++T+        +KHY IK+N 
Sbjct: 8   WYHKNITRNQAERLLRQESKEGAFIVRDSRHLGSYTISVFTRARRSTEASIKHYQIKKND 67

Query: 314 RGEFFLSEKHCCHSIPEV 331
            G+++++E+H   SIPE+
Sbjct: 68  SGQWYVAERHLFQSIPEL 85

A member of the Tec protein tyrosine kinase Txk is expressed in thymus, spleen, lymph node, T lymphocytes, NK cells, mast cell lines, and myeloid cell line. Txk plays a role in TCR signal transduction, T cell development, and selection which is analogous to the function of Itk. Txk has been shown to interact with IFN-gamma. Unlike most of the Tec family members Txk lacks a PH domain. Instead Txk has a unique region containing a palmitoylated cysteine string which has a similar membrane tethering function as the PH domain. Txk also has a zinc-binding motif, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. The TH domain consists of a Zn2+-binding Btk motif and a proline-rich region. The Btk motif is found in Tec kinases, Ras GAP, and IGBP and crucial to the function of the PH domain. It is not present in Txk which is not surprising since it lacks a PH domain. The type 1 splice form of the Drosophila homolog also lacks both the PH domain and the Btk motif. The proline-rich regions are highly conserved for the most part with the exception of Bmx whose residues surrounding the PXXP motif are not conserved (TH-like) and Btk29A which is entirely unique with large numbers of glycine residues (TH-extended). Tec family members all lack a C-terminal tyrosine having an autoinhibitory function in its phosphorylated state. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 83.0 bits (205), Expect = 9e-18
 Identities = 33/82 (40%), Positives = 54/82 (65%), Gaps = 3/82 (3%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVMTRLQ 480
           WE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM  ++
Sbjct: 1   WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 60

Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
           H NLVQL GVC++  P YI+T+
Sbjct: 61  HPNLVQLLGVCTREPPFYIITE 82

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 81.8 bits (202), Expect = 2e-17
 Identities = 32/54 (59%), Positives = 44/54 (81%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           +VL Y++FSSKSDVWA+GVLMWEV++ GKMPY R  N+E V++V +G+ L +P 
Sbjct: 171 EVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPH 224

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 81.8 bits (203), Expect = 2e-17
 Identities = 26/53 (49%), Positives = 37/53 (69%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
            L    F+SKSDVW++GVL+WE+FT G  PY  L N EV++ +++G  L KP+
Sbjct: 178 SLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPE 230

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|212838 cd11905, SH3_Tec, Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)

 Score = 75.6 bits (186), Expect = 3e-17
 Identities = 29/56 (51%), Positives = 37/56 (66%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
           ++VVA+Y F+  E  DL LE G EY +++    HWWK +DK G  GYIPSNYV  K
Sbjct: 1   EIVVAMYDFQPTEPHDLRLETGEEYVILEKNDVHWWKARDKYGKEGYIPSNYVTGK 56

Tec is a cytoplasmic (or nonreceptor) tyr kinase containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. It also contains an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation, and the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. It is more widely-expressed than other Tec subfamily kinases. Tec is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Tec is a key component of T-cell receptor (TCR) signaling, and is important in TCR-stimulated proliferation, IL-2 production and phospholipase C-gamma1 activation. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|214585 smart00252, SH2, Src homology 2 domains

 Score = 74.2 bits (183), Expect = 1e-16
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 5/75 (6%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           WY G +SR+ AE +LK E  +G F+VR+S +  G Y LS+  K     VKHY I++N  G
Sbjct: 3   WYHGFISREEAEKLLKNEG-DGDFLVRDSESSPGDYVLSVRVK---GKVKHYRIRRNEDG 58

Query: 316 EFFLSEKHCCHSIPE 330
           +F+L       S+ E
Sbjct: 59  KFYLEGGRKFPSLVE 73

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae. Length = 84

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 78.7 bits (194), Expect = 2e-16
 Identities = 31/54 (57%), Positives = 43/54 (79%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           +V N++++SSKSDVW++GVLMWEVFT GKMP+ +  N EVV+ + RG  L +PK
Sbjct: 171 EVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPK 224

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 78.9 bits (194), Expect = 2e-16
 Identities = 41/81 (50%), Positives = 54/81 (66%), Gaps = 3/81 (3%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQH 481
           WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++EA+VM +L+H
Sbjct: 1   WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH 60

Query: 482 QNLVQLYGVCSKHRPIYIVTD 502
           + LVQLY V S+  PIYIVT+
Sbjct: 61  EKLVQLYAVVSE-EPIYIVTE 80

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 78.9 bits (194), Expect = 2e-16
 Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 2/81 (2%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQH 481
           WEI    + L+++LG+GQFG V  G +  S  VA+  +K GTMS   F+EEA +M  LQH
Sbjct: 1   WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQH 60

Query: 482 QNLVQLYGVCSKHRPIYIVTD 502
             LV+LY V +K  PIYI+T+
Sbjct: 61  DKLVRLYAVVTKEEPIYIITE 81

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 78.6 bits (194), Expect = 3e-16
 Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 3/82 (3%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA---MMKEGTMSEDDFIEEAKVMTRLQ 480
           WE    E  L  +LGSG FG V  G W+  + VA   +  +  + + DF +E + + RL+
Sbjct: 1   WERPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLR 60

Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
           H++L+ L+ VCS   P+YI+T+
Sbjct: 61  HKHLISLFAVCSVGEPVYIITE 82

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|214620 smart00326, SH3, Src homology 3 domains

 Score = 72.2 bits (178), Expect = 3e-16
 Identities = 20/56 (35%), Positives = 30/56 (53%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
               V ALY + A +  +LS +KG    V++ + + WWK +   G  G  PSNYV+
Sbjct: 1   EGPQVRALYDYTAQDPDELSFKKGDIITVLEKSDDGWWKGRLGRGKEGLFPSNYVE 56

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations. Length = 56

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 73.6 bits (181), Expect = 1e-14
 Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M +G LLNYLR  +  L      LLDMC  VC+ M YLE + +IHR+
Sbjct: 81  MANGCLLNYLRERKGKL--GTEWLLDMCSDVCEAMEYLESNGFIHRD 125

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 73.3 bits (181), Expect = 1e-14
 Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M  G LL++LR+H   L   +  LL M +Q+ KGM YLE  N++HR
Sbjct: 83  MPGGDLLDFLRKHGEKL--TLKDLLQMALQIAKGMEYLESKNFVHR 126

Length = 258

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 72.7 bits (178), Expect = 2e-14
 Identities = 28/54 (51%), Positives = 41/54 (75%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           +V +++++SSKSDVW++GVLMWEVF+ GK PY    N+EVV+ +  G  L KP+
Sbjct: 171 EVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPR 224

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 72.4 bits (177), Expect = 3e-14
 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQH 481
           WEI    L L  +LG G FG V  G W G+  VA+  +K GTM  + F++EA++M +L+H
Sbjct: 1   WEIPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRH 60

Query: 482 QNLVQLYGVCSKHRPIYIVTD 502
             LV LY V S+  PIYIVT+
Sbjct: 61  DKLVPLYAVVSE-EPIYIVTE 80

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|212839 cd11906, SH3_BTK, Src Homology 3 domain of Bruton's tyrosine kinase

 Score = 66.4 bits (162), Expect = 4e-14
 Identities = 28/55 (50%), Positives = 37/55 (67%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           K VVALY +  +   DL L KG EY +++++   WW+ +DKNG  GYIPSNYV E
Sbjct: 1   KKVVALYDYTPMNAQDLQLRKGEEYVILEESNLPWWRARDKNGREGYIPSNYVTE 55

BTK is a cytoplasmic (or nonreceptor) tyr kinase containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. It also contains an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation, and the Tec homology (TH) domain with proline-rich and zinc-binding regions. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 71.6 bits (176), Expect = 6e-14
 Identities = 26/51 (50%), Positives = 36/51 (70%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +NY +FSSKSDVW+YGV +WE F+ G  PYG +K  EV+  ++ G  L +P
Sbjct: 170 INYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRP 220

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|214585 smart00252, SH2, Src homology 2 domains

 Score = 65.7 bits (161), Expect = 1e-13
 Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 4/69 (5%)

Query: 332 KDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
            + +G F+VR+S +  G Y LS+  K     VKHY I++N  G+F+L       S+ E+V
Sbjct: 19  NEGDGDFLVRDSESSPGDYVLSVRVK---GKVKHYRIRRNEDGKFYLEGGRKFPSLVELV 75

Query: 391 NYHRHNSGG 399
            +++ NS G
Sbjct: 76  EHYQKNSLG 84

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae. Length = 84

>gnl|CDD|198173 cd00173, SH2, Src homology 2 (SH2) domain

 Score = 65.9 bits (161), Expect = 1e-13
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           W+ G +SR+ AE +L+ +  +G F+VR SS+  G Y LS+  +     VKHY I++N  G
Sbjct: 2   WFHGSISREEAERLLRGK-PDGTFLVRESSSEPGDYVLSV--RSGDGKVKHYLIERNEGG 58

Query: 316 EFFL-SEKHCCHSIPEV 331
            + L        S+PE+
Sbjct: 59  YYLLGGSGRTFPSLPEL 75

In general, SH2 domains are involved in signal transduction; they bind pTyr-containing polypeptide ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. They are present in a wide array of proteins including: adaptor proteins (Nck1, Crk, Grb2), scaffolds (Slp76, Shc, Dapp1), kinases (Src, Syk, Fps, Tec), phosphatases (Shp-1, Shp-2), transcription factors (STAT1), Ras signaling molecules (Ras-Gap), ubiquitination factors (c-Cbl), cytoskeleton regulators (Tensin), signal regulators (SAP), and phospholipid second messengers (PLCgamma), amongst others. Length = 79

>gnl|CDD|215659 pfam00018, SH3_1, SH3 domain

 Score = 64.5 bits (158), Expect = 1e-13
 Identities = 20/47 (42%), Positives = 28/47 (59%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPS 175
           VALY + A E  +LS +KG    V++ + + WWK + K G  G IPS
Sbjct: 1   VALYDYTAREPDELSFKKGDIIIVLEKSDDGWWKGRLKGGKEGLIPS 47

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 47

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 69.9 bits (172), Expect = 2e-13
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M  G LL+YLR++   L  ++  LL   +Q+ +GM YLE  N+IHR
Sbjct: 83  MEGGDLLSYLRKNRPKL--SLSDLLSFALQIARGMEYLESKNFIHR 126

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|212779 cd11845, SH3_Src_like, Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases

 Score = 64.1 bits (157), Expect = 2e-13
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKN-GSVGYIPSNY 177
           + VALY ++A    DLS +KG   +++DD+   WW  +  + G  GYIPSNY
Sbjct: 1   IYVALYDYEARTDDDLSFKKGDRLQILDDSDGDWWLARHLSTGKEGYIPSNY 52

Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, Yes, and Brk. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). However, Brk lacks the N-terminal myristoylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells, and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, Lyn, and Brk show a limited expression pattern. This subfamily also includes Drosophila Src42A, Src oncogene at 42A (also known as Dsrc41) which accumulates at sites of cell-cell or cell-matrix adhesion, and participates in Drosphila development and wound healing. It has been shown to promote tube elongation in the tracheal system, is essential for proper cell-cell matching during dorsal closure, and regulates cell-cell contacts in developing Drosophila eyes. The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212841 cd11908, SH3_ITK, Src Homology 3 domain of Interleukin-2-inducible T-cell Kinase

 Score = 63.5 bits (154), Expect = 4e-13
 Identities = 24/55 (43%), Positives = 40/55 (72%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
           +V+ALY ++  +  +L+L    EY ++D ++ HWW+V+DKNG  GY+PS+Y+ EK
Sbjct: 2   LVIALYDYQTNDPQELALRYNEEYHLLDSSEIHWWRVQDKNGHEGYVPSSYLVEK 56

ITK (also known as Tsk or Emt) is a cytoplasmic (or nonreceptor) tyr kinase containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. It also contains an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation, and the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. ITK is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, ITK plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, ITK is crucial for the development of T-helper(Th)2 effector responses. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 68.9 bits (169), Expect = 5e-13
 Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 11/87 (12%)

Query: 435 EELGSGQFGVVRRGKWRGS----IDVAM--MKEGTMSE--DDFIEEAKVMTRLQHQNLVQ 486
           ++LG G FGVVRRG+W  S    I VA+  +K   +S+  DDF++EA +M  L H+NL++
Sbjct: 1   KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIR 60

Query: 487 LYGVCSKHRPIYIVTDTSSFRLGLLAD 513
           LYGV   H P+ +VT+ +   LG L D
Sbjct: 61  LYGVVLTH-PLMMVTELAP--LGSLLD 84

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 69.0 bits (169), Expect = 5e-13
 Identities = 22/50 (44%), Positives = 40/50 (80%)

Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           Y +F+++SDVW++GV++WE+FT GK P+  L N EV++ + +G +L++P+
Sbjct: 198 YRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRPR 247

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 68.1 bits (166), Expect = 1e-12
 Identities = 26/55 (47%), Positives = 38/55 (69%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
           + +NY +FSSKSDVW++GVLMWE F+ G+ PY  +K  EV   ++ G  +E P+ 
Sbjct: 168 ECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQR 222

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 67.7 bits (165), Expect = 1e-12
 Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 3/81 (3%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQH 481
           WEI    L L ++LG+GQFG V    +     VA+  MK G+MS + F+ EA VM  LQH
Sbjct: 1   WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH 60

Query: 482 QNLVQLYGVCSKHRPIYIVTD 502
             LV+L+ V +K  PIYI+T+
Sbjct: 61  DKLVKLHAVVTK-EPIYIITE 80

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 67.5 bits (165), Expect = 1e-12
 Identities = 22/54 (40%), Positives = 37/54 (68%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + LNY R++S+SDVW+YG+L+WE F+ G  PY  + N +  +R++ G  +  P+
Sbjct: 165 EALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQ 218

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|212690 cd00174, SH3, Src Homology 3 domain superfamily

 Score = 61.3 bits (150), Expect = 2e-12
 Identities = 16/51 (31%), Positives = 27/51 (52%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNY 177
              ALY ++A +  +LS +KG    V++   + WW+ +   G  G  P+NY
Sbjct: 1   YARALYDYEAQDDDELSFKKGDIITVLEKDDDGWWEGELNGGREGLFPANY 51

Src Homology 3 (SH3) domains are protein interaction domains that bind proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. Thus, they are referred to as proline-recognition domains (PRDs). SH3 domains are less selective and show more diverse specificity compared to other PRDs. They have been shown to bind peptide sequences that lack the PxxP motif; examples include the PxxDY motif of Eps8 and the RKxxYxxY sequence in SKAP55. SH3 domain containing proteins play versatile and diverse roles in the cell, including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies, among others. Many members of this superfamily are adaptor proteins that associate with a number of protein partners, facilitating complex formation and signal transduction. Length = 51

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 67.1 bits (164), Expect = 2e-12
 Identities = 24/40 (60%), Positives = 34/40 (85%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
           FS+KSDVW++GVLMWEVFT G++P+  L + EV++R+Q G
Sbjct: 195 FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG 234

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 66.4 bits (163), Expect = 3e-12
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M  G LL+YLR++      ++  LL   +Q+ +GM YLE  N+IHR
Sbjct: 83  MPGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLESKNFIHR 127

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 66.2 bits (162), Expect = 4e-12
 Identities = 23/50 (46%), Positives = 38/50 (76%)

Query: 205 NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           NY RF+ KSDVW++G+L+ E+ T G++PY  + N EV+++V+RG  + +P
Sbjct: 177 NYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRP 226

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 65.9 bits (161), Expect = 4e-12
 Identities = 22/51 (43%), Positives = 38/51 (74%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           L   +FS+KSDVW++G+L+WE+++ G++PY R+   +VV  V++G  +E P
Sbjct: 171 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAP 221

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 65.8 bits (161), Expect = 5e-12
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 8/85 (9%)

Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGS----IDVA--MMKEG--TMSEDDFIEEAKVMT 477
           IDP+ + + + +G G+FG V RG+ +      IDVA   +K G       DF+ EA +M 
Sbjct: 1   IDPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMG 60

Query: 478 RLQHQNLVQLYGVCSKHRPIYIVTD 502
           +  H N+++L GV +K RP+ I+T+
Sbjct: 61  QFDHPNIIRLEGVVTKSRPVMIITE 85

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 65.7 bits (160), Expect = 6e-12
 Identities = 23/55 (41%), Positives = 39/55 (70%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
           + +N+ +FSS+SDVW+YG+ MWE F+ G+ PY ++K  EV+  +++G  L+ P  
Sbjct: 168 ECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAE 222

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 65.8 bits (160), Expect = 7e-12
 Identities = 24/50 (48%), Positives = 42/50 (84%)

Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           Y +F+++SDVW++GV++WE+FT GK P+ +L NTEV++ + +G +LE+P+
Sbjct: 199 YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPR 248

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 65.5 bits (160), Expect = 7e-12
 Identities = 24/47 (51%), Positives = 34/47 (72%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+SK+DVW++GVL+WE+F+ G MPY    N EV++ V  G  L+ PK
Sbjct: 198 FTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPK 244

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|212699 cd11765, SH3_Nck_1, First Src Homology 3 domain of Nck adaptor proteins

 Score = 59.7 bits (145), Expect = 9e-12
 Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
            VVA Y + A    +LS++K  +  ++DD++ HWWKV++ +   GY+PSNYV
Sbjct: 1   YVVAKYDYTAQGDQELSIKKNEKLTLLDDSK-HWWKVQNSSNQTGYVPSNYV 51

Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4), which show partly overlapping functions but also bind distinct targets. Their SH3 domains are involved in recruiting downstream effector molecules, such as the N-WASP/Arp2/3 complex, which when activated induces actin polymerization that results in the production of pedestals, or protrusions of the plasma membrane. The first SH3 domain of Nck proteins preferentially binds the PxxDY sequence, which is present in the CD3e cytoplasmic tail. This binding inhibits phosphorylation by Src kinases, resulting in the downregulation of TCR surface expression. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 51

>gnl|CDD|212701 cd11767, SH3_Nck_3, Third Src Homology 3 domain of Nck adaptor proteins

 Score = 59.6 bits (145), Expect = 1e-11
 Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYVKE 180
           VVVALYPF      +LS EKG   E+++  +    WWK ++  G+ G +P NYV+ 
Sbjct: 1   VVVALYPFTGENDEELSFEKGERLEIIEKPEDDPDWWKARNALGTTGLVPRNYVEV 56

This group contains the third SH3 domain of Nck, the first SH3 domain of Caenorhabditis elegans Ced-2 (Cell death abnormality protein 2), and similar domains. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4), which show partly overlapping functions but also bind distinct targets. Their SH3 domains are involved in recruiting downstream effector molecules, such as the N-WASP/Arp2/3 complex, which when activated induces actin polymerization that results in the production of pedestals, or protrusions of the plasma membrane. The third SH3 domain of Nck appears to prefer ligands with a PxAPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. Ced-2 is a cell corpse engulfment protein that interacts with Ced-5 in a pathway that regulates the activation of Ced-10, a Rac small GTPase. Length = 56

>gnl|CDD|212783 cd11849, SH3_SPIN90, Src homology 3 domain of SH3 protein interacting with Nck, 90 kDa (SPIN90)

 Score = 59.3 bits (144), Expect = 1e-11
 Identities = 21/50 (42%), Positives = 32/50 (64%)

Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           ALY FK+ E   LS  +G  + +++ +  HWW V + +G  GY+P+NYVK
Sbjct: 4   ALYDFKSAEPNTLSFSEGETFLLLERSNAHWWLVTNHSGETGYVPANYVK 53

SPIN90 is also called NCK interacting protein with SH3 domain (NCKIPSD), Dia-interacting protein (DIP), 54 kDa vimentin-interacting protein (VIP54), or WASP-interacting SH3-domain protein (WISH). It is an F-actin binding protein that regulates actin polymerization and endocytosis. It associates with the Arp2/3 complex near actin filaments and determines filament localization at the leading edge of lamellipodia. SPIN90 is expressed in the early stages of neuronal differentiation and plays a role in regulating growth cone dynamics and neurite outgrowth. It also interacts with IRSp53 and regulates cell motility by playing a role in the formation of membrane protrusions. SPIN90 contains an N-terminal SH3 domain, a proline-rich domain, and a C-terminal VCA (verprolin-homology and cofilin-like acidic) domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 64.6 bits (157), Expect = 1e-11
 Identities = 23/54 (42%), Positives = 39/54 (72%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + LNY R+SS+SDVW++G+L+WE F+ G +PY  L N +  + +++G+ L  P+
Sbjct: 166 EALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPE 219

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 64.6 bits (157), Expect = 1e-11
 Identities = 22/51 (43%), Positives = 40/51 (78%)

Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
           Y +F+++SD+W++GV++WE+FT GK P+ +L NTE ++ + +G  LE+P+ 
Sbjct: 198 YRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRT 248

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|215658 pfam00017, SH2, SH2 domain

 Score = 59.5 bits (145), Expect = 2e-11
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
            +G F+VR S S  G YTLS+        VKHY I+    G +++S     +S+PE+V +
Sbjct: 20  PDGTFLVRESESKPGDYTLSVRDDG---RVKHYRIQSLDNGGYYISGGVTFNSLPELVEH 76

Query: 393 H 393
           +
Sbjct: 77  Y 77

Length = 77

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 64.0 bits (156), Expect = 2e-11
 Identities = 21/53 (39%), Positives = 37/53 (69%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +  ++  FS+KSDVW++G+L++E+FT G++PY  + N EV D++  G  +  P
Sbjct: 174 EAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCP 226

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|212840 cd11907, SH3_TXK, Src Homology 3 domain of TXK, also called Resting lymphocyte kinase (Rlk)

 Score = 59.2 bits (143), Expect = 2e-11
 Identities = 24/53 (45%), Positives = 34/53 (64%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V ALY F   E  +L+L++  EY +++    HWWK +D+ G+ G IPSNYV E
Sbjct: 3   VKALYDFLPREPSNLALKRAEEYLILEQYDPHWWKARDRYGNEGLIPSNYVTE 55

TXK is a cytoplasmic (or nonreceptor) tyr kinase containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. It also contains an N-terminal cysteine-rich region. Rlk is expressed in T-cells and mast cell lines, and is a key component of T-cell receptor (TCR) signaling. It is important in TCR-stimulated proliferation, IL-2 production and phospholipase C-gamma1 activation. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 63.8 bits (155), Expect = 2e-11
 Identities = 26/54 (48%), Positives = 40/54 (74%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + L + +FSSKSDVW+YGVL+WEVF+ G+ PY ++   EV + V++G  +E P+
Sbjct: 167 EALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPE 220

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 63.8 bits (155), Expect = 2e-11
 Identities = 22/53 (41%), Positives = 40/53 (75%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + L   +FS+KSDVW++G+L+WE+++ G++PY R+   +VV RV++G  ++ P
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 221

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 62.7 bits (153), Expect = 6e-11
 Identities = 21/52 (40%), Positives = 34/52 (65%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + Y +F+S SDVW++G++MWEV + G+ PY  + N +V+  V+ G  L  P 
Sbjct: 180 IAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPM 231

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 62.4 bits (152), Expect = 7e-11
 Identities = 23/50 (46%), Positives = 34/50 (68%)

Query: 205 NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
            Y RFS KSDVW++G+L+ E+ T G+MPY  + N EV+ +V +G  +  P
Sbjct: 177 LYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCP 226

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 62.0 bits (151), Expect = 1e-10
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 4/60 (6%)

Query: 195 LTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + LE I     +  ++ KSDVW+YGV +WE+ T G  PY  +   E+ D +++G  L +P
Sbjct: 178 MALESIL----HRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQP 233

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 61.0 bits (148), Expect = 2e-10
 Identities = 24/47 (51%), Positives = 34/47 (72%), Gaps = 2/47 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M +G LLNYLR+ +  L  ++  LL MC  VC+GM YLER+++IHR+
Sbjct: 81  MENGCLLNYLRQRQGKLSKDM--LLSMCQDVCEGMEYLERNSFIHRD 125

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 61.0 bits (149), Expect = 2e-10
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 6/52 (11%)

Query: 1   MRHGSLLNYLRRHENTLGGN------VGLLLDMCIQVCKGMAYLERHNYIHR 46
           M  G LL+YLR+              +  LL   IQ+ KGM YL    ++HR
Sbjct: 78  MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHR 129

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 61.2 bits (149), Expect = 2e-10
 Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 1/54 (1%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQR-GIILEKPKA 256
           L    FS  SDVW +GV +WE+FT G+ P+  L  ++++ ++ + G  LE+P+A
Sbjct: 172 LRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEA 225

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 61.6 bits (149), Expect = 2e-10
 Identities = 22/50 (44%), Positives = 40/50 (80%)

Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           Y +F+++SDVW+ GV++WE+FT GK P+ +L N EV++ + +G +L++P+
Sbjct: 196 YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPR 245

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 60.8 bits (147), Expect = 2e-10
 Identities = 23/54 (42%), Positives = 38/54 (70%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + LNY R+SS+SDVW+YG+L+WE F+ G  PY  + N +  ++V++G  +  P+
Sbjct: 164 EALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQ 217

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 22/51 (43%), Positives = 33/51 (64%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF+S SDVW +GV MWE+   G  P+  +KN +V+ R++ G  L  P
Sbjct: 180 INFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMP 230

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 59.9 bits (146), Expect = 2e-10
 Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 5/71 (7%)

Query: 437 LGSGQFGVVRRGKWRGS-IDVAM----MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVC 491
           LG G FG V   + + +   VA+     ++ +   ++ + E +++ +L H N+V+LYGV 
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 492 SKHRPIYIVTD 502
                +Y+V +
Sbjct: 61  EDENHLYLVME 71

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 60.4 bits (147), Expect = 3e-10
 Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 5/49 (10%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRE 47
           M  GSLL++L+  E   G  + L  L+DM  Q+ +GMAYLE  NYIHR+
Sbjct: 83  MSKGSLLDFLKSGE---GKKLRLPQLVDMAAQIAEGMAYLESRNYIHRD 128

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 60.6 bits (148), Expect = 3e-10
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM----MKEGTMSEDDFIEEAKVMTRLQHQNLVQL 487
           +LE+LG G FG V   + + +   VA+     K+     +  + E K++ +L+H N+V+L
Sbjct: 3   ILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRL 62

Query: 488 YGVCSKHRPIYIVTD 502
           Y V      +Y+V +
Sbjct: 63  YDVFEDEDKLYLVME 77

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 60.0 bits (145), Expect = 4e-10
 Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 3/81 (3%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAMMKEGTMSEDDFIEEAKVMTRLQHQ 482
           W ++  EL LL+ +G G+FG V  G +RG+ + V  +K    ++  F+ EA VMT+L+H 
Sbjct: 1   WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA-FLAEASVMTQLRHS 59

Query: 483 NLVQLYGVCSKHR-PIYIVTD 502
           NLVQL GV  + +  +YIVT+
Sbjct: 60  NLVQLLGVIVEEKGGLYIVTE 80

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 60.3 bits (146), Expect = 4e-10
 Identities = 24/47 (51%), Positives = 34/47 (72%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+++SDVW++GVLMWE+ T G+ PY  L N EV+  V  G  L+KP+
Sbjct: 190 FTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPE 236

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 60.2 bits (146), Expect = 5e-10
 Identities = 22/49 (44%), Positives = 35/49 (71%)

Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           Y R++++SDVWAYGV++WE+F+ G  PY  + + EV+  V+ G +L  P
Sbjct: 206 YNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCP 254

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 59.4 bits (144), Expect = 7e-10
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 5/49 (10%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRE 47
           M++GSLL YL+      G  + L  L+DM  QV  GMAYLE  NYIHR+
Sbjct: 83  MKYGSLLEYLQGGA---GRALKLPQLIDMAAQVASGMAYLEAQNYIHRD 128

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|215659 pfam00018, SH3_1, SH3 domain

 Score = 53.7 bits (130), Expect = 8e-10
 Identities = 16/40 (40%), Positives = 24/40 (60%)

Query: 76  VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           VALY + A E  +LS +KG    V++ + + WWK + K G
Sbjct: 1   VALYDYTAREPDELSFKKGDIIIVLEKSDDGWWKGRLKGG 40

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 47

>gnl|CDD|199827 cd09933, SH2_Src_family, Src homology 2 (SH2) domain found in the Src family of non-receptor tyrosine kinases

 Score = 55.3 bits (134), Expect = 9e-10
 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 4/79 (5%)

Query: 257 WYVGDMSRQRAESILKQ-EDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
           W+ G + R+ AE +L    +  G F++R S +T G Y+LS+          VKHY I++ 
Sbjct: 5   WFFGKIKRKDAEKLLLAPGNPRGTFLIRESETTPGAYSLSVRDGDDARGDTVKHYRIRKL 64

Query: 313 SRGEFFLSEKHCCHSIPEV 331
             G ++++ +    ++ E+
Sbjct: 65  DNGGYYITTRATFPTLQEL 83

The Src family kinases are nonreceptor tyrosine kinases that have been implicated in pathways regulating proliferation, angiogenesis, invasion and metastasis, and bone metabolism. It is thought that transforming ability of Src is linked to its ability to activate key signaling molecules in these pathways, rather than through direct activity. As such blocking Src activation has been a target for drug companies. Src family members can be divided into 3 groups based on their expression pattern: 1) Src, Fyn, and Yes; 2) Blk, Fgr, Hck, Lck, and Lyn; and 3) Frk-related kinases Frk/Rak and Iyk/Bsk Of these, cellular c-Src is the best studied and most frequently implicated in oncogenesis. The c-Src contains five distinct regions: a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Src exists in both active and inactive conformations. Negative regulation occurs through phosphorylation of Tyr, resulting in an intramolecular association between phosphorylated Tyr and the SH2 domain of SRC, which locks the protein in a closed conformation. Further stabilization of the inactive state occurs through interactions between the SH3 domain and a proline-rich stretch of residues within the kinase domain. Conversely, dephosphorylation of Tyr allows SRC to assume an open conformation. Full activity requires additional autophosphorylation of a Tyr residue within the catalytic domain. Loss of the negative-regulatory C-terminal segment has been shown to result in increased activity and transforming potential. Phosphorylation of the C-terminal Tyr residue by C-terminal Src kinase (Csk) and Csk homology kinase results in increased intramolecular interactions and consequent Src inactivation. Specific phosphatases, protein tyrosine phosphatase a (PTPa) and the SH-containing phosphatases SHP1/SHP2, have also been shown to take a part in Src activation. Src is also activated by direct binding of focal adhesion kinase (Fak) and Crk-associated substrate (Cas) to the SH2 domain. SRC activity can also be regulated by numerous receptor tyrosine kinases (RTKs), such as Her2, epidermal growth factor receptor (EGFR), fibroblast growth factor receptor, platelet-derived growth factor receptor (PDGFR), and vascular endothelial growth factor receptor (VEGFR). In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 8/65 (12%)

Query: 435 EELGSGQFGVVRRGKWR----GSIDVA--MMKEGTMS--EDDFIEEAKVMTRLQHQNLVQ 486
           +ELG G FG V +G +       ++VA   +K+  ++  + +F+ EA VM +L H  +V+
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 487 LYGVC 491
           L GVC
Sbjct: 61  LIGVC 65

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|212940 cd12007, SH3_Yes, Src homology 3 domain of Yes Protein Tyrosine Kinase

 Score = 54.3 bits (130), Expect = 1e-09
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKN-GSVGYIPSNYV 178
           + VALY ++A    DLS +KG  ++++++T+  WW+ +    G  GYIPSNYV
Sbjct: 2   IFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKNGYIPSNYV 54

Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 58.9 bits (143), Expect = 1e-09
 Identities = 21/47 (44%), Positives = 32/47 (68%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F++KSDVW++GV++WE+ T  + PY  L N EV+  V  G  L+ P+
Sbjct: 198 FTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPE 244

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 58.3 bits (141), Expect = 2e-09
 Identities = 23/52 (44%), Positives = 37/52 (71%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L Y +FS KSDVWA+GVL+WE+ T G  PY  +  ++V + +++G  +E+P+
Sbjct: 177 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPE 228

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|212838 cd11905, SH3_Tec, Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)

 Score = 53.3 bits (128), Expect = 2e-09
 Identities = 20/43 (46%), Positives = 28/43 (65%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           ++VVA+Y F+  E  DL LE G EY +++    HWWK +DK G
Sbjct: 1   EIVVAMYDFQPTEPHDLRLETGEEYVILEKNDVHWWKARDKYG 43

Tec is a cytoplasmic (or nonreceptor) tyr kinase containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. It also contains an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation, and the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. It is more widely-expressed than other Tec subfamily kinases. Tec is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Tec is a key component of T-cell receptor (TCR) signaling, and is important in TCR-stimulated proliferation, IL-2 production and phospholipase C-gamma1 activation. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 20/54 (37%), Positives = 39/54 (72%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + +N+  F+ KSDVW++G+L++E+ T GK+PY  + N++V+  +QRG  + + +
Sbjct: 174 EAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRME 227

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|214620 smart00326, SH3, Src homology 3 domains

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 71  RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
               V ALY + A +  +LS +KG    V++ + + WWK +   G  
Sbjct: 1   EGPQVRALYDYTAQDPDELSFKKGDIITVLEKSDDGWWKGRLGRGKE 47

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations. Length = 56

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 58.4 bits (141), Expect = 2e-09
 Identities = 21/53 (39%), Positives = 35/53 (66%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG++MWEV + G+ PY  + N +V+  ++ G  L  P
Sbjct: 179 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAP 231

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 57.3 bits (138), Expect = 4e-09
 Identities = 21/53 (39%), Positives = 34/53 (64%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW++G++MWEV + G+ PY  + N EV+  +  G  L  P
Sbjct: 180 EAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAP 232

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 57.7 bits (139), Expect = 4e-09
 Identities = 21/54 (38%), Positives = 39/54 (72%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + LNY+ +++KSDVW++GVL+WE+ + G  PY  +   E+ +++ +G  +EKP+
Sbjct: 188 ESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEKPR 241

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 57.4 bits (139), Expect = 4e-09
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 8/58 (13%)

Query: 207 TRFSSKSDVWAYGVLMWEVFT-CGKMPYGRLKNTEVVD---RVQRG----IILEKPKA 256
            +F++KSDVWA+GV +WE+ T C + PY  L + +V++      R     I L +P  
Sbjct: 207 GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPN 264

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 57.5 bits (139), Expect = 4e-09
 Identities = 18/49 (36%), Positives = 34/49 (69%)

Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           Y +F+++SD+W++GV++WE+F+ G  PY    N EV++ ++   +L  P
Sbjct: 200 YGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCP 248

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|199831 cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain found in the Fyn-related kinase (Frk)

 Score = 53.3 bits (128), Expect = 5e-09
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 5/76 (6%)

Query: 257 WYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           W+ G + R  AE  +L  E++ G F++R S S KG ++LS+        VKHY I++   
Sbjct: 5   WFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGEFSLSVLDG---GVVKHYRIRRLDE 61

Query: 315 GEFFLSEKHCCHSIPE 330
           G FFL+ +    ++ E
Sbjct: 62  GGFFLTRRKTFSTLNE 77

Frk is a member of the Src non-receptor type tyrosine kinase family of proteins. The Frk subfamily is composed of Frk/Rak and Iyk/Bsk/Gst. It is expressed primarily epithelial cells. Frk is a nuclear protein and may function during G1 and S phase of the cell cycle and suppress growth. Unlike the other Src members it lacks a glycine at position 2 of SH4 which is important for addition of a myristic acid moiety that is involved in targeting Src PTKs to cellular membranes. FRK and SHB exert similar effects when overexpressed in rat phaeochromocytoma (PC12) and beta-cells, where both induce PC12 cell differentiation and beta-cell proliferation. Under conditions that cause beta-cell degeneration these proteins augment beta-cell apoptosis. The FRK-SHB responses involve FAK and insulin receptor substrates (IRS) -1 and -2. Frk has been demonstrated to interact with retinoblastoma protein. Frk regulates PTEN protein stability by phosphorylating PTEN, which in turn prevents PTEN degradation. Frk also plays a role in regulation of embryonal pancreatic beta cell formation. Frk has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its activation loop. The tryosine involved is at the same site as the tyrosine involved in the autophosphorylation of Src. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 96

>gnl|CDD|198173 cd00173, SH2, Src homology 2 (SH2) domain

 Score = 52.5 bits (126), Expect = 7e-09
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)

Query: 334 KEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFL-SEKHCCHSIPEVVN 391
            +G F+VR SS+  G Y LS+  +     VKHY I++N  G + L        S+PE+V 
Sbjct: 20  PDGTFLVRESSSEPGDYVLSV--RSGDGKVKHYLIERNEGGYYLLGGSGRTFPSLPELVE 77

Query: 392 YH 393
           ++
Sbjct: 78  HY 79

In general, SH2 domains are involved in signal transduction; they bind pTyr-containing polypeptide ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. They are present in a wide array of proteins including: adaptor proteins (Nck1, Crk, Grb2), scaffolds (Slp76, Shc, Dapp1), kinases (Src, Syk, Fps, Tec), phosphatases (Shp-1, Shp-2), transcription factors (STAT1), Ras signaling molecules (Ras-Gap), ubiquitination factors (c-Cbl), cytoskeleton regulators (Tensin), signal regulators (SAP), and phospholipid second messengers (PLCgamma), amongst others. Length = 79

>gnl|CDD|199827 cd09933, SH2_Src_family, Src homology 2 (SH2) domain found in the Src family of non-receptor tyrosine kinases

 Score = 53.0 bits (128), Expect = 7e-09
 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 3/72 (4%)

Query: 336 GCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
           G F++R S +T G Y+LS+          VKHY I++   G ++++ +    ++ E+V +
Sbjct: 27  GTFLIRESETTPGAYSLSVRDGDDARGDTVKHYRIRKLDNGGYYITTRATFPTLQELVQH 86

Query: 393 HRHNSGGLASRL 404
           +  ++ GL  RL
Sbjct: 87  YSKDADGLCCRL 98

The Src family kinases are nonreceptor tyrosine kinases that have been implicated in pathways regulating proliferation, angiogenesis, invasion and metastasis, and bone metabolism. It is thought that transforming ability of Src is linked to its ability to activate key signaling molecules in these pathways, rather than through direct activity. As such blocking Src activation has been a target for drug companies. Src family members can be divided into 3 groups based on their expression pattern: 1) Src, Fyn, and Yes; 2) Blk, Fgr, Hck, Lck, and Lyn; and 3) Frk-related kinases Frk/Rak and Iyk/Bsk Of these, cellular c-Src is the best studied and most frequently implicated in oncogenesis. The c-Src contains five distinct regions: a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Src exists in both active and inactive conformations. Negative regulation occurs through phosphorylation of Tyr, resulting in an intramolecular association between phosphorylated Tyr and the SH2 domain of SRC, which locks the protein in a closed conformation. Further stabilization of the inactive state occurs through interactions between the SH3 domain and a proline-rich stretch of residues within the kinase domain. Conversely, dephosphorylation of Tyr allows SRC to assume an open conformation. Full activity requires additional autophosphorylation of a Tyr residue within the catalytic domain. Loss of the negative-regulatory C-terminal segment has been shown to result in increased activity and transforming potential. Phosphorylation of the C-terminal Tyr residue by C-terminal Src kinase (Csk) and Csk homology kinase results in increased intramolecular interactions and consequent Src inactivation. Specific phosphatases, protein tyrosine phosphatase a (PTPa) and the SH-containing phosphatases SHP1/SHP2, have also been shown to take a part in Src activation. Src is also activated by direct binding of focal adhesion kinase (Fak) and Crk-associated substrate (Cas) to the SH2 domain. SRC activity can also be regulated by numerous receptor tyrosine kinases (RTKs), such as Her2, epidermal growth factor receptor (EGFR), fibroblast growth factor receptor, platelet-derived growth factor receptor (PDGFR), and vascular endothelial growth factor receptor (VEGFR). In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 56.5 bits (136), Expect = 8e-09
 Identities = 22/53 (41%), Positives = 37/53 (69%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + LNY+ +++ SDVW+YGVL+WE+ + G  PY  +   E+ +++ +G  LEKP
Sbjct: 193 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 245

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 56.7 bits (137), Expect = 8e-09
 Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 11/89 (12%)

Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIEE 472
           +WE+    L L + LG G FG V + +  G        ++ V M+K+    +D  D + E
Sbjct: 6   EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSE 65

Query: 473 AKVMTRL-QHQNLVQLYGVCSKHRPIYIV 500
            ++M  + +H+N++ L GVC++  P+Y+V
Sbjct: 66  MEMMKMIGKHKNIINLLGVCTQEGPLYVV 94

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|212698 cd11764, SH3_Eps8, Src Homology 3 domain of Epidermal growth factor receptor kinase substrate 8 and similar proteins

 Score = 51.1 bits (123), Expect = 9e-09
 Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
           V  LY F A    +LS+ KG   EV+DD+++ WWKV++  G VGY+P N
Sbjct: 2   VRVLYDFTARNSKELSVLKGEYLEVLDDSRQ-WWKVRNSRGQVGYVPHN 49

This group is composed of Eps8 and Eps8-like proteins including Eps8-like 1-3, among others. These proteins contain N-terminal Phosphotyrosine-binding (PTB), central SH3, and C-terminal effector domains. Eps8 binds either Abi1 (also called E3b1) or Rab5 GTPase activating protein RN-tre through its SH3 domain. With Abi1 and Sos1, it becomes part of a trimeric complex that is required to activate Rac. Together with RN-tre, it inhibits the internalization of EGFR. The SH3 domains of Eps8 and similar proteins recognize peptides containing a PxxDY motif, instead of the classical PxxP motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|199831 cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain found in the Fyn-related kinase (Frk)

 Score = 52.2 bits (125), Expect = 1e-08
 Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%)

Query: 333 DKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN 391
           ++ G F++R S S KG ++LS+        VKHY I++   G FFL+ +    ++ E VN
Sbjct: 24  NQTGAFLIRESESQKGEFSLSVLDG---GVVKHYRIRRLDEGGFFLTRRKTFSTLNEFVN 80

Query: 392 YHRHNSGGLASRL 404
           Y+   S GL  +L
Sbjct: 81  YYTTTSDGLCVKL 93

Frk is a member of the Src non-receptor type tyrosine kinase family of proteins. The Frk subfamily is composed of Frk/Rak and Iyk/Bsk/Gst. It is expressed primarily epithelial cells. Frk is a nuclear protein and may function during G1 and S phase of the cell cycle and suppress growth. Unlike the other Src members it lacks a glycine at position 2 of SH4 which is important for addition of a myristic acid moiety that is involved in targeting Src PTKs to cellular membranes. FRK and SHB exert similar effects when overexpressed in rat phaeochromocytoma (PC12) and beta-cells, where both induce PC12 cell differentiation and beta-cell proliferation. Under conditions that cause beta-cell degeneration these proteins augment beta-cell apoptosis. The FRK-SHB responses involve FAK and insulin receptor substrates (IRS) -1 and -2. Frk has been demonstrated to interact with retinoblastoma protein. Frk regulates PTEN protein stability by phosphorylating PTEN, which in turn prevents PTEN degradation. Frk also plays a role in regulation of embryonal pancreatic beta cell formation. Frk has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its activation loop. The tryosine involved is at the same site as the tyrosine involved in the autophosphorylation of Src. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 96

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 56.1 bits (135), Expect = 1e-08
 Identities = 21/54 (38%), Positives = 34/54 (62%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + + Y  FSS SDVW++G++MWEV + G+ PY  +   +V+  V+ G  L  P+
Sbjct: 178 EAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPR 231

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|212775 cd11841, SH3_SH3YL1_like, Src homology 3 domain of SH3 domain containing Ysc84-like 1 (SH3YL1) protein

 Score = 50.9 bits (122), Expect = 1e-08
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYVK 179
            V ALY F+  +  DLS + G    V+   D+Q  WW+ +   G VG  P+NYV 
Sbjct: 1   EVTALYSFEGQQPCDLSFQAGDRITVLTRTDSQFDWWEGR-LRGRVGIFPANYVS 54

SH3YL1 localizes to the plasma membrane and is required for dorsal ruffle formation. It binds phosphoinositides (PIs) with high affinity through its N-terminal SYLF domain (also called DUF500). In addition, SH3YL1 contains a C-terminal SH3 domain which has been reported to bind to N-WASP, dynamin 2, and SHIP2 (a PI 5-phosphatase). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212919 cd11986, SH3_Stac3_1, First C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing protein 3 (Stac3)

 Score = 51.1 bits (122), Expect = 1e-08
 Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 5/52 (9%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNGSVGYIPSNYV 178
           VALY FKA+E  DL    G    V+DD+ E WW  K+ +K    GY P N++
Sbjct: 3   VALYRFKALEKDDLDFHPGERITVIDDSNEEWWRGKIGEK---TGYFPMNFI 51

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac1 and Stac3 contain two SH3 domains while Stac2 contains a single SH3 domain at the C-terminus. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 55.7 bits (135), Expect = 1e-08
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIE------EAKVMTRLQHQNLVQ 486
           LL +LGSG FG V + K +G+  +  +K      +   +      E +++ RL H N+V+
Sbjct: 3   LLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVR 62

Query: 487 LYGVCSKHRPIYIVTD 502
           L         +Y+V +
Sbjct: 63  LIDAFEDKDHLYLVME 78

Length = 260

>gnl|CDD|198193 cd09940, SH2_Vav_family, Src homology 2 (SH2) domain found in the Vav family

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           W+VG+M R  AE+ L+    +G ++VR     +  Y LS+        VKH  I+Q S G
Sbjct: 7   WFVGEMERDTAENRLENR-PDGTYLVRVRPQGETQYALSIKYNG---DVKHMKIEQRSDG 62

Query: 316 EFFLSEKHCCHSIPE 330
            ++LSE     S+ E
Sbjct: 63  LYYLSESRHFKSLVE 77

Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, Vav2 and Vav3 are more ubiquitously expressed. The members here include insect and amphibian Vavs. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 102

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 55.8 bits (134), Expect = 1e-08
 Identities = 22/54 (40%), Positives = 37/54 (68%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + LNY+ +++ SDVW+YGVL+WE+ + G  PY  +   E+ +++ +G  LEKP 
Sbjct: 181 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPL 234

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|212774 cd11840, SH3_Intersectin_5, Fifth Src homology 3 domain (or SH3E) of Intersectin

 Score = 50.5 bits (121), Expect = 1e-08
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V+AL+P+ A    +LS +KG    V+      WW+  + NG  G  PSNYV+ 
Sbjct: 2   VIALFPYTAQNEDELSFQKGDIINVLSKDDPDWWR-GELNGQTGLFPSNYVEP 53

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The fifth SH3 domain (or SH3E) of ITSN1 has been shown to bind many protein partners including SGIP1, Sos1, dynamin1/2, CIN85, c-Cbl, SHIP2, N-WASP, and synaptojanin-1, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 55.8 bits (134), Expect = 1e-08
 Identities = 20/46 (43%), Positives = 36/46 (78%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +++KSDVW++GV MWE+ T G+ PY  ++N+E+ D +++G  L++P
Sbjct: 191 YTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQP 236

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 55.2 bits (133), Expect = 2e-08
 Identities = 21/53 (39%), Positives = 37/53 (69%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + +NY  F+ KSDVW++G+L+ E+ T G++PY  + N EV+  ++RG  + +P
Sbjct: 173 EAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRP 225

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 55.5 bits (134), Expect = 2e-08
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 10/80 (12%)

Query: 431 LMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTM--SEDDFIEEAKVMTRLQ 480
           ++L  ELG G FG V  G+              V  +KE     +  DF  EA+++T  Q
Sbjct: 7   IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQ 66

Query: 481 HQNLVQLYGVCSKHRPIYIV 500
           H+N+V+ YGVC++  P  +V
Sbjct: 67  HENIVKFYGVCTEGDPPIMV 86

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 55.2 bits (133), Expect = 2e-08
 Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 4/70 (5%)

Query: 435 EELGSGQFGVVRRGKWRGSIDVAMMK-EGTMSEDD---FIEEAKVMTRLQHQNLVQLYGV 490
           E++G G FG V +G  +G+ +VA+     T+  D    F++EA+++ +  H N+V+L GV
Sbjct: 1   EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGV 60

Query: 491 CSKHRPIYIV 500
           C + +PIYIV
Sbjct: 61  CVQKQPIYIV 70

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 55.3 bits (133), Expect = 2e-08
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQN 483
           W ++  +L L E +G G+FG V +G++ G        +  ++   F+EE  VMT+L H+N
Sbjct: 1   WLLNLQKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKN 60

Query: 484 LVQLYGVCSKHRPIYIVTDTSS 505
           LV+L GV   H  +YIV +  S
Sbjct: 61  LVRLLGVIL-HNGLYIVMELMS 81

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|212937 cd12004, SH3_Lyn, Src homology 3 domain of Lyn Protein Tyrosine Kinase

 Score = 50.4 bits (120), Expect = 2e-08
 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKE 180
           +VVALYP+  I   DLS +KG + +V+++  E WWK +       G+IPSNYV +
Sbjct: 1   IVVALYPYDGIHEDDLSFKKGEKLKVIEEHGE-WWKARSLTTKKEGFIPSNYVAK 54

Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 55.2 bits (133), Expect = 2e-08
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++SKSDVWA+GV MWE+ T G+ PY  ++N E+ D ++ G  L++P
Sbjct: 192 YTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQP 237

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|212836 cd11903, SH3_Nck2_3, Third Src Homology 3 domain of Nck2 adaptor protein

 Score = 50.4 bits (120), Expect = 2e-08
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYV 178
           VV  LYPF ++   +L+ EKG   EV++  +    WWK K+  G VG +P NYV
Sbjct: 2   VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNSRGQVGLVPKNYV 55

Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds neuronal signaling proteins such as ephrinB and Disabled-1 (Dab-1) exclusively. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The third SH3 domain of Nck appears to prefer ligands with a PxAPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|199828 cd09941, SH2_Grb2_like, Src homology 2 domain found in Growth factor receptor-bound protein 2 (Grb2) and similar proteins

 Score = 51.5 bits (124), Expect = 2e-08
 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 6/69 (8%)

Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHP-HVKHYHIK 310
           KP  W+ G +SR  AE IL  +  +G F++R S S+ G ++LS    V     V+H+ + 
Sbjct: 1   KPHPWFHGKISRAEAEEILMNQRPDGAFLIRESESSPGDFSLS----VKFGNDVQHFKVL 56

Query: 311 QNSRGEFFL 319
           ++  G++FL
Sbjct: 57  RDGAGKYFL 65

The adaptor proteins here include homologs Grb2 in humans, Sex muscle abnormal protein 5 (Sem-5) in Caenorhabditis elegans, and Downstream of receptor kinase (drk) in Drosophila melanogaster. They are composed of one SH2 and two SH3 domains. Grb2/Sem-5/drk regulates the Ras pathway by linking the tyrosine kinases to the Ras guanine nucleotide releasing protein Sos, which converts Ras to the active GTP-bound state. The SH2 domain of Grb2/Sem-5/drk binds class II phosphotyrosyl peptides while its SH3 domain binds to Sos and Sos-derived, proline-rich peptides. Besides it function in Ras signaling, Grb2 is also thought to play a role in apoptosis. Unlike most SH2 structures in which the peptide binds in an extended conformation (such that the +3 peptide residue occupies a hydrophobic pocket in the protein, conferring a modest degree of selectivity), Grb2 forms several hydrogen bonds via main chain atoms with the side chain of +2 Asn. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 95

>gnl|CDD|212767 cd11833, SH3_Stac_1, First C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing (Stac) proteins

 Score = 49.8 bits (119), Expect = 2e-08
 Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
           VALY FK  E  DL +  G +  ++DD+ E WWK K     VG+ P+N+V
Sbjct: 3   VALYKFKPQENEDLEMRPGDKITLLDDSNEDWWKGK-IEDRVGFFPANFV 51

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac1 and Stac3 contain two SH3 domains while Stac2 contains a single SH3 domain at the C-terminus. This model represents the first C-terminal SH3 domain of Stac1 and Stac3, and the single C-terminal SH3 domain of Stac2. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212771 cd11837, SH3_Intersectin_2, Second Src homology 3 domain (or SH3B) of Intersectin

 Score = 50.1 bits (120), Expect = 2e-08
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
              ALYP++A +   LS  KG    V++  QE WW  + + G  G+ P +YVKE
Sbjct: 1   TATALYPWRAKKENHLSFAKGDIITVLEQ-QEMWWFGELEGGEEGWFPKSYVKE 53

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The second SH3 domain (or SH3B) of ITSN1 has been shown to bind WNK and CdGAP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 54.7 bits (132), Expect = 3e-08
 Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 2/47 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM+YLE    +HR+
Sbjct: 90  MPLGCLLDYVRNHKDNIGSQ--YLLNWCVQIAKGMSYLEEKRLVHRD 134

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 54.7 bits (132), Expect = 3e-08
 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 21/93 (22%)

Query: 431 LMLLEELGSGQFGVV----------------RRGKWRGSID---VAMMKEGTMSE--DDF 469
           L  +E+LG GQFG V                       +     V +++        +DF
Sbjct: 7   LNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDF 66

Query: 470 IEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           ++E K+++RL   N+ +L GVC+   P+ ++ +
Sbjct: 67  LKEVKILSRLSDPNIARLLGVCTVDPPLCMIME 99

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 54.9 bits (132), Expect = 3e-08
 Identities = 20/53 (37%), Positives = 36/53 (67%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG++MWEV + G+ PY  + N +V++ +++   L  P
Sbjct: 181 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPP 233

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|212939 cd12006, SH3_Fyn_Yrk, Src homology 3 domain of Fyn and Yrk Protein Tyrosine Kinases

 Score = 50.0 bits (119), Expect = 3e-08
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY ++A    DLS  KG ++++++ ++  WW+ +    G  GYIPSNYV
Sbjct: 4   VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 54

Fyn and Yrk (Yes-related kinase) are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 55.2 bits (133), Expect = 3e-08
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 423 KWEIDPAELMLLEELGSGQFGVVRR------GKWRGSIDVA--MMKEGTMSEDD--FIEE 472
           KWE     L   + LG+G FG V         K    + VA  M+K    S +    + E
Sbjct: 29  KWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSE 88

Query: 473 AKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
            K+M+ L  H+N+V L G C+   PI ++T+
Sbjct: 89  LKIMSHLGNHENIVNLLGACTIGGPILVITE 119

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|212942 cd12009, SH3_Blk, Src homology 3 domain of Blk Protein Tyrosine Kinase

 Score = 49.8 bits (119), Expect = 3e-08
 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
            V+A Y F      DL L+KG + +V+    E WW  K    G  GYIPSNYV
Sbjct: 1   CVIAQYDFVPSNERDLQLKKGEKLQVLKSDGE-WWLAKSLTTGKEGYIPSNYV 52

Blk is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. It is expressed specifically in B-cells and is involved in pre-BCR (B-cell receptor) signaling. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212704 cd11770, SH3_Nephrocystin, Src Homology 3 domain of Nephrocystin (or Nephrocystin-1)

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 17/53 (32%), Positives = 28/53 (52%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             AL  F+A + GDLS +KG    ++    + WW  ++  G+ G +P  Y+K 
Sbjct: 2   YEALSDFQAEQEGDLSFKKGEVLRIISKRADGWWLAENSKGNRGLVPKTYLKV 54

Nephrocystin contains an SH3 domain involved in signaling pathways that regulate cell adhesion and cytoskeletal organization. It is a protein that in humans is associated with juvenile nephronophthisis, an inherited kidney disease characterized by renal fibrosis that lead to chronic renal failure in children. It is localized in cell-cell junctions in renal duct cells, and is known to interact with Ack1, an activated Cdc42-associated kinase. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 54.2 bits (130), Expect = 4e-08
 Identities = 22/50 (44%), Positives = 37/50 (74%)

Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           Y RF+ KSDVW++G+L+ E+ T G++PY  + N EV+++V+RG  +  P+
Sbjct: 177 YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQ 226

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 54.3 bits (130), Expect = 4e-08
 Identities = 23/49 (46%), Positives = 36/49 (73%)

Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           Y RF+ KSDVW++G+L+ E+ T G++PY  + N EV+D+V+RG  +  P
Sbjct: 177 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 225

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 54.4 bits (131), Expect = 4e-08
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 10/82 (12%)

Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTM--SEDDFIEEAK 474
           EI  + +  LEELG G FG V +G+  G        S+ +  +KE      + +F +EA+
Sbjct: 1   EIPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAE 60

Query: 475 VMTRLQHQNLVQLYGVCSKHRP 496
           +M+ LQH N+V L GVC+K +P
Sbjct: 61  LMSDLQHPNIVCLLGVCTKEQP 82

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|198210 cd10347, SH2_Nterm_shark_like, N-terminal Src homology 2 (SH2) domain found in SH2 domains, ANK, and kinase domain (shark) proteins

 Score = 49.7 bits (119), Expect = 6e-08
 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 5/69 (7%)

Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           WY G +SR+ AE++L ++  ++G F+VR S S  G Y LSL  +     V HY I+++  
Sbjct: 3   WYHGKISREVAEALLLREGGRDGLFLVRESTSAPGDYVLSLLAQ---GEVLHYQIRRHGE 59

Query: 315 GEFFLSEKH 323
             FF  +  
Sbjct: 60  DAFFSDDGP 68

These non-receptor protein-tyrosine kinases contain two SH2 domains, five ankyrin (ANK)-like repeats, and a potential tyrosine phosphorylation site in the carboxyl-terminal tail which resembles the phosphorylation site in members of the src family. Like, mammalian non-receptor protein-tyrosine kinases, ZAP-70 and syk proteins, they do not have SH3 domains. However, the presence of ANK makes these unique among protein-tyrosine kinases. Both tyrosine kinases and ANK repeats have been shown to transduce developmental signals, and SH2 domains are known to participate intimately in tyrosine kinase signaling. These tyrosine kinases are believed to be involved in epithelial cell polarity. The members of this family include the shark (SH2 domains, ANK, and kinase domain) gene in Drosophila and yellow fever mosquitos, as well as the hydra protein HTK16. Drosophila Shark is proposed to transduce intracellularly the Crumbs, a protein necessary for proper organization of ectodermal epithelia, intercellular signal. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 81

>gnl|CDD|212882 cd11949, SH3_GRB2_C, C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2

 Score = 48.7 bits (116), Expect = 6e-08
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           V AL+ F   E G+L   +G   EVMD++  +WWK    +G  G  P NYV 
Sbjct: 2   VQALFDFDPQEDGELGFRRGDFIEVMDNSDPNWWKGA-CHGQTGMFPRNYVT 52

GRB2 is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. It is ubiquitously expressed in all tissues throughout development and is important in cell cycle progression, motility, morphogenesis, and angiogenesis. In lymphocytes, GRB2 is associated with antigen receptor signaling components. GRB2 contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domain of GRB2 binds to Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, as well as to the proline-rich C-terminus of FGRF2. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212779 cd11845, SH3_Src_like, Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases

 Score = 48.7 bits (117), Expect = 7e-08
 Identities = 14/38 (36%), Positives = 23/38 (60%)

Query: 74  VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
           + VALY ++A    DLS +KG   +++DD+   WW  +
Sbjct: 1   IYVALYDYEARTDDDLSFKKGDRLQILDDSDGDWWLAR 38

Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, Yes, and Brk. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). However, Brk lacks the N-terminal myristoylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells, and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, Lyn, and Brk show a limited expression pattern. This subfamily also includes Drosophila Src42A, Src oncogene at 42A (also known as Dsrc41) which accumulates at sites of cell-cell or cell-matrix adhesion, and participates in Drosphila development and wound healing. It has been shown to promote tube elongation in the tracheal system, is essential for proper cell-cell matching during dorsal closure, and regulates cell-cell contacts in developing Drosophila eyes. The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212703 cd11769, SH3_CSK, Src Homology 3 domain of C-terminal Src kinase

 Score = 48.8 bits (117), Expect = 7e-08
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQE-HWWKVKDKNGSVGYIPSNYVKE 180
            +A Y F      DL  +KG    ++  T++ +W+K K+K+G  G IP+NYV++
Sbjct: 4   CIAKYNFNGASEEDLPFKKGDILTIVAVTKDPNWYKAKNKDGREGMIPANYVQK 57

CSK is a cytoplasmic (or nonreceptor) tyr kinase containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, CSK is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. CSK catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. It is expressed in a wide variety of tissues and plays a role, as a regulator of Src, in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, CSK also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212841 cd11908, SH3_ITK, Src Homology 3 domain of Interleukin-2-inducible T-cell Kinase

 Score = 48.5 bits (115), Expect = 9e-08
 Identities = 17/42 (40%), Positives = 30/42 (71%)

Query: 74  VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           +V+ALY ++  +  +L+L    EY ++D ++ HWW+V+DKNG
Sbjct: 2   LVIALYDYQTNDPQELALRYNEEYHLLDSSEIHWWRVQDKNG 43

ITK (also known as Tsk or Emt) is a cytoplasmic (or nonreceptor) tyr kinase containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. It also contains an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation, and the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. ITK is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, ITK plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, ITK is crucial for the development of T-helper(Th)2 effector responses. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 53.2 bits (128), Expect = 9e-08
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 10/86 (11%)

Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMS----EDDFIEEAK 474
           E+    + LL  LG G FG V  G +RG       + VA+           E DF+ EA 
Sbjct: 2   EVPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEAL 61

Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIV 500
           +M++  HQN+V+L GV  +  P +I+
Sbjct: 62  IMSKFNHQNIVRLIGVSFERLPRFIL 87

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 53.3 bits (128), Expect = 9e-08
 Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 8/85 (9%)

Query: 426 IDPAELMLLEELGSGQFGVVRRGKW----RGSIDVAM--MKEGTMSED--DFIEEAKVMT 477
           ID + + + E +G+G+FG V RG+     +  I VA+  +K G   +   DF+ EA +M 
Sbjct: 1   IDVSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMG 60

Query: 478 RLQHQNLVQLYGVCSKHRPIYIVTD 502
           +  H N++ L GV +K RP+ I+T+
Sbjct: 61  QFDHPNIIHLEGVVTKSRPVMIITE 85

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 53.5 bits (128), Expect = 9e-08
 Identities = 20/54 (37%), Positives = 36/54 (66%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + + Y +FSS SD+W++GV++WE+F+ G  PY    N EV++ V++  +L   +
Sbjct: 196 EAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSE 249

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 52.6 bits (126), Expect = 1e-07
 Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 2/47 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M +G LLNYLR H          LL+MC  VC+GMAYLE   +IHR+
Sbjct: 81  MSNGCLLNYLREHGKRF--QPSQLLEMCKDVCEGMAYLESKQFIHRD 125

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 52.8 bits (126), Expect = 1e-07
 Identities = 22/51 (43%), Positives = 37/51 (72%)

Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
           Y RF+ KSDVW++G+L+ E+ T G++PY  + N EV+++V+RG  +  P+ 
Sbjct: 177 YGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQG 227

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|212919 cd11986, SH3_Stac3_1, First C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing protein 3 (Stac3)

 Score = 48.0 bits (114), Expect = 1e-07
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 76  VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNGIRKPDQMIR 124
           VALY FKA+E  DL    G    V+DD+ E WW  K+ +K G    + +IR
Sbjct: 3   VALYRFKALEKDDLDFHPGERITVIDDSNEEWWRGKIGEKTGYFPMNFIIR 53

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac1 and Stac3 contain two SH3 domains while Stac2 contains a single SH3 domain at the C-terminus. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212692 cd11758, SH3_CRK_N, N-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins

 Score = 48.1 bits (115), Expect = 1e-07
 Identities = 18/53 (33%), Positives = 27/53 (50%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V AL+ F   +  DL  +KG    V+   +E WW  ++  G  G IP  YV++
Sbjct: 3   VRALFDFPGNDDEDLPFKKGEILTVIRKPEEQWWNARNSEGKTGMIPVPYVEK 55

CRK adaptor proteins consists of SH2 and SH3 domains, which bind tyrosine-phosphorylated peptides and proline-rich motifs, respectively. They function downstream of protein tyrosine kinases in many signaling pathways started by various extracellular signals, including growth and differentiation factors. Cellular CRK (c-CRK) contains a single SH2 domain, followed by N-terminal and C-terminal SH3 domains. It is involved in the regulation of many cellular processes including cell growth, motility, adhesion, and apoptosis. CRK has been implicated in the malignancy of various human cancers. The N-terminal SH3 domain of CRK binds a number of target proteins including DOCK180, C3G, SOS, and cABL. The CRK family includes two alternatively spliced protein forms, CRKI and CRKII, that are expressed by the CRK gene, and the CRK-like (CRKL) protein, which is expressed by a distinct gene (CRKL). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212844 cd11911, SH3_CIP4-like, Src Homology 3 domain of Cdc42-Interacting Protein 4

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVM-DDTQEHWWKVKDKNGSVGYIPSNYVK 179
              ALY F     G LS+E+G    V+ +D  + W +V+  NG  GY+P++Y++
Sbjct: 1   TCTALYDFDGTSEGTLSMEEGEILLVLEEDGGDGWTRVRKNNGDEGYVPTSYIE 54

This subfamily is composed of Cdc42-Interacting Protein 4 (CIP4), Formin Binding Protein 17 (FBP17), FormiN Binding Protein 1-Like (FNBP1L), and similar proteins. CIP4 and FNBP1L are Cdc42 effectors that bind Wiskott-Aldrich syndrome protein (WASP) and function in endocytosis. CIP4 and FBP17 bind to the Fas ligand and may be implicated in the inflammatory response. CIP4 may also play a role in phagocytosis. It functions downstream of Cdc42 in PDGF-dependent actin reorganization and cell migration, and also regulates the activity of PDGFRbeta. It uses Src as a substrate in regulating the invasiveness of breast tumor cells. CIP4 may also play a role in the pathogenesis of Huntington's disease. Members of this subfamily typically contain an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain, a central Cdc42-binding HR1 domain, and a C-terminal SH3 domain. The SH3 domain of CIP4 associates with Gapex-5, a Rab31 GEF. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212918 cd11985, SH3_Stac2_C, C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing protein 2 (Stac2)

 Score = 48.0 bits (114), Expect = 1e-07
 Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           VALY F   E  DL L+ G    V+DD+ E WWK K  +  VG+ P+N+V+
Sbjct: 3   VALYKFLPQENNDLPLQPGDRVMVVDDSNEDWWKGKSGD-RVGFFPANFVQ 52

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac2 contains a single SH3 domain at the C-terminus unlike Stac1 and Stac3, which contain two C-terminal SH3 domains. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212695 cd11761, SH3_FCHSD_1, First Src Homology 3 domain of FCH and double SH3 domains proteins

 Score = 48.1 bits (115), Expect = 1e-07
 Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVM-DDTQEHWWKVKDKNGSVGYIPSNYV 178
             LY ++A    +L++ +G E EV+ D   + W K ++K+G VGY+P NY+
Sbjct: 5   KVLYSYEAQRPDELTITEGEELEVIEDGDGDGWVKARNKSGEVGYVPENYL 55

This group is composed of FCH and double SH3 domains protein 1 (FCHSD1) and FCHSD2. These proteins have a common domain structure consisting of an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs), two SH3, and C-terminal proline-rich domains. They have only been characterized in silico and their functions remain unknown. This group also includes the insect protein, nervous wreck, which acts as a regulator of synaptic growth signaling. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212739 cd11805, SH3_GRB2_like_C, C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2 (GRB2) and related proteins

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V ALY F   E G+L   +G    V+D +   WWK  +  G VG  P+NYV+ 
Sbjct: 2   VQALYDFNPQEPGELEFRRGDIITVLDSSDPDWWK-GELRGRVGIFPANYVQP 53

This family includes the adaptor protein GRB2 and related proteins including Drosophila melanogaster Downstream of receptor kinase (DRK), Caenorhabditis elegans Sex muscle abnormal protein 5 (Sem-5), GRB2-related adaptor protein (GRAP), GRAP2, and similar proteins. Family members contain an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. GRB2/Sem-5/DRK is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. GRAP2 plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. GRAP acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. The C-terminal SH3 domains (SH3c) of GRB2 and GRAP2 have been shown to bind to classical PxxP motif ligands, as well as to non-classical motifs. GRB2 SH3c binds Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, while the SH3c of GRAP2 binds to the phosphatase-like protein HD-PTP via a RxxxxK motif. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 2/47 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M HG L +YLR            LL MC+ VC+GMAYLE  N IHR+
Sbjct: 81  MEHGCLSDYLRAQRGKFSQET--LLGMCLDVCEGMAYLESSNVIHRD 125

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 10/75 (13%)

Query: 435 EELGSGQFGVVRRGKWRGSIDVAMMKEGTMSED-------DFIEEAKVMTRLQHQNLVQL 487
           E LG G FG V +G  +    VA+    T  ED        F+ EA+++ +  H N+V+L
Sbjct: 1   ELLGKGNFGEVFKGTLKDKTPVAVK---TCKEDLPQELKIKFLSEARILKQYDHPNIVKL 57

Query: 488 YGVCSKHRPIYIVTD 502
            GVC++ +PIYIV +
Sbjct: 58  IGVCTQRQPIYIVME 72

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 52.3 bits (125), Expect = 2e-07
 Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 8/86 (9%)

Query: 425 EIDPAELMLLEELGSGQFGVVRRG------KWRGSIDVAMMKEGTMSE--DDFIEEAKVM 476
           EI P+ +   + +G+G+FG V RG      +   ++ +  +K G   +   DF+ EA +M
Sbjct: 1   EIHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIM 60

Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N+++L GV +K +P  I+T+
Sbjct: 61  GQFSHHNIIRLEGVVTKFKPAMIITE 86

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 52.4 bits (126), Expect = 2e-07
 Identities = 19/46 (41%), Positives = 31/46 (67%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+FT G  PY  +   E+   ++ G  +EKP
Sbjct: 211 YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKP 256

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|212837 cd11904, SH3_Nck1_3, Third Src Homology 3 domain of Nck1 adaptor protein

 Score = 47.7 bits (113), Expect = 2e-07
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYV 178
           VV ALYPF +    +L+ EKG   +V++  +    WWK +  NG VG +P NYV
Sbjct: 2   VVQALYPFSSSNDEELNFEKGEVMDVIEKPENDPEWWKCRKANGQVGLVPKNYV 55

Nck1 (also called Nckalpha) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds and activates RasGAP, resulting in the downregulation of Ras. It is also involved in the signaling of endothilin-mediated inhibition of cell migration. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The third SH3 domain of Nck appears to prefer ligands with a PxAPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|198206 cd10343, SH2_SHIP, Src homology 2 (SH2) domain found in SH2-containing inositol-5'-phosphatase (SHIP) and SLAM-associated protein (SAP)

 Score = 49.0 bits (117), Expect = 2e-07
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 6/66 (9%)

Query: 254 PKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLS-LYTKVPHPHVKHYHIKQ 311
              WY G+++R +AE +L +  K+G F+VR+S S  G Y L  LY       V  Y I  
Sbjct: 2   APPWYHGNITRSKAEELLSKAGKDGSFLVRDSESVSGAYALCVLYQN----CVHTYRILP 57

Query: 312 NSRGEF 317
           N+  + 
Sbjct: 58  NAEDKL 63

The SH2-containing inositol-5'-phosphatase, SHIP (also called SHIP1/SHIP1a), is a hematopoietic-restricted phosphatidylinositide phosphatase that translocates to the plasma membrane after extracellular stimulation and hydrolyzes the phosphatidylinositol-3-kinase (PI3K)-generated second messenger PI-3,4,5-P3 (PIP3) to PI-3,4-P2. As a result, SHIP dampens down PIP3 mediated signaling and represses the proliferation, differentiation, survival, activation, and migration of hematopoietic cells. PIP3 recruits lipid-binding pleckstrin homology(PH) domain-containing proteins to the inner wall of the plasma membrane and activates them. PH domain-containing downstream effectors include the survival/proliferation enhancing serine/threonine kinase, Akt (protein kinase B), the tyrosine kinase, Btk, the regulator of protein translation, S6K, and the Rac and cdc42 guanine nucleotide exchange factor, Vav. SHIP is believed to act as a tumor suppressor during leukemogenesis and lymphomagenesis, and may play a role in activating the immune system to combat cancer. SHIP contains an N-terminal SH2 domain, a centrally located phosphatase domain that specifically hydrolyzes the 5'-phosphate from PIP3, PI-4,5-P2 and inositol-1,3,4,5- tetrakisphosphate (IP4), a C2 domain, that is an allosteric activating site when bound by SHIP's enzymatic product, PI-3,4-P2; 2 NPXY motifs that bind proteins with a phosphotyrosine binding (Shc, Dok 1, Dok 2) or an SH2 (p85a, SHIP2) domain; and a proline-rich domain consisting of four PxxP motifs that bind a subset of SH3-containing proteins including Grb2, Src, Lyn, Hck, Abl, PLCg1, and PIAS1. The SH2 domain of SHIP binds to the tyrosine phosphorylated forms of Shc, SHP-2, Doks, Gabs, CD150, platelet-endothelial cell adhesion molecule, Cas, c-Cbl, immunoreceptor tyrosine-based inhibitory motifs (ITIMs), and immunoreceptor tyrosine-based activation motifs (ITAMs). The X-linked lymphoproliferative syndrome (XLP) gene encodes SAP (also called SH2D1A/DSHP) a protein that consists of a 5 residue N-terminus, a single SH2 domain, and a short 25 residue C-terminal tail. XLP is characterized by an extreme sensitivity to Epstein-Barr virus. Both T and natural killer (NK) cell dysfunctions have been seen in XLP patients. SAP binds the cytoplasmic tail of Signaling lymphocytic activation molecule (SLAM), 2B4, Ly-9, and CD84. SAP is believed to function as a signaling inhibitor, by blocking or regulating binding of other signaling proteins. SAP and the SAP-like protein EAT-2 recognize the sequence motif TIpYXX(V/I), which is found in the cytoplasmic domains of a restricted number of T, B, and NK cell surface receptors and are proposed to be natural inhibitors or regulators of the physiological role of a small family of receptors on the surface of these cells. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 52.8 bits (126), Expect = 2e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)

Query: 195 LTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + LE IH    Y +F+ +SDVW+YGV +WE+ T G  PY  +   E+ D +++G  L +P
Sbjct: 178 MALECIH----YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQP 233

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|198230 cd10367, SH2_Src_Fgr, Src homology 2 (SH2) domain found in Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog, Fgr

 Score = 48.7 bits (116), Expect = 2e-07
 Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 255 KAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIK 310
           + WY G + R+ AE  +L   +  G F++R S +TKG Y+LS+  + +    HVKHY I+
Sbjct: 3   EEWYFGKIGRKDAERQLLSPGNPRGAFLIRESETTKGAYSLSIRDWDQNRGDHVKHYKIR 62

Query: 311 QNSRGEFFLSEK 322
           +   G ++++ +
Sbjct: 63  KLDTGGYYITTR 74

Fgr is a member of the Src non-receptor type tyrosine kinase family of proteins. The protein contains N-terminal sites for myristoylation and palmitoylation, a PTK domain, and SH2 and SH3 domains which are involved in mediating protein-protein interactions with phosphotyrosine-containing and proline-rich motifs, respectively. Fgr is expressed in B-cells and myeloid cells, localizes to plasma membrane ruffles, and functions as a negative regulator of cell migration and adhesion triggered by the beta-2 integrin signal transduction pathway. Multiple alternatively spliced variants, encoding the same protein, have been identified Fgr has been shown to interact with Wiskott-Aldrich syndrome protein. Fgr has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|212776 cd11842, SH3_Ysc84p_like, Src homology 3 domain of Ysc84p and similar fungal proteins

 Score = 47.4 bits (113), Expect = 2e-07
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYVKE 180
            VALY F   + GDL+ +KG    ++   D+Q  WW  +   G  G  P+NYV+ 
Sbjct: 2   AVALYDFAGEQPGDLAFQKGDIITILKKSDSQNDWWTGR-IGGREGIFPANYVEL 55

This family is composed of the Saccharomyces cerevisiae proteins, Ysc84p (also called LAS17-binding protein 4, Lsb4p) and Lsb3p, and similar fungal proteins. They contain an N-terminal SYLF domain (also called DUF500) and a C-terminal SH3 domain. Ysc84p localizes to actin patches and plays an important in actin polymerization during endocytosis. The N-terminal domain of both Ysc84p and Lsb3p can bind and bundle actin filaments. A study of the yeast SH3 domain interactome predicts that the SH3 domains of Lsb3p and Lsb4p may function as molecular hubs for the assembly of endocytic complexes. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|198228 cd10365, SH2_Src_Src, Src homology 2 (SH2) domain found in tyrosine kinase sarcoma (Src)

 Score = 48.5 bits (115), Expect = 2e-07
 Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)

Query: 331 VKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 387
            ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +   +S+ 
Sbjct: 22  AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 81

Query: 388 EVVNYHRHNSGGLASRLKT 406
           ++V Y+  ++ GL  RL T
Sbjct: 82  QLVAYYSKHADGLCHRLTT 100

Src is a member of the Src non-receptor type tyrosine kinase family of proteins. Src is thought to play a role in the regulation of embryonic development and cell growth. Members here include v-Src and c-Src. v-Src lacks the C-terminal inhibitory phosphorylation site and is therefore constitutively active as opposed to normal cellular src (c-Src) which is only activated under certain circumstances where it is required (e.g. growth factor signaling). v-Src is an oncogene whereas c-Src is a proto-oncogene. c-Src consists of three domains, an N-terminal SH3 domain, a central SH2 domain and a tyrosine kinase domain. The SH2 and SH3 domains work together in the auto-inhibition of the kinase domain. The phosphorylation of an inhibitory tyrosine near the c-terminus of the protein produces a binding site for the SH2 domain which then facilitates binding of the SH3 domain to a polyproline site within the linker between the SH2 domain and the kinase domain. Binding of the SH3 domain inactivates the enzyme. This allows for multiple mechanisms for c-Src activation: dephosphorylation of the C-terminal tyrosine by a protein tyrosine phosphatase, binding of the SH2 domain by a competitive phospho-tyrosine residue, or competitive binding of a polyproline binding site to the SH3 domain. Unlike most other Src members Src lacks cysteine residues in the SH4 domain that undergo palmitylation. Serine and threonine phosphorylation sites have also been identified in the unique domains of Src and are believed to modulate protein-protein interactions or regulate catalytic activity. Alternatively spliced forms of Src, which contain 6- or 11-amino acid insertions in the SH3 domain, are expressed in CNS neurons. c-Src has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 51.8 bits (124), Expect = 3e-07
 Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 1/49 (2%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETK 49
           M +GSL+++L+  E  +   +  L+DM  Q+ +GMA++ER NYIHR+ +
Sbjct: 82  MENGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIERKNYIHRDLR 129

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|212839 cd11906, SH3_BTK, Src Homology 3 domain of Bruton's tyrosine kinase

 Score = 47.1 bits (112), Expect = 3e-07
 Identities = 19/43 (44%), Positives = 28/43 (65%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           K VVALY +  +   DL L KG EY +++++   WW+ +DKNG
Sbjct: 1   KKVVALYDYTPMNAQDLQLRKGEEYVILEESNLPWWRARDKNG 43

BTK is a cytoplasmic (or nonreceptor) tyr kinase containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. It also contains an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation, and the Tec homology (TH) domain with proline-rich and zinc-binding regions. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 51.2 bits (122), Expect = 3e-07
 Identities = 19/52 (36%), Positives = 36/52 (69%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEK 253
           + +N+  F+ KSDVW++G+L+ E+ T G++PY  + N EV+  ++RG  + +
Sbjct: 173 EAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR 224

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|198228 cd10365, SH2_Src_Src, Src homology 2 (SH2) domain found in tyrosine kinase sarcoma (Src)

 Score = 48.5 bits (115), Expect = 3e-07
 Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)

Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
           WY G ++R+ +E +L   E+  G F+VR S +TKG Y LS+  +      +VKHY I++ 
Sbjct: 5   WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 64

Query: 313 SRGEFFLSEK 322
             G F+++ +
Sbjct: 65  DSGGFYITSR 74

Src is a member of the Src non-receptor type tyrosine kinase family of proteins. Src is thought to play a role in the regulation of embryonic development and cell growth. Members here include v-Src and c-Src. v-Src lacks the C-terminal inhibitory phosphorylation site and is therefore constitutively active as opposed to normal cellular src (c-Src) which is only activated under certain circumstances where it is required (e.g. growth factor signaling). v-Src is an oncogene whereas c-Src is a proto-oncogene. c-Src consists of three domains, an N-terminal SH3 domain, a central SH2 domain and a tyrosine kinase domain. The SH2 and SH3 domains work together in the auto-inhibition of the kinase domain. The phosphorylation of an inhibitory tyrosine near the c-terminus of the protein produces a binding site for the SH2 domain which then facilitates binding of the SH3 domain to a polyproline site within the linker between the SH2 domain and the kinase domain. Binding of the SH3 domain inactivates the enzyme. This allows for multiple mechanisms for c-Src activation: dephosphorylation of the C-terminal tyrosine by a protein tyrosine phosphatase, binding of the SH2 domain by a competitive phospho-tyrosine residue, or competitive binding of a polyproline binding site to the SH3 domain. Unlike most other Src members Src lacks cysteine residues in the SH4 domain that undergo palmitylation. Serine and threonine phosphorylation sites have also been identified in the unique domains of Src and are believed to modulate protein-protein interactions or regulate catalytic activity. Alternatively spliced forms of Src, which contain 6- or 11-amino acid insertions in the SH3 domain, are expressed in CNS neurons. c-Src has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 52.2 bits (125), Expect = 3e-07
 Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 1/48 (2%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKPK 255
           ++++SDVW++GVL+WE+F+ G  PY  ++ + E   R++ G  +  P+
Sbjct: 252 YTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPE 299

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 51.6 bits (124), Expect = 3e-07
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 12/104 (11%)

Query: 152 VMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLE-LIHQVLNYTRFS 210
           V+D+  +   K+ D   S    P +Y      LG  +   V  + LE L+++      +S
Sbjct: 149 VIDEELQ--VKITDNALSRDLFPMDY----HCLGDNENRPVKWMALESLVNKE-----YS 197

Query: 211 SKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           S SDVW++GVL+WE+ T G+ PY  +   E+   ++ G  L +P
Sbjct: 198 SASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQP 241

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|212896 cd11963, SH3_STAM2, Src homology 3 domain of Signal Transducing Adaptor Molecule 2

 Score = 46.9 bits (111), Expect = 3e-07
 Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
           V ALY F+A+E  +L+ + G    V+DD+  +WWK ++  G VG  PSN+V
Sbjct: 4   VRALYDFEAVEDNELTFKHGEIIIVLDDSDANWWKGENHRG-VGLFPSNFV 53

STAM2, also called EAST (Epidermal growth factor receptor-associated protein with SH3 and TAM domain) or Hbp (Hrs binding protein), is part of the endosomal sorting complex required for transport (ESCRT-0). It plays a role in sorting mono-ubiquinated endosomal cargo for trafficking to the lysosome for degradation. It is also involved in the regulation of exocytosis. STAMs were discovered as proteins that are highly phosphorylated following cytokine and growth factor stimulation. They function in cytokine signaling and surface receptor degradation, as well as regulate Golgi morphology. They associate with many proteins including Jak2 and Jak3 tyrosine kinases, Hrs, AMSH, and UBPY. STAM adaptor proteins contain VHS (Vps27, Hrs, STAM homology), ubiquitin interacting (UIM), and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 51.9 bits (124), Expect = 3e-07
 Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)

Query: 3   HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
            GSLL+++R+H ++L      LL+ C+Q+ KGM YLE H  +HR
Sbjct: 92  LGSLLDHVRQHRDSLDPQ--RLLNWCVQIAKGMYYLEEHRMVHR 133

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 51.5 bits (123), Expect = 3e-07
 Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 177 YVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRL 236
           Y  +K+    +    +  + LE I     + R++ +SDVW+YGV +WE+ + G  PY  +
Sbjct: 160 YPDDKKYFYSEHKTPIKWMALESIL----FGRYTHQSDVWSYGVTVWEMMSYGAEPYAGM 215

Query: 237 KNTEVVDRVQRGIILEKPK 255
           +  EV D +++G  L +P+
Sbjct: 216 RPHEVPDLLEKGERLAQPQ 234

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 52.3 bits (125), Expect = 3e-07
 Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 13/101 (12%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDD--FIEEA 473
           WE+    L+L   LGSG FG V      G         + V M+K    S +    + E 
Sbjct: 32  WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSEL 91

Query: 474 KVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
           K+M+ L  H N+V L G C+K  PIYI+T+    R G L D
Sbjct: 92  KIMSHLGPHLNIVNLLGACTKGGPIYIITEYC--RYGDLVD 130

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|198184 cd09930, SH2_cSH2_p85_like, C-terminal Src homology 2 (cSH2) domain found in p85

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 4/61 (6%)

Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           + W VGD++R +AE +L+ +  +G F++R SST+G Y  S+   V +  VKH  I +   
Sbjct: 6   RTWLVGDINRTQAEELLRGK-PDGTFLIRESSTQGCYACSV---VCNGEVKHCVIYKTET 61

Query: 315 G 315
           G
Sbjct: 62  G 62

Phosphoinositide 3-kinases (PI3Ks) are essential for cell growth, migration, and survival. p110, the catalytic subunit, is composed of an adaptor-binding domain, a Ras-binding domain, a C2 domain, a helical domain, and a kinase domain. The regulatory unit is called p85 and is composed of an SH3 domain, a RhoGap domain, a N-terminal SH2 (nSH2) domain, a inter SH2 (iSH2) domain, and C-terminal (cSH2) domain. There are 2 inhibitory interactions between p110alpha and p85 of P13K: 1) p85 nSH2 domain with the C2, helical, and kinase domains of p110alpha and 2) p85 iSH2 domain with C2 domain of p110alpha. There are 3 inhibitory interactions between p110beta and p85 of P13K: 1) p85 nSH2 domain with the C2, helical, and kinase domains of p110beta, 2) p85 iSH2 domain with C2 domain of p110alpha, and 3) p85 cSH2 domain with the kinase domain of p110alpha. It is interesting to note that p110beta is oncogenic as a wild type protein while p110alpha lacks this ability. One explanation is the idea that the regulation of p110beta by p85 is unique because of the addition of inhibitory contacts from the cSH2 domain and the loss of contacts in the iSH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 51.3 bits (123), Expect = 4e-07
 Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           +  GSLL +LR+ +N L   V  LL M +    GM YLE  N IHR+
Sbjct: 74  VPGGSLLTFLRKKKNRL--TVKKLLQMSLDAAAGMEYLESKNCIHRD 118

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 50.8 bits (121), Expect = 4e-07
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%)

Query: 435 EELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-----EDDFIEEAKVMTRLQHQNLVQLYG 489
           E +G G FG V  G+ R       +K    +     +  F++EA+++ +  H N+V+L G
Sbjct: 1   ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 60

Query: 490 VCSKHRPIYIVTD 502
           VC++ +PIYIV +
Sbjct: 61  VCTQKQPIYIVME 73

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 51.2 bits (123), Expect = 4e-07
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 16/90 (17%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSID------VAMMKEGTMSEDD-------FI 470
           WE+   ++ L+ ELG G FG+V  G  +G +       VA+    T++E+        F+
Sbjct: 1   WELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIK---TVNENASMRERIEFL 57

Query: 471 EEAKVMTRLQHQNLVQLYGVCSKHRPIYIV 500
            EA VM      ++V+L GV S  +P  +V
Sbjct: 58  NEASVMKEFNCHHVVRLLGVVSTGQPTLVV 87

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|212758 cd11824, SH3_PSTPIP1, Src homology 3 domain of Proline-Serine-Threonine Phosphatase-Interacting Protein 1

 Score = 46.6 bits (111), Expect = 4e-07
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
             LY + A E  +LS+ KG    V++  ++ WW V ++NG  G +P  Y++
Sbjct: 3   SVLYDYTAQEDDELSISKGDVVAVIEKGEDGWWTV-ERNGQKGLVPGTYLE 52

PSTPIP1, also called CD2 Binding Protein 1 (CD2BP1), is mainly expressed in hematopoietic cells. It is a binding partner of the cell surface receptor CD2 and PTP-PEST, a tyrosine phosphatase which functions in cell motility and Rac1 regulation. It also plays a role in the activation of the Wiskott-Aldrich syndrome protein (WASP), which couples actin rearrangement and T cell activation. Mutations in the gene encoding PSTPIP1 cause the autoinflammatory disorder known as PAPA (pyogenic sterile arthritis, pyoderma gangrenosum, and acne) syndrome. PSTPIP1 contains an N-terminal F-BAR domain, PEST motifs, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212938 cd12005, SH3_Lck, Src homology 3 domain of Lck Protein Tyrosine Kinase

 Score = 46.7 bits (111), Expect = 4e-07
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VVALY ++    GDL  EKG +  +++ + E WWK +    G  G+IP N+V
Sbjct: 2   VVALYSYEPSHDGDLGFEKGEKLRILEQSGE-WWKAQSLTTGQEGFIPFNFV 52

Lck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lck is expressed in T-cells and natural killer cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212941 cd12008, SH3_Src, Src homology 3 domain of Src Protein Tyrosine Kinase

 Score = 46.6 bits (110), Expect = 4e-07
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY +++    DLS +KG   +++++T+  WW       G  GYIPSNYV
Sbjct: 3   VALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLTTGQTGYIPSNYV 53

Src (or c-Src) is a cytoplasmic (or non-receptor) PTK and is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells, and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 50.8 bits (121), Expect = 5e-07
 Identities = 19/46 (41%), Positives = 32/46 (69%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           F++ SDVW++GV++WE+ T  + PY  + N +V+  V  G +L+KP
Sbjct: 198 FTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKP 243

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|212740 cd11806, SH3_PRMT2, Src homology 3 domain of Protein arginine N-methyltransferase 2

 Score = 46.2 bits (110), Expect = 5e-07
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
             VA+  F A +   LS E G +  V+      WW   + NG  GYIP++++
Sbjct: 1   EYVAIADFVATDDSQLSFESGDKLLVLRKPSVDWWWA-EHNGCCGYIPASHL 51

PRMT2, also called HRMT1L1, belongs to the arginine methyltransferase protein family. It functions as a coactivator to both estrogen receptor alpha (ER-alpha) and androgen receptor (AR), presumably through arginine methylation. The ER-alpha transcription factor is involved in cell proliferation, differentiation, morphogenesis, and apoptosis, and is also implicated in the development and progression of breast cancer. PRMT2 and its variants are upregulated in breast cancer cells and may be involved in modulating the ER-alpha signaling pathway during formation of breast cancer. PRMT2 also plays a role in regulating the function of E2F transcription factors, which are critical cell cycle regulators, by binding to the retinoblastoma gene product (RB). It contains an N-terminal SH3 domain and an AdoMet binding domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212897 cd11964, SH3_STAM1, Src homology 3 domain of Signal Transducing Adaptor Molecule 1

 Score = 46.5 bits (110), Expect = 5e-07
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
           + V A+Y F+A E  +L+ + G    ++DD+  +WWK +   G  G  PSN+V
Sbjct: 1   RKVRAIYDFEAAEDNELTFKAGDIITILDDSDPNWWKGETPQG-TGLFPSNFV 52

STAM1 is part of the endosomal sorting complex required for transport (ESCRT-0) and is involved in sorting ubiquitinated cargo proteins from the endosome. It may also be involved in the regulation of IL2 and GM-CSF mediated signaling, and has been implicated in neural cell survival. STAMs were discovered as proteins that are highly phosphorylated following cytokine and growth factor stimulation. They function in cytokine signaling and surface receptor degradation, as well as regulate Golgi morphology. They associate with many proteins including Jak2 and Jak3 tyrosine kinases, Hrs, AMSH, and UBPY. STAM adaptor proteins contain VHS (Vps27, Hrs, STAM homology), ubiquitin interacting (UIM), and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212706 cd11772, SH3_OSTF1, Src Homology 3 domain of metazoan osteoclast stimulating factor 1

 Score = 46.1 bits (110), Expect = 5e-07
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V  ALY ++A    +LS E+G    + D +  +WWK     G  G IPSNYV+E
Sbjct: 1   VFRALYDYEAQHPDELSFEEGDLLYISDKSDPNWWKATCG-GKTGLIPSNYVEE 53

OSTF1, also named OSF or SH3P2, is a signaling protein containing SH3 and ankyrin-repeat domains. It acts through a Src-related pathway to enhance the formation of osteoclasts and bone resorption. It also acts as a negative regulator of cell motility. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212690 cd00174, SH3, Src Homology 3 domain superfamily

 Score = 45.9 bits (110), Expect = 6e-07
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 74  VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
              ALY ++A +  +LS +KG    V++   + WW+ +   G  
Sbjct: 1   YARALYDYEAQDDDELSFKKGDIITVLEKDDDGWWEGELNGGRE 44

Src Homology 3 (SH3) domains are protein interaction domains that bind proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. Thus, they are referred to as proline-recognition domains (PRDs). SH3 domains are less selective and show more diverse specificity compared to other PRDs. They have been shown to bind peptide sequences that lack the PxxP motif; examples include the PxxDY motif of Eps8 and the RKxxYxxY sequence in SKAP55. SH3 domain containing proteins play versatile and diverse roles in the cell, including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies, among others. Many members of this superfamily are adaptor proteins that associate with a number of protein partners, facilitating complex formation and signal transduction. Length = 51

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 50.5 bits (121), Expect = 6e-07
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 9/72 (12%)

Query: 429 AELMLLEELGSGQFGVVRRGKWR-----GSIDVAMM----KEGTMSEDDFIEEAKVMTRL 479
            EL  ++ LGSG FG V +G W        I VA+     +    +  + ++EA VM  +
Sbjct: 7   TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV 66

Query: 480 QHQNLVQLYGVC 491
            H ++V+L G+C
Sbjct: 67  DHPHVVRLLGIC 78

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 51.6 bits (123), Expect = 6e-07
 Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 11/91 (12%)

Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDD--FIEE 472
           +WE     L+L   LGSG FG V  G   G         + V M+K    S +    + E
Sbjct: 31  RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSE 90

Query: 473 AKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
            K+MT L  H N+V L G C+K  PIYI+T+
Sbjct: 91  LKIMTHLGPHLNIVNLLGACTKSGPIYIITE 121

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|198226 cd10363, SH2_Src_HCK, Src homology 2 (SH2) domain found in HCK

 Score = 47.7 bits (113), Expect = 6e-07
 Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 4/77 (5%)

Query: 336 GCFVVRNS-STKGLYTLSLYTKVPH--PHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
           G F++R+S +TKG Y+LS+    P     VKHY I+    G F++S +    ++ E+V++
Sbjct: 27  GSFMIRDSETTKGSYSLSVRDYDPQHGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDH 86

Query: 393 HRHNSGGLASRLKTSPC 409
           ++  + GL  +L + PC
Sbjct: 87  YKKGNDGLCQKL-SVPC 102

HCK is a member of the Src non-receptor type tyrosine kinase family of proteins and is expressed in hemopoietic cells. HCK is proposed to couple the Fc receptor to the activation of the respiratory burst. It may also play a role in neutrophil migration and in the degranulation of neutrophils. It has two different translational starts that have different subcellular localization. HCK has been shown to interact with BCR gene, ELMO1 Cbl gene, RAS p21 protein activator 1, RASA3, Granulocyte colony-stimulating factor receptor, ADAM15 and RAPGEF1. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its C-terminal tail. In general SH2 domains are involved in signal transduction. HCK has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|212789 cd11855, SH3_Sho1p, Src homology 3 domain of High osmolarity signaling protein Sho1p

 Score = 45.9 bits (109), Expect = 7e-07
 Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 130 ALYPFKA--IEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
           ALYP+ A   +  +LS EKG   EV D T   WW+ +  NG  G  PSNY+
Sbjct: 4   ALYPYDASPDDPNELSFEKGEILEVSD-TSGKWWQARKSNGETGICPSNYL 53

Sho1p (or Sho1), also called SSU81 (Suppressor of SUA8-1 mutation), is a yeast membrane protein that regulates adaptation to high salt conditions by activating the HOG (high-osmolarity glycerol) pathway. High salt concentrations lead to the localization to the membrane of the MAPKK Pbs2, which is then activated by the MAPKK Ste11 and in turn, activates the MAPK Hog1. Pbs2 is localized to the membrane though the interaction of its PxxP motif with the SH3 domain of Sho1p. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212790 cd11856, SH3_p47phox_like, Src homology 3 domains of the p47phox subunit of NADPH oxidase and similar domains

 Score = 45.7 bits (109), Expect = 7e-07
 Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           VA+  ++A    ++SL++G   EV++     WW V+ K    G++P++Y++ 
Sbjct: 3   VAIADYEAQGDDEISLQEGEVVEVLEKNDSGWWYVR-KGDKEGWVPASYLEP 53

This family is composed of the tandem SH3 domains of p47phox subunit of NADPH oxidase and Nox Organizing protein 1 (NoxO1), the four SH3 domains of Tks4 (Tyr kinase substrate with four SH3 domains), the five SH3 domains of Tks5, the SH3 domain of obscurin, Myosin-I, and similar domains. Most members of this group also contain Phox homology (PX) domains, except for obscurin and Myosin-I. p47phox and NoxO1 are regulators of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox) and nonphagocytic NADPH oxidase Nox1, respectively. They play roles in the activation of their respective NADPH oxidase, which catalyzes the transfer of electrons from NADPH to molecular oxygen to form superoxide. Tks proteins are Src substrates and scaffolding proteins that play important roles in the formation of podosomes and invadopodia, the dynamic actin-rich structures that are related to cell migration and cancer cell invasion. Obscurin is a giant muscle protein that plays important roles in the organization and assembly of the myofibril and the sarcoplasmic reticulum. Type I myosins (Myosin-I) are actin-dependent motors in endocytic actin structures and actin patches. They play roles in membrane traffic in endocytic and secretory pathways, cell motility, and mechanosensing. Myosin-I contains an N-terminal actin-activated ATPase, a phospholipid-binding TH1 (tail homology 1) domain, and a C-terminal extension which includes an F-actin-binding TH2 domain, an SH3 domain, and an acidic peptide that participates in activating the Arp2/3complex. The SH3 domain of myosin-I is required for myosin-I-induced actin polymerization. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 49.7 bits (119), Expect = 1e-06
 Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 5/49 (10%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRE 47
           M  GSLL +LR  E   G  + +  L+DM  QV +GMAYLE  N IHR+
Sbjct: 84  MEKGSLLAFLRSPE---GQVLPVASLIDMACQVAEGMAYLEEQNSIHRD 129

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 50.3 bits (120), Expect = 1e-06
 Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 13/96 (13%)

Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
           KWE     L+L + LG G FG V R +  G          ++ V M+K+    +D  D I
Sbjct: 6   KWEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLI 65

Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
            E ++M  + +H+N++ L GVC++  P+Y++ + ++
Sbjct: 66  SEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAA 101

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|198218 cd10355, SH2_DAPP1_BAM32_like, Src homology 2 domain found in dual adaptor for phosphotyrosine and 3-phosphoinositides ( DAPP1)/B lymphocyte adaptor molecule of 32 kDa (Bam32)-like proteins

 Score = 46.7 bits (111), Expect = 1e-06
 Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 4/61 (6%)

Query: 256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSR 314
            WY G+++R  AE++L     +G +++RNS+   GL++LS+  K     VKH+H++    
Sbjct: 7   GWYHGNLTRHAAEALLLSNGVDGSYLLRNSNEGTGLFSLSVRAK---DSVKHFHVEYTGY 63

Query: 315 G 315
            
Sbjct: 64  S 64

DAPP1/Bam32 contains a putative myristoylation site at its N-terminus, followed by a SH2 domain, and a pleckstrin homology (PH) domain at its C-terminus. DAPP1 could potentially be recruited to the cell membrane by any of these domains. Its putative myristoylation site could facilitate the interaction of DAPP1 with the lipid bilayer. Its SH2 domain may also interact with phosphotyrosine residues on membrane-associated proteins such as activated tyrosine kinase receptors. And finally its PH domain exhibits a high-affinity interaction with the PtdIns(3,4,5)P(3) PtdIns(3,4)P(2) second messengers produced at the cell membrane following the activation of PI 3-kinases. DAPP1 is thought to interact with both tyrosine phosphorylated proteins and 3-phosphoinositides and therefore may play a role in regulating the location and/or activity of such proteins(s) in response to agonists that elevate PtdIns(3,4,5)P(3) and PtdIns(3,4)P(2). This protein is likely to play an important role in triggering signal transduction pathways that lie downstream from receptor tyrosine kinases and PI 3-kinase. It is likely that DAPP1 functions as an adaptor to recruit other proteins to the plasma membrane in response to extracellular signals. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 92

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 49.9 bits (119), Expect = 1e-06
 Identities = 19/46 (41%), Positives = 34/46 (73%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +++ SDVWA+GV MWE+ T G+ PY  ++N+E+ + + +G  L++P
Sbjct: 192 YTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQP 237

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|212754 cd11820, SH3_STAM, Src homology 3 domain of Signal Transducing Adaptor Molecules

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           V ALY F+A E  +L+ + G    V+DD+  +WWK  +  G  G  P+N+V 
Sbjct: 3   VRALYDFEAAEDNELTFKAGEIITVLDDSDPNWWKGSNHRGE-GLFPANFVT 53

STAMs were discovered as proteins that are highly phosphorylated following cytokine and growth factor stimulation. They function in cytokine signaling and surface receptor degradation, as well as regulate Golgi morphology. They associate with many proteins including Jak2 and Jak3 tyrosine kinases, Hrs, AMSH, and UBPY. STAM adaptor proteins contain VHS (Vps27, Hrs, STAM homology), ubiquitin interacting (UIM), and SH3 domains. There are two vertebrate STAMs, STAM1 and STAM2, which may be functionally redundant; vertebrate STAMs contain ITAM motifs. They are part of the endosomal sorting complex required for transport (ESCRT-0). STAM2 deficiency in mice did not cause any obvious abnormality, while STAM1 deficiency resulted in growth retardation. Loss of both STAM1 and STAM2 in mice proved lethal, indicating that STAMs are important for embryonic development. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|198198 cd09945, SH2_SHB_SHD_SHE_SHF_like, Src homology 2 domain found in SH2 domain-containing adapter proteins B, D, E, and F (SHB, SHD, SHE, SHF)

 Score = 46.7 bits (111), Expect = 1e-06
 Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 6/77 (7%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           WY G ++R  AES+L +  KEG ++VRNS STK  Y+LSL +     H++   I++N  G
Sbjct: 3   WYHGAITRIEAESLL-RPCKEGSYLVRNSESTKQDYSLSLKSAKGFMHMR---IQRNETG 58

Query: 316 EFFLSE-KHCCHSIPEV 331
           ++ L +      +IPE+
Sbjct: 59  QYILGQFSRPFETIPEM 75

SHB, SHD, SHE, and SHF are SH2 domain-containing proteins that play various roles throughout the cell. SHB functions in generating signaling compounds in response to tyrosine kinase activation. SHB contains proline-rich motifs, a phosphotyrosine binding (PTB) domain, tyrosine phosphorylation sites, and a SH2 domain. SHB mediates certain aspects of platelet-derived growth factor (PDGF) receptor-, fibroblast growth factor (FGF) receptor-, neural growth factor (NGF) receptor TRKA-, T cell receptor-, interleukin-2 (IL-2) receptor- and focal adhesion kinase- (FAK) signaling. SRC-like FYN-Related Kinase FRK/RAK (also named BSK/IYK or GTK) and SHB regulate apoptosis, proliferation and differentiation. SHB promotes apoptosis and is also required for proper mitogenicity, spreading and tubular morphogenesis in endothelial cells. SHB also plays a role in preventing early cavitation of embryoid bodies and reduces differentiation to cells expressing albumin, amylase, insulin and glucagon. SHB is a multifunctional protein that has difference responses in different cells under various conditions. SHE is expressed in heart, lung, brain, and skeletal muscle, while expression of SHD is restricted to the brain. SHF is mainly expressed in skeletal muscle, brain, liver, prostate, testis, ovary, small intestine, and colon. SHD may be a physiological substrate of c-Abl and may function as an adapter protein in the central nervous system. It is also thought to be involved in apoptotic regulation. SHD contains five YXXP motifs, a substrate sequence preferred by Abl tyrosine kinases, in addition to a poly-proline rich region and a C-terminal SH2 domain. SHE contains two pTry protein binding domains, protein interaction domain (PID) and a SH2 domain, followed by a glycine-proline rich region, all of which are N-terminal to the phosphotyrosine binding (PTB) domain. SHF contains four putative tyrosine phosphorylation sites and an SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 19/92 (20%)

Query: 430 ELMLLEELGSGQFGVVRRGKWRGSID-----------------VAMMKEGTMS--EDDFI 470
           +L L E+LG GQFG V   +  G  +                 V M++        +DF+
Sbjct: 6   QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFL 65

Query: 471 EEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +E K+M+RL++ N+++L GVC    P+ ++T+
Sbjct: 66  KEIKIMSRLKNPNIIRLLGVCVSDDPLCMITE 97

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 20/53 (37%), Positives = 34/53 (64%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +FS  SD+W+YGV++WEVF+ G  PY    N +V++ ++   +L  P
Sbjct: 196 EAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCP 248

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|198183 cd09929, SH2_BLNK_SLP-76, Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 17/35 (48%), Positives = 26/35 (74%)

Query: 254 PKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTK 288
           PK WY G++ R+ AE  L++ +K+G F+VR+SS K
Sbjct: 10  PKEWYAGNIDRKEAEEALRRSNKDGTFLVRDSSGK 44

BLNK (also known as SLP-65 or BASH) is an important adaptor protein expressed in B-lineage cells. BLNK consists of a N-terminal sterile alpha motif (SAM) domain and a C-terminal SH2 domain. BLNK is a cytoplasmic protein, but a part of it is bound to the plasma membrane through an N-terminal leucine zipper motif and transiently bound to a cytoplasmic domain of Iga through its C-terminal SH2 domain upon B cell antigen receptor (BCR)-stimulation. A non-ITAM phosphotyrosine in Iga is necessary for the binding with the BLNK SH2 domain and/or for normal BLNK function in signaling and B cell activation. Upon phosphorylation BLNK binds Btk and PLCgamma2 through their SH2 domains and mediates PLCgamma2 activation by Btk. BLNK also binds other signaling molecules such as Vav, Grb2, Syk, and HPK1. BLNK has been shown to be necessary for BCR-mediated Ca2+ mobilization, for the activation of mitogen-activated protein kinases such as ERK, JNK, and p38 in a chicken B cell line DT40, and for activation of transcription factors such as NF-AT and NF-kappaB in human or mouse B cells. BLNK is involved in B cell development, B cell survival, activation, proliferation, and T-independent immune responses. BLNK is structurally homologous to SLP-76. SLP-76 and (linker for activation of T cells) LAT are adaptor/linker proteins in T cell antigen receptor activation and T cell development. BLNK interacts with many downstream signaling proteins that interact directly with both SLP-76 and LAT. New data suggest functional complementation of SLP-76 and LAT in T cell antigen receptor function with BLNK in BCR function. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 121

>gnl|CDD|198189 cd09935, SH2_ABL, Src homology 2 (SH2) domain found in Abelson murine lymphosarcoma virus (ABL) proteins

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 4/71 (5%)

Query: 336 GCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHR 394
           G F+VR S S+ G Y++SL        V HY I ++S G+ +++++H  +++ E+V++H 
Sbjct: 25  GSFLVRESESSPGQYSISLRY---DGRVYHYRISEDSDGKVYVTQEHRFNTLAELVHHHS 81

Query: 395 HNSGGLASRLK 405
            N+ GL + L+
Sbjct: 82  KNADGLITTLR 92

ABL-family proteins are highly conserved tyrosine kinases. Each ABL protein contains an SH3-SH2-TK (Src homology 3-Src homology 2-tyrosine kinase) domain cassette, which confers autoregulated kinase activity and is common among nonreceptor tyrosine kinases. Several types of posttranslational modifications control ABL catalytic activity, subcellular localization, and stability, with consequences for both cytoplasmic and nuclear ABL functions. Binding partners provide additional regulation of ABL catalytic activity, substrate specificity, and downstream signaling. By combining this cassette with actin-binding and -bundling domain, ABL proteins are capable of connecting phosphoregulation with actin-filament reorganization. Vertebrate paralogs, ABL1 and ABL2, have evolved to perform specialized functions. ABL1 includes nuclear localization signals and a DNA binding domain which is used to mediate DNA damage-repair functions, while ABL2 has additional binding capacity for actin and for microtubules to enhance its cytoskeletal remodeling functions. SH2 is involved in several autoinhibitory mechanism that constrain the enzymatic activity of the ABL-family kinases. In one mechanism SH2 and SH3 cradle the kinase domain while a cap sequence stabilizes the inactive conformation resulting in a locked inactive state. Another involves phosphatidylinositol 4,5-bisphosphate (PIP2) which binds the SH2 domain through residues normally required for phosphotyrosine binding in the linker segment between the SH2 and kinase domains. The SH2 domain contributes to ABL catalytic activity and target site specificity. It is thought that the ABL catalytic site and SH2 pocket have coevolved to recognize the same sequences. Recent work now supports a hierarchical processivity model in which the substrate target site most compatible with ABL kinase domain preferences is phosphorylated with greatest efficiency. If this site is compatible with the ABL SH2 domain specificity, it will then reposition and dock in the SH2 pocket. This mechanism also explains how ABL kinases phosphorylates poor targets on the same substrate if they are properly positioned and how relatively poor substrate proteins might be recruited to ABL through a complex with strong substrates that can also dock with the SH2 pocket. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 94

>gnl|CDD|198186 cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src homology 2 (C-SH2) domain in Phospholipase C gamma

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)

Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNS 313
           K W+  +++R++AE +L +  ++G F+VR S T    + +S         +KH  IKQ  
Sbjct: 4   KEWFHANLTREQAEEMLMRVPRDGAFLVRPSETDPNSFAISFRA---EGKIKHCRIKQEG 60

Query: 314 R 314
           R
Sbjct: 61  R 61

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 49.1 bits (117), Expect = 2e-06
 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M +G+LL+YLR         V +LL M  Q+   M YLE+ N+IHR+
Sbjct: 84  MTYGNLLDYLRECNRQEVNAV-VLLYMATQISSAMEYLEKKNFIHRD 129

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|212929 cd11996, SH3_Intersectin2_5, Fifth Src homology 3 domain (or SH3E) of Intersectin-2

 Score = 44.2 bits (104), Expect = 2e-06
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           V+A+Y + A    +LS  KG    V++     WW+  + NG  G  PSNYVK
Sbjct: 3   VIAMYDYTANNEDELSFSKGQLINVLNKDDPDWWQ-GEINGVTGLFPSNYVK 53

Intersectin-2 (ITSN2) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN2 also functions as a specific GEF for Cdc42 activation in epithelial morphogenesis, and is required in mitotic spindle orientation. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The fifth SH3 domain (or SH3E) of ITSN2 is expected to bind protein partners, similar to ITSN1 which has been shown to bind many protein partners including SGIP1, Sos1, dynamin1/2, CIN85, c-Cbl, SHIP2, N-WASP, and synaptojanin-1, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 49.5 bits (118), Expect = 2e-06
 Identities = 21/47 (44%), Positives = 34/47 (72%), Gaps = 1/47 (2%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YG+L+WE+F+ GK PY G L N++    V+RG  + +P
Sbjct: 291 YTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRP 337

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 7/50 (14%)

Query: 1   MRHGSLLNYLR---RHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  GSL++YLR   R   TL       L   + VC+GM YLE  N++HR+
Sbjct: 82  MAKGSLVDYLRSRGRAVITLAQ----QLGFALDVCEGMEYLEEKNFVHRD 127

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 48.7 bits (116), Expect = 3e-06
 Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 8/85 (9%)

Query: 426 IDPAELMLLEELGSGQFGVVRRGKWR--GSIDVAM----MKEGTMSED--DFIEEAKVMT 477
           ID + + + + +G+G+FG V  G+ +  G  ++ +    +K G   +   DF+ EA +M 
Sbjct: 1   IDASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMG 60

Query: 478 RLQHQNLVQLYGVCSKHRPIYIVTD 502
           +  H N++ L GV +K +P+ IVT+
Sbjct: 61  QFDHPNIIHLEGVVTKSKPVMIVTE 85

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|198193 cd09940, SH2_Vav_family, Src homology 2 (SH2) domain found in the Vav family

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)

Query: 336 GCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHR 394
           G ++VR     +  Y LS+        VKH  I+Q S G ++LSE     S+ E+VNY+ 
Sbjct: 27  GTYLVRVRPQGETQYALSIKYNG---DVKHMKIEQRSDGLYYLSESRHFKSLVELVNYYE 83

Query: 395 HNS 397
            NS
Sbjct: 84  RNS 86

Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, Vav2 and Vav3 are more ubiquitously expressed. The members here include insect and amphibian Vavs. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 102

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 48.9 bits (116), Expect = 3e-06
 Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 2/47 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M HG LL+Y+  H++ +G    LLL+ C+Q+ KGM YLE    +HR+
Sbjct: 90  MPHGCLLDYVHEHKDNIGSQ--LLLNWCVQIAKGMMYLEERRLVHRD 134

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|212705 cd11771, SH3_Pex13p_fungal, Src Homology 3 domain of fungal peroxisomal membrane protein Pex13p

 Score = 44.2 bits (105), Expect = 3e-06
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 6/55 (10%)

Query: 130 ALYPFK-AIEGGDLSLEKGAEYEVMD--DTQEH---WWKVKDKNGSVGYIPSNYV 178
           ALY F       +LSL+KG    V+   D       WWK + ++G +G+ PSNYV
Sbjct: 4   ALYDFTPENPEMELSLKKGDIVAVLSKTDPLGRDSEWWKGRTRDGRIGWFPSNYV 58

Pex13p, located in the peroxisomal membrane, contains two transmembrane regions and a C-terminal SH3 domain. It binds to the peroxisomal targeting type I (PTS1) receptor Pex5p and the docking factor Pex14p through its SH3 domain. It is essential for both PTS1 and PTS2 protein import pathways into the peroxisomal matrix. Pex13p binds Pex14p, which contains a PxxP motif, in a classical fashion to the proline-rich ligand binding site of its SH3 domain. It binds the WxxxF/Y motif of Pex5p in a novel site that does not compete with Pex14p binding. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 60

>gnl|CDD|212738 cd11804, SH3_GRB2_like_N, N-terminal Src homology 3 domain of Growth factor receptor-bound protein 2 (GRB2) and related proteins

 Score = 44.3 bits (105), Expect = 3e-06
 Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYV 178
           VA + FKA    +LS +KG+  +V++ +   +W+K  + +G  G IP NY+
Sbjct: 3   VAKHDFKATAEDELSFKKGSILKVLNMEDDPNWYKA-ELDGKEGLIPKNYI 52

This family includes the adaptor protein GRB2 and related proteins including Drosophila melanogaster Downstream of receptor kinase (DRK), Caenorhabditis elegans Sex muscle abnormal protein 5 (Sem-5), GRB2-related adaptor protein (GRAP), GRAP2, and similar proteins. Family members contain an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. GRB2/Sem-5/DRK is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. GRAP2 plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. GRAP acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. The N-terminal SH3 domain of GRB2 binds to Sos and Sos-derived proline-rich peptides. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212807 cd11874, SH3_CD2AP-like_2, Second Src Homology 3 domain (SH3B) of CD2-associated protein and similar proteins

 Score = 44.2 bits (105), Expect = 3e-06
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            L+ +      +L L+ G   EV+ + +E WW+ K  NG VG  PSN+VKE
Sbjct: 4   VLFSYTPQNEDELELKVGDTIEVLGEVEEGWWEGK-LNGKVGVFPSNFVKE 53

This subfamily is composed of the second SH3 domain (SH3B) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3B of both proteins have been shown to bind to Cbl. In the case of CD2AP, its SH3B binds to Cbl at a site distinct from the c-Cbl/SH3A binding site. The CIN85 SH3B also binds ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|198282 cd10419, SH2_Src_Fyn_isoform_b_like, Src homology 2 (SH2) domain found in Fyn isoform b like proteins

 Score = 45.4 bits (107), Expect = 3e-06
 Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 255 KAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIK 310
           + WY G + R+ AE  +L   +  G F++R S +TKG Y+LS+  +  +   HVKHY I+
Sbjct: 3   EEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIR 62

Query: 311 QNSRGEFFLSEK 322
           +   G ++++ +
Sbjct: 63  KLDNGGYYITTR 74

Fyn is a member of the Src non-receptor type tyrosine kinase family of proteins. This cd contains the SH2 domain found in Fyn isoform b type proteins. Fyn is involved in the control of cell growth and is required in the following pathways: T and B cell receptor signaling, integrin-mediated signaling, growth factor and cytokine receptor signaling, platelet activation, ion channel function, cell adhesion, axon guidance, fertilization, entry into mitosis, and differentiation of natural killer cells, oligodendrocytes and keratinocytes. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and interacts with the Fyn-binding protein. Alternatively spliced transcript variants encoding distinct isoforms exist. Fyn is primarily localized to the cytoplasmic leaflet of the plasma membrane. Tyrosine phosphorylation of target proteins by Fyn serves to either regulate target protein activity, and/or to generate a binding site on the target protein that recruits other signaling molecules. FYN has been shown to interact with a number of proteins including: BCAR1, Cbl, Janus kinase, nephrin, Sky, tyrosine kinase, Wiskott-Aldrich syndrome protein, and Zap-70. Fyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|212832 cd11899, SH3_Nck2_1, First Src Homology 3 domain of Nck2 adaptor protein

 Score = 44.0 bits (103), Expect = 3e-06
 Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
           +V+A + + A +  +L ++K     ++DD++  WW+V++     GY+PSNYV+ K
Sbjct: 5   IVIAKWDYTAQQDQELDIKKNERLWLLDDSKT-WWRVRNAANRTGYVPSNYVERK 58

Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds neuronal signaling proteins such as ephrinB and Disabled-1 (Dab-1) exclusively. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The first SH3 domain of Nck2 binds the PxxDY sequence in the CD3e cytoplasmic tail; this binding inhibits phosphorylation by Src kinases, resulting in the downregulation of TCR surface expression. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|198229 cd10366, SH2_Src_Yes, Src homology 2 (SH2) domain found in Yes

 Score = 45.4 bits (107), Expect = 3e-06
 Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 4/74 (5%)

Query: 253 KPKAWYVGDMSRQRAESILKQE-DKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
           + + WY G M R+ AE +L    ++ G F+VR S +TKG Y+LS+  + +V   +VKHY 
Sbjct: 1   QAEEWYFGKMGRKDAERLLLNPGNQRGIFLVRESETTKGAYSLSIRDWDEVRGDNVKHYK 60

Query: 309 IKQNSRGEFFLSEK 322
           I++   G ++++ +
Sbjct: 61  IRKLDNGGYYITTR 74

Yes is a member of the Src non-receptor type tyrosine kinase family of proteins. Yes is the cellular homolog of the Yamaguchi sarcoma virus oncogene. In humans it is encoded by the YES1 gene which maps to chromosome 18 and is in close proximity to thymidylate synthase. A corresponding Yes pseudogene has been found on chromosome 22. YES1 has been shown to interact with Janus kinase 2, CTNND1,RPL10, and Occludin. Yes1 has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 48.1 bits (114), Expect = 4e-06
 Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 5/53 (9%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
           M  GSLL++L+  E   GG V L  L+D   Q+ +GMAY+ER NYIHR+ + +
Sbjct: 83  MAKGSLLDFLKSDE---GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAA 132

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 48.3 bits (115), Expect = 4e-06
 Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 1/47 (2%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YG+L+WE+F+ G  PY G   +++    ++ G  + +P
Sbjct: 220 YTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQP 266

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 48.1 bits (114), Expect = 4e-06
 Identities = 20/47 (42%), Positives = 31/47 (65%)

Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           RF+ +SDVW+YGV +WE+ T G  PY  +   E+ D +++G  L +P
Sbjct: 187 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQP 233

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|212701 cd11767, SH3_Nck_3, Third Src Homology 3 domain of Nck adaptor proteins

 Score = 43.5 bits (103), Expect = 5e-06
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 74  VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNG 115
           VVVALYPF      +LS EKG   E+++  +    WWK ++  G
Sbjct: 1   VVVALYPFTGENDEELSFEKGERLEIIEKPEDDPDWWKARNALG 44

This group contains the third SH3 domain of Nck, the first SH3 domain of Caenorhabditis elegans Ced-2 (Cell death abnormality protein 2), and similar domains. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4), which show partly overlapping functions but also bind distinct targets. Their SH3 domains are involved in recruiting downstream effector molecules, such as the N-WASP/Arp2/3 complex, which when activated induces actin polymerization that results in the production of pedestals, or protrusions of the plasma membrane. The third SH3 domain of Nck appears to prefer ligands with a PxAPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. Ced-2 is a cell corpse engulfment protein that interacts with Ced-5 in a pathway that regulates the activation of Ced-10, a Rac small GTPase. Length = 56

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 47.9 bits (114), Expect = 5e-06
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 4/51 (7%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL----LLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+YLR       G   L    LLD+C+ V KG  YLE+ ++IHR+
Sbjct: 81  MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRD 131

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|198231 cd10368, SH2_Src_Fyn, Src homology 2 (SH2) domain found in Fyn

 Score = 45.0 bits (106), Expect = 5e-06
 Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 255 KAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIK 310
           + WY G + R+ AE  +L   +  G F++R S +TKG Y+LS+  +  +   HVKHY I+
Sbjct: 3   EEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIR 62

Query: 311 QNSRGEFFLSEK 322
           +   G ++++ +
Sbjct: 63  KLDNGGYYITTR 74

Fyn is a member of the Src non-receptor type tyrosine kinase family of proteins. Fyn is involved in the control of cell growth and is required in the following pathways: T and B cell receptor signaling, integrin-mediated signaling, growth factor and cytokine receptor signaling, platelet activation, ion channel function, cell adhesion, axon guidance, fertilization, entry into mitosis, and differentiation of natural killer cells, oligodendrocytes and keratinocytes. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and interacts with the Fyn-binding protein. Alternatively spliced transcript variants encoding distinct isoforms exist. Fyn is primarily localized to the cytoplasmic leaflet of the plasma membrane. Tyrosine phosphorylation of target proteins by Fyn serves to either regulate target protein activity, and/or to generate a binding site on the target protein that recruits other signaling molecules. FYN has been shown to interact with a number of proteins including: BCAR1, Cbl, Janus kinase, nephrin, Sky, tyrosine kinase, Wiskott-Aldrich syndrome protein, and Zap-70. Fyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198281 cd10418, SH2_Src_Fyn_isoform_a_like, Src homology 2 (SH2) domain found in Fyn isoform a like proteins

 Score = 45.0 bits (106), Expect = 5e-06
 Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 255 KAWYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIK 310
           + WY G + R+ AE  +L   +  G F++R S +TKG Y+LS+  +  +   HVKHY I+
Sbjct: 3   EEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIR 62

Query: 311 QNSRGEFFLSEK 322
           +   G ++++ +
Sbjct: 63  KLDNGGYYITTR 74

Fyn is a member of the Src non-receptor type tyrosine kinase family of proteins. This cd contains the SH2 domain found in Fyn isoform a type proteins. Fyn is involved in the control of cell growth and is required in the following pathways: T and B cell receptor signaling, integrin-mediated signaling, growth factor and cytokine receptor signaling, platelet activation, ion channel function, cell adhesion, axon guidance, fertilization, entry into mitosis, and differentiation of natural killer cells, oligodendrocytes and keratinocytes. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and interacts with the Fyn-binding protein. Alternatively spliced transcript variants encoding distinct isoforms exist. Fyn is primarily localized to the cytoplasmic leaflet of the plasma membrane. Tyrosine phosphorylation of target proteins by Fyn serves to either regulate target protein activity, and/or to generate a binding site on the target protein that recruits other signaling molecules. FYN has been shown to interact with a number of proteins including: BCAR1, Cbl, Janus kinase, nephrin, Sky, tyrosine kinase, Wiskott-Aldrich syndrome protein, and Zap-70. Fyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|213009 cd12076, SH3_Tks4_2, Second Src homology 3 domain of Tyrosine kinase substrate with four SH3 domains

 Score = 43.5 bits (102), Expect = 5e-06
 Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             +YP+ A +  +++LEKGA  EV+    E WWK++ + G  G+ P++Y+K+
Sbjct: 4   TVIYPYTARDQDEINLEKGAVVEVIQKNLEGWWKIRYQ-GKEGWAPASYLKK 54

Tks4, also called SH3 and PX domain-containing protein 2B (SH3PXD2B) or HOFI, is a Src substrate and scaffolding protein that plays an important role in the formation of podosomes and invadopodia, the dynamic actin-rich structures that are related to cell migration and cancer cell invasion. It is required in the formation of functional podosomes, EGF-induced membrane ruffling, and lamellipodia generation. It plays an important role in cellular attachment and cell spreading. Tks4 is essential for the localization of MT1-MMP (membrane-type 1 matrix metalloproteinase) to invadopodia. It contains an N-terminal Phox homology (PX) domain and four SH3 domains. This model characterizes the second SH3 domain of Tks4. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 47.3 bits (112), Expect = 6e-06
 Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 5/53 (9%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
           M  GSLL++L+  E   G  + L  L+DM  QV  GMAY+ER NYIHR+ + +
Sbjct: 82  MSKGSLLDFLKDGE---GRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSA 131

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 47.7 bits (113), Expect = 6e-06
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 9/80 (11%)

Query: 430 ELMLLEELGSGQFGVVRRGKW--------RGSIDVAMMKEGTMS-EDDFIEEAKVMTRLQ 480
           +++L  ELG G FG V   +         +  + V  +KE + S   DF  EA+++T LQ
Sbjct: 6   DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQ 65

Query: 481 HQNLVQLYGVCSKHRPIYIV 500
           HQ++V+ YGVC++ RP+ +V
Sbjct: 66  HQHIVRFYGVCTEGRPLLMV 85

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 47.8 bits (114), Expect = 6e-06
 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%)

Query: 4   GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           GSL +YL+RH + +  N+  LL    Q+CKGM YL    YIHR+
Sbjct: 93  GSLRDYLQRHRDQI--NLKRLLLFSSQICKGMDYLGSQRYIHRD 134

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 48.1 bits (114), Expect = 6e-06
 Identities = 19/46 (41%), Positives = 31/46 (67%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVLMWE+FT G  PY  +   E+   ++ G  ++KP
Sbjct: 216 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 261

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 48.1 bits (114), Expect = 6e-06
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 90  MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEERRLVHRD 134

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 47.5 bits (113), Expect = 6e-06
 Identities = 19/52 (36%), Positives = 34/52 (65%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  + + ++   + +G  L +P+
Sbjct: 174 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPE 225

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 47.3 bits (112), Expect = 7e-06
 Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 3/48 (6%)

Query: 1   MRHGSLLNYLR-RHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  GSL++YLR R  + LGG+   LL   + VC+ M YLE +N++HR+
Sbjct: 82  MAKGSLVDYLRSRGRSVLGGDC--LLKFSLDVCEAMEYLEANNFVHRD 127

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|212833 cd11900, SH3_Nck1_1, First Src Homology 3 domain of Nck1 adaptor protein

 Score = 43.2 bits (101), Expect = 7e-06
 Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
           VVVA + + A +  +L ++K     ++DD++  WW+V++     G++PSNYV+ K
Sbjct: 4   VVVAKFDYVAQQDQELDIKKNERLWLLDDSKS-WWRVRNAMNKTGFVPSNYVERK 57

Nck1 (also called Nckalpha) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds and activates RasGAP, resulting in the downregulation of Ras. It is also involved in the signaling of endothilin-mediated inhibition of cell migration. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The first SH3 domain of Nck1 binds the PxxDY sequence in the CD3e cytoplasmic tail; this binding inhibits phosphorylation by Src kinases, resulting in the downregulation of TCR surface expression. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 47.6 bits (113), Expect = 7e-06
 Identities = 16/37 (43%), Positives = 28/37 (75%), Gaps = 1/37 (2%)

Query: 208 RFSSKSDVWAYGVLMWEVFT-CGKMPYGRLKNTEVVD 243
           +F++ SDVWA+GV +WE+ T C + PY +L + +V++
Sbjct: 208 KFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE 244

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 47.2 bits (112), Expect = 8e-06
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 11/75 (14%)

Query: 437 LGSGQFGVVRRGKWR-------GSIDVAM--MKEGTMSED--DFIEEAKVMTRLQHQNLV 485
           LGSG FG V  G          G I VA+  +++G   ++  +F++EA +M+   H N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 486 QLYGVCSKHRPIYIV 500
           +L GVC  + P YI+
Sbjct: 63  KLLGVCLLNEPQYII 77

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|212840 cd11907, SH3_TXK, Src Homology 3 domain of TXK, also called Resting lymphocyte kinase (Rlk)

 Score = 42.6 bits (100), Expect = 9e-06
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           V ALY F   E  +L+L++  EY +++    HWWK +D+ G
Sbjct: 3   VKALYDFLPREPSNLALKRAEEYLILEQYDPHWWKARDRYG 43

TXK is a cytoplasmic (or nonreceptor) tyr kinase containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. It also contains an N-terminal cysteine-rich region. Rlk is expressed in T-cells and mast cell lines, and is a key component of T-cell receptor (TCR) signaling. It is important in TCR-stimulated proliferation, IL-2 production and phospholipase C-gamma1 activation. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 47.7 bits (113), Expect = 9e-06
 Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           +++ SDVW++G+L+WE+FT G  PY  L  N +  + ++RG  + KP
Sbjct: 318 YTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKP 364

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|212883 cd11950, SH3_GRAP2_C, C-terminal Src homology 3 domain of GRB2-related adaptor protein 2

 Score = 42.5 bits (100), Expect = 9e-06
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           V ALY F+A+E  +L    G   EV+D +   WWK +   G +G  P+NYV 
Sbjct: 2   VRALYDFEALEDDELGFNSGDVIEVLDSSNPSWWKGRLH-GKLGLFPANYVA 52

GRAP2 is also called GADS (GRB2-related adapter downstream of Shc), GrpL, GRB2L, Mona, or GRID (Grb2-related protein with insert domain). It is expressed specifically in the hematopoietic system. It plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. It also has roles in antigen-receptor and tyrosine kinase mediated signaling. GRAP2 is unique from other GRB2-like adaptor proteins in that it can be regulated by caspase cleavage. It contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domain of GRAP2 binds to different motifs found in substrate peptides including the typical PxxP motif in hematopoietic progenitor kinase 1 (HPK1), the RxxK motif in SLP-76 and HPK1, and the RxxxxK motif in phosphatase-like protein HD-PTP. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 46.6 bits (111), Expect = 1e-05
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 9/85 (10%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVAMMKEGTMSEDD----FIEEAKV 475
           +EI   ++ L   +G GQFG V +G +       I VA+      +       F++EA +
Sbjct: 1   YEIQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYI 60

Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIV 500
           M +  H ++V+L GV +++ P++IV
Sbjct: 61  MRQFDHPHIVKLIGVITEN-PVWIV 84

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|212775 cd11841, SH3_SH3YL1_like, Src homology 3 domain of SH3 domain containing Ysc84-like 1 (SH3YL1) protein

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)

Query: 74  VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWW--KVKDKNGI 116
            V ALY F+  +  DLS + G    V+   D+Q  WW  +++ + GI
Sbjct: 1   EVTALYSFEGQQPCDLSFQAGDRITVLTRTDSQFDWWEGRLRGRVGI 47

SH3YL1 localizes to the plasma membrane and is required for dorsal ruffle formation. It binds phosphoinositides (PIs) with high affinity through its N-terminal SYLF domain (also called DUF500). In addition, SH3YL1 contains a C-terminal SH3 domain which has been reported to bind to N-WASP, dynamin 2, and SHIP2 (a PI 5-phosphatase). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 18/46 (39%), Positives = 31/46 (67%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW++G+LMWE+FT G  PY  +   E+   ++ G  ++KP
Sbjct: 213 YTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKP 258

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|198180 cd09926, SH2_CRK_like, Src homology 2 domain found in cancer-related signaling adaptor protein CRK

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 2/40 (5%)

Query: 256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLS 294
           +WY G MSRQ A+ +L Q  + G F+VR+SST  G Y LS
Sbjct: 8   SWYFGPMSRQEAQELL-QGQRHGVFLVRDSSTIPGDYVLS 46

SH2 domain in the CRK proteins. CRKI (SH2-SH3) and CRKII (SH2-SH3-SH3) are splicing isoforms of the oncoprotein CRK. CRKs regulate transcription and cytoskeletal reorganization for cell growth and motility by linking tyrosine kinases to small G proteins. The SH2 domain of CRK associates with tyrosine-phosphorylated receptors or components of focal adhesions, such as p130Cas and paxillin. CRK transmits signals to small G proteins through effectors that bind its SH3 domain, such as C3G, the guanine-nucleotide exchange factor (GEF) for Rap1 and R-Ras, and DOCK180, the GEF for Rac6. The binding of p130Cas to the CRK-C3G complex activates Rap1, leading to regulation of cell adhesion, and activates R-Ras, leading to JNK-mediated activation of cell proliferation, whereas the binding of CRK DOCK180 induces Rac1-mediated activation of cellular migration. The activity of the different splicing isoforms varies greatly with CRKI displaying substantial transforming activity, CRKII less so, and phosphorylated CRKII with no biological activity whatsoever. CRKII has a linker region with a phosphorylated Tyr and an additional C-terminal SH3 domain. The phosphorylated Tyr creates a binding site for its SH2 domain which disrupts the association between CRK and its SH2 target proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|212697 cd11763, SH3_SNX9_like, Src Homology 3 domain of Sorting Nexin 9 and similar proteins

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 130 ALYPFKAIEGGDLSLEKGAEYEVM-DDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           ALY F +   G+LSL  G    +   D  + W + ++  G VG  PS+YV+ 
Sbjct: 4   ALYDFDSQPSGELSLRAGEVLTITRQDVGDGWLEGRNSRGEVGLFPSSYVEI 55

Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. This subfamily consists of SH3 domain containing SNXs including SNX9, SNX18, SNX33, and similar proteins. SNX9 is localized to plasma membrane endocytic sites and acts primarily in clathrin-mediated endocytosis, while SNX18 is localized to peripheral endosomal structures, and acts in a trafficking pathway that is clathrin-independent but relies on AP-1 and PACS1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 47.3 bits (112), Expect = 1e-05
 Identities = 18/46 (39%), Positives = 31/46 (67%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+FT G  PY  +   E+   ++ G  ++KP
Sbjct: 213 YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 258

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|212757 cd11823, SH3_Nostrin, Src homology 3 domain of Nitric Oxide Synthase TRaffic INducer

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            ALY + A    +LSL+ G   EV +   + WW + + NG  G  P+ YV+E
Sbjct: 3   KALYSYTANREDELSLQPGDIIEVHEKQDDGWW-LGELNGKKGIFPATYVEE 53

Nostrin is expressed in endothelial and epithelial cells and is involved in the regulation, trafficking and targeting of endothelial NOS (eNOS). It facilitates the endocytosis of eNOS by coordinating the functions of dynamin and the Wiskott-Aldrich syndrome protein (WASP). Increased expression of Nostrin may be correlated to preeclampsia. Nostrin contains an N-terminal F-BAR domain and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|198211 cd10348, SH2_Cterm_shark_like, C-terminal Src homology 2 (SH2) domain found in SH2 domains, ANK, and kinase domain (shark) proteins

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 7/80 (8%)

Query: 257 WYVGDMSRQRAESILKQE-DKEGCFVVRNSSTK-GLYTLSL-YTKVPHPHVKHYHIKQNS 313
           W  G + R  A  ILKQ+ D +G F+VR S  + G Y L+L Y      HV H+ I+   
Sbjct: 2   WLHGALDRNEAVEILKQKADADGSFLVRYSRRRPGGYVLTLVYEN----HVYHFEIQNRD 57

Query: 314 RGEFFLSEKHCCHSIPEVKD 333
              F++ +     S+  + +
Sbjct: 58  DKWFYIDDGPYFESLEHLIE 77

These non-receptor protein-tyrosine kinases contain two SH2 domains, five ankyrin (ANK)-like repeats, and a potential tyrosine phosphorylation site in its carboxyl-terminal tail which resembles the phosphorylation site in members of the src family. Like, mammalian non-receptor protein-tyrosine kinases, ZAP-70 and syk proteins, they do not have SH3 domains. However, the presence of ANK makes these unique among protein-tyrosine kinases. Both tyrosine kinases and ANK repeats have been shown to transduce developmental signals, and SH2 domains are known to participate intimately in tyrosine kinase signaling. These tyrosine kinases are believed to be involved in epithelial cell polarity. The members of this family include the shark (SH2 domains, ANK, and kinase domain) gene in Drosophila and yellow fever mosquitos, as well as the hydra protein HTK16. Drosophila Shark is proposed to transduce intracellularly the Crumbs, a protein necessary for proper organization of ectodermal epithelia, intercellular signal. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 86

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 46.2 bits (110), Expect = 2e-05
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M +GSL  +LR ++      VG L+ M   +  GM YL   NY+HR+
Sbjct: 87  MENGSLDKFLRENDGKF--TVGQLVGMLRGIASGMKYLSEMNYVHRD 131

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 46.2 bits (110), Expect = 2e-05
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 7/54 (12%)

Query: 1   MRHGSLLNYLRRH----ENTLGGNV---GLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G L +YLR      EN  G         + M  ++  GMAYL    ++HR+
Sbjct: 91  MAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRD 144

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|212767 cd11833, SH3_Stac_1, First C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing (Stac) proteins

 Score = 41.7 bits (98), Expect = 2e-05
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 76  VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
           VALY FK  E  DL +  G +  ++DD+ E WWK K
Sbjct: 3   VALYKFKPQENEDLEMRPGDKITLLDDSNEDWWKGK 38

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac1 and Stac3 contain two SH3 domains while Stac2 contains a single SH3 domain at the C-terminus. This model represents the first C-terminal SH3 domain of Stac1 and Stac3, and the single C-terminal SH3 domain of Stac2. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 46.2 bits (109), Expect = 2e-05
 Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 13/96 (13%)

Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
           KWE+    L L + LG G FG V   +  G          ++ V M+K+    +D  D +
Sbjct: 6   KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLV 65

Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
            E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 66  SEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYAS 101

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 46.5 bits (110), Expect = 2e-05
 Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 1/48 (2%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
           ++++SDVW++GVL+WE+F+ G  PY G   N E   R++ G  +  P+
Sbjct: 253 YTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPE 300

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|198217 cd10354, SH2_Cterm_RasGAP, C-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 5/78 (6%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           W+ G +SR+ A ++L +    G F+VR S +T G Y+LS      +  +KH+ I      
Sbjct: 2   WFHGKISREEAYNMLVKVGGPGSFLVRESDNTPGDYSLSFRV---NEGIKHFKIIPTGNN 58

Query: 316 EFFLSEKHCCHSIPEVKD 333
           +F +  +    S+ +V D
Sbjct: 59  QFMMGGR-YFSSLDDVID 75

RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the C-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 77

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 2/61 (3%)

Query: 197 LELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRV--QRGIILEKP 254
           +E+  Q L     + KS++W+ GV MWE+FT    PY  L + +V+ +V  ++ I L KP
Sbjct: 174 VEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKP 233

Query: 255 K 255
           +
Sbjct: 234 Q 234

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 46.2 bits (109), Expect = 2e-05
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 258 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 304

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 17/47 (36%), Positives = 31/47 (65%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F++ SD+W++GV++WE+ +  + PY  L N +V+  V  G  L++P 
Sbjct: 198 FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 244

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|212928 cd11995, SH3_Intersectin1_5, Fifth Src homology 3 domain (or SH3E) of Intersectin-1

 Score = 41.5 bits (97), Expect = 2e-05
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           V+ +Y + A    +L+  KG    V++     WWK  + NG VG  PSNYVK
Sbjct: 3   VIGMYDYTAQNDDELAFSKGQIINVLNKEDPDWWK-GELNGQVGLFPSNYVK 53

Intersectin-1 (ITSN1) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN1 localizes in membranous organelles, CCPs, the Golgi complex, and may be involved in the cell membrane trafficking system. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The fifth SH3 domain (or SH3E) of ITSN1 has been shown to bind many protein partners including SGIP1, Sos1, dynamin1/2, CIN85, c-Cbl, SHIP2, N-WASP, and synaptojanin-1, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212734 cd11800, SH3_DNMBP_C2_like, Second C-terminal Src homology 3 domain of Dynamin Binding Protein, also called Tuba, and similar domains

 Score = 41.6 bits (98), Expect = 2e-05
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQ--EHWWKVKDKNGSVGYIPSNY 177
              ALY F+A   G+LS+ +G    V++  D +    WW V+D  G  GY+PSNY
Sbjct: 1   YYYALYTFEARSPGELSVTEGQVVTVLEKHDLKGNPEWWLVED-RGKQGYVPSNY 54

DNMBP or Tuba is a cdc42-specific guanine nucleotide exchange factor (GEF) that contains four N-terminal SH3 domains, a central RhoGEF [or Dbl homology (DH)] domain followed by a Bin/Amphiphysin/Rvs (BAR) domain, and two C-terminal SH3 domains. It provides a functional link between dynamin, Rho GTPase signaling, and actin dynamics. It plays an important role in regulating cell junction configuration. The C-terminal SH3 domains of DNMBP bind to N-WASP and Ena/VASP proteins, which are key regulatory proteins of the actin cytoskeleton. Also included in this subfamily is the second C-terminal SH3 domain of Rho guanine nucleotide exchange factor 37 (ARHGEF37), whose function is still unknown. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 16/37 (43%), Positives = 27/37 (72%), Gaps = 1/37 (2%)

Query: 208 RFSSKSDVWAYGVLMWEVFT-CGKMPYGRLKNTEVVD 243
           +F++ SDVWA+GV +WE+   C + PYG L + +V++
Sbjct: 216 KFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIE 252

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|198225 cd10362, SH2_Src_Lck, Src homology 2 (SH2) domain in lymphocyte cell kinase (Lck)

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 332 KDKEGCFVVRNS-STKGLYTLSLYTKVPHPH--VKHYHIKQNSRGEFFLSEKHCCHSIPE 388
            +  G F++R S +T G ++LS+     +    VKHY I+    G F++S +     + E
Sbjct: 23  GNTHGSFLIRESETTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHE 82

Query: 389 VVNYHRHNSGGLASRL 404
           +V ++ + S GL +RL
Sbjct: 83  LVRHYTNASDGLCTRL 98

Lck is a member of the Src non-receptor type tyrosine kinase family of proteins. It is expressed in the brain, T-cells, and NK cells. The unique domain of Lck mediates its interaction with two T-cell surface molecules, CD4 and CD8. It associates with their cytoplasmic tails on CD4 T helper cells and CD8 cytotoxic T cells to assist signaling from the T cell receptor (TCR) complex. When the T cell receptor is engaged by the specific antigen presented by MHC, Lck phosphorylase the intracellular chains of the CD3 and zeta-chains of the TCR complex, allowing ZAP-70 to bind them. Lck then phosphorylates and activates ZAP-70, which in turn phosphorylates Linker of Activated T cells (LAT), a transmembrane protein that serves as a docking site for proteins including: Shc-Grb2-SOS, PI3K, and phospholipase C (PLC). The tyrosine phosphorylation cascade culminates in the intracellular mobilization of a calcium ions and activation of important signaling cascades within the lymphocyte, including the Ras-MEK-ERK pathway, which goes on to activate certain transcription factors such as NFAT, NF-kappaB, and AP-1. These transcription factors regulate the production cytokines such as Interleukin-2 that promote long-term proliferation and differentiation of the activated lymphocytes. The N-terminal tail of Lck is myristoylated and palmitoylated and it tethers the protein to the plasma membrane of the cell. Lck also contains a SH3 domain, a SH2 domain, and a C-terminal tyrosine kinase domain. Lck has 2 phosphorylation sites, the first an autophosphorylation site that is linked to activation of the protein and the second which is phosphorylated by Csk, which inhibits it. Lck is also inhibited by SHP-1 dephosphorylation and by Cbl ubiquitin ligase, which is part of the ubiquitin-mediated pathway. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
           M  GSLL++L+  E   G    L  L+D   Q+ +GMA++E+ NYIHR+ + +
Sbjct: 82  MAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAA 131

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 44.9 bits (107), Expect = 3e-05
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
              GSL + L+ +E  L  +   +L + +Q+ +G+ YL  +  IHR
Sbjct: 73  CEGGSLKDLLKENEGKL--SEDEILRILLQILEGLEYLHSNGIIHR 116

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 45.4 bits (108), Expect = 3e-05
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%)

Query: 1   MRHGSLLNYLRRHE---NTLGGNV-----GLLLDMCIQVCKGMAYLERHNYIHRE 47
           M +G L  +L++H    + L  N        LL M  Q+  GM YLE  N++HR+
Sbjct: 101 MENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRD 155

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 45.8 bits (108), Expect = 3e-05
 Identities = 17/47 (36%), Positives = 33/47 (70%), Gaps = 1/47 (2%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKP 254
           +++ SDVW+YG+L+WE+F+ G  PY G + ++   ++++ G  + KP
Sbjct: 316 YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKP 362

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 17/37 (45%), Positives = 28/37 (75%), Gaps = 1/37 (2%)

Query: 208 RFSSKSDVWAYGVLMWEVFT-CGKMPYGRLKNTEVVD 243
           +F++ SDVWA+GV +WE+FT C + PY  L + +V++
Sbjct: 207 KFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIE 243

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 12/92 (13%)

Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMK---EGTMSEDDFIEEA 473
           EI+ + +  +EELG  +FG V +G   G        ++ +  +K   EG + E+ F  EA
Sbjct: 1   EINLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREE-FKHEA 59

Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
            + +RLQH N+V L GV +K +P+ ++    S
Sbjct: 60  MMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCS 91

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 2/47 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M +G LL+Y+R +++ +G     LL+ C+Q+ KGM+YLE    +HR+
Sbjct: 90  MPYGCLLDYVRENKDRIGSQD--LLNWCVQIAKGMSYLEEVRLVHRD 134

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 14/101 (13%)

Query: 419 LSHD-KWEIDPAELMLLEELGSGQFGVV----------RRGKWRGSIDVAMMKEGTMSED 467
           L  D +WE    +L L + LG G FG V           + K   ++ V M+K+    +D
Sbjct: 4   LPEDPRWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKD 63

Query: 468 --DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
             D + E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 64  LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 104

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 45.8 bits (108), Expect = 3e-05
 Identities = 18/46 (39%), Positives = 31/46 (67%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+FT G  PY  +   E+   ++ G  ++KP
Sbjct: 219 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 264

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|212781 cd11847, SH3_Brk, Src homology 3 domain of Brk (Breast tumor kinase) Protein Tyrosine Kinase (PTK), also called PTK6

 Score = 41.4 bits (97), Expect = 3e-05
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 4/56 (7%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK-DKNGSV---GYIPSNYVKE 180
            AL+ FKA    +LS + G ++ + + + + W  +K D+ G V   G++P+NY+  
Sbjct: 3   KALWDFKARGDEELSFQAGDQFRIAERSGDWWTALKLDRAGGVVAQGFVPNNYLAR 58

Brk is a cytoplasmic (or non-receptor) PTK with limited homology to Src kinases. It has been found to be overexpressed in a majority of breast tumors. It plays roles in normal cell differentiation, proliferation, survival, migration, and cell cycle progression. Brk substrates include RNA-binding proteins (SLM-1/2, Sam68), transcription factors (STAT3/5), and signaling molecules (Akt, paxillin, IRS-4). Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). However, Brk lacks the N-terminal myristoylation site. The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212810 cd11877, SH3_PIX, Src Homology 3 domain of Pak Interactive eXchange factors

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           +V A + F+     +LS +KG    V    +  WW+    NG  G+ PSNYVKE
Sbjct: 1   LVRAKFNFEGTNEDELSFDKGDIITVTQVVEGGWWE-GTLNGKTGWFPSNYVKE 53

PIX proteins are Rho guanine nucleotide exchange factors (GEFs), which activate small GTPases by exchanging bound GDP for free GTP. They act as GEFs for both Cdc42 and Rac 1, and have been implicated in cell motility, adhesion, neurite outgrowth, and cell polarity. Vertebrates contain two proteins from the PIX subfamily, alpha-PIX and beta-PIX. Alpha-PIX, also called ARHGEF6, is localized in dendritic spines where it regulates spine morphogenesis. Mutations in the ARHGEF6 gene cause X-linked intellectual disability in humans. Beta-PIX play roles in regulating neuroendocrine exocytosis, focal adhesion maturation, cell migration, synaptic vesicle localization, and insulin secretion. PIX proteins contain an N-terminal SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains, and a C-terminal leucine-zipper domain for dimerization. The SH3 domain of PIX binds to an atypical PxxxPR motif in p21-activated kinases (PAKs) with high affinity. The binding of PAKs to PIX facilitate the localization of PAKs to focal complexes and also localizes PAKs to PIX targets Cdc43 and Rac, leading to the activation of PAKs. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 45.6 bits (108), Expect = 4e-05
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 11/93 (11%)

Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRR------GKWRGSIDVA--MMKEGTMSEDD--FI 470
           ++KWE     L   + LG+G FG V        GK    + VA  M+K    +++    +
Sbjct: 30  NEKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALM 89

Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
            E K+++ L QH+N+V L G C+   P+ ++T+
Sbjct: 90  SELKILSHLGQHKNIVNLLGACTHGGPVLVITE 122

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|198229 cd10366, SH2_Src_Yes, Src homology 2 (SH2) domain found in Yes

 Score = 42.3 bits (99), Expect = 4e-05
 Identities = 23/77 (29%), Positives = 48/77 (62%), Gaps = 3/77 (3%)

Query: 333 DKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV 389
           ++ G F+VR S +TKG Y+LS+  + +V   +VKHY I++   G ++++ +    ++ ++
Sbjct: 24  NQRGIFLVRESETTKGAYSLSIRDWDEVRGDNVKHYKIRKLDNGGYYITTRAQFDTLQKL 83

Query: 390 VNYHRHNSGGLASRLKT 406
           V ++  ++ GL  +L T
Sbjct: 84  VKHYTEHADGLCHKLTT 100

Yes is a member of the Src non-receptor type tyrosine kinase family of proteins. Yes is the cellular homolog of the Yamaguchi sarcoma virus oncogene. In humans it is encoded by the YES1 gene which maps to chromosome 18 and is in close proximity to thymidylate synthase. A corresponding Yes pseudogene has been found on chromosome 22. YES1 has been shown to interact with Janus kinase 2, CTNND1,RPL10, and Occludin. Yes1 has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|212700 cd11766, SH3_Nck_2, Second Src Homology 3 domain of Nck adaptor proteins

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             V  + ++A    +LSL KG    V++ + + WW+ +  NG VG+ PSNYV E
Sbjct: 1   PAVVKFNYEAQREDELSLRKGDRVLVLEKSSDGWWRGEC-NGQVGWFPSNYVTE 53

Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4), which show partly overlapping functions but also bind distinct targets. Their SH3 domains are involved in recruiting downstream effector molecules, such as the N-WASP/Arp2/3 complex, which when activated induces actin polymerization that results in the production of pedestals, or protrusions of the plasma membrane. The second SH3 domain of Nck appears to prefer ligands containing the APxxPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212746 cd11812, SH3_AHI-1, Src Homology 3 domain of Abelson helper integration site-1 (AHI-1)

 Score = 41.0 bits (96), Expect = 4e-05
 Identities = 19/51 (37%), Positives = 28/51 (54%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
           VVALY + A    +L++ +G    V+    ++WW     NG  GY P+NYV
Sbjct: 2   VVALYDYTANRSDELTIHRGDIIRVLYKDNDNWWFGSLVNGQQGYFPANYV 52

AHI-1, also called Jouberin, is expressed in high levels in the brain, gonad tissues, and skeletal muscle. It is an adaptor protein that interacts with the small GTPase Rab8a and regulates it distribution and function, affecting cilium formation and vesicle transport. Mutations in the AHI-1 gene can cause Joubert syndrome, a disorder characterized by brainstem malformations, cerebellar aplasia/hypoplasia, and retinal dystrophy. AHI-1 variation is also associated with susceptibility to schizophrenia and type 2 diabetes mellitus progression. AHI-1 contains WD40 and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 45.0 bits (106), Expect = 5e-05
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 9/80 (11%)

Query: 430 ELMLLEELGSGQFGVV--------RRGKWRGSIDVAMMKEGTMS-EDDFIEEAKVMTRLQ 480
           +++L  ELG G FG V           K +  + V  +K+ T++   DF  EA+++T LQ
Sbjct: 6   DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ 65

Query: 481 HQNLVQLYGVCSKHRPIYIV 500
           H+++V+ YGVC    P+ +V
Sbjct: 66  HEHIVKFYGVCGDGDPLIMV 85

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|198281 cd10418, SH2_Src_Fyn_isoform_a_like, Src homology 2 (SH2) domain found in Fyn isoform a like proteins

 Score = 41.9 bits (98), Expect = 5e-05
 Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 3/72 (4%)

Query: 336 GCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
           G F++R S +TKG Y+LS+  +  +   HVKHY I++   G ++++ +    ++ ++V +
Sbjct: 27  GTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQH 86

Query: 393 HRHNSGGLASRL 404
           +   + GL  RL
Sbjct: 87  YSERAAGLCCRL 98

Fyn is a member of the Src non-receptor type tyrosine kinase family of proteins. This cd contains the SH2 domain found in Fyn isoform a type proteins. Fyn is involved in the control of cell growth and is required in the following pathways: T and B cell receptor signaling, integrin-mediated signaling, growth factor and cytokine receptor signaling, platelet activation, ion channel function, cell adhesion, axon guidance, fertilization, entry into mitosis, and differentiation of natural killer cells, oligodendrocytes and keratinocytes. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and interacts with the Fyn-binding protein. Alternatively spliced transcript variants encoding distinct isoforms exist. Fyn is primarily localized to the cytoplasmic leaflet of the plasma membrane. Tyrosine phosphorylation of target proteins by Fyn serves to either regulate target protein activity, and/or to generate a binding site on the target protein that recruits other signaling molecules. FYN has been shown to interact with a number of proteins including: BCAR1, Cbl, Janus kinase, nephrin, Sky, tyrosine kinase, Wiskott-Aldrich syndrome protein, and Zap-70. Fyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|212881 cd11948, SH3_GRAP_N, N-terminal Src homology 3 domain of GRB2-related adaptor protein

 Score = 40.6 bits (95), Expect = 5e-05
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 4/53 (7%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEV--MDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           VALY F+A E  +L  +KG   ++  M+D Q +W+K  +  G  GYIP NY+K
Sbjct: 3   VALYSFQATESDELPFQKGDILKILNMEDDQ-NWYKA-ELQGREGYIPKNYIK 53

GRAP is a GRB-2 like adaptor protein that is highly expressed in lymphoid tissues. It acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. It has been identified as a regulator of TGFbeta signaling in diabetic kidney tubules and may have a role in the pathogenesis of the disease. GRAP contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The N-terminal SH3 domain of the related protein GRB2 binds to Sos and Sos-derived proline-rich peptides. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 44.6 bits (105), Expect = 6e-05
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
           +WE+    L+L + LG G FG V   +  G           + V M+K     +D  D I
Sbjct: 12  RWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLI 71

Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
            E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 72  SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 107

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|212717 cd11783, SH3_SH3RF_3, Third Src Homology 3 domain of SH3 domain containing ring finger 1 (SH3RF1), SH3RF3, and similar domains

 Score = 40.5 bits (95), Expect = 6e-05
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVK 179
           + VALYP+K  +  +L L KG  Y V +  Q+ W+K    + G  G  P NYV+
Sbjct: 1   IYVALYPYKPQKPDELELRKGEMYTVTEKCQDGWFKGTSLRTGQSGVFPGNYVQ 54

SH3RF1 (or POSH) and SH3RF3 (or POSH2) are scaffold proteins that function as E3 ubiquitin-protein ligases. They contain an N-terminal RING finger domain and four SH3 domains. This model represents the third SH3 domain, located in the middle of SH3RF1 and SH3RF3, and similar domains. SH3RF1 plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF3 interacts with p21-activated kinase 2 (PAK2) and GTP-loaded Rac1. It may play a role in regulating JNK mediated apoptosis in certain conditions. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212777 cd11843, SH3_PACSIN, Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons (PACSIN) proteins

 Score = 40.5 bits (95), Expect = 6e-05
 Identities = 17/51 (33%), Positives = 26/51 (50%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
           V ALY ++  E  +LS + G     +++  E  W     +G VG  P+NYV
Sbjct: 2   VRALYDYEGQESDELSFKAGDILTKLEEEDEQGWCKGRLDGRVGLYPANYV 52

PACSINs, also called Synaptic dynamin-associated proteins (Syndapins), act as regulators of cytoskeletal and membrane dynamics. They bind both dynamin and Wiskott-Aldrich syndrome protein (WASP), and may provide direct links between the actin cytoskeletal machinery through WASP and dynamin-dependent endocytosis. Vetebrates harbor three isoforms with distinct expression patterns and specific functions. PACSINs contain an N-terminal F-BAR domain and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|198233 cd10370, SH2_Src_Src42, Src homology 2 (SH2) domain found in the Src oncogene at 42A (Src42)

 Score = 41.7 bits (98), Expect = 6e-05
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 5/70 (7%)

Query: 255 KAWYVGDMSRQRAES-ILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQN 312
           + WY G + R  AE  +L  E++ G F++R+S S    Y+LS+        VKHY I+Q 
Sbjct: 3   EPWYFGKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRDG---DTVKHYRIRQL 59

Query: 313 SRGEFFLSEK 322
             G FF++ +
Sbjct: 60  DEGGFFIARR 69

Src42 is a member of the Src non-receptor type tyrosine kinase family of proteins. The integration of receptor tyrosine kinase-induced RAS and Src42 signals by Connector eNhancer of KSR (CNK) as a two-component input is essential for RAF activation in Drosophila. Src42 is present in a wide variety of organisms including: California sea hare, pea aphid, yellow fever mosquito, honey bee, Panamanian leafcutter ant, and sea urchin. Src42 has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its C-terminal tail. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 96

>gnl|CDD|212820 cd11887, SH3_Bbc1, Src Homology 3 domain of Bbc1 and similar domains

 Score = 40.4 bits (95), Expect = 6e-05
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNGSV--GYIPSNYVKE 180
           P  V ALYP+++    DL+ + G    V ++    W+  +  D NG+   G  P N+V+ 
Sbjct: 1   PFKVKALYPYESDHEDDLNFDVGQLITVTEEEDADWYFGEYVDSNGNTKEGIFPKNFVEV 60

This subfamily is composed of Saccharomyces cerevisiae Bbc1p, also called Mti1p (Myosin tail region-interacting protein), and similar proteins. Bbc1p interacts with and regulates type I myosins in yeast, Myo3p and Myo5p, which are involved in actin cytoskeletal reorganization. It also binds and inhibits Las17, a WASp family protein that functions as an activator of the Arp2/3 complex. Bbc1p contains an N-terminal SH3 domain. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 60

>gnl|CDD|198207 cd10344, SH2_SLAP, Src homology 2 domain found in Src-like adaptor proteins

 Score = 41.7 bits (98), Expect = 6e-05
 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 257 WYVGDMSRQRAESILKQED-KEGCFVVRNSST-KGLYTLSLYTKVPHPH--VKHYHIKQN 312
           W    +SR++AE +L     + G F++R S T +G Y+LS+  +       VKHY I + 
Sbjct: 12  WLFEGLSREKAEELLMLPGNQVGSFLIRESETRRGCYSLSVRHRGSQSRDSVKHYRIFRL 71

Query: 313 SRGEFFLS 320
             G F++S
Sbjct: 72  DNGWFYIS 79

SLAP belongs to the subfamily of adapter proteins that negatively regulate cellular signaling initiated by tyrosine kinases. It has a myristylated N-terminus, SH3 and SH2 domains with high homology to Src family tyrosine kinases, and a unique C-terminal tail, which is important for c-Cbl binding. SLAP negatively regulates platelet-derived growth factor (PDGF)-induced mitogenesis in fibroblasts and regulates F-actin assembly for dorsal ruffles formation. c-Cbl mediated SLAP inhibition towards actin remodeling. Moreover, SLAP enhanced PDGF-induced c-Cbl phosphorylation by SFK. In contrast, SLAP mitogenic inhibition was not mediated by c-Cbl, but it rather involved a competitive mechanism with SFK for PDGF-receptor (PDGFR) association and mitogenic signaling. Accordingly, phosphorylation of the Src mitogenic substrates Stat3 and Shc were reduced by SLAP. Thus, we concluded that SLAP regulates PDGFR signaling by two independent mechanisms: a competitive mechanism for PDGF-induced Src mitogenic signaling and a non-competitive mechanism for dorsal ruffles formation mediated by c-Cbl. SLAP is a hematopoietic adaptor containing Src homology (SH)3 and SH2 motifs and a unique carboxy terminus. Unlike c-Src, SLAP lacks a tyrosine kinase domain. Unlike c-Src, SLAP does not impact resorptive function of mature osteoclasts but induces their early apoptosis. SLAP negatively regulates differentiation of osteoclasts and proliferation of their precursors. Conversely, SLAP decreases osteoclast death by inhibiting activation of caspase 3. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|212699 cd11765, SH3_Nck_1, First Src Homology 3 domain of Nck adaptor proteins

 Score = 40.1 bits (94), Expect = 7e-05
 Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)

Query: 74  VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
            VVA Y + A    +LS++K  +  ++DD++ HWWKV++ + 
Sbjct: 1   YVVAKYDYTAQGDQELSIKKNEKLTLLDDSK-HWWKVQNSSN 41

Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4), which show partly overlapping functions but also bind distinct targets. Their SH3 domains are involved in recruiting downstream effector molecules, such as the N-WASP/Arp2/3 complex, which when activated induces actin polymerization that results in the production of pedestals, or protrusions of the plasma membrane. The first SH3 domain of Nck proteins preferentially binds the PxxDY sequence, which is present in the CD3e cytoplasmic tail. This binding inhibits phosphorylation by Src kinases, resulting in the downregulation of TCR surface expression. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 51

>gnl|CDD|212937 cd12004, SH3_Lyn, Src homology 3 domain of Lyn Protein Tyrosine Kinase

 Score = 40.4 bits (94), Expect = 7e-05
 Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 74  VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
           +VVALYP+  I   DLS +KG + +V+++  E WWK +
Sbjct: 1   IVVALYPYDGIHEDDLSFKKGEKLKVIEEHGE-WWKAR 37

Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212918 cd11985, SH3_Stac2_C, C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing protein 2 (Stac2)

 Score = 40.3 bits (94), Expect = 7e-05
 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 76  VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI 116
           VALY F   E  DL L+ G    V+DD+ E WWK K  D+ G 
Sbjct: 3   VALYKFLPQENNDLPLQPGDRVMVVDDSNEDWWKGKSGDRVGF 45

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac2 contains a single SH3 domain at the C-terminus unlike Stac1 and Stac3, which contain two C-terminal SH3 domains. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|198254 cd10391, SH2_SHE, Src homology 2 domain found in SH2 domain-containing adapter protein E (SHE)

 Score = 41.5 bits (97), Expect = 7e-05
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 6/79 (7%)

Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNS 313
           + WY G +SR  AES L Q  KE  ++VRNS S    Y+++L T     H+     K N 
Sbjct: 1   QPWYHGSISRAEAESRL-QPCKEASYLVRNSESGNSKYSIALKTSQGCVHIIVAQTKDN- 58

Query: 314 RGEFFLSEKHCC-HSIPEV 331
             ++ L++      SIPEV
Sbjct: 59  --KYTLNQTSAVFDSIPEV 75

SHE is expressed in heart, lung, brain, and skeletal muscle. SHE contains two pTry protein binding domains, protein interaction domain (PID) and a SH2 domain, followed by a glycine-proline rich region, all of which are N-terminal to the phosphotyrosine binding (PTB) domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|212879 cd11946, SH3_GRB2_N, N-terminal Src homology 3 domain of Growth factor receptor-bound protein 2

 Score = 40.0 bits (93), Expect = 8e-05
 Identities = 18/53 (33%), Positives = 31/53 (58%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
           +A Y FKA    +LS ++G   +V+++  +  W   + NG  G+IP NY++ K
Sbjct: 4   IAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMK 56

GRB2 is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. It is ubiquitously expressed in all tissues throughout development and is important in cell cycle progression, motility, morphogenesis, and angiogenesis. In lymphocytes, GRB2 is associated with antigen receptor signaling components. GRB2 contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. Its N-terminal SH3 domain binds to Sos and Sos-derived proline-rich peptides. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|198178 cd09923, SH2_SOCS_family, Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) family

 Score = 40.6 bits (96), Expect = 9e-05
 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKG-LYTLSLYT 297
           WY G ++R  AE +L  +  EG F+VR+SS    L+++S  T
Sbjct: 2   WYWGGITRYEAEELLAGK-PEGTFLVRDSSDSRYLFSVSFRT 42

SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 81

>gnl|CDD|212792 cd11858, SH3_Myosin-I_fungi, Src homology 3 domain of Type I fungal Myosins

 Score = 40.1 bits (94), Expect = 9e-05
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSV-GYIPSNYVKE 180
           ALY F      +LSL+K     ++      WW  K  + S  G++P+ Y++E
Sbjct: 4   ALYDFAGSVANELSLKKDDIVYIVQKEDNGWWLAKKLDESKEGWVPAAYLEE 55

Type I myosins (myosin-I) are actin-dependent motors in endocytic actin structures and actin patches. They play roles in membrane traffic in endocytic and secretory pathways, cell motility, and mechanosensing. Saccharomyces cerevisiae has two myosins-I, Myo3 and Myo5, which are involved in endocytosis and the polarization of the actin cytoskeleton. Myosin-I contains an N-terminal actin-activated ATPase, a phospholipid-binding TH1 (tail homology 1) domain, and a C-terminal extension which includes an F-actin-binding TH2 domain, an SH3 domain, and an acidic peptide that participates in activating the Arp2/3complex. The SH3 domain of myosin-I is required for myosin-I-induced actin polymerization. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 44.2 bits (104), Expect = 9e-05
 Identities = 23/86 (26%), Positives = 49/86 (56%), Gaps = 10/86 (11%)

Query: 431 LMLLEELGSGQFGVVRRG---KWRG-----SIDVAMMKEGTMSED--DFIEEAKVMTRLQ 480
           L+L + LG G+FG V +    + +G     ++ V M+KE   S +  D + E  ++ ++ 
Sbjct: 2   LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVN 61

Query: 481 HQNLVQLYGVCSKHRPIYIVTDTSSF 506
           H ++++LYG CS+  P+ ++ + + +
Sbjct: 62  HPHVIKLYGACSQDGPLLLIVEYAKY 87

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
           M  GSLL++L+         +  L+DM  Q+  GMAY+ER NY+HR+ + +
Sbjct: 82  MSKGSLLDFLKGEMGKYL-RLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 131

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 43.5 bits (102), Expect = 1e-04
 Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 5/53 (9%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRETKKS 51
           M  GSLL++L+  +   G  + L  L+DM  Q+  GMAY+ER NYIHR+ + +
Sbjct: 82  MGKGSLLDFLKEGD---GKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAA 131

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)

Query: 4   GSLLNYLRRHENTLGG-NVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           GSLL+ LR+    LG   +  L D  +Q+  GM YLE   +IHR+
Sbjct: 80  GSLLDRLRKDA--LGHFLISTLCDYAVQIANGMRYLESKRFIHRD 122

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|212896 cd11963, SH3_STAM2, Src homology 3 domain of Signal Transducing Adaptor Molecule 2

 Score = 39.6 bits (92), Expect = 1e-04
 Identities = 16/42 (38%), Positives = 27/42 (64%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGI 116
           V ALY F+A+E  +L+ + G    V+DD+  +WWK ++  G+
Sbjct: 4   VRALYDFEAVEDNELTFKHGEIIIVLDDSDANWWKGENHRGV 45

STAM2, also called EAST (Epidermal growth factor receptor-associated protein with SH3 and TAM domain) or Hbp (Hrs binding protein), is part of the endosomal sorting complex required for transport (ESCRT-0). It plays a role in sorting mono-ubiquinated endosomal cargo for trafficking to the lysosome for degradation. It is also involved in the regulation of exocytosis. STAMs were discovered as proteins that are highly phosphorylated following cytokine and growth factor stimulation. They function in cytokine signaling and surface receptor degradation, as well as regulate Golgi morphology. They associate with many proteins including Jak2 and Jak3 tyrosine kinases, Hrs, AMSH, and UBPY. STAM adaptor proteins contain VHS (Vps27, Hrs, STAM homology), ubiquitin interacting (UIM), and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|198226 cd10363, SH2_Src_HCK, Src homology 2 (SH2) domain found in HCK

 Score = 40.7 bits (95), Expect = 1e-04
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 257 WYVGDMSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPH--PHVKHYHIKQN 312
           W+   +SR+ AE  +L   +  G F++R+S +TKG Y+LS+    P     VKHY I+  
Sbjct: 5   WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPQHGDTVKHYKIRTL 64

Query: 313 SRGEFFLSEKHCCHSIPEV 331
             G F++S +    ++ E+
Sbjct: 65  DNGGFYISPRSTFSTLQEL 83

HCK is a member of the Src non-receptor type tyrosine kinase family of proteins and is expressed in hemopoietic cells. HCK is proposed to couple the Fc receptor to the activation of the respiratory burst. It may also play a role in neutrophil migration and in the degranulation of neutrophils. It has two different translational starts that have different subcellular localization. HCK has been shown to interact with BCR gene, ELMO1 Cbl gene, RAS p21 protein activator 1, RASA3, Granulocyte colony-stimulating factor receptor, ADAM15 and RAPGEF1. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its C-terminal tail. In general SH2 domains are involved in signal transduction. HCK has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 44.2 bits (104), Expect = 1e-04
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 12/70 (17%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP------------KA 256
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P            K 
Sbjct: 188 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 247

Query: 257 WYVGDMSRQR 266
           W +   SR +
Sbjct: 248 WMIDADSRPK 257

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 43.8 bits (103), Expect = 1e-04
 Identities = 16/47 (34%), Positives = 32/47 (68%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           ++++SDVW++GVL+WE+ T G  PY  +    + + ++ G  +E+P+
Sbjct: 206 YTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPE 252

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 43.7 bits (103), Expect = 1e-04
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 5/95 (5%)

Query: 166 KNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELI---HQVLNYTRFSSKSDVWAYGVLM 222
           K G  G  PS Y ++       K   +  L  EL+   H  L     +  S+VWA GV +
Sbjct: 139 KVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTL 198

Query: 223 WEVFTCGKMPYGRLKNTEVVDRV--QRGIILEKPK 255
           WE+F     PY  L + EV++ V   + + L KP+
Sbjct: 199 WELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQ 233

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|212835 cd11902, SH3_Nck2_2, Second Src Homology 3 domain of Nck2 adaptor protein

 Score = 39.6 bits (92), Expect = 1e-04
 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 141 DLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
           +LSL KG+   VM+   + WW+    NG +G+ PSNYV E+
Sbjct: 16  ELSLVKGSRVTVMEKCSDGWWR-GSYNGQIGWFPSNYVVEE 55

Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds neuronal signaling proteins such as ephrinB and Disabled-1 (Dab-1) exclusively. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The second SH3 domain of Nck appears to prefer ligands containing the APxxPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212709 cd11775, SH3_Sla1p_3, Third Src Homology 3 domain of the fungal endocytic adaptor protein Sla1p

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 4/57 (7%)

Query: 126 KVVVALYPFKAIEGGD-LSLEKGAEYEVMDDTQEH-WWKVKD-KNGSVGYIPSNYVK 179
           K    LY F A +  D L++++G    ++DD +   WW V++   G  G +P++Y++
Sbjct: 1   KRGKVLYDFDA-QSDDELTVKEGDVVYILDDKKSKDWWMVENVSTGKEGVVPASYIE 56

Sla1p facilitates endocytosis by playing a role as an adaptor protein in coupling components of the actin cytoskeleton to the endocytic machinery. It interacts with Abp1p, Las17p and Pan1p, which are activator proteins of actin-related protein 2/3 (Arp2/3). Sla1p contains multiple domains including three SH3 domains, a SAM (sterile alpha motif) domain, and a Sla1 homology domain 1 (SHD1), which binds to the NPFXD motif that is found in many integral membrane proteins such as the Golgi-localized Arf-binding protein Lsb5p and the P4-ATPases, Drs2p and Dnf1p. The third SH3 domain of Sla1p can bind ubiquitin while retaining the ability to bind proline-rich ligands; monoubiquitination of target proteins signals internalization and sorting through the endocytic pathway. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212742 cd11808, SH3_Alpha_Spectrin, Src homology 3 domain of Alpha Spectrin

 Score = 39.8 bits (93), Expect = 1e-04
 Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
            VVALY ++     ++S++KG    +++ + + WWKV + N   G++P+ YVK
Sbjct: 1   CVVALYDYQEKSPREVSMKKGDILTLLNSSNKDWWKV-EVNDRQGFVPAAYVK 52

Spectrin is a major structural component of the red blood cell membrane skeleton and is important in erythropoiesis and membrane biogenesis. It is a flexible, rope-like molecule composed of two subunits, alpha and beta, which consist of many spectrin-type repeats. Alpha and beta spectrin associate to form heterodimers and tetramers; spectrin tetramer formation is critical for red cell shape and deformability. Defects in alpha spectrin have been associated with inherited hemolytic anemias including hereditary spherocytosis (HSp), hereditary elliptocytosis (HE), and hereditary pyropoikilocytosis (HPP). Alpha spectrin contains a middle SH3 domain and a C-terminal EF-hand binding motif in addition to multiple spectrin repeats. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212821 cd11888, SH3_ARHGAP9_like, Src Homology 3 domain of Rho GTPase-activating protein 9 and similar proteins

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)

Query: 127 VVVALYPF--KAIEGGDLSLEKGAEYEVMDDTQEHWWKVK-DKNGSVGYIPSNY 177
            VV LYPF     +G  +S+++G  + ++  + + WW+V+   +    Y+P+ Y
Sbjct: 1   YVVVLYPFEYTGKDGRKVSIKEGERFLLLKKSNDDWWQVRRPGDSKPFYVPAQY 54

This subfamily is composed of Rho GTPase-activating proteins including mammalian ARHGAP9, and vertebrate ARHGAPs 12 and 27. RhoGAPs (or ARHGAPs) bind to Rho proteins and enhance the hydrolysis rates of bound GTP. ARHGAP9 functions as a GAP for Rac and Cdc42, but not for RhoA. It negatively regulates cell migration and adhesion. It also acts as a docking protein for the MAP kinases Erk2 and p38alpha, and may facilitate cross-talk between the Rho GTPase and MAPK pathways to control actin remodeling. ARHGAP27, also called CAMGAP1, shows GAP activity towards Rac1 and Cdc42. It binds the adaptor protein CIN85 and may play a role in clathrin-mediated endocytosis. ARHGAP12 has been shown to display GAP activity towards Rac1. It plays a role in regulating HFG-driven cell growth and invasiveness. ARHGAPs in this subfamily contain SH3, WW, Pleckstin homology (PH), and RhoGAP domains. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 54

>gnl|CDD|212711 cd11777, SH3_CIP4_Bzz1_like, Src Homology 3 domain of Cdc42-Interacting Protein 4, Bzz1 and similar domains

 Score = 39.5 bits (92), Expect = 1e-04
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVM-DDTQEHWWKVKDKNGSVGYIPSNYVK 179
            ALY F     G +S+ +G +  ++ +D  + W +V+   G  GY+P++Y++
Sbjct: 3   KALYAFVGSSEGTISMTEGEKLSLVEEDKGDGWTRVRRDTGEEGYVPTSYIR 54

This subfamily is composed of Cdc42-Interacting Protein 4 (CIP4) and similar proteins such as Formin Binding Protein 17 (FBP17) and FormiN Binding Protein 1-Like (FNBP1L), as well as yeast Bzz1 (or Bzz1p). CIP4 and FNBP1L are Cdc42 effectors that bind Wiskott-Aldrich syndrome protein (WASP) and function in endocytosis. CIP4 and FBP17 bind to the Fas ligand and may be implicated in the inflammatory response. CIP4 may also play a role in phagocytosis. Bzz1 is also a WASP/Las17-interacting protein involved in endocytosis and trafficking to the vacuole. It physically interacts with type I myosins and functions in the early steps of endocytosis. Members of this subfamily contain an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain as well as at least one C-terminal SH3 domain. Bzz1 contains a second SH3 domain at the C-terminus. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|198227 cd10364, SH2_Src_Lyn, Src homology 2 (SH2) domain found in Lyn

 Score = 40.7 bits (95), Expect = 1e-04
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 4/70 (5%)

Query: 257 WYVGDMSRQRAE-SILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPH--VKHYHIKQN 312
           W+  D++R+ AE  +L   +  G F++R S T KG Y+LS+    P     +KHY I+  
Sbjct: 5   WFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSYSLSVRDYDPQHGDVIKHYKIRSL 64

Query: 313 SRGEFFLSEK 322
             G +++S +
Sbjct: 65  DNGGYYISPR 74

Lyn is a member of the Src non-receptor type tyrosine kinase family of proteins and is expressed in the hematopoietic cells, in neural tissues, liver, and adipose tissue. There are two alternatively spliced forms of Lyn. Lyn plays an inhibitory role in myeloid lineage proliferation. Following engagement of the B cell receptors, Lyn undergoes rapid phosphorylation and activation, triggering a cascade of signaling events mediated by Lyn phosphorylation of tyrosine residues within the immunoreceptor tyrosine-based activation motifs (ITAM) of the receptor proteins, and subsequent recruitment and activation of other kinases including Syk, phospholipase C2 (PLC2) and phosphatidyl inositol-3 kinase. These kinases play critical roles in proliferation, Ca2+ mobilization and cell differentiation. Lyn plays an essential role in the transmission of inhibitory signals through phosphorylation of tyrosine residues within the immunoreceptor tyrosine-based inhibitory motifs (ITIM) in regulatory proteins such as CD22, PIR-B and FC RIIb1. Their ITIM phosphorylation subsequently leads to recruitment and activation of phosphatases such as SHIP-1 and SHP-1 which further down modulate signaling pathways, attenuate cell activation and can mediate tolerance. Lyn also plays a role in the insulin signaling pathway. Activated Lyn phosphorylates insulin receptor substrate 1 (IRS1) leading to an increase in translocation of Glut-4 to the cell membrane and increased glucose utilization. It is the primary Src family member involved in signaling downstream of the B cell receptor. Lyn plays an unusual, 2-fold role in B cell receptor signaling; it is essential for initiation of signaling but is also later involved in negative regulation of the signal. Lyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|212925 cd11992, SH3_Intersectin2_3, Third Src homology 3 domain (or SH3C) of Intersectin-2

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 6/53 (11%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNGSVGYIPSNYVK 179
           +ALYP+ + E GDL+  +G E  V     E WW   ++D+    G  PSNYV+
Sbjct: 3   IALYPYSSSEPGDLTFNEGEEILVTQKDGE-WWTGSIEDRT---GIFPSNYVR 51

Intersectin-2 (ITSN2) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN2 also functions as a specific GEF for Cdc42 activation in epithelial morphogenesis, and is required in mitotic spindle orientation. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The third SH3 domain (SH3C) of ITSN2 has been shown to bind the K15 protein of Kaposi's sarcoma-associated herpesvirus. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212834 cd11901, SH3_Nck1_2, Second Src Homology 3 domain of Nck1 adaptor protein

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 141 DLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           +LSL KG +  VM+   + WW+    NG VG+ PSNYV E
Sbjct: 17  ELSLVKGTKVIVMEKCSDGWWR-GSYNGQVGWFPSNYVTE 55

Nck1 (also called Nckalpha) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds and activates RasGAP, resulting in the downregulation of Ras. It is also involved in the signaling of endothilin-mediated inhibition of cell migration. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The second SH3 domain of Nck appears to prefer ligands containing the APxxPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212783 cd11849, SH3_SPIN90, Src homology 3 domain of SH3 protein interacting with Nck, 90 kDa (SPIN90)

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 14/39 (35%), Positives = 23/39 (58%)

Query: 77  ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           ALY FK+ E   LS  +G  + +++ +  HWW V + +G
Sbjct: 4   ALYDFKSAEPNTLSFSEGETFLLLERSNAHWWLVTNHSG 42

SPIN90 is also called NCK interacting protein with SH3 domain (NCKIPSD), Dia-interacting protein (DIP), 54 kDa vimentin-interacting protein (VIP54), or WASP-interacting SH3-domain protein (WISH). It is an F-actin binding protein that regulates actin polymerization and endocytosis. It associates with the Arp2/3 complex near actin filaments and determines filament localization at the leading edge of lamellipodia. SPIN90 is expressed in the early stages of neuronal differentiation and plays a role in regulating growth cone dynamics and neurite outgrowth. It also interacts with IRSp53 and regulates cell motility by playing a role in the formation of membrane protrusions. SPIN90 contains an N-terminal SH3 domain, a proline-rich domain, and a C-terminal VCA (verprolin-homology and cofilin-like acidic) domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 10/83 (12%)

Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEG--TMSEDDFIEEAK 474
           E     +  + ++G G FG V + +  G         + V M+KE      + DF  EA 
Sbjct: 1   EYPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 60

Query: 475 VMTRLQHQNLVQLYGVCSKHRPI 497
           +M    H N+V+L GVC+  +P+
Sbjct: 61  LMAEFDHPNIVKLLGVCAVGKPM 83

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE--TKKSLYPSSL 57
           M +G+L ++LR+HE  L    G L+ M   +  GM YL    Y+H+     K L  S L
Sbjct: 88  MSNGALDSFLRKHEGQL--VAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDL 144

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|212776 cd11842, SH3_Ysc84p_like, Src homology 3 domain of Ysc84p and similar fungal proteins

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWW--KVKDKNGI 116
            VALY F   + GDL+ +KG    ++   D+Q  WW  ++  + GI
Sbjct: 2   AVALYDFAGEQPGDLAFQKGDIITILKKSDSQNDWWTGRIGGREGI 47

This family is composed of the Saccharomyces cerevisiae proteins, Ysc84p (also called LAS17-binding protein 4, Lsb4p) and Lsb3p, and similar fungal proteins. They contain an N-terminal SYLF domain (also called DUF500) and a C-terminal SH3 domain. Ysc84p localizes to actin patches and plays an important in actin polymerization during endocytosis. The N-terminal domain of both Ysc84p and Lsb3p can bind and bundle actin filaments. A study of the yeast SH3 domain interactome predicts that the SH3 domains of Lsb3p and Lsb4p may function as molecular hubs for the assembly of endocytic complexes. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212758 cd11824, SH3_PSTPIP1, Src homology 3 domain of Proline-Serine-Threonine Phosphatase-Interacting Protein 1

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 76  VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
             LY + A E  +LS+ KG    V++  ++ WW V ++NG +
Sbjct: 3   SVLYDYTAQEDDELSISKGDVVAVIEKGEDGWWTV-ERNGQK 43

PSTPIP1, also called CD2 Binding Protein 1 (CD2BP1), is mainly expressed in hematopoietic cells. It is a binding partner of the cell surface receptor CD2 and PTP-PEST, a tyrosine phosphatase which functions in cell motility and Rac1 regulation. It also plays a role in the activation of the Wiskott-Aldrich syndrome protein (WASP), which couples actin rearrangement and T cell activation. Mutations in the gene encoding PSTPIP1 cause the autoinflammatory disorder known as PAPA (pyogenic sterile arthritis, pyoderma gangrenosum, and acne) syndrome. PSTPIP1 contains an N-terminal F-BAR domain, PEST motifs, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|198189 cd09935, SH2_ABL, Src homology 2 (SH2) domain found in Abelson murine lymphosarcoma virus (ABL) proteins

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           WY G +SR  AE +L      G F+VR S S+ G Y++SL        V HY I ++S G
Sbjct: 5   WYHGPISRNAAEYLLSS-GINGSFLVRESESSPGQYSISLRY---DGRVYHYRISEDSDG 60

Query: 316 EFFLSEKH 323
           + +++++H
Sbjct: 61  KVYVTQEH 68

ABL-family proteins are highly conserved tyrosine kinases. Each ABL protein contains an SH3-SH2-TK (Src homology 3-Src homology 2-tyrosine kinase) domain cassette, which confers autoregulated kinase activity and is common among nonreceptor tyrosine kinases. Several types of posttranslational modifications control ABL catalytic activity, subcellular localization, and stability, with consequences for both cytoplasmic and nuclear ABL functions. Binding partners provide additional regulation of ABL catalytic activity, substrate specificity, and downstream signaling. By combining this cassette with actin-binding and -bundling domain, ABL proteins are capable of connecting phosphoregulation with actin-filament reorganization. Vertebrate paralogs, ABL1 and ABL2, have evolved to perform specialized functions. ABL1 includes nuclear localization signals and a DNA binding domain which is used to mediate DNA damage-repair functions, while ABL2 has additional binding capacity for actin and for microtubules to enhance its cytoskeletal remodeling functions. SH2 is involved in several autoinhibitory mechanism that constrain the enzymatic activity of the ABL-family kinases. In one mechanism SH2 and SH3 cradle the kinase domain while a cap sequence stabilizes the inactive conformation resulting in a locked inactive state. Another involves phosphatidylinositol 4,5-bisphosphate (PIP2) which binds the SH2 domain through residues normally required for phosphotyrosine binding in the linker segment between the SH2 and kinase domains. The SH2 domain contributes to ABL catalytic activity and target site specificity. It is thought that the ABL catalytic site and SH2 pocket have coevolved to recognize the same sequences. Recent work now supports a hierarchical processivity model in which the substrate target site most compatible with ABL kinase domain preferences is phosphorylated with greatest efficiency. If this site is compatible with the ABL SH2 domain specificity, it will then reposition and dock in the SH2 pocket. This mechanism also explains how ABL kinases phosphorylates poor targets on the same substrate if they are properly positioned and how relatively poor substrate proteins might be recruited to ABL through a complex with strong substrates that can also dock with the SH2 pocket. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 94

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 12/90 (13%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWR----GSIDVAMMKEGTMSED-------DFIEE 472
           WE+   ++ LL ELG G FG+V  G  R    G  +  +  + T++E        +F+ E
Sbjct: 1   WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVK-TVNESASLRERIEFLNE 59

Query: 473 AKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           A VM      ++V+L GV SK +P  +V +
Sbjct: 60  ASVMKGFTCHHVVRLLGVVSKGQPTLVVME 89

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|198181 cd09927, SH2_Tensin_like, Src homology 2 domain found in Tensin-like proteins

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 5/71 (7%)

Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNS 313
           K WY  ++SR +A ++LK +   G F+VR+S+T KG Y L++    P P V  +  K + 
Sbjct: 3   KYWYKPNISRDQAIALLKDK-PPGTFLVRDSTTYKGAYGLAVKVATPPPGVNPFEAKGDP 61

Query: 314 RGEF---FLSE 321
             E    FL E
Sbjct: 62  ESELVRHFLIE 72

SH2 domain found in Tensin-like proteins. The Tensins are a family of intracellular proteins that interact with receptor tyrosine kinases (RTKs), integrins, and actin. They are thought act as signaling bridges between the extracellular space and the cytoskeleton. There are four homologues: Tensin1, Tensin2 (TENC1, C1-TEN), Tensin3 and Tensin4 (cten), all of which contain a C-terminal tandem SH2-PTB domain pairing, as well as actin-binding regions that may localize them to focal adhesions. The isoforms of Tensin2 and Tensin3 contain N-terminal C1 domains, which are atypical and not expected to bind to phorbol esters. Tensins 1-3 contain a phosphatase (PTPase) and C2 domain pairing which resembles PTEN (phosphatase and tensin homologue deleted on chromosome 10) protein. PTEN is a lipid phosphatase that dephosphorylates phosphatidylinositol 3,4,5-trisphosphate (PtdIns(3,4,5)P3) to yield phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2). As PtdIns(3,4,5)P3 is the product of phosphatidylinositol 3-kinase (PI3K) activity, PTEN is therefore a key negative regulator of the PI3K pathway. Because of their PTEN-like domains, the Tensins may also possess phosphoinositide-binding or phosphatase capabilities. However, only Tensin2 and Tensin3 have the potential to be phosphatases since only their PTPase domains contain a cysteine residue that is essential for catalytic activity. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 116

>gnl|CDD|212753 cd11819, SH3_Cortactin_like, Src homology 3 domain of Cortactin and related proteins

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 16/51 (31%), Positives = 26/51 (50%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
            ALY ++A E  ++S  +G     ++   E WW   +  G  G  P+NYV+
Sbjct: 3   KALYDYQAAEDNEISFVEGDIITQIEQIDEGWWLGVNAKGQKGLFPANYVE 53

This subfamily includes cortactin, Abp1 (actin-binding protein 1), hematopoietic lineage cell-specific protein 1 (HS1), and similar proteins. These proteins are involved in regulating actin dynamics through direct or indirect interaction with the Arp2/3 complex, which is required to initiate actin polymerization. They all contain at least one C-terminal SH3 domain. Cortactin and HS1 bind Arp2/3 and actin through an N-terminal region that contains an acidic domain and several copies of a repeat domain found in cortactin and HS1. Abp1 binds actin via an N-terminal actin-depolymerizing factor (ADF) homology domain. Yeast Abp1 binds Arp2/3 directly through two acidic domains. Mammalian Abp1 does not directly interact with Arp2/3; instead, it regulates actin dynamics indirectly by interacting with dynamin and WASP family proteins. The C-terminal region of these proteins acts as an adaptor or scaffold that can connect membrane trafficking and signaling proteins that bind the SH3 domain within the actin network. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212957 cd12024, SH3_NoxO1_2, Second or C-terminal Src homology 3 domain of NADPH oxidase (Nox) Organizing protein 1

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
            A   ++A +  +LS+  G   EV+  +   WW ++  NG  GY+PS Y++
Sbjct: 3   YATRAYEAQKEDELSVPAGVVVEVLQKSDNGWWLIR-YNGRAGYVPSMYLQ 52

Nox Organizing protein 1 (NoxO1) is a critical regulator of enzyme kinetics of the nonphagocytic NADPH oxidase Nox1, which catalyzes the transfer of electrons from NADPH to molecular oxygen to form superoxide. Nox1 is expressed in colon, stomach, uterus, prostate, and vascular smooth muscle cells. NoxO1 is involved in targeting activator subunits (such as NoxA1) to Nox1. It is co-localized with Nox1 in the membranes of resting cells and directs the subcellular localization of Nox1. NoxO1 contains an N-terminal Phox homology (PX) domain, tandem SH3 domains (N-SH3 and C-SH3), and a C-terminal proline-rich region (PRR). This model characterizes the second SH3 domain (or C-SH3) of NoxO1. The tandem SH3 domains of NoxO1 interact with the PRR of p22phox, which also complexes with Nox1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212884 cd11951, SH3_GRAP_C, C-terminal Src homology 3 domain of GRB2-related adaptor protein

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
           V A Y F A +   LS  +G   EV+D    +WW+ +  +G VG+ P NYV
Sbjct: 2   VQAQYDFSAEDPSQLSFRRGDIIEVLDCPDPNWWRGR-ISGRVGFFPRNYV 51

GRAP is a GRB-2 like adaptor protein that is highly expressed in lymphoid tissues. It acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. It has been identified as a regulator of TGFbeta signaling in diabetic kidney tubules and may have a role in the pathogenesis of the disease. GRAP contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domains (SH3c) of the related proteins, GRB2 and GRAP2, have been shown to bind to classical PxxP motif ligands, as well as to non-classical motifs. GRB2 SH3c binds Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, while the SH3c of GRAP2 binds to the phosphatase-like protein HD-PTP via a RxxxxK motif. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 4   GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           GSL  YL R++N +  N+   L   +Q+CKGM YL    Y+HR+
Sbjct: 93  GSLKEYLPRNKNKI--NLKQQLKYAVQICKGMDYLGSRQYVHRD 134

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|212806 cd11873, SH3_CD2AP-like_1, First Src Homology 3 domain (SH3A) of CD2-associated protein and similar proteins

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V+  + + A E  +L+L+ G     +   +E WW+    NG  G  P N+VK 
Sbjct: 2   VIVEFDYDAEEPDELTLKVGDIITNVKKMEEGWWE-GTLNGKRGMFPDNFVKV 53

This subfamily is composed of the first SH3 domain (SH3A) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3A of both proteins bind to an atypical PXXXPR motif at the C-terminus of Cbl and the cytoplasmic domain of the cell adhesion protein CD2. CIN85 SH3A binds to internal proline-rich motifs within the proline-rich region; this intramolecular interaction serves as a regulatory mechanism to keep CIN85 in a closed conformation, preventing the recruitment of other proteins. CIN85 SH3A has also been shown to bind ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|198230 cd10367, SH2_Src_Fgr, Src homology 2 (SH2) domain found in Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog, Fgr

 Score = 39.5 bits (92), Expect = 3e-04
 Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 4/77 (5%)

Query: 335 EGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN 391
            G F++R S +TKG Y+LS+  + +    HVKHY I++   G ++++ +    ++ E+V 
Sbjct: 26  RGAFLIRESETTKGAYSLSIRDWDQNRGDHVKHYKIRKLDTGGYYITTRAQFDTVQELVQ 85

Query: 392 YHRHNSGGLASRLKTSP 408
           ++   + GL   L T+P
Sbjct: 86  HYMEVNDGLCYLL-TAP 101

Fgr is a member of the Src non-receptor type tyrosine kinase family of proteins. The protein contains N-terminal sites for myristoylation and palmitoylation, a PTK domain, and SH2 and SH3 domains which are involved in mediating protein-protein interactions with phosphotyrosine-containing and proline-rich motifs, respectively. Fgr is expressed in B-cells and myeloid cells, localizes to plasma membrane ruffles, and functions as a negative regulator of cell migration and adhesion triggered by the beta-2 integrin signal transduction pathway. Multiple alternatively spliced variants, encoding the same protein, have been identified Fgr has been shown to interact with Wiskott-Aldrich syndrome protein. Fgr has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|212897 cd11964, SH3_STAM1, Src homology 3 domain of Signal Transducing Adaptor Molecule 1

 Score = 38.4 bits (89), Expect = 3e-04
 Identities = 14/44 (31%), Positives = 25/44 (56%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGI 116
           + V A+Y F+A E  +L+ + G    ++DD+  +WWK +   G 
Sbjct: 1   RKVRAIYDFEAAEDNELTFKAGDIITILDDSDPNWWKGETPQGT 44

STAM1 is part of the endosomal sorting complex required for transport (ESCRT-0) and is involved in sorting ubiquitinated cargo proteins from the endosome. It may also be involved in the regulation of IL2 and GM-CSF mediated signaling, and has been implicated in neural cell survival. STAMs were discovered as proteins that are highly phosphorylated following cytokine and growth factor stimulation. They function in cytokine signaling and surface receptor degradation, as well as regulate Golgi morphology. They associate with many proteins including Jak2 and Jak3 tyrosine kinases, Hrs, AMSH, and UBPY. STAM adaptor proteins contain VHS (Vps27, Hrs, STAM homology), ubiquitin interacting (UIM), and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|198231 cd10368, SH2_Src_Fyn, Src homology 2 (SH2) domain found in Fyn

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 3/72 (4%)

Query: 336 GCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
           G F++R S +TKG Y+LS+  +  +   HVKHY I++   G ++++ +    ++ ++V +
Sbjct: 27  GTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQH 86

Query: 393 HRHNSGGLASRL 404
           +   + GL   L
Sbjct: 87  YSETANGLCKVL 98

Fyn is a member of the Src non-receptor type tyrosine kinase family of proteins. Fyn is involved in the control of cell growth and is required in the following pathways: T and B cell receptor signaling, integrin-mediated signaling, growth factor and cytokine receptor signaling, platelet activation, ion channel function, cell adhesion, axon guidance, fertilization, entry into mitosis, and differentiation of natural killer cells, oligodendrocytes and keratinocytes. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and interacts with the Fyn-binding protein. Alternatively spliced transcript variants encoding distinct isoforms exist. Fyn is primarily localized to the cytoplasmic leaflet of the plasma membrane. Tyrosine phosphorylation of target proteins by Fyn serves to either regulate target protein activity, and/or to generate a binding site on the target protein that recruits other signaling molecules. FYN has been shown to interact with a number of proteins including: BCAR1, Cbl, Janus kinase, nephrin, Sky, tyrosine kinase, Wiskott-Aldrich syndrome protein, and Zap-70. Fyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198223 cd10360, SH2_Srm, Src homology 2 (SH2) domain found in Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristoylation sites (srm)

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)

Query: 257 WYVGDMSRQRAES-ILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           WY   +SR +A+  +L   ++ G F++R S S+ G Y+LS+        V HY I     
Sbjct: 2   WYFSGISRTQAQQLLLSPPNEPGAFLIRPSESSLGGYSLSVRA---QAKVCHYRICMAPS 58

Query: 315 GEFFLSEKH 323
           G  +L +  
Sbjct: 59  GSLYLQKGR 67

Srm is a nonreceptor protein kinase that has two SH2 domains, a SH3 domain, and a kinase domain with a tyrosine residue for autophosphorylation. However it lacks an N-terminal glycine for myristoylation and a C-terminal tyrosine which suppresses kinase activity when phosphorylated. Srm is most similar to members of the Tec family who other members include: Tec, Btk/Emb, and Itk/Tsk/Emt. However Srm differs in its N-terminal unique domain it being much smaller than in the Tec family and is closer to Src. Srm is thought to be a new family of nonreceptor tyrosine kinases that may be redundant in function. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 79

>gnl|CDD|212944 cd12011, SH3_SLAP2, Src homology 3 domain of Src-Like Adaptor Protein 2

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK-NGSVGYIPSNYV 178
           V VAL  F +    +LS+  G +  ++ +  + WWKV     G   YIPSNYV
Sbjct: 1   VAVALCNFPSGGPTELSIRMGEQLTILSEDGD-WWKVSSAVTGRECYIPSNYV 52

SLAP2 plays a role in c-Cbl-dependent regulation of CSF1R, a tyrosine kinase important for myeloid cell growth and differentiation. It has been shown to interact with CSF1R, c-Cbl, LAT, CD247, and Zap70. SLAPs are adaptor proteins with limited similarity to Src family tyrosine kinases. They contain an N-terminal SH3 domain followed by an SH2 domain, and a unique C-terminal sequence. They function in regulating the signaling, ubiquitination, and trafficking of T-cell receptor (TCR) and B-cell receptor (BCR) components. The SH3 domain of SLAP forms a complex with v-Abl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|213002 cd12069, SH3_ARHGAP27, Src Homology 3 domain of Rho GTPase-activating protein 27

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 132 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKV-KDKNGSVGYIPSNYVKE 180
           + +   +G  +S++    Y ++  T EHWW V +DK     YIP+ YVKE
Sbjct: 8   FEYTGKDGRLVSIKPNERYILLRRTNEHWWHVRRDKGTRPFYIPAKYVKE 57

Rho GTPase-activating proteins (RhoGAPs or ARHGAPs) bind to Rho proteins and enhance the hydrolysis rates of bound GTP. ARHGAP27, also called CAMGAP1, shows GAP activity towards Rac1 and Cdc42. It binds the adaptor protein CIN85 and may play a role in clathrin-mediated endocytosis. It contains SH3, WW, Pleckstin homology (PH), and RhoGAP domains. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 57

>gnl|CDD|212858 cd11925, SH3_SH3RF3_3, Third Src Homology 3 domain of SH3 domain containing ring finger 3, an E3 ubiquitin-protein ligase

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYV 178
           + +ALY +K  +  +L L KG  Y V++  Q+ W+K    + G  G  P NYV
Sbjct: 2   IYLALYAYKPQKNDELELRKGEMYRVIEKCQDGWFKGTSLRTGVSGVFPGNYV 54

SH3RF3 is also called POSH2 (Plenty of SH3s 2) or SH3MD4 (SH3 multiple domains protein 4). It is a scaffold protein with E3 ubiquitin-protein ligase activity. It was identified in the screen for interacting partners of p21-activated kinase 2 (PAK2). It may play a role in regulating JNK mediated apoptosis in certain conditions. It also interacts with GTP-loaded Rac1. SH3RF3 is highly homologous to SH3RF1; it also contains an N-terminal RING finger domain and four SH3 domains. This model represents the third SH3 domain, located in the middle, of SH3RF3. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|198195 cd09942, SH2_nSH2_p85_like, N-terminal Src homology 2 (nSH2) domain found in p85

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 4/42 (9%)

Query: 256 AWYVGDMSRQRAESILK-QEDKEGCFVVRNSST-KGLYTLSL 295
            WY GD+SR+     ++   D  G F+VR++ST KG YTL+L
Sbjct: 8   EWYWGDISREEVNEKMRDTPD--GTFLVRDASTMKGDYTLTL 47

Phosphoinositide 3-kinases (PI3Ks) are essential for cell growth, migration, and survival. p110, the catalytic subunit, is composed of an adaptor-binding domain, a Ras-binding domain, a C2 domain, a helical domain, and a kinase domain. The regulatory unit is called p85 and is composed of an SH3 domain, a RhoGap domain, a N-terminal SH2 (nSH2) domain, an internal SH2 (iSH2) domain, and C-terminal (cSH2) domain. There are 2 inhibitory interactions between p110alpha and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110alpha and (2) p85 iSH2 domain with C2 domain of p110alpha. There are 3 inhibitory interactions between p110beta and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110beta, (2) p85 iSH2 domain with C2 domain of p110alpha, and (3) p85 cSH2 domain with the kinase domain of p110alpha. It is interesting to note that p110beta is oncogenic as a wild type protein while p110alpha lacks this ability. One explanation is the idea that the regulation of p110beta by p85 is unique because of the addition of inhibitory contacts from the cSH2 domain and the loss of contacts in the iSH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 110

>gnl|CDD|198185 cd09931, SH2_C-SH2_SHP_like, C-terminal Src homology 2 (C-SH2) domain found in SH2 domain Phosphatases (SHP) proteins

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHI 309
           W+ G +S + AE +L ++ K G F+VR S +K G + LS+  +     V H  I
Sbjct: 2   WFHGHLSGKEAEKLLLEKGKPGSFLVRESQSKPGDFVLSV--RTDDDKVTHIMI 53

The SH2 domain phosphatases (SHP-1, SHP-2/Syp, Drosophila corkscrew (csw), and Caenorhabditis elegans Protein Tyrosine Phosphatase (Ptp-2)) are cytoplasmic signaling enzymes. They are both targeted and regulated by interactions of their SH2 domains with phosphotyrosine docking sites. These proteins contain two SH2 domains (N-SH2, C-SH2) followed by a tyrosine phosphatase (PTP) domain, and a C-terminal extension. Shp1 and Shp2 have two tyrosyl phosphorylation sites in their C-tails, which are phosphorylated differentially by receptor and nonreceptor PTKs. Csw retains the proximal tyrosine and Ptp-2 lacks both sites. Shp-binding proteins include receptors, scaffolding adapters, and inhibitory receptors. Some of these bind both Shp1 and Shp2 while others bind only one. Most proteins that bind a Shp SH2 domain contain one or more immuno-receptor tyrosine-based inhibitory motifs (ITIMs): [SIVL]xpYxx[IVL]. Shp1 N-SH2 domain blocks the catalytic domain and keeps the enzyme in the inactive conformation, and is thus believed to regulate the phosphatase activity of SHP-1. Its C-SH2 domain is thought to be involved in searching for phosphotyrosine activators. The SHP2 N-SH2 domain is a conformational switch; it either binds and inhibits the phosphatase, or it binds phosphoproteins and activates the enzyme. The C-SH2 domain contributes binding energy and specificity, but it does not have a direct role in activation. Csw SH2 domain function is essential, but either SH2 domain can fulfill this requirement. The role of the csw SH2 domains during Sevenless receptor tyrosine kinase (SEV) signaling is to bind Daughter of Sevenless rather than activated SEV. Ptp-2 acts in oocytes downstream of sheath/oocyte gap junctions to promote major sperm protein (MSP)-induced MAP Kinase (MPK-1) phosphorylation. Ptp-2 functions in the oocyte cytoplasm, not at the cell surface to inhibit multiple RasGAPs, resulting in sustained Ras activation. It is thought that MSP triggers PTP-2/Ras activation and ROS production to stimulate MPK-1 activity essential for oocyte maturation and that secreted MSP domains and Cu/Zn superoxide dismutases function antagonistically to control ROS and MAPK signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|212708 cd11774, SH3_Sla1p_2, Second Src Homology 3 domain of the fungal endocytic adaptor protein Sla1p

 Score = 38.2 bits (89), Expect = 3e-04
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
             ALY +      +LS  +G   +V DD+   W  V       G++P+NY+
Sbjct: 2   AKALYDYDKQTEEELSFNEGDTLDVYDDSDSDWILVGFNGTQFGFVPANYI 52

Sla1p facilitates endocytosis by playing a role as an adaptor protein in coupling components of the actin cytoskeleton to the endocytic machinery. It interacts with Abp1p, Las17p and Pan1p, which are activator proteins of actin-related protein 2/3 (Arp2/3). Sla1p contains multiple domains including three SH3 domains, a SAM (sterile alpha motif) domain, and a Sla1 homology domain 1 (SHD1), which binds to the NPFXD motif that is found in many integral membrane proteins such as the Golgi-localized Arf-binding protein Lsb5p and the P4-ATPases, Drs2p and Dnf1p. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212764 cd11830, SH3_VAV_2, C-terminal (or second) Src homology 3 domain of VAV proteins

 Score = 38.4 bits (89), Expect = 3e-04
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDD-TQEHWWKVKDKNGSVGYIPSNYVKE 180
              A Y F A +  +LSL++G   ++ +   Q+ WW+  + NG +G+ PS YV+E
Sbjct: 1   TAKARYDFCARDMRELSLKEGDVVKIYNKKGQQGWWR-GEINGRIGWFPSTYVEE 54

VAV proteins function both as cytoplasmic guanine nucleotide exchange factors (GEFs) for Rho GTPases and scaffold proteins and they play important roles in cell signaling by coupling cell surface receptors to various effector functions. They play key roles in processes that require cytoskeletal reorganization including immune synapse formation, phagocytosis, cell spreading, and platelet aggregation, among others. Vertebrates have three VAV proteins (VAV1, VAV2, and VAV3). VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 42.4 bits (99), Expect = 4e-04
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 9/71 (12%)

Query: 430 ELMLLEELGSGQFGVVRRGKW-------RGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQ 480
           EL  ++ LGSG FG V +G W       +  + + ++ E  G  +  +F++EA +M  + 
Sbjct: 8   ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 67

Query: 481 HQNLVQLYGVC 491
           H +LV+L GVC
Sbjct: 68  HPHLVRLLGVC 78

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|198282 cd10419, SH2_Src_Fyn_isoform_b_like, Src homology 2 (SH2) domain found in Fyn isoform b like proteins

 Score = 39.3 bits (91), Expect = 4e-04
 Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 333 DKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV 389
           +  G F++R S +TKG Y+LS+  +  +   HVKHY I++   G ++++ +    ++ ++
Sbjct: 24  NPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQL 83

Query: 390 VNYHRHNSGGLASRL 404
           V ++   + GL   L
Sbjct: 84  VQHYSEKADGLCFNL 98

Fyn is a member of the Src non-receptor type tyrosine kinase family of proteins. This cd contains the SH2 domain found in Fyn isoform b type proteins. Fyn is involved in the control of cell growth and is required in the following pathways: T and B cell receptor signaling, integrin-mediated signaling, growth factor and cytokine receptor signaling, platelet activation, ion channel function, cell adhesion, axon guidance, fertilization, entry into mitosis, and differentiation of natural killer cells, oligodendrocytes and keratinocytes. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and interacts with the Fyn-binding protein. Alternatively spliced transcript variants encoding distinct isoforms exist. Fyn is primarily localized to the cytoplasmic leaflet of the plasma membrane. Tyrosine phosphorylation of target proteins by Fyn serves to either regulate target protein activity, and/or to generate a binding site on the target protein that recruits other signaling molecules. FYN has been shown to interact with a number of proteins including: BCAR1, Cbl, Janus kinase, nephrin, Sky, tyrosine kinase, Wiskott-Aldrich syndrome protein, and Zap-70. Fyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198207 cd10344, SH2_SLAP, Src homology 2 domain found in Src-like adaptor proteins

 Score = 39.4 bits (92), Expect = 4e-04
 Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 3/71 (4%)

Query: 333 DKEGCFVVRNSST-KGLYTLSLYTKVPHPH--VKHYHIKQNSRGEFFLSEKHCCHSIPEV 389
           ++ G F++R S T +G Y+LS+  +       VKHY I +   G F++S +     + ++
Sbjct: 31  NQVGSFLIRESETRRGCYSLSVRHRGSQSRDSVKHYRIFRLDNGWFYISPRLTFQCLEDM 90

Query: 390 VNYHRHNSGGL 400
           VN++  ++ GL
Sbjct: 91  VNHYSESADGL 101

SLAP belongs to the subfamily of adapter proteins that negatively regulate cellular signaling initiated by tyrosine kinases. It has a myristylated N-terminus, SH3 and SH2 domains with high homology to Src family tyrosine kinases, and a unique C-terminal tail, which is important for c-Cbl binding. SLAP negatively regulates platelet-derived growth factor (PDGF)-induced mitogenesis in fibroblasts and regulates F-actin assembly for dorsal ruffles formation. c-Cbl mediated SLAP inhibition towards actin remodeling. Moreover, SLAP enhanced PDGF-induced c-Cbl phosphorylation by SFK. In contrast, SLAP mitogenic inhibition was not mediated by c-Cbl, but it rather involved a competitive mechanism with SFK for PDGF-receptor (PDGFR) association and mitogenic signaling. Accordingly, phosphorylation of the Src mitogenic substrates Stat3 and Shc were reduced by SLAP. Thus, we concluded that SLAP regulates PDGFR signaling by two independent mechanisms: a competitive mechanism for PDGF-induced Src mitogenic signaling and a non-competitive mechanism for dorsal ruffles formation mediated by c-Cbl. SLAP is a hematopoietic adaptor containing Src homology (SH)3 and SH2 motifs and a unique carboxy terminus. Unlike c-Src, SLAP lacks a tyrosine kinase domain. Unlike c-Src, SLAP does not impact resorptive function of mature osteoclasts but induces their early apoptosis. SLAP negatively regulates differentiation of osteoclasts and proliferation of their precursors. Conversely, SLAP decreases osteoclast death by inhibiting activation of caspase 3. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198227 cd10364, SH2_Src_Lyn, Src homology 2 (SH2) domain found in Lyn

 Score = 39.6 bits (92), Expect = 4e-04
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 333 DKEGCFVVRNSST-KGLYTLSLYTKVPHPH--VKHYHIKQNSRGEFFLSEKHCCHSIPEV 389
           +  G F++R S T KG Y+LS+    P     +KHY I+    G +++S +     I ++
Sbjct: 24  NSAGAFLIRESETLKGSYSLSVRDYDPQHGDVIKHYKIRSLDNGGYYISPRITFPCISDM 83

Query: 390 VNYHRHNSGGLASRLK 405
           + +++  S GL  RL+
Sbjct: 84  IKHYQKQSDGLCRRLE 99

Lyn is a member of the Src non-receptor type tyrosine kinase family of proteins and is expressed in the hematopoietic cells, in neural tissues, liver, and adipose tissue. There are two alternatively spliced forms of Lyn. Lyn plays an inhibitory role in myeloid lineage proliferation. Following engagement of the B cell receptors, Lyn undergoes rapid phosphorylation and activation, triggering a cascade of signaling events mediated by Lyn phosphorylation of tyrosine residues within the immunoreceptor tyrosine-based activation motifs (ITAM) of the receptor proteins, and subsequent recruitment and activation of other kinases including Syk, phospholipase C2 (PLC2) and phosphatidyl inositol-3 kinase. These kinases play critical roles in proliferation, Ca2+ mobilization and cell differentiation. Lyn plays an essential role in the transmission of inhibitory signals through phosphorylation of tyrosine residues within the immunoreceptor tyrosine-based inhibitory motifs (ITIM) in regulatory proteins such as CD22, PIR-B and FC RIIb1. Their ITIM phosphorylation subsequently leads to recruitment and activation of phosphatases such as SHIP-1 and SHP-1 which further down modulate signaling pathways, attenuate cell activation and can mediate tolerance. Lyn also plays a role in the insulin signaling pathway. Activated Lyn phosphorylates insulin receptor substrate 1 (IRS1) leading to an increase in translocation of Glut-4 to the cell membrane and increased glucose utilization. It is the primary Src family member involved in signaling downstream of the B cell receptor. Lyn plays an unusual, 2-fold role in B cell receptor signaling; it is essential for initiation of signaling but is also later involved in negative regulation of the signal. Lyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|213005 cd12072, SH3_FNBP1L, Src Homology 3 domain of Formin Binding Protein 1-Like

 Score = 38.4 bits (89), Expect = 4e-04
 Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 130 ALYPFKAIEGGDLSLEKG-AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           ALYPF     G L++++G   Y + +D  + W + + +NG  GY+P++Y++
Sbjct: 5   ALYPFDGSNEGTLAMKEGEVLYIIEEDKGDGWTRARKQNGEEGYVPTSYIE 55

FormiN Binding Protein 1-Like (FNBP1L), also known as Toca-1 (Transducer of Cdc42-dependent actin assembly), forms a complex with neural Wiskott-Aldrich syndrome protein (N-WASP). The FNBP1L/N-WASP complex induces the formation of filopodia and endocytic vesicles. FNBP1L is required for Cdc42-induced actin assembly and is essential for autophagy of intracellular pathogens. It contains an N-terminal F-BAR domain, a central Cdc42-binding HR1 domain, and a C-terminal SH3 domain. The SH3 domain of the related protein, CIP4, associates with Gapex-5, a Rab31 GEF. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|198191 cd09938, SH2_N-SH2_Zap70_Syk_like, N-terminal Src homology 2 (SH2) domain found in Zeta-chain-associated protein kinase 70 (ZAP-70) and Spleen tyrosine kinase (Syk) proteins

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 335 EGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
           +G F++R S  + G Y LS+          HY I++   G + ++         E+  YH
Sbjct: 24  DGLFLLRQSLRSLGGYVLSV---CHGRKFHHYTIERQLNGTYAIAGGKAHCGPAELCEYH 80

Query: 394 RHNSGGLASRLKTSPCDRPV 413
             +  GL   L+  PC+RP 
Sbjct: 81  STDLDGLVCLLR-KPCNRPP 99

ZAP-70 and Syk comprise a family of hematopoietic cell specific protein tyrosine kinases (PTKs) that are required for antigen and antibody receptor function. ZAP-70 is expressed in T and natural killer (NK) cells and Syk is expressed in B cells, mast cells, polymorphonuclear leukocytes, platelets, macrophages, and immature T cells. They are required for the proper development of T and B cells, immune receptors, and activating NK cells. They consist of two N-terminal Src homology 2 (SH2) domains and a C-terminal kinase domain separated from the SH2 domains by a linker or hinge region. Phosphorylation of both tyrosine residues within the Immunoreceptor Tyrosine-based Activation Motifs (ITAM; consensus sequence Yxx[LI]x(7,8)Yxx[LI]) by the Src-family PTKs is required for efficient interaction of ZAP-70 and Syk with the receptor subunits and for receptor function. ZAP-70 forms two phosphotyrosine binding pockets, one of which is shared by both SH2 domains. In Syk the two SH2 domains do not form such a phosphotyrosine-binding site. The SH2 domains here are believed to function independently. In addition, the two SH2 domains of Syk display flexibility in their relative orientation, allowing Syk to accommodate a greater variety of spacing sequences between the ITAM phosphotyrosines and singly phosphorylated non-classical ITAM ligands. This model contains the N-terminus SH2 domains of both Syk and Zap70. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 41.5 bits (97), Expect = 5e-04
 Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 7/63 (11%)

Query: 436 ELGSGQFGVVRRGKWR---GSIDVAM--MKEGTMS--EDDFIEEAKVMTRLQHQNLVQLY 488
           ELGSG FG V++G ++     IDVA+  +K        D+ + EA++M +L +  +V++ 
Sbjct: 2   ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMI 61

Query: 489 GVC 491
           GVC
Sbjct: 62  GVC 64

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|212940 cd12007, SH3_Yes, Src homology 3 domain of Yes Protein Tyrosine Kinase

 Score = 38.1 bits (88), Expect = 5e-04
 Identities = 13/41 (31%), Positives = 26/41 (63%)

Query: 74  VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKN 114
           + VALY ++A    DLS +KG  ++++++T+  WW+ +   
Sbjct: 2   IFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIA 42

Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 41.9 bits (98), Expect = 5e-04
 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 10/89 (11%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSID------VAMM---KEGTMSED-DFIEEA 473
           WE+   ++ +  ELG G FG+V  G  +G +       VA+    +  +M E  +F+ EA
Sbjct: 1   WEVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 60

Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
            VM      ++V+L GV S+ +P  ++ +
Sbjct: 61  SVMKEFNCHHVVRLLGVVSQGQPTLVIME 89

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 41.6 bits (98), Expect = 5e-04
 Identities = 13/22 (59%), Positives = 19/22 (86%)

Query: 208 RFSSKSDVWAYGVLMWEVFTCG 229
           +FSS SDVW++GV ++E+FT G
Sbjct: 188 KFSSASDVWSFGVTLYELFTYG 209

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 41.8 bits (98), Expect = 5e-04
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 8/46 (17%)

Query: 4   GSLLNYLRRHENTLGGNVGL--LLDMCIQVCKGMAYLERHNYIHRE 47
           GSL +YL +H       + L  LL    Q+C+GMAYL   +YIHR+
Sbjct: 93  GSLRDYLPKH------KLNLAQLLLFAQQICEGMAYLHSQHYIHRD 132

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|219499 pfam07653, SH3_2, Variant SH3 domain

 Score = 37.8 bits (89), Expect = 5e-04
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 140 GDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            +LSL+KG   +V+D     WW+  ++ G  G +PS+YV+E
Sbjct: 14  NELSLKKGDVVKVLDKDDNGWWEG-ERGGRRGLVPSSYVEE 53

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 53

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 42.2 bits (99), Expect = 5e-04
 Identities = 13/28 (46%), Positives = 22/28 (78%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRL 236
           ++ +SDVW+YG+L+WE+F+ G  PY  +
Sbjct: 293 YTFESDVWSYGILLWEIFSLGSSPYPGM 320

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|198251 cd10388, SH2_SOCS7, Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins

 Score = 38.9 bits (91), Expect = 5e-04
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 4/55 (7%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTK--VPHPHVKHYH 308
           WY G MS + AE +L  +  +G F+VR+SS  + +++LS  ++  V H  ++ Y 
Sbjct: 12  WYWGPMSWEDAEKVLSNK-PDGSFLVRDSSDDRYIFSLSFRSQGSVHHTRIEQYQ 65

SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|212815 cd11882, SH3_GRAF-like, Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase and similar proteins

 Score = 37.7 bits (88), Expect = 5e-04
 Identities = 19/52 (36%), Positives = 24/52 (46%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
             ALY  KA +  +LS E G     +  + E  W     NG  G IP NYV+
Sbjct: 2   ARALYACKAEDESELSFEPGQIITNVQPSDEPGWLEGTLNGRTGLIPENYVE 53

This subfamily is composed of Rho GTPase activating proteins (GAPs) with similarity to GRAF. Members contain an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, a Rho GAP domain, and a C-terminal SH3 domain. Although vertebrates harbor four Rho GAPs in the GRAF subfamily including GRAF, GRAF2, GRAF3, and Oligophrenin-1 (OPHN1), only three are included in this model. OPHN1 contains the BAR, PH and GAP domains, but not the C-terminal SH3 domain. GRAF and GRAF2 show GAP activity towards RhoA and Cdc42. GRAF influences Rho-mediated cytoskeletal rearrangements and binds focal adhesion kinase. GRAF2 regulates caspase-activated p21-activated protein kinase-2. The SH3 domain of GRAF and GRAF2 binds PKNbeta, a target of the small GTPase Rho. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 54

>gnl|CDD|212698 cd11764, SH3_Eps8, Src Homology 3 domain of Epidermal growth factor receptor kinase substrate 8 and similar proteins

 Score = 37.6 bits (88), Expect = 6e-04
 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           V  LY F A    +LS+ KG   EV+DD+++ WWKV++  G
Sbjct: 2   VRVLYDFTARNSKELSVLKGEYLEVLDDSRQ-WWKVRNSRG 41

This group is composed of Eps8 and Eps8-like proteins including Eps8-like 1-3, among others. These proteins contain N-terminal Phosphotyrosine-binding (PTB), central SH3, and C-terminal effector domains. Eps8 binds either Abi1 (also called E3b1) or Rab5 GTPase activating protein RN-tre through its SH3 domain. With Abi1 and Sos1, it becomes part of a trimeric complex that is required to activate Rac. Together with RN-tre, it inhibits the internalization of EGFR. The SH3 domains of Eps8 and similar proteins recognize peptides containing a PxxDY motif, instead of the classical PxxP motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212704 cd11770, SH3_Nephrocystin, Src Homology 3 domain of Nephrocystin (or Nephrocystin-1)

 Score = 37.7 bits (88), Expect = 6e-04
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
             AL  F+A + GDLS +KG    ++    + WW  ++  G R
Sbjct: 2   YEALSDFQAEQEGDLSFKKGEVLRIISKRADGWWLAENSKGNR 44

Nephrocystin contains an SH3 domain involved in signaling pathways that regulate cell adhesion and cytoskeletal organization. It is a protein that in humans is associated with juvenile nephronophthisis, an inherited kidney disease characterized by renal fibrosis that lead to chronic renal failure in children. It is localized in cell-cell junctions in renal duct cells, and is known to interact with Ack1, an activated Cdc42-associated kinase. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 41.5 bits (97), Expect = 6e-04
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 27/96 (28%)

Query: 431 LMLLEELGSGQFGVV--------------------RRGKWRGSIDVAMM----KEGTMSE 466
           L+  E+LG GQFG V                    R+G+    + VA+          + 
Sbjct: 7   LLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGR---PLLVAVKILRPDANKNAR 63

Query: 467 DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +DF++E K+++RL+  N+++L GVC    P+ ++T+
Sbjct: 64  NDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITE 99

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|212707 cd11773, SH3_Sla1p_1, First Src Homology 3 domain of the fungal endocytic adaptor protein Sla1p

 Score = 37.8 bits (88), Expect = 6e-04
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 6/57 (10%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK------DKNGSVGYIPSNY 177
           V  ALY ++     +L++++     +++ + + WWKVK      D +  VG +P+ Y
Sbjct: 1   VYKALYDYEPQTEDELTIQEDDILYLLEKSDDDWWKVKLKVNSSDDDEPVGLVPATY 57

Sla1p facilitates endocytosis by playing a role as an adaptor protein in coupling components of the actin cytoskeleton to the endocytic machinery. It interacts with Abp1p, Las17p and Pan1p, which are activator proteins of actin-related protein 2/3 (Arp2/3). Sla1p contains multiple domains including three SH3 domains, a SAM (sterile alpha motif) domain, and a Sla1 homology domain 1 (SHD1), which binds to the NPFXD motif that is found in many integral membrane proteins such as the Golgi-localized Arf-binding protein Lsb5p and the P4-ATPases, Drs2p and Dnf1p. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212836 cd11903, SH3_Nck2_3, Third Src Homology 3 domain of Nck2 adaptor protein

 Score = 37.7 bits (87), Expect = 7e-04
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 74  VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGI 116
           VV  LYPF ++   +L+ EKG   EV++  +    WWK K+  G 
Sbjct: 2   VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNSRGQ 46

Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds neuronal signaling proteins such as ephrinB and Disabled-1 (Dab-1) exclusively. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The third SH3 domain of Nck appears to prefer ligands with a PxAPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|198179 cd09925, SH2_SHC, Src homology 2 (SH2) domain found in SH2 adaptor protein C (SHC)

 Score = 38.9 bits (91), Expect = 7e-04
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%)

Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPH 303
           + WY G MSR+ AES+L+    +G F+VR S+T  G Y L+        H
Sbjct: 7   EPWYHGKMSRRDAESLLQT---DGDFLVRESTTTPGQYVLTGMQNGQPKH 53

SHC is involved in a wide variety of pathways including regulating proliferation, angiogenesis, invasion and metastasis, and bone metabolism. An adapter protein, SHC has been implicated in Ras activation following the stimulation of a number of different receptors, including growth factors [insulin, epidermal growth factor (EGF), nerve growth factor, and platelet derived growth factor (PDGF)], cytokines [interleukins 2, 3, and 5], erythropoietin, and granulocyte/macrophage colony-stimulating factor, and antigens [T-cell and B-cell receptors]. SHC has been shown to bind to tyrosine-phosphorylated receptors, and receptor stimulation leads to tyrosine phosphorylation of SHC. Upon phosphorylation, SHC interacts with another adapter protein, Grb2, which binds to the Ras GTP/GDP exchange factor mSOS which leads to Ras activation. SHC is composed of an N-terminal domain that interacts with proteins containing phosphorylated tyrosines, a (glycine/proline)-rich collagen-homology domain that contains the phosphorylated binding site, and a C-terminal SH2 domain. SH2 has been shown to interact with the tyrosine-phosphorylated receptors of EGF and PDGF and with the tyrosine-phosphorylated C chain of the T-cell receptor, providing one of the mechanisms of T-cell-mediated Ras activation. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|212893 cd11960, SH3_Abp1_eu, Src homology 3 domain of eumetazoan Actin-binding protein 1

 Score = 37.4 bits (87), Expect = 7e-04
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 6/53 (11%)

Query: 130 ALYPFKAIEGGDLSLEKG---AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           ALY ++A +  ++S + G    + E +D   E WW+    +G+ G  P+NYV+
Sbjct: 4   ALYDYQAADDTEISFDPGDIITDIEQID---EGWWRGTGPDGTYGLFPANYVE 53

Abp1, also called drebrin-like protein, is an adaptor protein that functions in receptor-mediated endocytosis and vesicle trafficking. It contains an N-terminal actin-binding module, the actin-depolymerizing factor (ADF) homology domain, a helical domain, and a C-terminal SH3 domain. Mammalian Abp1, unlike yeast Abp1, does not contain an acidic domain that interacts with the Arp2/3 complex. It regulates actin dynamics indirectly by interacting with dynamin and WASP family proteins. Abp1 deficiency causes abnormal organ structure and function of the spleen, heart, and lung of mice. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|198195 cd09942, SH2_nSH2_p85_like, N-terminal Src homology 2 (nSH2) domain found in p85

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 10/74 (13%)

Query: 330 EVKDK-----EGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCC 383
           EV +K     +G F+VR++ST KG YTL+L     +  +K +H      G++  S+    
Sbjct: 18  EVNEKMRDTPDGTFLVRDASTMKGDYTLTLRKGGNNKLIKIFH----RDGKYGFSDPLTF 73

Query: 384 HSIPEVVNYHRHNS 397
           +S+ E++NY+R+NS
Sbjct: 74  NSVVELINYYRNNS 87

Phosphoinositide 3-kinases (PI3Ks) are essential for cell growth, migration, and survival. p110, the catalytic subunit, is composed of an adaptor-binding domain, a Ras-binding domain, a C2 domain, a helical domain, and a kinase domain. The regulatory unit is called p85 and is composed of an SH3 domain, a RhoGap domain, a N-terminal SH2 (nSH2) domain, an internal SH2 (iSH2) domain, and C-terminal (cSH2) domain. There are 2 inhibitory interactions between p110alpha and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110alpha and (2) p85 iSH2 domain with C2 domain of p110alpha. There are 3 inhibitory interactions between p110beta and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110beta, (2) p85 iSH2 domain with C2 domain of p110alpha, and (3) p85 cSH2 domain with the kinase domain of p110alpha. It is interesting to note that p110beta is oncogenic as a wild type protein while p110alpha lacks this ability. One explanation is the idea that the regulation of p110beta by p85 is unique because of the addition of inhibitory contacts from the cSH2 domain and the loss of contacts in the iSH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 110

>gnl|CDD|212949 cd12016, SH3_Tks_2, Second Src homology 3 domain of Tyrosine kinase substrate (Tks) proteins

 Score = 37.4 bits (87), Expect = 8e-04
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           +    +KA    ++  E G   EV+    + WWK++ + G  G+ P+ Y+K
Sbjct: 4   ITTQAYKAENEDEIGFETGVVVEVIQKNLDGWWKIRYQ-GKEGWAPATYLK 53

Tks proteins are Src substrates and scaffolding proteins that play important roles in the formation of podosomes and invadopodia, the dynamic actin-rich structures that are related to cell migration and cancer cell invasion. Vertebrates contain two Tks proteins, Tks4 (Tyr kinase substrate with four SH3 domains) and Tks5 (Tyr kinase substrate with five SH3 domains), which display partially overlapping but non-redundant functions. Both associate with the ADAMs family of transmembrane metalloproteases, which function as sheddases and mediators of cell and matrix interactions. Tks5 interacts with N-WASP and Nck, while Tks4 is essential for the localization of MT1-MMP (membrane-type 1 matrix metalloproteinase) to invadopodia. Tks proteins contain an N-terminal Phox homology (PX) domain and four or five SH3 domains. This model characterizes the second SH3 domain of Tks proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212998 cd12065, SH3_GRAF2, Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase 2

 Score = 37.3 bits (86), Expect = 8e-04
 Identities = 20/50 (40%), Positives = 28/50 (56%)

Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           A+YP +A    +LS E GA +E +  ++E  W     NG  G IP NYV+
Sbjct: 4   AVYPCEAEHSSELSFEVGAIFEDVTLSREPGWLEGTLNGKRGLIPENYVE 53

GRAF2, also called Rho GTPase activating protein 10 (ARHGAP10) or PS-GAP, is a GAP with activity towards Cdc42 and RhoA. It regulates caspase-activated p21-activated protein kinase-2 (PAK-2p34). GRAF2 interacts with PAK-2p34, leading to its stabilization and decrease of cell death. It is highly expressed in skeletal muscle, and is involved in alpha-catenin recruitment at cell-cell junctions. GRAF2 contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, a Rho GAP domain, and a C-terminal SH3 domain. The SH3 domain of GRAF binds PKNbeta, a target of the small GTPase Rho. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 54

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 41.2 bits (96), Expect = 9e-04
 Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 9/79 (11%)

Query: 431 LMLLEELGSGQFGVVRRGKW--------RGSIDVAMMKEGT-MSEDDFIEEAKVMTRLQH 481
           ++L  ELG G FG V   +         +  + V  +K+ +  +  DF  EA+++T LQH
Sbjct: 7   IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH 66

Query: 482 QNLVQLYGVCSKHRPIYIV 500
           +++V+ YGVC +  P+ +V
Sbjct: 67  EHIVKFYGVCVEGDPLIMV 85

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|212754 cd11820, SH3_STAM, Src homology 3 domain of Signal Transducing Adaptor Molecules

 Score = 37.1 bits (86), Expect = 9e-04
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGI 116
           V ALY F+A E  +L+ + G    V+DD+  +WWK  +  G 
Sbjct: 3   VRALYDFEAAEDNELTFKAGEIITVLDDSDPNWWKGSNHRGE 44

STAMs were discovered as proteins that are highly phosphorylated following cytokine and growth factor stimulation. They function in cytokine signaling and surface receptor degradation, as well as regulate Golgi morphology. They associate with many proteins including Jak2 and Jak3 tyrosine kinases, Hrs, AMSH, and UBPY. STAM adaptor proteins contain VHS (Vps27, Hrs, STAM homology), ubiquitin interacting (UIM), and SH3 domains. There are two vertebrate STAMs, STAM1 and STAM2, which may be functionally redundant; vertebrate STAMs contain ITAM motifs. They are part of the endosomal sorting complex required for transport (ESCRT-0). STAM2 deficiency in mice did not cause any obvious abnormality, while STAM1 deficiency resulted in growth retardation. Loss of both STAM1 and STAM2 in mice proved lethal, indicating that STAMs are important for embryonic development. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212760 cd11826, SH3_Abi, Src homology 3 domain of Abl Interactor proteins

 Score = 36.9 bits (86), Expect = 9e-04
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
           VVALY + A +  +LS ++G    V     + W++    NG  G  P NYV
Sbjct: 2   VVALYDYTADKDDELSFQEGDIIYVTKKNDDGWYE-GVLNGVTGLFPGNYV 51

Abl interactor (Abi) proteins are adaptor proteins serving as binding partners and substrates of Abl tyrosine kinases. They are involved in regulating actin cytoskeletal reorganization and play important roles in membrane-ruffling, endocytosis, cell motility, and cell migration. They localize to sites of actin polymerization in epithelial adherens junction and immune synapses, as well as to the leading edge of lamellipodia. Vertebrates contain two Abi proteins, Abi1 and Abi2. Abi1 displays a wide expression pattern while Abi2 is highly expressed in the eye and brain. Abi proteins contain a homeobox homology domain, a proline-rich region, and a SH3 domain. The SH3 domain of Abi binds to a PxxP motif in Abl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212921 cd11988, SH3_Intersectin2_1, First Src homology 3 domain (or SH3A) of Intersectin-2

 Score = 37.2 bits (86), Expect = 9e-04
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDT-QEHWWKVKDKNGSVGYIPSNYVKE 180
           ALYPF+A    ++S   G   +V + T  E  W      G+ G+ P NYV++
Sbjct: 6   ALYPFEARNHDEMSFNAGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEK 57

Intersectin-2 (ITSN2) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN2 also functions as a specific GEF for Cdc42 activation in epithelial morphogenesis, and is required in mitotic spindle orientation. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The first SH3 domain (or SH3A) of ITSN2 is expected to bind many protein partners, similar to ITSN1 which has been shown to bind Sos1, dynamin1/2, CIN85, c-Cbl, PI3K-C2, SHIP2, N-WASP, and CdGAP, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|199829 cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src homology 2 (N-SH2) domain in Phospholipase C gamma

 Score = 38.5 bits (90), Expect = 9e-04
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 7/70 (10%)

Query: 332 KDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIK---QNSRGEFFLSEKHCCHSIP 387
           +  +G F+VR S T  G YTLS +       V+H  I+   +N   +++L++     S+ 
Sbjct: 27  EGGDGTFLVRESETFVGDYTLSFWRN---GKVQHCRIRSRQENGEKKYYLTDNLVFDSLY 83

Query: 388 EVVNYHRHNS 397
           E+++Y+R N 
Sbjct: 84  ELIDYYRQNP 93

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|212784 cd11850, SH3_Abl, Src homology 3 domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 37.0 bits (86), Expect = 9e-04
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQ-EHWWKVK-DKNGSVGYIPSNYV 178
           VALY F A     LS++KG +  V+   +   W + +    G  G++PSNY+
Sbjct: 3   VALYDFVASGENQLSIKKGEQLRVLGYNKNGEWCEAESKSTGGQGWVPSNYI 54

Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) PTK that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 2   RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
            +G LLN+LRR   +    +  LL    QV KGMA+L   N IHR+
Sbjct: 122 CYGDLLNFLRRKRESFL-TLEDLLSFSYQVAKGMAFLASKNCIHRD 166

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|212882 cd11949, SH3_GRB2_C, C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
           V AL+ F   E G+L   +G   EVMD++  +WWK
Sbjct: 2   VQALFDFDPQEDGELGFRRGDFIEVMDNSDPNWWK 36

GRB2 is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. It is ubiquitously expressed in all tissues throughout development and is important in cell cycle progression, motility, morphogenesis, and angiogenesis. In lymphocytes, GRB2 is associated with antigen receptor signaling components. GRB2 contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domain of GRB2 binds to Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, as well as to the proline-rich C-terminus of FGRF2. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212739 cd11805, SH3_GRB2_like_C, C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2 (GRB2) and related proteins

 Score = 36.8 bits (86), Expect = 0.001
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
           V ALY F   E G+L   +G    V+D +   WWK  ++ + GI
Sbjct: 2   VQALYDFNPQEPGELEFRRGDIITVLDSSDPDWWKGELRGRVGI 45

This family includes the adaptor protein GRB2 and related proteins including Drosophila melanogaster Downstream of receptor kinase (DRK), Caenorhabditis elegans Sex muscle abnormal protein 5 (Sem-5), GRB2-related adaptor protein (GRAP), GRAP2, and similar proteins. Family members contain an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. GRB2/Sem-5/DRK is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. GRAP2 plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. GRAP acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. The C-terminal SH3 domains (SH3c) of GRB2 and GRAP2 have been shown to bind to classical PxxP motif ligands, as well as to non-classical motifs. GRB2 SH3c binds Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, while the SH3c of GRAP2 binds to the phosphatase-like protein HD-PTP via a RxxxxK motif. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M+HG L N++R   +     V  L+   +QV KGM YL    ++HR+
Sbjct: 79  MKHGDLRNFIRSETHN--PTVKDLIGFGLQVAKGMEYLASKKFVHRD 123

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 21/93 (22%)

Query: 431 LMLLEELGSGQFGVVRRGKWRGSID-------------------VAMMKE--GTMSEDDF 469
           L   E+LG GQFG V   +  G                      V M++E     + +DF
Sbjct: 7   LTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDF 66

Query: 470 IEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           ++E K+M+RL+  N+++L  VC    P+ ++T+
Sbjct: 67  LKEIKIMSRLKDPNIIRLLAVCITSDPLCMITE 99

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|212821 cd11888, SH3_ARHGAP9_like, Src Homology 3 domain of Rho GTPase-activating protein 9 and similar proteins

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 3/48 (6%)

Query: 74  VVVALYPF--KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKP 119
            VV LYPF     +G  +S+++G  + ++  + + WW+V+ + G  KP
Sbjct: 1   YVVVLYPFEYTGKDGRKVSIKEGERFLLLKKSNDDWWQVR-RPGDSKP 47

This subfamily is composed of Rho GTPase-activating proteins including mammalian ARHGAP9, and vertebrate ARHGAPs 12 and 27. RhoGAPs (or ARHGAPs) bind to Rho proteins and enhance the hydrolysis rates of bound GTP. ARHGAP9 functions as a GAP for Rac and Cdc42, but not for RhoA. It negatively regulates cell migration and adhesion. It also acts as a docking protein for the MAP kinases Erk2 and p38alpha, and may facilitate cross-talk between the Rho GTPase and MAPK pathways to control actin remodeling. ARHGAP27, also called CAMGAP1, shows GAP activity towards Rac1 and Cdc42. It binds the adaptor protein CIN85 and may play a role in clathrin-mediated endocytosis. ARHGAP12 has been shown to display GAP activity towards Rac1. It plays a role in regulating HFG-driven cell growth and invasiveness. ARHGAPs in this subfamily contain SH3, WW, Pleckstin homology (PH), and RhoGAP domains. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 54

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 40.7 bits (96), Expect = 0.001
 Identities = 20/72 (27%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVA--MMKEGTMSEDDFI-EEAKVMTRLQHQNLVQLY 488
           +LE++G G FG V + + + +  +VA  ++K  +  + + I  E +++ + +H N+V+ Y
Sbjct: 4   ILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYY 63

Query: 489 GVCSKHRPIYIV 500
           G   K   ++IV
Sbjct: 64  GSYLKKDELWIV 75

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 41.0 bits (96), Expect = 0.001
 Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 6/73 (8%)

Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD------FIEEAKVMTRLQHQNLVQL 487
           +E++G G +GVV + + R + +   +K+  + ++D       I E  ++  +QH N+V+L
Sbjct: 7   VEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66

Query: 488 YGVCSKHRPIYIV 500
             V    + +Y+V
Sbjct: 67  QDVVHSEKRLYLV 79

Length = 294

>gnl|CDD|198200 cd10337, SH2_BCAR3, Src homology 2 (SH2) domain in the Breast Cancer Anti-estrogen Resistance protein 3

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 256 AWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVK 305
           AWY G + RQ AES++++   EG F+VR+S S+ G Y L+   K    H K
Sbjct: 7   AWYHGRIPRQVAESLVQR---EGDFLVRDSLSSPGDYVLTCRWKGQPLHFK 54

BCAR3 is part of a growing family of guanine nucleotide exchange factors is responsible for activation of Ras-family GTPases, including Sos1 and 2, GRF1 and 2, CalDAG-GEF/GRP1-4, C3G, cAMP-GEF/Epac 1 and 2, PDZ-GEFs, MR-GEF, RalGDS family members, RalGPS, RasGEF, Smg GDS, and phospholipase C(epsilon). 12102558 21262352 BCAR3 binds to the carboxy-terminus of BCAR1/p130Cas, a focal adhesion adapter protein. Over expression of BCAR1 (p130Cas) and BCAR3 induces estrogen independent growth in normally estrogen-dependent cell lines. They have been linked to resistance to anti-estrogens in breast cancer, Rac activation, and cell motility, though the BCAR3/p130Cas complex is not required for this activity in BCAR3. Many BCAR3-mediated signaling events in epithelial and mesenchymal cells are independent of p130Cas association. Structurally these proteins contain a single SH2 domain upstream of their RasGEF domain, which is responsible for the ability of BCAR3 to enhance p130Cas over-expression-induced migration. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 136

>gnl|CDD|212997 cd12064, SH3_GRAF, Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase

 Score = 36.6 bits (84), Expect = 0.001
 Identities = 19/50 (38%), Positives = 25/50 (50%)

Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           ALY  KA    +LS   G  ++ +  +QE  W     NG  G IP NYV+
Sbjct: 5   ALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVE 54

GRAF, also called Rho GTPase activating protein 26 (ARHGAP26), Oligophrenin-1-like (OPHN1L) or GRAF1, is a GAP with activity towards RhoA and Cdc42 and is only weakly active towards Rac1. It influences Rho-mediated cytoskeletal rearrangements and binds focal adhesion kinase (FAK), which is a critical component of integrin signaling. It is essential for the major clathrin-independent endocytic pathway mediated by pleiomorphic membranes. GRAF contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, a Rho GAP domain, and a C-terminal SH3 domain. The SH3 domain of GRAF binds PKNbeta, a target of the small GTPase Rho. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 56

>gnl|CDD|198196 cd09943, SH2_Nck_family, Src homology 2 (SH2) domain found in the Nck family

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)

Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNS 313
           + WY G ++R +AE++L +   EG F++R+S S  G Y++SL     + H K   +  N 
Sbjct: 1   QPWYYGRITRHQAETLLNEHGHEGDFLIRDSESNPGDYSVSLKAPGRNKHFK-VQVVDNV 59

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 93

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 10/76 (13%)

Query: 437 LGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED-----DFIEEAKVMTRLQHQNLVQ 486
           LG G+FG V   K +G  +     + ++K    ++D     +F  E  +  +L H+N+V+
Sbjct: 13  LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVR 72

Query: 487 LYGVCSKHRPIYIVTD 502
           L G+C +  P Y++ +
Sbjct: 73  LLGLCREAEPHYMILE 88

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 40.1 bits (94), Expect = 0.002
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 10/77 (12%)

Query: 431 LMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTMSED----DFIEEAKVMTRLQH 481
           L  +++LG G FG V   ++    D     VA+       E+    DF  E +++  L H
Sbjct: 6   LKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDH 65

Query: 482 QNLVQLYGVCSK-HRPI 497
           +N+V+  GVC K     
Sbjct: 66  ENIVKYKGVCEKPGGRS 82

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|212820 cd11887, SH3_Bbc1, Src Homology 3 domain of Bbc1 and similar domains

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNGIRKPDQMIRPKVVV 129
           P  V ALYP+++    DL+ + G    V ++    W+  +  D NG  K  + I PK  V
Sbjct: 1   PFKVKALYPYESDHEDDLNFDVGQLITVTEEEDADWYFGEYVDSNGNTK--EGIFPKNFV 58

Query: 130 A 130
            
Sbjct: 59  E 59

This subfamily is composed of Saccharomyces cerevisiae Bbc1p, also called Mti1p (Myosin tail region-interacting protein), and similar proteins. Bbc1p interacts with and regulates type I myosins in yeast, Myo3p and Myo5p, which are involved in actin cytoskeletal reorganization. It also binds and inhibits Las17, a WASp family protein that functions as an activator of the Arp2/3 complex. Bbc1p contains an N-terminal SH3 domain. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 60

>gnl|CDD|212925 cd11992, SH3_Intersectin2_3, Third Src homology 3 domain (or SH3C) of Intersectin-2

 Score = 36.1 bits (83), Expect = 0.002
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 4/52 (7%)

Query: 76  VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNGIRKPDQMIRP 125
           +ALYP+ + E GDL+  +G E  V     E WW   ++D+ GI  P   +RP
Sbjct: 3   IALYPYSSSEPGDLTFNEGEEILVTQKDGE-WWTGSIEDRTGIF-PSNYVRP 52

Intersectin-2 (ITSN2) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN2 also functions as a specific GEF for Cdc42 activation in epithelial morphogenesis, and is required in mitotic spindle orientation. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The third SH3 domain (SH3C) of ITSN2 has been shown to bind the K15 protein of Kaposi's sarcoma-associated herpesvirus. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212950 cd12017, SH3_Tks_3, Third Src homology 3 domain of Tyrosine kinase substrate (Tks) proteins

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)

Query: 134 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           F+A     +S +KG + EV+D     WW VK  +G  G+ PS+Y+++
Sbjct: 8   FQATIQDGISFQKGQKVEVIDKNPSGWWYVK-IDGKEGWAPSSYIEK 53

Tks proteins are Src substrates and scaffolding proteins that play important roles in the formation of podosomes and invadopodia, the dynamic actin-rich structures that are related to cell migration and cancer cell invasion. Vertebrates contain two Tks proteins, Tks4 (Tyr kinase substrate with four SH3 domains) and Tks5 (Tyr kinase substrate with five SH3 domains), which display partially overlapping but non-redundant functions. Both associate with the ADAMs family of transmembrane metalloproteases, which function as sheddases and mediators of cell and matrix interactions. Tks5 interacts with N-WASP and Nck, while Tks4 is essential for the localization of MT1-MMP (membrane-type 1 matrix metalloproteinase) to invadopodia. Tks proteins contain an N-terminal Phox homology (PX) domain and four or five SH3 domains. This model characterizes the third SH3 domain of Tks proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212782 cd11848, SH3_SLAP-like, Src homology 3 domain of Src-Like Adaptor Proteins

 Score = 36.4 bits (84), Expect = 0.002
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKV-KDKNGSVGYIPSNYV 178
            +VAL  + +    +LSL  G    ++ D  + WWKV  +  G   YIPS +V
Sbjct: 1   TLVALGDYPSGGPAELSLRLGEPLTIVSDEGD-WWKVLSEVTGRESYIPSVHV 52

SLAPs are adaptor proteins with limited similarity to Src family tyrosine kinases. They contain an N-terminal SH3 domain followed by an SH2 domain, and a unique C-terminal sequence. They function in regulating the signaling, ubiquitination, and trafficking of T-cell receptor (TCR) and B-cell receptor (BCR) components. Vertebrates contain two SLAPs, named SLAP (or SLA1) and SLAP2 (or SLA2). SLAP has been shown to interact with the EphA receptor, EpoR, Lck, PDGFR, Syk, CD79a, among others, while SLAP2 interacts with CSF1R. Both SLAPs interact with c-Cbl, LAT, CD247, and Zap70. SLAP modulates TCR surface expression levels as well as surface and total BCR levels. As an adaptor to c-Cbl, SLAP increases the ubiquitination, intracellular retention, and targeted degradation of the BCR complex components. SLAP2 plays a role in c-Cbl-dependent regulation of CSF1R, a tyrosine kinase important for myeloid cell growth and differentiation. The SH3 domain of SLAP forms a complex with v-Abl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212772 cd11838, SH3_Intersectin_3, Third Src homology 3 domain (or SH3C) of Intersectin

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 6/54 (11%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGSVGYIPSNYVKE 180
           +ALYP+++ E GDL+   G    V     E WW   + D+    G  PSNYV+ 
Sbjct: 3   IALYPYESNEPGDLTFNAGDVILVTKKDGE-WWTGTIGDRT---GIFPSNYVRP 52

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The third SH3 domain (or SH3C) of ITSN1 has been shown to bind many proteins including dynamin1/2, CIN85, c-Cbl, SHIP2, Reps1, synaptojanin-1, and WNK, among others. The SH3C of ITSN2 has been shown to bind the K15 protein of Kaposi's sarcoma-associated herpesvirus. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|198197 cd09944, SH2_Grb7_family, Src homology 2 (SH2) domain found in the growth factor receptor bound, subclass 7 (Grb7) proteins

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 34/133 (25%)

Query: 257 WYVGDMSRQRAESILKQE-DKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSR 314
           W+ G +SR  A  +++Q+   +G F+VR S +  G + LSL        +KHY I     
Sbjct: 7   WFHGGISRDEAARLIRQQGLVDGVFLVRESQSNPGAFVLSLKH---GQKIKHYQI----- 58

Query: 315 GEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 374
                        IP   + +  F + +  TK    L L        V+ Y   Q + G 
Sbjct: 59  -------------IPIEDEGQWYFTLDDGVTKFYDLLQL--------VEFY---QLNAGS 94

Query: 375 FFLSEKHCCHSIP 387
                KH C  + 
Sbjct: 95  LPTRLKHYCTRVA 107

The Grb family binds to the epidermal growth factor receptor (EGFR, erbB1) via their SH2 domains. There are 3 members of the Grb7 family of proteins: Grb7, Grb10, and Grb14. They are composed of an N-terminal Proline-rich domain, a Ras Associating-like (RA) domain, a Pleckstrin Homology (PH) domain, a phosphotyrosine interaction region (PIR, BPS) and a C-terminal SH2 domain. The SH2 domains of Grb7, Grb10 and Grb14 preferentially bind to a different RTK. Grb7 binds strongly to the erbB2 receptor, unlike Grb10 and Grb14 which bind weakly to it. Grb14 binds to Fibroblast Growth Factor Receptor (FGFR). Grb10 has been shown to interact with many different proteins, including the insulin and IGF1 receptors, platelet-derived growth factor (PDGF) receptor-beta, Ret, Kit, Raf1 and MEK1, and Nedd4. Grb7 family proteins are phosphorylated on serine/threonine as well as tyrosine residues. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|198265 cd10402, SH2_C-SH2_Zap70, C-terminal Src homology 2 (SH2) domain found in Zeta-chain-associated protein kinase 70 (ZAP-70)

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 256 AWYVGDMSRQRAESILKQ-EDKEGCFVVRNSSTKGLYTLSL-YTKVPHPHVKHYHIKQNS 313
            WY G ++R  AE  L      +G F++R     G Y LSL Y K     V HY I Q+ 
Sbjct: 11  PWYHGSIARDEAERRLYSGAQPDGKFLLRERKESGTYALSLVYGKT----VYHYRIDQDK 66

Query: 314 RGEFFLSE 321
            G++ + E
Sbjct: 67  SGKYSIPE 74

ZAP-70 and Syk comprise a family of hematopoietic cell specific protein tyrosine kinases (PTKs) that are required for antigen and antibody receptor function. ZAP-70 is expressed in T and natural killer (NK) cells and Syk is expressed in B cells, mast cells, polymorphonuclear leukocytes, platelets, macrophages, and immature T cells. They are required for the proper development of T and B cells, immune receptors, and activating NK cells. They consist of two N-terminal Src homology 2 (SH2) domains and a C-terminal kinase domain separated from the SH2 domains by a linker or hinge region. Phosphorylation of both tyrosine residues within the Immunoreceptor Tyrosine-based Activation Motifs (ITAM; consensus sequence Yxx[LI]x(7,8)Yxx[LI]) by the Src-family PTKs is required for efficient interaction of ZAP-70 and Syk with the receptor subunits and for receptor function. ZAP-70 forms two phosphotyrosine binding pockets, one of which is shared by both SH2 domains. In Syk the two SH2 domains do not form such a phosphotyrosine-binding site. The SH2 domains here are believed to function independently. In addition, the two SH2 domains of Syk display flexibility in their relative orientation, allowing Syk to accommodate a greater variety of spacing sequences between the ITAM phosphotyrosines and singly phosphorylated non-classical ITAM ligands. This model contains the C-terminus SH2 domains of Zap70. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 105

>gnl|CDD|198224 cd10361, SH2_Fps_family, Src homology 2 (SH2) domain found in feline sarcoma, Fujinami poultry sarcoma, and fes-related (Fes/Fps/Fer) proteins

 Score = 37.1 bits (87), Expect = 0.002
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 11/78 (14%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGL----YTLSLYTKVPHPHVKHYHIKQN 312
           +Y G + R+ AE +LK    +G F+VR +  KG       LS+        ++H+ I ++
Sbjct: 8   YYHGLLPREDAEELLK---NDGDFLVRKTEPKGGGKRKLVLSVRWDG---KIRHFVINRD 61

Query: 313 SRGEFFLSEKHCCHSIPE 330
             G++++ E     SI E
Sbjct: 62  DGGKYYI-EGKSFKSISE 78

The Fps family consists of members Fps/Fes and Fer/Flk/Tyk3. They are cytoplasmic protein-tyrosine kinases implicated in signaling downstream from cytokines, growth factors and immune receptors. Fes/Fps/Fer contains three coiled-coil regions, an SH2 (Src-homology-2) and a TK (tyrosine kinase catalytic) domain signature. Members here include: Fps/Fes, Fer, Kin-31, and In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 90

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 39.5 bits (92), Expect = 0.002
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)

Query: 166 KNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQV---LNYTRFSSKSDVWAYGVLM 222
           K G  G   + Y ++  +   Q +  +  +  EL+ +V   L     + +S+VW+ GV +
Sbjct: 140 KIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTI 199

Query: 223 WEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           WE+F  G  PY  L + +V+    R   L+ PK
Sbjct: 200 WELFELGSQPYRHLSDEQVLTYTVREQQLKLPK 232

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|212902 cd11969, SH3_PLCgamma2, Src homology 3 domain of Phospholipase C (PLC) gamma 2

 Score = 36.0 bits (83), Expect = 0.002
 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVG-YIPSNYVKE 180
           V ALY ++A    +LS  KGA    +      WWK  D  G V  Y PSNYV++
Sbjct: 2   VKALYDYRAKRSDELSFCKGALIHNVSKETGGWWK-GDYGGKVQHYFPSNYVED 54

PLCgamma2 is primarily expressed in haematopoietic cells, specifically in B cells. It is activated by tyrosine phosphorylation by B cell receptor (BCR) kinases and is recruited to the plasma membrane where its substrate is located. It is required in pre-BCR signaling and in the maturation of B cells. PLCs catalyze the hydrolysis of phosphatidylinositol (4,5)-bisphosphate [PtdIns(4,5)P2] to produce Ins(1,4,5)P3 and diacylglycerol (DAG). Ins(1,4,5)P3 initiates the calcium signaling cascade while DAG functions as an activator of PKC. PLCgamma contains a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, two catalytic regions of PLC domains that flank two tandem SH2 domains, followed by a SH3 domain and C2 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)

Query: 4   GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           G LL YL++        V  L ++  QV  GMAYLE  +++HR+
Sbjct: 80  GPLLKYLKKRREI---PVSDLKELAHQVAMGMAYLESKHFVHRD 120

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 4   GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           G L +YL+ ++ +L  ++  L+    Q+   +AYLE   ++HR+
Sbjct: 91  GELRSYLQVNKYSL--DLASLILYSYQLSTALAYLESKRFVHRD 132

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|212859 cd11926, SH3_SH3RF1_3, Third Src Homology 3 domain of SH3 domain containing ring finger 1, an E3 ubiquitin-protein ligase

 Score = 35.7 bits (82), Expect = 0.003
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYV 178
           V VA+YP+   +  +L L KG  + V +  Q+ W+K        +G  P NYV
Sbjct: 1   VYVAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFPGNYV 53

SH3RF1 is also called POSH (Plenty of SH3s) or SH3MD2 (SH3 multiple domains protein 2). It is a scaffold protein that acts as an E3 ubiquitin-protein ligase. It plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF1 also enhances the ubiquitination of ROMK1 potassium channel resulting in its increased endocytosis. It contains an N-terminal RING finger domain and four SH3 domains. This model represents the third SH3 domain, located in the middle, of SH3RF1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212932 cd11999, SH3_PACSIN_like, Src homology 3 domain of an unknown subfamily of proteins with similarity to Protein kinase C and Casein kinase Substrate in Neurons (PACSIN) proteins

 Score = 35.7 bits (82), Expect = 0.003
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEY-EVMDDTQEHW-WKVKDKNGSVGYIPSNYV 178
           V A+Y +   E  +LS + G E  +V D+ ++ W   V D  G+VG  P+NYV
Sbjct: 4   VRAVYDYTGQEPDELSFKAGEELLKVEDEDEQGWCKGVTDG-GAVGLYPANYV 55

PACSINs, also called Synaptic dynamin-associated proteins (Syndapins), act as regulators of cytoskeletal and membrane dynamics. They bind both dynamin and Wiskott-Aldrich syndrome protein (WASP), and may provide direct links between the actin cytoskeletal machinery through WASP and dynamin-dependent endocytosis. Vetebrates harbor three isoforms with distinct expression patterns and specific functions. PACSINs contain an N-terminal F-BAR domain and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212718 cd11784, SH3_SH3RF2_3, Third Src Homology 3 domain of SH3 domain containing ring finger 2

 Score = 35.5 bits (82), Expect = 0.003
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYV 178
           VAL+ + A    +L L+KG    V+   QE W + +    G VG  PSNYV
Sbjct: 3   VALHSYSAHRPEELELQKGEGVRVLGKFQEGWLRGLSLVTGRVGIFPSNYV 53

SH3RF2 is also called POSHER (POSH-eliminating RING protein) or HEPP1 (heart protein phosphatase 1-binding protein). It acts as an anti-apoptotic regulator of the JNK pathway by binding to and promoting the degradation of SH3RF1 (or POSH), a scaffold protein that is required for pro-apoptotic JNK activation. It may also play a role in cardiac functions together with protein phosphatase 1. SH3RF2 contains an N-terminal RING finger domain and three SH3 domains. This model represents the third SH3 domain, located in the middle, of SH3RF2. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212911 cd11978, SH3_VAV3_2, C-terminal (or second) Src homology 3 domain of VAV3 protein

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEV-MDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           + +A Y F A +  +LSL KG   ++    +   WW+  + NG VG+ PS YV+E
Sbjct: 2   IAIARYDFCARDMRELSLLKGDVVKIYTKMSTNGWWR-GEVNGRVGWFPSTYVEE 55

VAV3 is ubiquitously expressed and functions as a phosphorylation-dependent guanine nucleotide exchange factor (GEF) for RhoA, RhoG, and Rac1. It has been implicated to function in the hematopoietic, bone, cerebellar, and cardiovascular systems. VAV3 is essential in axon guidance in neurons that control blood pressure and respiration. It is overexpressed in prostate cancer cells and it plays a role in regulating androgen receptor transcriptional activity. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 6/73 (8%)

Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI------EEAKVMTRLQHQNLVQL 487
           L ++G G +GVV + + R +  +  +K+   SEDD +       E +++ +L+H NLV L
Sbjct: 6   LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNL 65

Query: 488 YGVCSKHRPIYIV 500
             V  + R +++V
Sbjct: 66  IEVFRRKRKLHLV 78

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 39.0 bits (91), Expect = 0.003
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 4   GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           GSL +YL++H   L      LL    Q+CKGM YL    Y+HR+
Sbjct: 92  GSLRDYLQKHRERLDHRK--LLLYASQICKGMEYLGSKRYVHRD 133

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|212939 cd12006, SH3_Fyn_Yrk, Src homology 3 domain of Fyn and Yrk Protein Tyrosine Kinases

 Score = 35.4 bits (81), Expect = 0.004
 Identities = 12/36 (33%), Positives = 24/36 (66%)

Query: 76  VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
           VALY ++A    DLS  KG ++++++ ++  WW+ +
Sbjct: 4   VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEAR 39

Fyn and Yrk (Yes-related kinase) are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|213009 cd12076, SH3_Tks4_2, Second Src homology 3 domain of Tyrosine kinase substrate with four SH3 domains

 Score = 35.4 bits (81), Expect = 0.004
 Identities = 14/36 (38%), Positives = 23/36 (63%)

Query: 76  VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
             +YP+ A +  +++LEKGA  EV+    E WWK++
Sbjct: 4   TVIYPYTARDQDEINLEKGAVVEVIQKNLEGWWKIR 39

Tks4, also called SH3 and PX domain-containing protein 2B (SH3PXD2B) or HOFI, is a Src substrate and scaffolding protein that plays an important role in the formation of podosomes and invadopodia, the dynamic actin-rich structures that are related to cell migration and cancer cell invasion. It is required in the formation of functional podosomes, EGF-induced membrane ruffling, and lamellipodia generation. It plays an important role in cellular attachment and cell spreading. Tks4 is essential for the localization of MT1-MMP (membrane-type 1 matrix metalloproteinase) to invadopodia. It contains an N-terminal Phox homology (PX) domain and four SH3 domains. This model characterizes the second SH3 domain of Tks4. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|198225 cd10362, SH2_Src_Lck, Src homology 2 (SH2) domain in lymphocyte cell kinase (Lck)

 Score = 36.8 bits (85), Expect = 0.004
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 4/74 (5%)

Query: 253 KPKAWYVGDMSRQRAESILKQE-DKEGCFVVRNS-STKGLYTLSLYTKVPHPH--VKHYH 308
           +P+ W+  ++SR  AE  L    +  G F++R S +T G ++LS+     +    VKHY 
Sbjct: 1   EPEPWFFKNLSRNDAERQLLAPGNTHGSFLIRESETTAGSFSLSVRDFDQNQGEVVKHYK 60

Query: 309 IKQNSRGEFFLSEK 322
           I+    G F++S +
Sbjct: 61  IRNLDNGGFYISPR 74

Lck is a member of the Src non-receptor type tyrosine kinase family of proteins. It is expressed in the brain, T-cells, and NK cells. The unique domain of Lck mediates its interaction with two T-cell surface molecules, CD4 and CD8. It associates with their cytoplasmic tails on CD4 T helper cells and CD8 cytotoxic T cells to assist signaling from the T cell receptor (TCR) complex. When the T cell receptor is engaged by the specific antigen presented by MHC, Lck phosphorylase the intracellular chains of the CD3 and zeta-chains of the TCR complex, allowing ZAP-70 to bind them. Lck then phosphorylates and activates ZAP-70, which in turn phosphorylates Linker of Activated T cells (LAT), a transmembrane protein that serves as a docking site for proteins including: Shc-Grb2-SOS, PI3K, and phospholipase C (PLC). The tyrosine phosphorylation cascade culminates in the intracellular mobilization of a calcium ions and activation of important signaling cascades within the lymphocyte, including the Ras-MEK-ERK pathway, which goes on to activate certain transcription factors such as NFAT, NF-kappaB, and AP-1. These transcription factors regulate the production cytokines such as Interleukin-2 that promote long-term proliferation and differentiation of the activated lymphocytes. The N-terminal tail of Lck is myristoylated and palmitoylated and it tethers the protein to the plasma membrane of the cell. Lck also contains a SH3 domain, a SH2 domain, and a C-terminal tyrosine kinase domain. Lck has 2 phosphorylation sites, the first an autophosphorylation site that is linked to activation of the protein and the second which is phosphorylated by Csk, which inhibits it. Lck is also inhibited by SHP-1 dephosphorylation and by Cbl ubiquitin ligase, which is part of the ubiquitin-mediated pathway. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198255 cd10392, SH2_SHF, Src homology 2 domain found in SH2 domain-containing adapter protein F (SHF)

 Score = 36.6 bits (84), Expect = 0.004
 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 6/77 (7%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           WY G +SR  AE++L+   KE  ++VRNS T K  ++LSL +     H+K    K++   
Sbjct: 3   WYHGAISRTDAENLLRL-CKEASYLVRNSETSKNDFSLSLKSSQGFMHMKLSRTKEH--- 58

Query: 316 EFFLSEKHCC-HSIPEV 331
           ++ L +      S+PE+
Sbjct: 59  KYVLGQNSPPFSSVPEI 75

SHF is thought to play a role in PDGF-receptor signaling and regulation of apoptosis. SHF is mainly expressed in skeletal muscle, brain, liver, prostate, testis, ovary, small intestine, and colon. SHF contains four putative tyrosine phosphorylation sites and an SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|212894 cd11961, SH3_Abp1_fungi_C2, Second C-terminal Src homology 3 domain of Fungal Actin-binding protein 1

 Score = 35.2 bits (81), Expect = 0.004
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             ALY + A E  +LS  +  +   ++   + WW + + +GS G  PSNYV+ 
Sbjct: 2   AKALYDYDAAEDNELSFFENDKIINIEFVDDDWW-LGECHGSRGLFPSNYVEL 53

Abp1 is an adaptor protein that functions in receptor-mediated endocytosis and vesicle trafficking. It contains an N-terminal actin-binding module, the actin-depolymerizing factor (ADF) homology domain, a central proline-rich region, and a C-terminal SH3 domain (many yeast Abp1 proteins contain two C-terminal SH3 domains). Yeast Abp1 also contains two acidic domains that bind directly to the Arp2/3 complex, which is required to initiate actin polymerization. The SH3 domain of yeast Abp1 binds and localizes the kinases, Ark1p and Prk1p, which facilitate actin patch disassembly following vesicle internalization. It also mediates the localization to the actin patch of the synaptojanin-like protein, Sjl2p, which plays a key role in endocytosis. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 6/73 (8%)

Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD------FIEEAKVMTRLQHQNLVQL 487
           L  +G G +G+V + K + +  +  +K+   SEDD       + E +++ +L+H+NLV L
Sbjct: 6   LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNL 65

Query: 488 YGVCSKHRPIYIV 500
             V  + + +Y+V
Sbjct: 66  IEVFRRKKRLYLV 78

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 38.8 bits (91), Expect = 0.004
 Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 8/78 (10%)

Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAMMKE---GTMSEDD---FIEEAKVMTRLQHQNLVQ 486
           +LE +G G FG VR+ + +    + + KE   G M+E +    + E  ++  L+H N+V+
Sbjct: 4   VLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVR 63

Query: 487 LYG--VCSKHRPIYIVTD 502
            Y   +   ++ +YIV +
Sbjct: 64  YYDRIIDRSNQTLYIVME 81

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|198221 cd10358, SH2_PTK6_Brk, Src homology 2 domain found in protein-tyrosine kinase-6 (PTK6) which is also known as breast tumor kinase (Brk)

 Score = 36.6 bits (84), Expect = 0.004
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)

Query: 319 LSEKHCCHSIPEVKDKEGCFVVRNSSTKGL-YTLSLYTKVPHPHVKHYHIKQNSRGEFFL 377
           +S       +    +  G F++R S      Y LS+        V+HY I + + G   L
Sbjct: 9   ISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDT---QAVRHYKIWRRAGGRLHL 65

Query: 378 SEKHCCHSIPEVVNYHRHNSGGLASRLKTS-PC 409
           +E     S+PE+VNYHR  S  L+  L+ + PC
Sbjct: 66  NEAVSFLSLPELVNYHRAQS--LSHGLRLAAPC 96

Human protein-tyrosine kinase-6 (PTK6, also known as breast tumor kinase (Brk)) is a member of the non-receptor protein-tyrosine kinase family and is expressed in two-thirds of all breast tumors. PTK6 (9). PTK6 contains a SH3 domain, a SH2 domain, and catalytic domains. For the case of the non-receptor protein-tyrosine kinases, the SH2 domain is typically involved in negative regulation of kinase activity by binding to a phosphorylated tyrosine residue near to the C terminus. The C-terminal sequence of PTK6 (PTSpYENPT where pY is phosphotyrosine) is thought to be a self-ligand for the SH2 domain. The structure of the SH2 domain resembles other SH2 domains except for a centrally located four-stranded antiparallel beta-sheet (strands betaA, betaB, betaC, and betaD). There are also differences in the loop length which might be responsible for PTK6 ligand specificity. There are two possible means of regulation of PTK6: autoinhibitory with the phosphorylation of Tyr playing a role in its negative regulation and autophosphorylation at this site, though it has been shown that PTK6 might phosphorylate signal transduction-associated proteins Sam68 and signal transducing adaptor family member 2 (STAP/BKS) in vivo. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 100

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 8/82 (9%)

Query: 434 LEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQ 486
           +E++G G +GVV +G+ +  G I VAM K    SE++      I E  ++  LQH N+V 
Sbjct: 5   IEKIGEGTYGVVYKGRNKKTGQI-VAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVC 63

Query: 487 LYGVCSKHRPIYIVTDTSSFRL 508
           L  V  +   +Y++ +  S  L
Sbjct: 64  LQDVLMQESRLYLIFEFLSMDL 85

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 39.1 bits (92), Expect = 0.004
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 8/75 (10%)

Query: 433 LLEELGSGQFGVVRRGKWR--GSIDVAM--MKEGTMSEDDFIE--EAKVMTRLQ-HQNLV 485
           ++++LG G FG V   + +  G + VA+  MK+   S ++ +   E K + +L  H N+V
Sbjct: 3   VIKQLGDGTFGSVYLARNKETGEL-VAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIV 61

Query: 486 QLYGVCSKHRPIYIV 500
           +L  V  ++  +Y V
Sbjct: 62  KLKEVFRENDELYFV 76

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|212909 cd11976, SH3_VAV1_2, C-terminal (or second) Src homology 3 domain of VAV1 protein

 Score = 35.3 bits (81), Expect = 0.004
 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)

Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDT-QEHWWKVKDKNGSVGYIPSNYVKE 180
           A Y F A +  +LSL++G   ++++   Q+ WW+  +  G VG+ P+NYV+E
Sbjct: 4   ARYDFCARDRSELSLKEGDIIKILNKKGQQGWWR-GEIYGRVGWFPANYVEE 54

VAV1 is expressed predominantly in the hematopoietic system and it plays an important role in the development and activation of B and T cells. It is activated by tyrosine phosphorylation to function as a guanine nucleotide exchange factor (GEF) for Rho GTPases following cell surface receptor activation, triggering various effects such as cytoskeletal reorganization, transcription regulation, cell cycle progression, and calcium mobilization. It also serves as a scaffold protein and has been shown to interact with Ku70, Socs1, Janus kinase 2, SIAH2, S100B, Abl gene, ZAP-70, SLP76, and Syk, among others. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The C-terminal SH3 domain of Vav1 interacts with a wide variety of proteins including cytoskeletal regulators (zyxin), RNA-binding proteins (Sam68), transcriptional regulators, viral proteins, and dynamin 2. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212994 cd12061, SH3_betaPIX, Src Homology 3 domain of beta-Pak Interactive eXchange factor

 Score = 35.4 bits (81), Expect = 0.004
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           VV A + F+     +LS  KG    V    +  WW+    NG  G+ PSNYV+E
Sbjct: 1   VVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWE-GTHNGRTGWFPSNYVRE 53

Beta-PIX, also called Rho guanine nucleotide exchange factor 7 (ARHGEF7) or Cool (Cloned out of Library)-1, activates small GTPases by exchanging bound GDP for free GTP. It acts as a GEF for both Cdc42 and Rac 1, and plays important roles in regulating neuroendocrine exocytosis, focal adhesion maturation, cell migration, synaptic vesicle localization, and insulin secretion. PIX proteins contain an N-terminal SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains, and a C-terminal leucine-zipper domain for dimerization. The SH3 domain of PIX binds to an atypical PxxxPR motif in p21-activated kinases (PAKs) with high affinity. The binding of PAKs to PIX facilitate the localization of PAKs to focal complexes and also localizes PAKs to PIX targets Cdc43 and Rac, leading to the activation of PAKs. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|198190 cd09937, SH2_csk_like, Src homology 2 (SH2) domain found in Carboxyl-Terminal Src Kinase (Csk)

 Score = 36.5 bits (85), Expect = 0.004
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 5/58 (8%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNS 313
           W+ G +SR+ AE +L Q  ++G F+VR S+   G YTL +        V+HY +   +
Sbjct: 5   WFHGKISREEAERLL-QPPEDGLFLVRESTNYPGDYTLCV---SFEGKVEHYRVIYRN 58

Both the C-terminal Src kinase (CSK) and CSK-homologous kinase (CHK) are members of the CSK-family of protein tyrosine kinases. These proteins suppress activity of Src-family kinases (SFK) by selectively phosphorylating the conserved C-terminal tail regulatory tyrosine by a similar mechanism. CHK is also capable of inhibiting SFKs by a non-catalytic mechanism that involves binding of CHK to SFKs to form stable protein complexes. The unphosphorylated form of SFKs is inhibited by CSK and CHK by a two-step mechanism. The first step involves the formation of a complex of SFKs with CSK/CHK with the SFKs in the complex are inactive. The second step, involves the phosphorylation of the C-terminal tail tyrosine of SFKs, which then dissociates and adopt an inactive conformation. The structural basis of how the phosphorylated SFKs dissociate from CSK/CHK to adopt the inactive conformation is not known. The inactive conformation of SFKs is stabilized by two intramolecular inhibitory interactions: (a) the pYT:SH2 interaction in which the phosphorylated C-terminal tail tyrosine (YT) binds to the SH2 domain, and (b) the linker:SH3 interaction of which the SH2-kinase domain linker binds to the SH3 domain. SFKs are activated by multiple mechanisms including binding of the ligands to the SH2 and SH3 domains to displace the two inhibitory intramolecular interactions, autophosphorylation, and dephosphorylation of YT. By selective phosphorylation and the non-catalytic inhibitory mechanism CSK and CHK are able to inhibit the active forms of SFKs. CSK and CHK are regulated by phosphorylation and inter-domain interactions. They both contain SH3, SH2, and kinase domains separated by the SH3-SH2 connector and SH2 kinase linker, intervening segments separating the three domains. They lack a conserved tyrosine phosphorylation site in the kinase domain and the C-terminal tail regulatory tyrosine phosphorylation site. The CSK SH2 domain is crucial for stabilizing the kinase domain in the active conformation. A disulfide bond here regulates CSK kinase activity. The subcellular localization and activity of CSK are regulated by its SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|212910 cd11977, SH3_VAV2_2, C-terminal (or second) Src homology 3 domain of VAV2 protein

 Score = 35.4 bits (81), Expect = 0.004
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDT--QEHWWKVKDKNGSVGYIPSNYVKEK 181
           VA Y F A +  +LSL +G    +       + WWK  + NG +G+ PS YV+E+
Sbjct: 4   VARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWK-GETNGRIGWFPSTYVEEE 57

VAV2 is widely expressed and functions as a guanine nucleotide exchange factor (GEF) for RhoA, RhoB and RhoG and also activates Rac1 and Cdc42. It is implicated in many cellular and physiological functions including blood pressure control, eye development, neurite outgrowth and branching, EGFR endocytosis and degradation, and cell cluster morphology, among others. It has been reported to associate with Nek3. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	513
KOG0197|consensus	468		100.0
KOG4278|consensus	1157		100.0
KOG0197|consensus	468		99.95
KOG0615|consensus	475		99.93
KOG0598|consensus	357		99.92
KOG0581|consensus	364		99.91
KOG0192|consensus	362		99.91
KOG0595|consensus	429		99.91
KOG0196|consensus	996		99.91
KOG0194|consensus	474		99.9
KOG0198|consensus	313		99.9
KOG0575|consensus	592		99.89
KOG1025|consensus	1177		99.89
KOG0592|consensus	604		99.89
KOG0616|consensus	355		99.89
KOG4721|consensus	904		99.88
KOG0599|consensus	411		99.88
KOG0193|consensus	678		99.88
KOG4226|consensus	379		99.88
KOG1026|consensus	774		99.87
KOG1095|consensus	1025		99.87
KOG0578|consensus	550		99.87
KOG0591|consensus	375		99.86
KOG4278|consensus	1157		99.86
KOG0582|consensus	516		99.86
KOG4257|consensus	974		99.86
KOG0194|consensus	474		99.86
KOG0610|consensus	459		99.86
KOG0605|consensus	550		99.85
KOG0588|consensus	786		99.85
KOG0199|consensus	1039		99.85
KOG0593|consensus	396		99.84
KOG0661|consensus	538		99.83
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.83
KOG0986|consensus	591		99.83
KOG0583|consensus	370		99.83
KOG1187|consensus	361		99.82
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.82
KOG4279|consensus	1226		99.82
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.82
KOG0201|consensus	467		99.81
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.81
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.81
KOG0200|consensus	609		99.81
KOG0694|consensus	694		99.81
KOG0667|consensus	586		99.8
KOG0604|consensus	400		99.8
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.8
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.8
KOG1024|consensus	563		99.8
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.8
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.8
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.8
KOG0584|consensus	632		99.8
KOG0597|consensus	808		99.8
KOG0589|consensus	426		99.8
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.8
KOG0659|consensus	318		99.8
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.8
PTZ00283	496	serine/threonine protein kinase; Provisional	99.8
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.8
KOG0033|consensus	355		99.8
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.8
KOG0600|consensus	560		99.8
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.79
PHA02988	283	hypothetical protein; Provisional	99.79
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.79
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.79
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.79
KOG0660|consensus	359		99.79
KOG0984|consensus	282		99.79
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.79
PTZ00267	478	NIMA-related protein kinase; Provisional	99.79
KOG0594|consensus	323		99.79
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.79
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.79
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.79
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.79
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.79
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.79
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.79
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.79
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.78
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.78
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.78
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.78
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.78
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.78
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.78
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.78
KOG0580|consensus	281		99.78
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.78
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.78
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.78
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.78
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.78
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.78
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.77
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.77
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.77
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.77
KOG0611|consensus	668		99.77
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.77
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.77
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.77
KOG4717|consensus	864		99.77
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.77
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.77
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.77
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.77
KOG1094|consensus	807		99.77
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.77
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.77
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.77
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.77
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.77
KOG0614|consensus	732		99.77
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.77
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.77
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.76
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.76
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.76
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.76
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.76
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.76
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.76
KOG0608|consensus	1034		99.76
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.76
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.76
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.76
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.76
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.76
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.76
KOG0607|consensus	463		99.76
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.76
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.76
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.76
PTZ00284	467	protein kinase; Provisional	99.75
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.75
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.75
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.75
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.75
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.75
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.75
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.75
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.75
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.75
KOG4250|consensus	732		99.75
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.75
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.75
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.75
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.75
KOG0983|consensus	391		99.75
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.75
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.75
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.75
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.75
KOG0663|consensus	419		99.75
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.74
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.74
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.74
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.74
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.74
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.74
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.74
KOG4645|consensus	1509		99.74
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.74
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.74
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.74
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.74
PTZ00036	440	glycogen synthase kinase; Provisional	99.74
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.74
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.74
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.74
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.74
KOG0577|consensus	948		99.74
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.74
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.74
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.74
PHA02882	294	putative serine/threonine kinase; Provisional	99.74
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.74
KOG0603|consensus	612		99.74
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.73
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.73
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.73
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.73
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.73
KOG0585|consensus	576		99.73
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.73
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.73
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.73
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.73
KOG0658|consensus	364		99.73
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.73
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.73
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.73
KOG0696|consensus	683		99.73
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.72
KOG0671|consensus	415		99.72
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.72
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.72
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.72
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.72
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.72
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.72
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.72
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.72
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.72
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.72
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.72
PLN00181	793	protein SPA1-RELATED; Provisional	99.72
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.72
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.72
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.72
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.72
PHA03212	391	serine/threonine kinase US3; Provisional	99.72
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.72
KOG0690|consensus	516		99.71
PHA03209	357	serine/threonine kinase US3; Provisional	99.71
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.71
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.71
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.71
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.71
KOG0612|consensus	1317		99.71
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.71
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.71
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.71
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.71
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.71
KOG0603|consensus	612		99.71
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.71
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.71
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.71
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.71
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.71
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.71
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.71
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.71
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.71
PHA03207	392	serine/threonine kinase US3; Provisional	99.7
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.7
KOG0032|consensus	382		99.7
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.7
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.7
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.7
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.7
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.7
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.7
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.7
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.7
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.7
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.7
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.69
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.69
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.69
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.69
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.69
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.69
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.69
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.69
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.69
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.69
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.69
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.69
KOG0574|consensus	502		99.69
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.69
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.68
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.68
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.68
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.68
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.68
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.68
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.68
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.68
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.68
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.68
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.68
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.68
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.68
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.68
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.68
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.68
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.68
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.68
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.67
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.67
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.67
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.67
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.67
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.67
KOG0579|consensus	1187		99.67
PHA03211	461	serine/threonine kinase US3; Provisional	99.67
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.67
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.67
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.67
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.67
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.67
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.66
KOG0695|consensus	593		99.66
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.66
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.66
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.66
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.66
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.66
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.66
KOG0665|consensus	369		99.66
KOG0586|consensus	596		99.66
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.66
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.66
KOG1989|consensus	738		99.66
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.65
KOG1006|consensus	361		99.65
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.65
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.65
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.65
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.65
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.65
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.65
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.64
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.64
KOG1027|consensus	903		99.64
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.64
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.64
KOG4236|consensus	888		99.64
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.64
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.64
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.64
KOG0669|consensus	376		99.64
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.64
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.64
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.64
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.64
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.64
KOG0596|consensus	677		99.64
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.64
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.64
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.64
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.63
KOG1035|consensus	1351		99.63
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.63
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.63
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.63
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.63
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.63
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.63
KOG2052|consensus	513		99.63
KOG2345|consensus	302		99.63
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.63
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.63
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.62
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.62
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.62
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.62
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.62
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.62
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.62
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.61
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.61
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.61
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.61
PHA03210	501	serine/threonine kinase US3; Provisional	99.61
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.61
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.61
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.61
PLN00009	294	cyclin-dependent kinase A; Provisional	99.61
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.6
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.6
KOG0666|consensus	438		99.6
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.6
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.6
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.59
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.59
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.59
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.59
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.59
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.59
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.59
KOG0664|consensus	449		99.59
KOG0670|consensus	752		99.59
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.58
KOG3653|consensus	534		99.58
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.58
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.58
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.58
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.57
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.57
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.57
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.56
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.56
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.56
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.56
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.55
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.54
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.53
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.53
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.53
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.52
KOG0662|consensus	292		99.51
KOG0595|consensus	429		99.5
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.48
KOG1151|consensus	775		99.44
KOG1345|consensus	378		99.43
KOG1290|consensus	590		99.43
KOG1152|consensus	772		99.4
KOG0192|consensus	362		99.39
KOG0587|consensus	953		99.38
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.37
KOG1167|consensus	418		99.36
KOG0668|consensus	338		99.35
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.35
KOG0615|consensus	475		99.32
KOG0600|consensus	560		99.31
KOG1026|consensus	774		99.31
KOG1187|consensus	361		99.3
KOG1094|consensus	807		99.27
KOG0575|consensus	592		99.24
KOG0196|consensus	996		99.23
KOG0663|consensus	419		99.22
KOG4257|consensus	974		99.21
KOG0605|consensus	550		99.2
KOG1095|consensus	1025		99.2
KOG0591|consensus	375		99.17
KOG0606|consensus	1205		99.16
KOG0581|consensus	364		99.16
KOG0580|consensus	281		99.15
KOG0593|consensus	396		99.15
KOG0597|consensus	808		99.15
KOG0598|consensus	357		99.12
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.12
KOG0195|consensus	448		99.09
KOG0193|consensus	678		99.08
KOG0590|consensus	601		99.07
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.06
KOG0659|consensus	318		99.06
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.06
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.05
KOG0574|consensus	502		99.04
KOG0611|consensus	668		99.04
KOG4721|consensus	904		99.04
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.04
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.04
KOG0661|consensus	538		99.04
KOG0576|consensus	829		99.03
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.02
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.02
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.02
KOG0585|consensus	576		99.02
KOG0032|consensus	382		99.02
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.01
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.01
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	98.99
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	98.99
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	98.99
PTZ00263	329	protein kinase A catalytic subunit; Provisional	98.99
KOG0616|consensus	355		98.99
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.98
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.98
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.97
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	98.97
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	98.97
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.96
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.96
KOG1164|consensus	322		98.96
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	98.96
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.96
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.95
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	98.94
PLN00034	353	mitogen-activated protein kinase kinase; Provision	98.94
KOG0199|consensus	1039		98.94
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.94
KOG0582|consensus	516		98.93
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.93
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.93
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.93
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	98.93
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	98.93
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.92
KOG0577|consensus	948		98.92
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	98.92
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	98.91
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	98.91
KOG0586|consensus	596		98.91
KOG0198|consensus	313		98.91
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	98.9
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.9
KOG0583|consensus	370		98.9
KOG0694|consensus	694		98.9
KOG0610|consensus	459		98.89
smart00252	84	SH2 Src homology 2 domains. Src homology 2 domains	98.89
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.89
PF00017	77	SH2: SH2 domain; InterPro: IPR000980 The Src homol	98.89
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.89
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.88
KOG0201|consensus	467		98.88
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.88
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.88
PTZ00036	440	glycogen synthase kinase; Provisional	98.87
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	98.87
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	98.87
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.87

>KOG0197|consensus

Probab=100.00  E-value=2.1e-34  Score=290.73  Aligned_cols=268  Identities=43%  Similarity=0.785  Sum_probs=223.0

Q ss_pred             CCCCcEEEEeccCCCCCCCCCCCCCCCE-EEEeecCCccceeeecC-CCccccccCCceeeccccccccccCCCCchhhh
Q psy17476        122 MIRPKVVVALYPFKAIEGGDLSLEKGAE-YEVMDDTQEHWWKVKDK-NGSVGYIPSNYVKEKELLGLQKYDDVNGLTLEL  199 (513)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~-~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~  199 (513)
                      ......++++|+|.+....+|.|.+|+. ..+.+.++..||.+++. .+..||+|.|++++..                 
T Consensus         8 ~~~~~~~valyd~~s~~~~dLsf~~Gd~~~~~~~~~~~~Ww~ar~~~~~~~g~ip~N~v~~~~-----------------   70 (468)
T KOG0197|consen    8 PSHETIVVALYDYASRTPEDLSFRKGDVVLILLETTNGDWWRARSLQLGQEGYIPSNYVARNR-----------------   70 (468)
T ss_pred             ccccceEEEeccccCCCccccccccCceEEEeeccCChhHHHHHHhhcCCCCcCcCceeeccc-----------------
Confidence            3445789999999999999999999999 88999999999998887 7889999999987531                 


Q ss_pred             hhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceeccccccccccCCCCCcCCCCCCHHHHHH-HHcCCCCCc
Q psy17476        200 IHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAES-ILKQEDKEG  278 (513)
Q Consensus       200 ~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p~~w~~~~~~R~~aee-LL~~~~~~g  278 (513)
                                                   |..|+....                .++|+++.++|..|++ ++.+.+..|
T Consensus        71 -----------------------------~~~~~~~l~----------------~~~Wf~~~isR~~ae~~ll~p~~~~G  105 (468)
T KOG0197|consen   71 -----------------------------GSPAFIKLS----------------DEPWFFGKISREEAERQLLAPENKEG  105 (468)
T ss_pred             -----------------------------cCCCccccc----------------cCCchhccccHHHHHHhhcCCCCCcc
Confidence                                         222222111                1359999999999995 677788899


Q ss_pred             eEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhccCCcEEEEecCCCCcEEEEEEeee
Q psy17476        279 CFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKV  357 (513)
Q Consensus       279 ~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~~g~~LvR~s~~~~~~~lsv~~~~  357 (513)
                      .|+||++++ +++|++|++......                                                       
T Consensus       106 ~flvR~se~~~g~yslsv~~~~~~~-------------------------------------------------------  130 (468)
T KOG0197|consen  106 AFLVRESESDKGDYSLSVREGDSGG-------------------------------------------------------  130 (468)
T ss_pred             ceeeecccCCcCCeeEEEEeccccC-------------------------------------------------------
Confidence            999999964 999999987632111                                                       


Q ss_pred             CCCccceeEEEEcCCccEE--EecCcccCChhhhhhcccccCCCCccccCcCCCCC---CCCCcccCCCCccccCCcCce
Q psy17476        358 PHPHVKHYHIKQNSRGEFF--LSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR---PVPATAGLSHDKWEIDPAELM  432 (513)
Q Consensus       358 ~~~~v~h~~I~~~~~~~~~--i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  432 (513)
                      ....+.||+|.+..++.++  +.+...|.++++++.||+.++.+++.++.. ++..   ..|+...+..+.|+++++.++
T Consensus       131 ~~~~v~hyri~~~~~~~~~~~~~~~~~F~~l~~lv~~~~~~~~gl~~~l~~-p~~~~~~~~p~~~~~~~d~wei~r~~l~  209 (468)
T KOG0197|consen  131 LGAKVKHYRIRQLDGGGLYPYIDERELFSSLQQLVNYYSKNADGLCTRLRD-PCSKQGHTKPQTPDLARDPWEIPREELK  209 (468)
T ss_pred             CccceeeeeeeEcCCCCeecCCCHHHhhhhHHHHHhhhhccCcchhhcccC-chhccCCCCCCCCccccCCeeecHHHHH
Confidence            1346788888887777666  888899999999999999999999988753 4433   556666677899999999999


Q ss_pred             eEeEecccccceEEEEEEeCceeeE--EeecCCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccCCCC
Q psy17476        433 LLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       433 ~~~~lG~G~fG~V~~g~~~~~~~v~--~~k~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~~~G  507 (513)
                      +.+.||+|.||+|+.|.|++...|+  .+|......++|.+||+||++|+|+|||+|+|+|+.++++|||||||+.|
T Consensus       210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G  286 (468)
T KOG0197|consen  210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG  286 (468)
T ss_pred             HHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence            9999999999999999999875554  56666777899999999999999999999999999999999999999998

>KOG4278|consensus

Probab=100.00  E-value=4.4e-34  Score=289.00  Aligned_cols=260  Identities=34%  Similarity=0.653  Sum_probs=218.6

Q ss_pred             CCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCc-cceeeecCCCccccccCCceeeccccccccccCCCCc
Q psy17476        117 RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE-HWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGL  195 (513)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~  195 (513)
                      -..++.+.+..+|++|||.+.....|++.+||.+.|+-.... +|-.++...|. ||+|.+|+.+...+           
T Consensus        82 la~~sendpNLFVALYDFvasGdntLSitKGeklRvLGYN~NgEWcEartKNGq-GWVPSNyItPvNSL-----------  149 (1157)
T KOG4278|consen   82 LACSSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNKNGEWCEARTKNGQ-GWVPSNYITPVNSL-----------  149 (1157)
T ss_pred             hcccccCCCceeEeeeeeeccccceeeeecCceEEEeeecCCCcceeecccCCC-ccccccccccccch-----------
Confidence            344677888899999999999999999999999999986654 67677776676 99999998764421           


Q ss_pred             hhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceeccccccccccCCCCCcCCCCCCHHHHHHHHcCCC
Q psy17476        196 TLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQED  275 (513)
Q Consensus       196 ~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p~~w~~~~~~R~~aeeLL~~~~  275 (513)
                                                  |.                             ..|||++.+|..++-+|.. +
T Consensus       150 ----------------------------eK-----------------------------hsWYHGpvSRsaaEy~LsS-g  171 (1157)
T KOG4278|consen  150 ----------------------------EK-----------------------------HSWYHGPVSRSAAEYILSS-G  171 (1157)
T ss_pred             ----------------------------hh-----------------------------cccccCccccchhhhhhhc-C
Confidence                                        01                             1299999999999999987 6


Q ss_pred             CCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhccCCcEEEEecCCCCcEEEEEE
Q psy17476        276 KEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLY  354 (513)
Q Consensus       276 ~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~~g~~LvR~s~~~~~~~lsv~  354 (513)
                      -+|.||||++++ .++|++|++.                                                         
T Consensus       172 InGSFLVRESEsSpgQ~sISlRy---------------------------------------------------------  194 (1157)
T KOG4278|consen  172 INGSFLVRESESSPGQYSISLRY---------------------------------------------------------  194 (1157)
T ss_pred             cccceEEeeccCCCcceeEEEEe---------------------------------------------------------
Confidence            789999999975 8999999886                                                         


Q ss_pred             eeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCCCCCCCcc--cCCCCccccCCcCce
Q psy17476        355 TKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATA--GLSHDKWEIDPAELM  432 (513)
Q Consensus       355 ~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  432 (513)
                          .+.|.||+|+.+.+|+.|+.....|.++.+|+.|+....+++.+.+..+......+..-  ....+.|++.+.++.
T Consensus       195 ----eGRVyHYRINt~~dgK~yvt~EsrF~TLaELVHHHStvADGLittLhYPApK~nKptvygvSPn~DkWEmeRtdIt  270 (1157)
T KOG4278|consen  195 ----EGRVYHYRINTDNDGKMYVTQESRFRTLAELVHHHSTVADGLITTLHYPAPKKNKPTVYGVSPNADKWEMERTDIT  270 (1157)
T ss_pred             ----cceEEEEEeeccCCccEEEeehhhhhHHHHHHhhccccccceeEeeeccCccCCCCceeeecCCcchhhccchhee
Confidence                35677888888888888888888999999999999999999998876444333333322  223589999999999


Q ss_pred             eEeEecccccceEEEEEEeCc---eeeEEeecCCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccCCCC
Q psy17476        433 LLEELGSGQFGVVRRGKWRGS---IDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       433 ~~~~lG~G~fG~V~~g~~~~~---~~v~~~k~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~~~G  507 (513)
                      ...+||-|.||.||.|.|++.   +.|.++|...+..++|+.|+.+|+.++|||+|+|+|+|+.+.++|||+|||..|
T Consensus       271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yG  348 (1157)
T KOG4278|consen  271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYG  348 (1157)
T ss_pred             eeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCc
Confidence            999999999999999999874   444466677777899999999999999999999999999999999999999985

>KOG0197|consensus

Probab=99.95  E-value=4.8e-29  Score=252.00  Aligned_cols=162  Identities=38%  Similarity=0.672  Sum_probs=131.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|||.+||+..... -++..+...||.|||+||+||+++++|||||.++||||+.+           ..+||      
T Consensus       283 m~~GsLl~yLr~~~~~-~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~-----------~~vKI------  344 (468)
T KOG0197|consen  283 MPKGSLLDYLRTREGG-LLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDED-----------LVVKI------  344 (468)
T ss_pred             cccCcHHHHhhhcCCC-ccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccC-----------ceEEE------
Confidence            7899999999984333 36778999999999999999999999999999999655555           35577      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +||||++  .+  .++                                      +                   
T Consensus       345 ------sDFGLAr--~~--~d~--------------------------------------~-------------------  357 (468)
T KOG0197|consen  345 ------SDFGLAR--LI--GDD--------------------------------------E-------------------  357 (468)
T ss_pred             ------ccccccc--cc--CCC--------------------------------------c-------------------
Confidence                  9999998  11  000                                      0                   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      +..+    +.+-.                 ||+|    .|||++.+..|+.+|||||||++||||+|+|+.||.++++.+
T Consensus       358 Y~~~----~~~kf-----------------PIkW----tAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e  412 (468)
T KOG0197|consen  358 YTAS----EGGKF-----------------PIKW----TAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE  412 (468)
T ss_pred             eeec----CCCCC-----------------Ccee----cCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH
Confidence            0000    00011                 3444    567788889999999999999999999999999999999999


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +++.|++|+|+|.|            .||...+..||+++.+..
T Consensus       413 v~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~  456 (468)
T KOG0197|consen  413 VLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLRE  456 (468)
T ss_pred             HHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHH
Confidence            99999999999999            599999999999997754

>KOG0615|consensus

Probab=99.93  E-value=3.4e-26  Score=223.47  Aligned_cols=164  Identities=21%  Similarity=0.344  Sum_probs=129.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |+||+|.+++-.++.   +.++.-+.+++|++.|+.|||++||+||||||+|||++.+....        ..||      
T Consensus       258 v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~--------llKI------  320 (475)
T KOG0615|consen  258 VEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDC--------LLKI------  320 (475)
T ss_pred             ecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcce--------EEEe------
Confidence            689999999999873   57888899999999999999999999999999998877764221        2266      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||++|-.                                                 .+|.            
T Consensus       321 ------tDFGlAK~~-------------------------------------------------g~~s------------  333 (475)
T KOG0615|consen  321 ------TDFGLAKVS-------------------------------------------------GEGS------------  333 (475)
T ss_pred             ------cccchhhcc-------------------------------------------------ccce------------
Confidence                  899999810                                                 0000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       -.+.++||++|+|||.++....                       ..+..++|+||+||++|-+++ |.+||+......
T Consensus       334 -fm~TlCGTpsYvAPEVl~~kg~-----------------------~~~~~kVDiWSlGcvLfvcLs-G~pPFS~~~~~~  388 (475)
T KOG0615|consen  334 -FMKTLCGTPSYVAPEVLASKGV-----------------------EYYPSKVDIWSLGCVLFVCLS-GYPPFSEEYTDP  388 (475)
T ss_pred             -ehhhhcCCccccChhheecCCe-----------------------ecccchheeeeccceEEEEec-cCCCcccccCCc
Confidence             1256789999999999887542                       234578999999999999999 999998776655


Q ss_pred             -eccccccccccCCCCCcC---------------CCCCCHHHHHHHHcC
Q psy17476        241 -VVDRVQRGIILEKPKAWY---------------VGDMSRQRAESILKQ  273 (513)
Q Consensus       241 -~~~~i~~~~~~~~p~~w~---------------~~~~~R~~aeeLL~~  273 (513)
                       +.+.|.+|.....|..|.               .+|..|+++.+.|++
T Consensus       389 sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h  437 (475)
T KOG0615|consen  389 SLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH  437 (475)
T ss_pred             cHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence             888999998888886663               566677777777665

>KOG0598|consensus

Probab=99.92  E-value=5.7e-26  Score=220.18  Aligned_cols=143  Identities=21%  Similarity=0.320  Sum_probs=112.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |.||+|+-+|.+.+.   +++++++.|+.+|++||.|||++|||||||||+|||++.+|+  |         ++      
T Consensus       107 ~~GGeLf~hL~~eg~---F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GH--i---------~L------  166 (357)
T KOG0598|consen  107 LNGGELFYHLQREGR---FSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGH--I---------KL------  166 (357)
T ss_pred             cCCccHHHHHHhcCC---cchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCc--E---------EE------
Confidence            679999999999874   589999999999999999999999999999999977777665  2         33      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||||++-..       .                                         .|+            
T Consensus       167 ------tDFgL~k~~~-------~-----------------------------------------~~~------------  180 (357)
T KOG0598|consen  167 ------TDFGLCKEDL-------K-----------------------------------------DGD------------  180 (357)
T ss_pred             ------eccccchhcc-------c-----------------------------------------CCC------------
Confidence                  8999988110       0                                         000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       .....+||..|                          ||||.+...+|+.++|+||+|+++|||++ |.+||...+..+
T Consensus       181 -~t~tfcGT~eY--------------------------mAPEil~~~gy~~~vDWWsLGillYeML~-G~pPF~~~~~~~  232 (357)
T KOG0598|consen  181 -ATRTFCGTPEY--------------------------MAPEILLGKGYDKAVDWWSLGILLYEMLT-GKPPFYAEDVKK  232 (357)
T ss_pred             -ccccccCCccc--------------------------cChHHHhcCCCCcccchHhHHHHHHHHhh-CCCCCcCccHHH
Confidence             01223455444                          55555666689999999999999999999 999999999999


Q ss_pred             eccccccccccCCCCCc
Q psy17476        241 VVDRVQRGIILEKPKAW  257 (513)
Q Consensus       241 ~~~~i~~~~~~~~p~~w  257 (513)
                      +.+.|.++..+..|.-|
T Consensus       233 ~~~~I~~~k~~~~p~~l  249 (357)
T KOG0598|consen  233 MYDKILKGKLPLPPGYL  249 (357)
T ss_pred             HHHHHhcCcCCCCCccC
Confidence            99999888855555433

>KOG0581|consensus

Probab=99.91  E-value=1.1e-25  Score=218.36  Aligned_cols=157  Identities=23%  Similarity=0.303  Sum_probs=122.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh-cceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER-HNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~-~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      |.+|||++++++-+   .+++..+..++++|++||.|||. ++||||||||+|+||+..|           ..||     
T Consensus       160 MDgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG-----------eVKi-----  220 (364)
T KOG0581|consen  160 MDGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG-----------EVKI-----  220 (364)
T ss_pred             cCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC-----------CEEe-----
Confidence            78999999999874   35899999999999999999995 9999999999995555544           5566     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             +|||+++...                                                               
T Consensus       221 -------cDFGVS~~lv---------------------------------------------------------------  230 (364)
T KOG0581|consen  221 -------CDFGVSGILV---------------------------------------------------------------  230 (364)
T ss_pred             -------ccccccHHhh---------------------------------------------------------------
Confidence                   8999887100                                                               


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCC---
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRL---  236 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~---  236 (513)
                              .+   ++-.               +.|+..+|+||+|....|+.++||||||+.++|+.+ |+.||...   
T Consensus       231 --------nS---~a~t---------------fvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~-GrfP~~~~~~~  283 (364)
T KOG0581|consen  231 --------NS---IANT---------------FVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAI-GRFPYPPPNPP  283 (364)
T ss_pred             --------hh---hccc---------------ccccccccChhhhcCCcCCcccceecccHHHHHHhh-CCCCCCCcCCC
Confidence                    00   1111               125555677778888899999999999999999999 99999764   


Q ss_pred             --CcceeccccccccccCCC-------------CCcCCCCCCHHHHHHHHcC
Q psy17476        237 --KNTEVVDRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       237 --~~~~~~~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~  273 (513)
                        +..+++..|..+..+..|             .|...++..|+++++||.+
T Consensus       284 ~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  284 YLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             CCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence              345556666666666555             3677889999999999987

>KOG0192|consensus

Probab=99.91  E-value=1.6e-25  Score=226.35  Aligned_cols=162  Identities=25%  Similarity=0.467  Sum_probs=126.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcc-eeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHN-YIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~-iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      |++|+|.++|++..+. .+++..+..||.|||.||+|||+++ ||||||||+|+|++.+.          ...||     
T Consensus       122 ~~~GsL~~~l~~~~~~-~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~----------~~~KI-----  185 (362)
T KOG0192|consen  122 MPGGSLSVLLHKKRKR-KLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG----------KTLKI-----  185 (362)
T ss_pred             CCCCcHHHHHhhcccC-CCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC----------CEEEE-----
Confidence            7899999999995222 5799999999999999999999999 99999999995555543          24566     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             +|||+++-...+.                                                     .      
T Consensus       186 -------~DFGlsr~~~~~~-----------------------------------------------------~------  199 (362)
T KOG0192|consen  186 -------ADFGLSREKVISK-----------------------------------------------------T------  199 (362)
T ss_pred             -------CCCccceeecccc-----------------------------------------------------c------
Confidence                   9999987100000                                                     0      


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcc--cccccccCccccceeeeeeeeecCCCCCCCCC
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLN--YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK  237 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~  237 (513)
                        ....                          ..|++.|||||++.  ...|+.++||||||+++|||+| |+.||....
T Consensus       200 --~~~~--------------------------~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t-~~~Pf~~~~  250 (362)
T KOG0192|consen  200 --SMTS--------------------------VAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLT-GEIPFEDLA  250 (362)
T ss_pred             --cccC--------------------------CCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHH-CCCCCCCCC
Confidence              0000                          13555666677777  5689999999999999999999 999999988


Q ss_pred             cceecccc-ccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 NTEVVDRV-QRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ~~~~~~~i-~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.++...+ .++.|++.|            .||..++..||.+.+++..
T Consensus       251 ~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~  299 (362)
T KOG0192|consen  251 PVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSR  299 (362)
T ss_pred             HHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHH
Confidence            87776666 577787766            4999999999999998764

>KOG0595|consensus

Probab=99.91  E-value=1.3e-25  Score=219.57  Aligned_cols=142  Identities=22%  Similarity=0.385  Sum_probs=114.3

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .||||.+||++++   .+++.+++.++.|+|.||++||+++||||||||.|||++.+...     +.....||       
T Consensus        92 ~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~-----~~~~~LKI-------  156 (429)
T KOG0595|consen   92 NGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARN-----DTSPVLKI-------  156 (429)
T ss_pred             CCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCC-----CCCceEEe-------
Confidence            5799999999987   47999999999999999999999999999999999777765111     11134466       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           +|||+++-                                                 +                 
T Consensus       157 -----ADFGfAR~-------------------------------------------------L-----------------  165 (429)
T KOG0595|consen  157 -----ADFGFARF-------------------------------------------------L-----------------  165 (429)
T ss_pred             -----cccchhhh-------------------------------------------------C-----------------
Confidence                 88988871                                                 0                 


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                             ..+.++-.               +-|.|++||||++...+|+.|+|+||+|+++|++++ |+.||+..+..|+
T Consensus       166 -------~~~~~a~t---------------lcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~-g~~Pf~a~t~~eL  222 (429)
T KOG0595|consen  166 -------QPGSMAET---------------LCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLT-GKPPFDAETPKEL  222 (429)
T ss_pred             -------CchhHHHH---------------hhCCccccCHHHHHhccccchhhHHHHHHHHHHHHh-CCCCccccCHHHH
Confidence                   01112211               237788899999999999999999999999999999 9999999999999


Q ss_pred             ccccccccccC
Q psy17476        242 VDRVQRGIILE  252 (513)
Q Consensus       242 ~~~i~~~~~~~  252 (513)
                      ...++++....
T Consensus       223 ~~~~~k~~~~~  233 (429)
T KOG0595|consen  223 LLYIKKGNEIV  233 (429)
T ss_pred             HHHHhcccccc
Confidence            98888765543

>KOG0196|consensus

Probab=99.91  E-value=9.1e-26  Score=234.88  Aligned_cols=173  Identities=32%  Similarity=0.591  Sum_probs=141.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |+||+|+.||++++..  +.+-++..|++.||.||.||-.++.|||||.++||||+.+           ..=||      
T Consensus       712 MENGsLDsFLR~~DGq--ftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsn-----------LvCKV------  772 (996)
T KOG0196|consen  712 MENGSLDSFLRQNDGQ--FTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSN-----------LVCKV------  772 (996)
T ss_pred             hhCCcHHHHHhhcCCc--eEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccc-----------eEEEe------
Confidence            8999999999999876  4777999999999999999999999999999999655555           34477      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +||||++                                                          +++++.+..
T Consensus       773 ------sDFGLSR----------------------------------------------------------vledd~~~~  788 (996)
T KOG0196|consen  773 ------SDFGLSR----------------------------------------------------------VLEDDPEAA  788 (996)
T ss_pred             ------cccccee----------------------------------------------------------ecccCCCcc
Confidence                  9999997                                                          121111111


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      +.     ..-|-+|-.                     |.|||.|.+++|+++|||||||++|||.+++|+.||-.+++.+
T Consensus       789 yt-----t~GGKIPiR---------------------WTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd  842 (996)
T KOG0196|consen  789 YT-----TLGGKIPIR---------------------WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD  842 (996)
T ss_pred             cc-----ccCCcccee---------------------ecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH
Confidence            11     112334433                     3568889999999999999999999999999999999999999


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcCCCCCceEEEeecC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQEDKEGCFVVRNSS  286 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~  286 (513)
                      +++.|++|+|+|+|            .||..+...||.+.+++...++    +||...
T Consensus       843 VIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDk----lIrnP~  896 (996)
T KOG0196|consen  843 VIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDK----LIRNPN  896 (996)
T ss_pred             HHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH----HhcCch
Confidence            99999999999999            4899999999999999876555    666553

>KOG0194|consensus

Probab=99.90  E-value=3e-23  Score=213.03  Aligned_cols=186  Identities=30%  Similarity=0.491  Sum_probs=140.3

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCc-eEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGL-YTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~-~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      .+|+||.+.|.+++.+|..   +|.||+|.+.. .+. ...                                       
T Consensus        49 ~~~yHG~l~red~~~lL~~---~GDfLvR~s~~~~~~~~~~---------------------------------------   86 (474)
T KOG0194|consen   49 LPYYHGLLPREDAEKLLKN---DGDFLVRASEPKEGEKREF---------------------------------------   86 (474)
T ss_pred             CccccccccHhHHHHHhCC---CCceEEEeecccCCcceeE---------------------------------------
Confidence            4599999999999999965   77788887753 111 100                                       


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCCCC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRP  412 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~~~  412 (513)
                                      ..+|+... ...++.|+.|....+ .++......|+++.+++.||..+.......-        
T Consensus        87 ----------------~vlSv~~~-~~~~~~h~vi~~~~~-~~~~~~~~~F~si~~li~~~~~~~~~~~~~~--------  140 (474)
T KOG0194|consen   87 ----------------VVLSVKWS-VFKKIKHYVIKRNGN-LFFFEGLRKFPTISELVNYYKFSKLEITGKN--------  140 (474)
T ss_pred             ----------------EEEEEEee-cCCceeEEEEEEcCC-eeEEeccccCCcHHHHHHHHHhcccceeccc--------
Confidence                            02222221 125677999988666 6777888999999999999998865543211        


Q ss_pred             CCCcccCCCCccccCCcCceeEeEecccccceEEEEEEeCce---ee-EEeecCCC----C---HHHHHHHHHHHhcCCC
Q psy17476        413 VPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI---DV-AMMKEGTM----S---EDDFIEEAKVMTRLQH  481 (513)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~---~v-~~~k~~~~----~---~~~f~~E~~il~~l~H  481 (513)
                      .....++.++.|++.++++.+.+.||+|+||.||+|.++...   .. +|+|....    .   ..+|++|+++|++++|
T Consensus       141 ~~L~~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H  220 (474)
T KOG0194|consen  141 FFLKRPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNH  220 (474)
T ss_pred             eeecccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCC
Confidence            123445668899999999999999999999999999987531   12 45553221    1   2579999999999999


Q ss_pred             CceeceeeEEEeCCeeEEEEccCCCCc
Q psy17476        482 QNLVQLYGVCSKHRPIYIVTDTSSFRL  508 (513)
Q Consensus       482 pNIV~l~g~~~~~~~~~lV~E~~~~Gl  508 (513)
                      ||||++||++...+|+|||||||+||-
T Consensus       221 ~NVVr~yGVa~~~~Pl~ivmEl~~gGs  247 (474)
T KOG0194|consen  221 PNVVRFYGVAVLEEPLMLVMELCNGGS  247 (474)
T ss_pred             CCEEEEEEEEcCCCccEEEEEecCCCc
Confidence            999999999999999999999999973

>KOG0198|consensus

Probab=99.90  E-value=3.2e-24  Score=210.92  Aligned_cols=164  Identities=23%  Similarity=0.307  Sum_probs=116.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|||.+++.+.+.  .++++.++.+.+||++||+|||++|||||||||+|||++..          +...|+      
T Consensus        98 ~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~----------~~~~Kl------  159 (313)
T KOG0198|consen   98 APGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS----------NGDVKL------  159 (313)
T ss_pred             cCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC----------CCeEEe------
Confidence            579999999999875  37999999999999999999999999999999999554441          345566      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-...                                                           ...+
T Consensus       160 ------aDFG~a~~~~~-----------------------------------------------------------~~~~  174 (313)
T KOG0198|consen  160 ------ADFGLAKKLES-----------------------------------------------------------KGTK  174 (313)
T ss_pred             ------ccCcccccccc-----------------------------------------------------------cccc
Confidence                  89998761000                                                           0000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccc-cccCccccceeeeeeeeecCCCCCCCC-Cc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRF-SSKSDVWAYGVLMWEVFTCGKMPYGRL-KN  238 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~Dvws~G~~l~el~t~g~~pf~~~-~~  238 (513)
                      |...                         .++.|+|.|||||++.+... ..++||||+||++.||+| |..|+... ..
T Consensus       175 ~~~~-------------------------~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~T-g~~PW~~~~~~  228 (313)
T KOG0198|consen  175 SDSE-------------------------LSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLT-GKPPWSEFFEE  228 (313)
T ss_pred             cccc-------------------------ccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccC-CCCcchhhcch
Confidence            0000                         01346677777777776322 249999999999999999 99999863 32


Q ss_pred             ceecccc-ccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        239 TEVVDRV-QRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       239 ~~~~~~i-~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+.+-.+ .....++.|            .|...++..|++|.+||.+
T Consensus       229 ~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h  276 (313)
T KOG0198|consen  229 AEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH  276 (313)
T ss_pred             HHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence            2222222 233233333            5788999999999999987

>KOG0575|consensus

Probab=99.89  E-value=3e-24  Score=219.65  Aligned_cols=158  Identities=23%  Similarity=0.392  Sum_probs=125.0

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      ++|+|..++++.+   +++|..++.+++||+.||.|||+++|||||||..|           |+++.++..||       
T Consensus       101 ~~~sL~el~Krrk---~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGN-----------lfL~~~~~VKI-------  159 (592)
T KOG0575|consen  101 HRGSLMELLKRRK---PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGN-----------LFLNENMNVKI-------  159 (592)
T ss_pred             CCccHHHHHHhcC---CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhh-----------eeecCcCcEEe-------
Confidence            5789999988654   57999999999999999999999999999999999           77777788899       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           +||||+-                                                          .++++++   
T Consensus       160 -----gDFGLAt----------------------------------------------------------~le~~~E---  173 (592)
T KOG0575|consen  160 -----GDFGLAT----------------------------------------------------------QLEYDGE---  173 (592)
T ss_pred             -----cccceee----------------------------------------------------------eecCccc---
Confidence                 9999985                                                          1111111   


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      +-...+||+-|+                          |||++....++..+||||+||++|-|+. |++||...+-.++
T Consensus       174 rk~TlCGTPNYI--------------------------APEVl~k~gHsfEvDiWSlGcvmYtLL~-G~PPFetk~vket  226 (592)
T KOG0575|consen  174 RKKTLCGTPNYI--------------------------APEVLNKSGHSFEVDIWSLGCVMYTLLV-GRPPFETKTVKET  226 (592)
T ss_pred             ccceecCCCccc--------------------------ChhHhccCCCCCchhhhhhhhHHHhhhh-CCCCcccchHHHH
Confidence            112234555554                          4555666788999999999999999999 9999999999999


Q ss_pred             ccccccccccC-CC----------CCcCCCCCCHHHHHHHHcC
Q psy17476        242 VDRVQRGIILE-KP----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       242 ~~~i~~~~~~~-~p----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.+|....... ..          .-...++..||+++++|.+
T Consensus       227 y~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  227 YNKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             HHHHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            99997654433 22          2356788899999999876

>KOG1025|consensus

Probab=99.89  E-value=2.9e-24  Score=224.49  Aligned_cols=173  Identities=27%  Similarity=0.520  Sum_probs=140.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ||+|+|.||++.++..++  ....+.|+.|||+||.|||.++++||||..+||||..+.+.           ||      
T Consensus       779 mP~G~LlDyvr~hr~~ig--sq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hv-----------ki------  839 (1177)
T KOG1025|consen  779 MPLGCLLDYVREHRDNIG--SQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHV-----------KI------  839 (1177)
T ss_pred             cccchHHHHHHHhhcccc--HHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeE-----------EE------
Confidence            799999999999998764  45889999999999999999999999999999888777643           44      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++++...+                                                              
T Consensus       840 ------tdfgla~ll~~d--------------------------------------------------------------  851 (1177)
T KOG1025|consen  840 ------TDFGLAKLLAPD--------------------------------------------------------------  851 (1177)
T ss_pred             ------EecchhhccCcc--------------------------------------------------------------
Confidence                  889988732111                                                              


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                                   ..||..+          ..+-...|||.|.+....|++++|||||||++||++|.|..||++.+..+
T Consensus       852 -------------~~ey~~~----------~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e  908 (1177)
T KOG1025|consen  852 -------------EKEYSAP----------GGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE  908 (1177)
T ss_pred             -------------ccccccc----------ccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH
Confidence                         1111111          11233567888889999999999999999999999999999999999999


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC----CCCCceEEEe
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ----EDKEGCFVVR  283 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~----~~~~g~fliR  283 (513)
                      |.+.++.|.|++.|            +||..+..+||.++++-..    ....+.|++-
T Consensus       909 I~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqryl~i  967 (1177)
T KOG1025|consen  909 IPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQRYLVI  967 (1177)
T ss_pred             hhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcceEeee
Confidence            99999999999888            5999999999999998653    2234455543

>KOG0592|consensus

Probab=99.89  E-value=2.3e-24  Score=217.21  Aligned_cols=150  Identities=17%  Similarity=0.238  Sum_probs=105.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      .+||+|.++|++.+   .+++..++.++.||+.||+|||++|||||||||+|||++.|+           +.+|      
T Consensus       156 A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dm-----------hikI------  215 (604)
T KOG0592|consen  156 APNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDG-----------HIKI------  215 (604)
T ss_pred             cCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCC-----------cEEE------
Confidence            37999999999986   469999999999999999999999999999999995555554           4455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||-++-     +...+                 ....     ...+...                     .-
T Consensus       216 ------TDFGsAK~-----l~~~~-----------------~~~~-----~~~~~~~---------------------a~  241 (604)
T KOG0592|consen  216 ------TDFGSAKI-----LSPSQ-----------------KSQE-----NPVDPNQ---------------------AS  241 (604)
T ss_pred             ------eecccccc-----CChhh-----------------cccc-----CccCccc---------------------cc
Confidence                  77776651     00000                 0000     0000000                     00


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ...+++.||..||+||+                          +.....+.++|+|||||++|+|++ |.+||...+..-
T Consensus       242 s~~~SFVGTAeYVSPEl--------------------------L~~~~~~~~sDiWAlGCilyQmla-G~PPFra~Neyl  294 (604)
T KOG0592|consen  242 SRRSSFVGTAEYVSPEL--------------------------LNDSPAGPSSDLWALGCILYQMLA-GQPPFRAANEYL  294 (604)
T ss_pred             CcccceeeeecccCHHH--------------------------hcCCCCCcccchHHHHHHHHHHhc-CCCCCccccHHH
Confidence            00123446666666555                          455566999999999999999999 999999999988


Q ss_pred             ecccccccccc
Q psy17476        241 VVDRVQRGIIL  251 (513)
Q Consensus       241 ~~~~i~~~~~~  251 (513)
                      +.++|......
T Consensus       295 iFqkI~~l~y~  305 (604)
T KOG0592|consen  295 IFQKIQALDYE  305 (604)
T ss_pred             HHHHHHHhccc
Confidence            88888765444

>KOG0616|consensus

Probab=99.89  E-value=4.5e-24  Score=200.61  Aligned_cols=135  Identities=21%  Similarity=0.358  Sum_probs=107.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ++||.|..+|++.++   +++..++.+|.||++||+|||+++||+|||||+|||++.+|           ..||      
T Consensus       126 v~GGElFS~Lrk~~r---F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G-----------~iKi------  185 (355)
T KOG0616|consen  126 VPGGELFSYLRKSGR---FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNG-----------HIKI------  185 (355)
T ss_pred             cCCccHHHHHHhcCC---CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCC-----------cEEE------
Confidence            479999999999763   58999999999999999999999999999999995544444           4566      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.               ++                                   |.            
T Consensus       186 ------tDFGFAK~---------------v~-----------------------------------~r------------  197 (355)
T KOG0616|consen  186 ------TDFGFAKR---------------VS-----------------------------------GR------------  197 (355)
T ss_pred             ------EeccceEE---------------ec-----------------------------------Cc------------
Confidence                  88988871               00                                   00            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        ....+||+.|+|||                          .+..++|+.++|+||||+++|||+. |.+||-..++.+
T Consensus       198 --T~TlCGTPeYLAPE--------------------------ii~sk~ynkavDWWalGVLIYEMla-G~pPF~~~~~~~  248 (355)
T KOG0616|consen  198 --TWTLCGTPEYLAPE--------------------------IIQSKGYNKAVDWWALGVLIYEMLA-GYPPFYDDNPIQ  248 (355)
T ss_pred             --EEEecCCccccChH--------------------------HhhcCCCCcchhHHHHHHHHHHHHc-CCCCCcCCChHH
Confidence              11234666665554                          4566789999999999999999999 999999999999


Q ss_pred             eccccccccccC
Q psy17476        241 VVDRVQRGIILE  252 (513)
Q Consensus       241 ~~~~i~~~~~~~  252 (513)
                      +.++|..+.--.
T Consensus       249 iY~KI~~~~v~f  260 (355)
T KOG0616|consen  249 IYEKILEGKVKF  260 (355)
T ss_pred             HHHHHHhCcccC
Confidence            999997765543

>KOG4721|consensus

Probab=99.88  E-value=6.4e-24  Score=214.09  Aligned_cols=159  Identities=26%  Similarity=0.469  Sum_probs=127.2

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      ++|-|...|+...   ++.......|.++||.||+|||.+.|||||||.-||||+.++.           .||       
T Consensus       195 a~GqL~~VLka~~---~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~-----------VKI-------  253 (904)
T KOG4721|consen  195 AQGQLYEVLKAGR---PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDV-----------VKI-------  253 (904)
T ss_pred             ccccHHHHHhccC---ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccce-----------EEe-------
Confidence            5799999999876   4578899999999999999999999999999999988888863           244       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           +|||-++.                                                                 |-
T Consensus       254 -----sDFGTS~e-----------------------------------------------------------------~~  263 (904)
T KOG4721|consen  254 -----SDFGTSKE-----------------------------------------------------------------LS  263 (904)
T ss_pred             -----ccccchHh-----------------------------------------------------------------hh
Confidence                 77876651                                                                 00


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      . .   .|                   .+.+.|+--|||||+|...+.+.|+|||||||+||||+| |..||...+...|
T Consensus       264 ~-~---ST-------------------kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT-~EiPYkdVdssAI  319 (904)
T KOG4721|consen  264 D-K---ST-------------------KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLT-GEIPYKDVDSSAI  319 (904)
T ss_pred             h-h---hh-------------------hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHh-cCCCccccchhee
Confidence            0 0   00                   011334555677777777788999999999999999999 9999999999999


Q ss_pred             ccccc-cccccCCC------------CCcCCCCCCHHHHHHHHcCCC
Q psy17476        242 VDRVQ-RGIILEKP------------KAWYVGDMSRQRAESILKQED  275 (513)
Q Consensus       242 ~~~i~-~~~~~~~p------------~~w~~~~~~R~~aeeLL~~~~  275 (513)
                      +.-|- +...+|.|            .||...+-+||++.++|.+.+
T Consensus       320 IwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld  366 (904)
T KOG4721|consen  320 IWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD  366 (904)
T ss_pred             EEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence            98884 45666666            589999999999999998743

>KOG0599|consensus

Probab=99.88  E-value=6.2e-24  Score=197.31  Aligned_cols=152  Identities=24%  Similarity=0.438  Sum_probs=124.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |+.|.|+|||....   .+++...+.+++|+..|++|||.++||||||||+|           +|+|++.+.++      
T Consensus       105 ~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpEN-----------ILlddn~~i~i------  164 (411)
T KOG0599|consen  105 MPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPEN-----------ILLDDNMNIKI------  164 (411)
T ss_pred             cccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhh-----------eeeccccceEE------
Confidence            78999999999865   67999999999999999999999999999999999           45555556666      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||++.                                                 .+.+|+.+          
T Consensus       165 ------sDFGFa~-------------------------------------------------~l~~GekL----------  179 (411)
T KOG0599|consen  165 ------SDFGFAC-------------------------------------------------QLEPGEKL----------  179 (411)
T ss_pred             ------eccceee-------------------------------------------------ccCCchhH----------
Confidence                  8888876                                                 34455433          


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                         +..+||+||.+||.++      +..|+              +...|+..+|+||.|++||-++. |.+||-.....-
T Consensus       180 ---relCGTPgYLAPEtik------C~m~e--------------~~pGYs~EVD~Wa~GVImyTLLa-GcpPFwHRkQml  235 (411)
T KOG0599|consen  180 ---RELCGTPGYLAPETIK------CSMYE--------------NHPGYSKEVDEWACGVIMYTLLA-GCPPFWHRKQML  235 (411)
T ss_pred             ---HHhcCCCcccChhhee------eeccc--------------CCCCccchhhHHHHHHHHHHHHc-CCCchhHHHHHH
Confidence               6788999999998764      33333              23378999999999999999999 999998777777


Q ss_pred             eccccccccccCCCCCcCCCC
Q psy17476        241 VVDRVQRGIILEKPKAWYVGD  261 (513)
Q Consensus       241 ~~~~i~~~~~~~~p~~w~~~~  261 (513)
                      ++..|.+|+.......|..-.
T Consensus       236 MLR~ImeGkyqF~speWadis  256 (411)
T KOG0599|consen  236 MLRMIMEGKYQFRSPEWADIS  256 (411)
T ss_pred             HHHHHHhcccccCCcchhhcc
Confidence            788888998888887775433

>KOG0193|consensus

Probab=99.88  E-value=9.6e-24  Score=215.12  Aligned_cols=160  Identities=26%  Similarity=0.475  Sum_probs=124.5

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      +|-+|+.|||-.+.++  +.-+.+.||+|||+||.|||.++|||||||..||++..+           ..++|       
T Consensus       470 eGsSLY~hlHv~etkf--dm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~-----------~kVkI-------  529 (678)
T KOG0193|consen  470 EGSSLYTHLHVQETKF--DMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHED-----------LKVKI-------  529 (678)
T ss_pred             cCchhhhhccchhhhh--hHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccC-----------CcEEE-------
Confidence            5678999999977664  666999999999999999999999999999999554443           34455       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           +||||+.-.+                                                               .|
T Consensus       530 -----gDFGLatvk~---------------------------------------------------------------~w  541 (678)
T KOG0193|consen  530 -----GDFGLATVKT---------------------------------------------------------------RW  541 (678)
T ss_pred             -----ecccceeeee---------------------------------------------------------------ee
Confidence                 9999975100                                                               11


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcc---cccccccCccccceeeeeeeeecCCCCCCCCCc
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLN---YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN  238 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~  238 (513)
                      +     |..++--                 ..|+-+|||||+|.   ..+|+.++|||||||++|||+| |..||...+.
T Consensus       542 ~-----g~~q~~q-----------------p~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELlt-g~lPysi~~~  598 (678)
T KOG0193|consen  542 S-----GEQQLEQ-----------------PHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLT-GELPYSIQNR  598 (678)
T ss_pred             c-----cccccCC-----------------CccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHh-CcCCcCCCCh
Confidence            1     2222211                 23555666666665   3689999999999999999999 9999998888


Q ss_pred             ceeccccccccccCCC----------------CCcCCCCCCHHHHHHHHc
Q psy17476        239 TEVVDRVQRGIILEKP----------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       239 ~~~~~~i~~~~~~~~p----------------~~w~~~~~~R~~aeeLL~  272 (513)
                      .+|+.+|-+|+-.+..                .||...+..||.+-+||.
T Consensus       599 dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  599 DQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             hheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            9999999888555444                499999999999999886

>KOG4226|consensus

Probab=99.88  E-value=1e-21  Score=180.28  Aligned_cols=217  Identities=28%  Similarity=0.520  Sum_probs=158.2

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCC--------------CCCCCC-----------------CC
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG--------------IRKPDQ-----------------MI  123 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~-----------------~~  123 (513)
                      .++.|-+.+.+..+++|.+|+.|.+++++.+|||+.+-..+              -+.+++                 ..
T Consensus       110 AvVKf~Y~a~~eDELsLtKGtrv~vmEKssDGWWrG~~ng~VGWFPSNYv~E~~ds~~gd~~s~~~~~~~A~a~n~~~s~  189 (379)
T KOG4226|consen  110 AVVKFNYVAEREDELSLTKGTRVTVMEKSSDGWWRGSYNGQVGWFPSNYVTEEVDSAAGDSPSFLSLRKAASASNGQGSR  189 (379)
T ss_pred             eEEEEeeccccccccccccCcEEEEEEeccCcceecccCCeeccccccceehhccccccCCccceecchhhcccCCCCce
Confidence            78899999999999999999999999999999999886321              000011                 11


Q ss_pred             CCcEEEEeccCCCCCCCCCCCCCCCEEEEeec--CCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhh
Q psy17476        124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDD--TQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIH  201 (513)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (513)
                      .-++++++|.|.+....+|.|++||.++|++.  .+++||++++..|+.|.+|.+|+.....-...    -+++-+.++|
T Consensus       190 vl~vVvaLYsFsssndeELsFeKGerleivd~Pe~DPdWwkarn~~G~vGLVPrNYv~vl~d~~~t----s~~~~~s~~p  265 (379)
T KOG4226|consen  190 VLHVVVALYSFSSSNDEELSFEKGERLEIVDKPENDPDWWKARNARGQVGLVPRNYVVVLSDGPST----SKALHPSHAP  265 (379)
T ss_pred             EEEEEEEEecccCCChhhcccccCceeEeccCCCCCchHHhhcccCCccceeecceEEEeccCccc----cccCCccccc
Confidence            24679999999999999999999999999994  47799999999999999999998754320000    0011111122


Q ss_pred             hhcccccccccCccccceeeeeeeeecCCCCCCCCCcceeccccccccccCCCCCcCCCCCCHHHHHHHHcCCCCCceEE
Q psy17476        202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFV  281 (513)
Q Consensus       202 ~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p~~w~~~~~~R~~aeeLL~~~~~~g~fl  281 (513)
                      .+-                        |.-|-.            .|.  ...++|+.+.++|.+|+.+|+..+.+|.||
T Consensus       266 q~s------------------------gn~p~~------------sg~--~ag~~WYyG~itR~qae~~Ln~hG~eGdFL  307 (379)
T KOG4226|consen  266 QIS------------------------GNGPSS------------SGR--FAGRPWYYGNITRHQAECALNEHGHEGDFL  307 (379)
T ss_pred             ccc------------------------CCCCCc------------ccc--ccCCcceeccccHHHHHHHHhccCccCceE
Confidence            110                        111100            000  123569999999999999999999999999


Q ss_pred             EeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhccCCcEEEEecCCCCcEEEEEEeeeCCC
Q psy17476        282 VRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHP  360 (513)
Q Consensus       282 iR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~~g~~LvR~s~~~~~~~lsv~~~~~~~  360 (513)
                      ||+|++ +++|++|++.                                                             .+
T Consensus       308 iRDSEsnpgD~SvSlka-------------------------------------------------------------~g  326 (379)
T KOG4226|consen  308 IRDSESNPGDFSVSLKA-------------------------------------------------------------SG  326 (379)
T ss_pred             EecCCCCCcceeEEeec-------------------------------------------------------------cC
Confidence            999976 8999999876                                                             13


Q ss_pred             ccceeEEEEcCCccEEEecCcccCChhhhhhccccc
Q psy17476        361 HVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHN  396 (513)
Q Consensus       361 ~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~  396 (513)
                      ..+|+++.. .++ .++...+.|.++.+|++||.+.
T Consensus       327 rNKHFkVq~-~d~-~ycIGqRkF~tmd~Lv~HY~ka  360 (379)
T KOG4226|consen  327 RNKHFKVQL-VDN-VYCIGQRKFHTMDELVEHYKKA  360 (379)
T ss_pred             CCcceEEEE-ecc-eEEeccceeccHHHHHHhhhcC
Confidence            445665533 233 4555678899999999999875

>KOG1026|consensus

Probab=99.87  E-value=2.4e-23  Score=220.65  Aligned_cols=162  Identities=29%  Similarity=0.581  Sum_probs=130.7

Q ss_pred             CCCCcHHHHHHhcCC-----------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCcc
Q psy17476          1 MRHGSLLNYLRRHEN-----------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQM   69 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~   69 (513)
                      |.+|||..||+-+..           +.+|+..+.+.||.|||.||+||-++.+|||||..+|+||+.+           
T Consensus       571 m~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~-----------  639 (774)
T KOG1026|consen  571 MDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN-----------  639 (774)
T ss_pred             cccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc-----------
Confidence            789999999998532           2237788999999999999999999999999999999555554           


Q ss_pred             CCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCE
Q psy17476         70 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAE  149 (513)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  149 (513)
                      ..+||            +||||++.                                                       
T Consensus       640 l~VKI------------sDfGLsRd-------------------------------------------------------  652 (774)
T KOG1026|consen  640 LVVKI------------SDFGLSRD-------------------------------------------------------  652 (774)
T ss_pred             eEEEe------------cccccchh-------------------------------------------------------
Confidence            45577            99999981                                                       


Q ss_pred             EEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecC
Q psy17476        150 YEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCG  229 (513)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g  229 (513)
                           -...++++.    +...++|.                     =||+||.|.+..|+++||||||||+|||++|+|
T Consensus       653 -----iYssDYYk~----~~~t~lPI---------------------RWMppEsIly~kFTteSDVWs~GVvLWEIFsyG  702 (774)
T KOG1026|consen  653 -----IYSSDYYKV----RGNTLLPI---------------------RWMPPESILYGKFTTESDVWSFGVVLWEIFSYG  702 (774)
T ss_pred             -----hhhhhhhcc----cCCceeee---------------------ecCCHHHhhcCcccchhhhhhhhhhhhhhhccc
Confidence                 001111111    11112221                     147788899999999999999999999999999


Q ss_pred             CCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHH
Q psy17476        230 KMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESI  270 (513)
Q Consensus       230 ~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeL  270 (513)
                      +.||-+..++|+++.|++|.-++.|            .||...+..||++.++
T Consensus       703 ~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI  755 (774)
T KOG1026|consen  703 KQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEI  755 (774)
T ss_pred             cCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence            9999999999999999999888888            5899999999999886

>KOG1095|consensus

Probab=99.87  E-value=2.4e-23  Score=228.08  Aligned_cols=165  Identities=32%  Similarity=0.531  Sum_probs=131.2

Q ss_pred             CCCCcHHHHHHhcCC----CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEE
Q psy17476          1 MRHGSLLNYLRRHEN----TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVV   76 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~----~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~   76 (513)
                      |+||||..||++.+.    ...+....+..+|.|||+|++||+++++|||||.++|           .|++....+||  
T Consensus       777 M~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRN-----------CLL~~~r~VKI--  843 (1025)
T KOG1095|consen  777 MEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARN-----------CLLDERRVVKI--  843 (1025)
T ss_pred             cccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhh-----------eeecccCcEEE--
Confidence            899999999999621    2246888999999999999999999999999999999           33444456777  


Q ss_pred             EeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecC
Q psy17476         77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT  156 (513)
Q Consensus        77 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  156 (513)
                                +||||++. ..                                                           
T Consensus       844 ----------aDFGlArD-iy-----------------------------------------------------------  853 (1025)
T KOG1095|consen  844 ----------ADFGLARD-IY-----------------------------------------------------------  853 (1025)
T ss_pred             ----------cccchhHh-hh-----------------------------------------------------------
Confidence                      99999981 00                                                           


Q ss_pred             CccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCC
Q psy17476        157 QEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRL  236 (513)
Q Consensus       157 ~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~  236 (513)
                                       ..+|++....    .-.||+|    |+||.+....|++++|||||||++||++|.|..||...
T Consensus       854 -----------------~~~yyr~~~~----a~lPvkW----m~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~  908 (1025)
T KOG1095|consen  854 -----------------DKDYYRKHGE----AMLPVKW----MPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR  908 (1025)
T ss_pred             -----------------hchheeccCc----cccceec----CCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc
Confidence                             0111111110    0113444    55666777899999999999999999999999999999


Q ss_pred             CcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        237 KNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       237 ~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++.+++..+.++.|++.|            .||.+.+..||++..++..
T Consensus       909 ~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q  957 (1025)
T KOG1095|consen  909 SNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQ  957 (1025)
T ss_pred             chHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhh
Confidence            999999988777799888            5999999999999999985

>KOG0578|consensus

Probab=99.87  E-value=3.2e-23  Score=210.49  Aligned_cols=158  Identities=19%  Similarity=0.342  Sum_probs=125.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |+||+|.|.+....    +++.++..|++++++||+|||.++|||||||.+|||...+|           +.|+      
T Consensus       352 m~ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g-----------~vKl------  410 (550)
T KOG0578|consen  352 MEGGSLTDVVTKTR----MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDG-----------SVKL------  410 (550)
T ss_pred             cCCCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCC-----------cEEE------
Confidence            78999999998864    68999999999999999999999999999999995444443           4455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||++.-                                                                  
T Consensus       411 ------tDFGFcaq------------------------------------------------------------------  418 (550)
T KOG0578|consen  411 ------TDFGFCAQ------------------------------------------------------------------  418 (550)
T ss_pred             ------eeeeeeec------------------------------------------------------------------
Confidence                  67776540                                                                  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                                  +.++..++..         .=|+|-|||||++..+.|+.++||||||++++||+- |++||-..++..
T Consensus       419 ------------i~~~~~KR~T---------mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMve-GEPPYlnE~Plr  476 (550)
T KOG0578|consen  419 ------------ISEEQSKRST---------MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVE-GEPPYLNENPLR  476 (550)
T ss_pred             ------------cccccCcccc---------ccCCCCccchhhhhhcccCccccchhhhhHHHHHhc-CCCCccCCChHH
Confidence                        0000000000         126788888999999999999999999999999999 999999888888


Q ss_pred             eccccccccccCCC--------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP--------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p--------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+.+|....++...              +|...+...|+.|.+||.+
T Consensus       477 AlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  477 ALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             HHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            88888766555444              5888999999999999987

>KOG0591|consensus

Probab=99.86  E-value=4.4e-23  Score=192.56  Aligned_cols=141  Identities=18%  Similarity=0.288  Sum_probs=111.7

Q ss_pred             CCCcHHHHHHhcC--CCCCCchhHHHHHHHHHHHHHHHHHh--cc--eeccccCcccccccCccccccccCCccCCCceE
Q psy17476          2 RHGSLLNYLRRHE--NTLGGNVGLLLDMCIQVCKGMAYLER--HN--YIHRETKKSLYPSSLNEISFILWPDQMIRPKVV   75 (513)
Q Consensus         2 ~~g~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~gl~ylH~--~~--iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~   75 (513)
                      .+|||.+.+++-+  ++ -+++..++.++.|++.||..+|+  .+  |+||||||.||+++.+|           .+|+ 
T Consensus       103 ~~GDLsqmIk~~K~qkr-~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~g-----------vvKL-  169 (375)
T KOG0591|consen  103 DAGDLSQMIKHFKKQKR-LIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANG-----------VVKL-  169 (375)
T ss_pred             cccCHHHHHHHHHhccc-cCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCC-----------ceee-
Confidence            4799999998832  23 26999999999999999999999  45  99999999997666665           3455 


Q ss_pred             EEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeec
Q psy17476         76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDD  155 (513)
Q Consensus        76 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  155 (513)
                                 +||||++--                                                            
T Consensus       170 -----------GDfGL~r~l------------------------------------------------------------  178 (375)
T KOG0591|consen  170 -----------GDFGLGRFL------------------------------------------------------------  178 (375)
T ss_pred             -----------ccchhHhHh------------------------------------------------------------
Confidence                       999998710                                                            


Q ss_pred             CCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCC
Q psy17476        156 TQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGR  235 (513)
Q Consensus       156 ~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~  235 (513)
                                  .+....+-.++               |+|-+|+||.|...+|+.+|||||+||++|||++ -+.||.+
T Consensus       179 ------------~s~~tfA~S~V---------------GTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMca-L~~PF~g  230 (375)
T KOG0591|consen  179 ------------SSKTTFAHSLV---------------GTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCA-LQSPFYG  230 (375)
T ss_pred             ------------cchhHHHHhhc---------------CCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHh-cCCCccc
Confidence                        00001111121               4555577777888899999999999999999999 9999999


Q ss_pred             CCcceeccccccccccCCC
Q psy17476        236 LKNTEVVDRVQRGIILEKP  254 (513)
Q Consensus       236 ~~~~~~~~~i~~~~~~~~p  254 (513)
                      .+-.++..+|.+|..+|.|
T Consensus       231 ~n~~~L~~KI~qgd~~~~p  249 (375)
T KOG0591|consen  231 DNLLSLCKKIEQGDYPPLP  249 (375)
T ss_pred             ccHHHHHHHHHcCCCCCCc
Confidence            9989999999999888777

>KOG4278|consensus

Probab=99.86  E-value=4.8e-23  Score=209.38  Aligned_cols=160  Identities=34%  Similarity=0.581  Sum_probs=130.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|++||++..+. -++.-.+..||.||+.||+||..+++|||||.++|.||..+.+.           ||      
T Consensus       345 M~yGNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiV-----------Kv------  406 (1157)
T KOG4278|consen  345 MCYGNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIV-----------KV------  406 (1157)
T ss_pred             ccCccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceE-----------Ee------
Confidence            8899999999997655 36767889999999999999999999999999999888887642           44      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||||++                                                  |-+||+++--       
T Consensus       407 ------ADFGLsR--------------------------------------------------lMtgDTYTAH-------  423 (1157)
T KOG4278|consen  407 ------ADFGLSR--------------------------------------------------LMTGDTYTAH-------  423 (1157)
T ss_pred             ------eccchhh--------------------------------------------------hhcCCceecc-------
Confidence                  8999998                                                  1122222100       


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                            .|.  -+                 ||+|    .|||.+.++.|+.++|||+||++|||+.|+|..||++.+..+
T Consensus       424 ------AGA--KF-----------------PIKW----TAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq  474 (1157)
T KOG4278|consen  424 ------AGA--KF-----------------PIKW----TAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ  474 (1157)
T ss_pred             ------cCc--cC-----------------cccc----cCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH
Confidence                  000  01                 2344    467889999999999999999999999999999999999999


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHH
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESI  270 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeL  270 (513)
                      ++..+++++|...|            .||...+..||++.++
T Consensus       475 VY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaei  516 (1157)
T KOG4278|consen  475 VYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEI  516 (1157)
T ss_pred             HHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence            99999999998877            4899999999988776

>KOG0582|consensus

Probab=99.86  E-value=2e-22  Score=198.92  Aligned_cols=165  Identities=21%  Similarity=0.320  Sum_probs=122.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |.+||+.+.|+..-.. ++++..+..|++++++||.|||.+|-||||||+.||||+.+|.           .++      
T Consensus       106 Ma~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~-----------VkL------  167 (516)
T KOG0582|consen  106 MAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGT-----------VKL------  167 (516)
T ss_pred             hcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCc-----------EEE------
Confidence            7899999999997655 6899999999999999999999999999999999977777763           233      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||++-.                                    +            |.-|+....        
T Consensus       168 ------adFgvsa~------------------------------------l------------~~~G~R~~~--------  185 (516)
T KOG0582|consen  168 ------ADFGVSAS------------------------------------L------------FDSGDRQVT--------  185 (516)
T ss_pred             ------cCceeeee------------------------------------e------------cccCceeeE--------
Confidence                  67765430                                    0            000000000        


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc--ccccccCccccceeeeeeeeecCCCCCCCCCc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY--TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN  238 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~  238 (513)
                         +       +   +              -+-|+|+|||||++..  ..|+.|+||||||++..|+.+ |..||....+
T Consensus       186 ---r-------f---~--------------tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~-G~aPf~k~pP  237 (516)
T KOG0582|consen  186 ---R-------F---N--------------TFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAH-GHAPFSKYPP  237 (516)
T ss_pred             ---e-------e---c--------------cccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhc-CCCCcccCCh
Confidence               0       0   0              1235677777777443  469999999999999999999 9999999998


Q ss_pred             ceecccccccccc-----CCC----------------CCcCCCCCCHHHHHHHHcC
Q psy17476        239 TEVVDRVQRGIIL-----EKP----------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       239 ~~~~~~i~~~~~~-----~~p----------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+++-.-.++..+     ..+                .|...++..||.|.+||++
T Consensus       238 mkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  238 MKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             HHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence            7765444444333     111                4788999999999999987

>KOG4257|consensus

Probab=99.86  E-value=8.7e-23  Score=207.83  Aligned_cols=160  Identities=30%  Similarity=0.613  Sum_probs=133.3

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      +.|.|+.||+.+++.+  +..++..++.||+.||+|||+.++|||||..+||||+.+           -++|+       
T Consensus       473 ~~GELr~yLq~nk~sL--~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp-----------~CVKL-------  532 (974)
T KOG4257|consen  473 PLGELREYLQQNKDSL--PLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSP-----------QCVKL-------  532 (974)
T ss_pred             cchhHHHHHHhccccc--hHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCc-----------ceeee-------
Confidence            5799999999998875  777999999999999999999999999999999665555           35677       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           +||||++.     +                                                       +++..+
T Consensus       533 -----aDFGLSR~-----~-------------------------------------------------------ed~~yY  547 (974)
T KOG4257|consen  533 -----ADFGLSRY-----L-------------------------------------------------------EDDAYY  547 (974)
T ss_pred             -----cccchhhh-----c-------------------------------------------------------cccchh
Confidence                 99999981     1                                                       111112


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      ++     +.|-.|                 |+    ||+||.|++++|+.++|||-||+.+||+++.|..||.+-.+.++
T Consensus       548 ka-----S~~kLP-----------------IK----WmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV  601 (974)
T KOG4257|consen  548 KA-----SRGKLP-----------------IK----WMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV  601 (974)
T ss_pred             hc-----cccccc-----------------ee----ecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce
Confidence            21     122222                 33    47899999999999999999999999999999999999999999


Q ss_pred             ccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        242 VDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       242 ~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +-.|++|.|+|.|            +||..++..||.+.++-.
T Consensus       602 I~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~  644 (974)
T KOG4257|consen  602 IGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA  644 (974)
T ss_pred             EEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence            9999999999988            689999999999988643

>KOG0194|consensus

Probab=99.86  E-value=3.9e-22  Score=204.85  Aligned_cols=160  Identities=31%  Similarity=0.542  Sum_probs=129.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ++||+|.+||+++...  ++..+...++.|+|+||+|||++++|||||.++|+|++.+++           +||      
T Consensus       243 ~~gGsL~~~L~k~~~~--v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~-----------vKI------  303 (474)
T KOG0194|consen  243 CNGGSLDDYLKKNKKS--LPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGV-----------VKI------  303 (474)
T ss_pred             cCCCcHHHHHHhCCCC--CCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCe-----------EEe------
Confidence            5799999999998864  577799999999999999999999999999999977666653           466      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +||||++......+.                                                           
T Consensus       304 ------SDFGLs~~~~~~~~~-----------------------------------------------------------  318 (474)
T KOG0194|consen  304 ------SDFGLSRAGSQYVMK-----------------------------------------------------------  318 (474)
T ss_pred             ------CccccccCCcceeec-----------------------------------------------------------
Confidence                  999998732211000                                                           


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                             ...--+|                 |.|    +|||.+...-|+.++|||||||++||+++.|..||.+..+.+
T Consensus       319 -------~~~~klP-----------------irW----LAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~  370 (474)
T KOG0194|consen  319 -------KFLKKLP-----------------IRW----LAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE  370 (474)
T ss_pred             -------cccccCc-----------------cee----cChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH
Confidence                   0000122                 233    458888888999999999999999999998999999999999


Q ss_pred             ecccc-ccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRV-QRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i-~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...| ..+++.+.|            +||..++..|+.+.++..
T Consensus       371 v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  371 VKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             HHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence            99999 778888777            589999999999888755

>KOG0610|consensus

Probab=99.86  E-value=7.7e-22  Score=193.35  Aligned_cols=63  Identities=14%  Similarity=0.097  Sum_probs=56.8

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +||+|...+++...+ -+++..++.|+.+|+.||+|||..|||+|||||+||||..+|+  |+|.|
T Consensus       160 pGGdL~~LrqkQp~~-~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGH--IMLsD  222 (459)
T KOG0610|consen  160 PGGDLHSLRQKQPGK-RFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGH--IMLSD  222 (459)
T ss_pred             CCccHHHHHhhCCCC-ccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCc--EEeee
Confidence            799999999986655 3799999999999999999999999999999999999999997  66644

>KOG0605|consensus

Probab=99.85  E-value=1.5e-22  Score=204.22  Aligned_cols=180  Identities=15%  Similarity=0.196  Sum_probs=114.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +||||+..+|.+.+   .|+++.++.++.+++.|++-||++|+|||||||+|+||+..|           ..|+      
T Consensus       223 lPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~G-----------HiKL------  282 (550)
T KOG0605|consen  223 LPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKG-----------HIKL------  282 (550)
T ss_pred             cCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCC-----------CEee------
Confidence            58999999999987   689999999999999999999999999999999995555555           4455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +||||+.|..-....+-..---+++.....+                    .+.++.......-.........-
T Consensus       283 ------SDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~  336 (550)
T KOG0605|consen  283 ------SDFGLSTGLDKKHRIESYRLDEQMQINLSEA--------------------KPSDFPKFNTPRSTMSRREQLQT  336 (550)
T ss_pred             ------ccccccchhhhhhhhhhhcchhhhhhhhccC--------------------CCccccccccccchhhHHHHHHH
Confidence                  8999997532110000000000000000000                    00000000000000000000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      |+..     ..-.+               ..+-|+|-+||||++..++|+..+|+||+||++|||+. |-+||...++.+
T Consensus       337 w~~n-----rr~~a---------------~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLv-GyPPF~s~tp~~  395 (550)
T KOG0605|consen  337 WKRN-----RRQLA---------------YSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLV-GYPPFCSETPQE  395 (550)
T ss_pred             HHhh-----hhhhh---------------hcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence            1000     00000               12348888999999999999999999999999999999 999999999999


Q ss_pred             ecccccc
Q psy17476        241 VVDRVQR  247 (513)
Q Consensus       241 ~~~~i~~  247 (513)
                      ++.+|..
T Consensus       396 T~rkI~n  402 (550)
T KOG0605|consen  396 TYRKIVN  402 (550)
T ss_pred             HHHHHHH
Confidence            9988853

>KOG0588|consensus

Probab=99.85  E-value=4.1e-22  Score=205.00  Aligned_cols=160  Identities=26%  Similarity=0.401  Sum_probs=128.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|.|++||.+++   ++++..+..+++||+.|+.|+|..+|+|||+||+|           ||+|...+-||      
T Consensus        94 v~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpEN-----------lLLd~~~nIKI------  153 (786)
T KOG0588|consen   94 VPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPEN-----------LLLDVKNNIKI------  153 (786)
T ss_pred             cCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchh-----------hhhhcccCEee------
Confidence            68999999999987   57899999999999999999999999999999999           55555545566      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||++.-+                                                  .++.+          
T Consensus       154 ------ADFGMAsLe--------------------------------------------------~~gkl----------  167 (786)
T KOG0588|consen  154 ------ADFGMASLE--------------------------------------------------VPGKL----------  167 (786)
T ss_pred             ------eccceeecc--------------------------------------------------cCCcc----------
Confidence                  899987611                                                  11110          


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        -.+.||++.|.+||.+..      ++|+                   +.++||||.|+++|.++| |+.||++.+...
T Consensus       168 --LeTSCGSPHYA~PEIV~G------~pYd-------------------G~~sDVWSCGVILfALLt-G~LPFdDdNir~  219 (786)
T KOG0588|consen  168 --LETSCGSPHYAAPEIVSG------RPYD-------------------GRPSDVWSCGVILFALLT-GKLPFDDDNIRV  219 (786)
T ss_pred             --ccccCCCcccCCchhhcC------CCCC-------------------CCccccchhHHHHHHHHh-CCCCCCCccHHH
Confidence              123569999999988754      4566                   889999999999999999 999999988899


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHHHHHHHHcCC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQRAESILKQE  274 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~~aeeLL~~~  274 (513)
                      ++.+|.+|....+-           +....++..|...++++++.
T Consensus       220 LLlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP  264 (786)
T KOG0588|consen  220 LLLKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP  264 (786)
T ss_pred             HHHHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence            99999887554322           23567788888888888873

>KOG0199|consensus

Probab=99.85  E-value=1.2e-21  Score=201.94  Aligned_cols=161  Identities=27%  Similarity=0.427  Sum_probs=128.4

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      +.|||++.|++-. .-.+....+..||.|||.||.||.++++|||||..+|+|+-.           .-..||       
T Consensus       193 plGSLldrLrka~-~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas-----------prtVKI-------  253 (1039)
T KOG0199|consen  193 PLGSLLDRLRKAK-KAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS-----------PRTVKI-------  253 (1039)
T ss_pred             ccchHHHHHhhcc-ccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc-----------cceeee-------
Confidence            6799999999922 224678899999999999999999999999999999943333           333466       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           +||||.+-                                                 +..+              
T Consensus       254 -----~DFGLmRa-------------------------------------------------Lg~n--------------  265 (1039)
T KOG0199|consen  254 -----CDFGLMRA-------------------------------------------------LGEN--------------  265 (1039)
T ss_pred             -----ecccceec-------------------------------------------------cCCC--------------
Confidence                 89999871                                                 0011              


Q ss_pred             eeecCCCcccc-ccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        162 KVKDKNGSVGY-IPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       162 ~~~~~~g~~g~-~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                             .-.| |.+..           .-|+    -|||||+|....|++++|+|+|||++|||+|+|+.|+.+....+
T Consensus       266 -------ed~Yvm~p~r-----------kvPf----AWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q  323 (1039)
T KOG0199|consen  266 -------EDMYVMAPQR-----------KVPF----AWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ  323 (1039)
T ss_pred             -------CcceEecCCC-----------cCcc----cccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH
Confidence                   1111 22211           0012    36889999999999999999999999999999999999999999


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHH
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESIL  271 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL  271 (513)
                      |+++|..+.+++.|            .||.+.+-.|+.+-.|.
T Consensus       324 IL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair  366 (1039)
T KOG0199|consen  324 ILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIR  366 (1039)
T ss_pred             HHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHH
Confidence            99999999999988            58999999999988774

>KOG0593|consensus

Probab=99.84  E-value=6.5e-22  Score=186.56  Aligned_cols=156  Identities=22%  Similarity=0.387  Sum_probs=115.2

Q ss_pred             cHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccccc
Q psy17476          5 SLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAI   84 (513)
Q Consensus         5 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   84 (513)
                      ++.+-|.++.+  |++.+.++.++.|++.|+.|+|++++|||||||+||||+.+|+.           |+          
T Consensus        86 TvL~eLe~~p~--G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvv-----------KL----------  142 (396)
T KOG0593|consen   86 TVLHELERYPN--GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVV-----------KL----------  142 (396)
T ss_pred             HHHHHHHhccC--CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcE-----------Ee----------
Confidence            34455555544  57999999999999999999999999999999999888888742           34          


Q ss_pred             CCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeee
Q psy17476         85 EGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK  164 (513)
Q Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  164 (513)
                        +|||+++...                                                .+|+.               
T Consensus       143 --CDFGFAR~L~------------------------------------------------~pgd~---------------  157 (396)
T KOG0593|consen  143 --CDFGFARTLS------------------------------------------------APGDN---------------  157 (396)
T ss_pred             --ccchhhHhhc------------------------------------------------CCcch---------------
Confidence              7888877100                                                01111               


Q ss_pred             cCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc-ccccccCccccceeeeeeeeecCCCCCCCCCcceecc
Q psy17476        165 DKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY-TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVD  243 (513)
Q Consensus       165 ~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~  243 (513)
                          -..|++..|++                    |||.+.. .+|+..+||||+||++.||++ |.+.|++.+..+.+.
T Consensus       158 ----YTDYVATRWYR--------------------aPELLvGDtqYG~pVDiWAiGCv~aEl~~-G~pL~PG~SDiDQLy  212 (396)
T KOG0593|consen  158 ----YTDYVATRWYR--------------------APELLVGDTQYGKPVDIWAIGCVFAELLT-GEPLWPGRSDIDQLY  212 (396)
T ss_pred             ----hhhhhhhhhcc--------------------ChhhhcccCcCCCcccchhhhHHHHHHhc-CCcCCCCcchHHHHH
Confidence                12345544443                    3444444 789999999999999999999 999999988877666


Q ss_pred             ccc--------------------cccccCCC----------------------CCcCCCCCCHHHHHHHHcC
Q psy17476        244 RVQ--------------------RGIILEKP----------------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       244 ~i~--------------------~~~~~~~p----------------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .|+                    .|.++|.|                      .|...++..|...+++|.+
T Consensus       213 ~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H  284 (396)
T KOG0593|consen  213 LIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH  284 (396)
T ss_pred             HHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence            554                    34444444                      3677888899999988876

>KOG0661|consensus

Probab=99.83  E-value=8.5e-22  Score=195.90  Aligned_cols=129  Identities=20%  Similarity=0.364  Sum_probs=98.8

Q ss_pred             CcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccccc
Q psy17476          4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKA   83 (513)
Q Consensus         4 g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   83 (513)
                      -+|++.|+++.+  .++++.++.|+.||++||+|+|.+|+.|||+|||||||+.++.           .||         
T Consensus        94 ~NLYqLmK~R~r--~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~-----------iKi---------  151 (538)
T KOG0661|consen   94 CNLYQLMKDRNR--LFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDV-----------IKI---------  151 (538)
T ss_pred             hhHHHHHhhcCC--cCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccce-----------eEe---------
Confidence            379999998844  4799999999999999999999999999999999988885432           266         


Q ss_pred             cCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceee
Q psy17476         84 IEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKV  163 (513)
Q Consensus        84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  163 (513)
                         +||||++.                                                                    +
T Consensus       152 ---aDFGLARe--------------------------------------------------------------------v  160 (538)
T KOG0661|consen  152 ---ADFGLARE--------------------------------------------------------------------V  160 (538)
T ss_pred             ---cccccccc--------------------------------------------------------------------c
Confidence               99999981                                                                    0


Q ss_pred             ecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc-ccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        164 KDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY-TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       164 ~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .+...-..|+...|++                    |||++.. .-|+.++|+||+||+++|+.+ -++.|++.+..+.+
T Consensus       161 ~SkpPYTeYVSTRWYR--------------------APEvLLrs~~Ys~pvD~wA~GcI~aEl~s-LrPLFPG~sE~Dqi  219 (538)
T KOG0661|consen  161 RSKPPYTEYVSTRWYR--------------------APEVLLRSGYYSSPVDMWAVGCIMAELYS-LRPLFPGASEIDQI  219 (538)
T ss_pred             ccCCCcchhhhccccc--------------------chHHhhhccccCCchHHHHHHHHHHHHHH-hcccCCCCcHHHHH
Confidence            1111112344433332                    5666654 458999999999999999999 99999998876666


Q ss_pred             cccc
Q psy17476        243 DRVQ  246 (513)
Q Consensus       243 ~~i~  246 (513)
                      .+|.
T Consensus       220 ~KIc  223 (538)
T KOG0661|consen  220 YKIC  223 (538)
T ss_pred             HHHH
Confidence            5554

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.83  E-value=3.3e-21  Score=190.45  Aligned_cols=163  Identities=26%  Similarity=0.545  Sum_probs=118.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++..+...  +++..+..++.||+.||+|||+++++||||||+||+++.+           ..+++      
T Consensus        90 ~~~gsL~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~-----------~~~kl------  150 (279)
T cd05111          90 SPLGSLLDHVRQHRDS--LDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSD-----------SIVQI------  150 (279)
T ss_pred             CCCCcHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC-----------CcEEE------
Confidence            4789999999886543  5888999999999999999999999999999999655443           33455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                 .+         ...+
T Consensus       151 ------~Dfg~~~~~~-------------------------------------------------~~---------~~~~  166 (279)
T cd05111         151 ------ADFGVADLLY-------------------------------------------------PD---------DKKY  166 (279)
T ss_pred             ------cCCccceecc-------------------------------------------------CC---------Cccc
Confidence                  7888765100                                                 00         0000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++.+|                          ++||++....++.++|+|||||++||+++.|..||......+
T Consensus       167 -~~~~~~~~~~y--------------------------~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~  219 (279)
T cd05111         167 -FYSEHKTPIKW--------------------------MALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE  219 (279)
T ss_pred             -ccCCCCCcccc--------------------------cCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence             00001122334                          445555556789999999999999999988999998877766


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.+.+.++.+++.+            +||..++..||++.+++..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~  264 (279)
T cd05111         220 VPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANE  264 (279)
T ss_pred             HHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            66666666655543            5899999999999998764

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0986|consensus

Probab=99.83  E-value=8.2e-22  Score=194.64  Aligned_cols=124  Identities=21%  Similarity=0.372  Sum_probs=99.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |.||||.-+|.+++.+ ++++.+++.+|.||++||++||..+||+||+||+|||++.+|           ..+|      
T Consensus       267 MNGGDLkfHiyn~g~~-gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~G-----------hvRI------  328 (591)
T KOG0986|consen  267 MNGGDLKFHIYNHGNP-GFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHG-----------HVRI------  328 (591)
T ss_pred             ecCCceeEEeeccCCC-CCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCC-----------CeEe------
Confidence            8899999999998875 799999999999999999999999999999999995444444           4455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|+||+-                                                 .+.+|+.           
T Consensus       329 ------SDLGLAv-------------------------------------------------ei~~g~~-----------  342 (591)
T KOG0986|consen  329 ------SDLGLAV-------------------------------------------------EIPEGKP-----------  342 (591)
T ss_pred             ------eccceEE-------------------------------------------------ecCCCCc-----------
Confidence                  8999874                                                 0111111           


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK  237 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~  237 (513)
                        .+...||.|||+||++                          ....|+..+|+||+||++|||+. |+.||....
T Consensus       343 --~~~rvGT~GYMAPEvl--------------------------~ne~Y~~s~Dwf~lGCllYemi~-G~sPFr~~K  390 (591)
T KOG0986|consen  343 --IRGRVGTVGYMAPEVL--------------------------QNEVYDFSPDWFSLGCLLYEMIA-GHSPFRQRK  390 (591)
T ss_pred             --cccccCcccccCHHHH--------------------------cCCcccCCccHHHHHhHHHHHHc-ccCchhhhh
Confidence              1334588999877664                          44579999999999999999999 999996443

>KOG0583|consensus

Probab=99.83  E-value=3.1e-21  Score=196.81  Aligned_cols=134  Identities=19%  Similarity=0.329  Sum_probs=99.9

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .+|+|++++.+++   .+.+..++.+++|++.|++|||++||+||||||+|+|++.+          ..+.|+       
T Consensus       103 ~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~----------~~~~Kl-------  162 (370)
T KOG0583|consen  103 SGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGN----------EGNLKL-------  162 (370)
T ss_pred             CCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCC----------CCCEEE-------
Confidence            5799999999943   35889999999999999999999999999999999433333          145566       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .|||++.-..                                                ..+             +
T Consensus       163 -----~DFG~s~~~~------------------------------------------------~~~-------------~  176 (370)
T KOG0583|consen  163 -----SDFGLSAISP------------------------------------------------GED-------------G  176 (370)
T ss_pred             -----eccccccccC------------------------------------------------CCC-------------C
Confidence                 8888876100                                                000             0


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccccc-c-cccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTR-F-SSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~-~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                      .....+|++.|+|||++.                          ... | +.++||||+|+++|.|++ |..||...+..
T Consensus       177 ~l~t~cGsp~Y~aPEvl~--------------------------~~~~Y~g~~aDvWS~GViLy~ml~-G~~PF~d~~~~  229 (370)
T KOG0583|consen  177 LLKTFCGSPAYAAPEVLS--------------------------GKGTYSGKAADVWSLGVILYVLLC-GRLPFDDSNVP  229 (370)
T ss_pred             cccCCCCCcccCCHHHhC--------------------------CCCCcCCchhhhhhhHHHHHHHHh-CCCCCCCccHH
Confidence            113345666666666554                          334 5 588999999999999999 99999987777


Q ss_pred             eeccccccc
Q psy17476        240 EVVDRVQRG  248 (513)
Q Consensus       240 ~~~~~i~~~  248 (513)
                      .+...|.++
T Consensus       230 ~l~~ki~~~  238 (370)
T KOG0583|consen  230 NLYRKIRKG  238 (370)
T ss_pred             HHHHHHhcC
Confidence            777776555

>KOG1187|consensus

Probab=99.82  E-value=1.8e-21  Score=198.05  Aligned_cols=125  Identities=27%  Similarity=0.473  Sum_probs=101.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcc---eeccccCcccccccCccccccccCCccCCCceEEE
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHN---YIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVA   77 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~---iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~   77 (513)
                      |++|+|.++|+..... +++|..+.+||.++|+||+|||...   ||||||||+|           +|+|.++.+|+   
T Consensus       154 m~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssN-----------ILLD~~~~aKl---  218 (361)
T KOG1187|consen  154 MPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSN-----------ILLDEDFNAKL---  218 (361)
T ss_pred             cCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHH-----------eeECCCCCEEc---
Confidence            7899999999997765 6799999999999999999999965   9999999999           66778899999   


Q ss_pred             eccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCC
Q psy17476         78 LYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ  157 (513)
Q Consensus        78 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  157 (513)
                               +||||++-.+.+                                                          .
T Consensus       219 ---------sDFGLa~~~~~~----------------------------------------------------------~  231 (361)
T KOG1187|consen  219 ---------SDFGLAKLGPEG----------------------------------------------------------D  231 (361)
T ss_pred             ---------cCccCcccCCcc----------------------------------------------------------c
Confidence                     999998721100                                                          0


Q ss_pred             ccceeeecC-CCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCC
Q psy17476        158 EHWWKVKDK-NGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRL  236 (513)
Q Consensus       158 ~~~~~~~~~-~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~  236 (513)
                      .   ..... .|+.||++|||+...                          ..+.++||||||+++.|++| |+.|.+..
T Consensus       232 ~---~~~~~~~gt~gY~~PEy~~~g--------------------------~lt~KsDVySFGVvllElit-gr~~~d~~  281 (361)
T KOG1187|consen  232 T---SVSTTVMGTFGYLAPEYASTG--------------------------KLTEKSDVYSFGVVLLELIT-GRKAVDQS  281 (361)
T ss_pred             c---ceeeecCCCCccCChhhhccC--------------------------CcCcccccccchHHHHHHHh-CCcccCCC
Confidence            0   00111 489999999997643                          45889999999999999999 99888754


Q ss_pred             C
Q psy17476        237 K  237 (513)
Q Consensus       237 ~  237 (513)
                      .
T Consensus       282 ~  282 (361)
T KOG1187|consen  282 R  282 (361)
T ss_pred             C
Confidence            3

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.82  E-value=7e-21  Score=192.36  Aligned_cols=159  Identities=19%  Similarity=0.246  Sum_probs=111.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   .+++..++.++.||+.||+|||++||+||||||+||+++.++           ..++      
T Consensus        77 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~-----------~~kl------  136 (323)
T cd05571          77 ANGGELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG-----------HIKI------  136 (323)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC-----------CEEE------
Confidence            46899999998765   468999999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                .+.            
T Consensus       137 ------~DfG~a~~~~~------------------------------------------------~~~------------  150 (323)
T cd05571         137 ------TDFGLCKEGIS------------------------------------------------DGA------------  150 (323)
T ss_pred             ------eeCCCCccccc------------------------------------------------CCC------------
Confidence                  78887651000                                                000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+                          +.+||||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       151 -~~~~~~gt--------------------------~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~Pf~~~~~~~  202 (323)
T cd05571         151 -TMKTFCGT--------------------------PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHEK  202 (323)
T ss_pred             -cccceecC--------------------------ccccChhhhcCCCCCccccCcccchhhhhhhc-CCCCCCCCCHHH
Confidence             00001133                          44455666666678999999999999999999 999998777666


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHH-----HHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQ-----RAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~-----~aeeLL~~  273 (513)
                      +...+..+....+.           .||..++..|+     .+.+++.+
T Consensus       203 ~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         203 LFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence            65555433221111           35667777777     67777765

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG4279|consensus

Probab=99.82  E-value=1e-20  Score=194.70  Aligned_cols=165  Identities=20%  Similarity=0.328  Sum_probs=122.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +|||||.++|+....++.=++.++-.+.+||++||.|||++.|||||||-.||||+..-          ...||      
T Consensus       654 VPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTyS----------GvlKI------  717 (1226)
T KOG4279|consen  654 VPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYS----------GVLKI------  717 (1226)
T ss_pred             CCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeecc----------ceEEe------
Confidence            58999999999987654448999999999999999999999999999999998887742          22355      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||-+|..-                                              .+.+              
T Consensus       718 ------SDFGTsKRLA----------------------------------------------ginP--------------  731 (1226)
T KOG4279|consen  718 ------SDFGTSKRLA----------------------------------------------GINP--------------  731 (1226)
T ss_pred             ------cccccchhhc----------------------------------------------cCCc--------------
Confidence                  7888766200                                              0000              


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC-cc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~-~~  239 (513)
                       -...+.||..||+||.+...                        .+.|+.++|||||||++.||.| |++||-... +.
T Consensus       732 -~TETFTGTLQYMAPEvIDqG------------------------~RGYG~aADIWS~GCT~vEMAT-GrPPF~Elgspq  785 (1226)
T KOG4279|consen  732 -CTETFTGTLQYMAPEVIDQG------------------------PRGYGKAADIWSFGCTMVEMAT-GRPPFVELGSPQ  785 (1226)
T ss_pred             -cccccccchhhhChHhhccC------------------------CcCCCchhhhhhccceeEeecc-CCCCeeecCChh
Confidence             00123467777777766432                        3579999999999999999999 999996443 34


Q ss_pred             eecccccc-ccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQR-GIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~-~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+-+|.. ...++.|            +|+..++..|++|..||.+
T Consensus       786 AAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  786 AAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD  832 (1226)
T ss_pred             HhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence            44444432 3445555            5888999999999999875

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.82  E-value=7.1e-21  Score=191.57  Aligned_cols=163  Identities=27%  Similarity=0.540  Sum_probs=118.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++++++...  +++..+..++.||+.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        90 ~~~g~l~~~l~~~~~~--~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~-----------~~kl------  150 (316)
T cd05108          90 MPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQ-----------HVKI------  150 (316)
T ss_pred             CCCCCHHHHHHhcccc--CCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCC-----------cEEE------
Confidence            5789999999987644  57889999999999999999999999999999996554443           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-..                                                          .... .
T Consensus       151 ------~DfG~a~~~~----------------------------------------------------------~~~~-~  165 (316)
T cd05108         151 ------TDFGLAKLLG----------------------------------------------------------ADEK-E  165 (316)
T ss_pred             ------cccccccccc----------------------------------------------------------CCCc-c
Confidence                  7888776100                                                          0000 0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      +......++.                          .+|+||++....++.++|+|||||++||++++|..||......+
T Consensus       166 ~~~~~~~~~~--------------------------~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~  219 (316)
T cd05108         166 YHAEGGKVPI--------------------------KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE  219 (316)
T ss_pred             eeccCCccce--------------------------eecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            0000001122                          24556666667889999999999999999988999998877766


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+++.+            .||..++..||++.+++..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         220 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            66656555555433            5899999999999998864

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0201|consensus

Probab=99.81  E-value=3.5e-21  Score=190.05  Aligned_cols=159  Identities=20%  Similarity=0.286  Sum_probs=123.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |.||++.+.|+...   .+++..+..++++++.||.|||+++.||||||+.|||++.++           .+|+      
T Consensus        93 ~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g-----------~vkl------  152 (467)
T KOG0201|consen   93 CGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG-----------DVKL------  152 (467)
T ss_pred             hcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC-----------cEEE------
Confidence            46899999988765   347889999999999999999999999999999997666654           2333      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++-    .                                                              
T Consensus       153 ------~DfgVa~----q--------------------------------------------------------------  160 (467)
T KOG0201|consen  153 ------ADFGVAG----Q--------------------------------------------------------------  160 (467)
T ss_pred             ------Eecceee----e--------------------------------------------------------------
Confidence                  5666542    0                                                              


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                                  +.....++.         .+-|+|-|||||+|....|+.++||||||++.+||.+ |.+|+....+..
T Consensus       161 ------------l~~~~~rr~---------tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~-GePP~s~~hPmr  218 (467)
T KOG0201|consen  161 ------------LTNTVKRRK---------TFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAK-GEPPHSKLHPMR  218 (467)
T ss_pred             ------------eechhhccc---------cccccccccchhhhccccccchhhhhhhhHHHHHHhc-CCCCCcccCcce
Confidence                        000000000         1236778899999998899999999999999999999 999999999988


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++..|-+..+|...            .|...++..|++|.+||++
T Consensus       219 vlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  219 VLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             EEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            88888665554443            3677889999999999987

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.81  E-value=1.1e-20  Score=192.00  Aligned_cols=147  Identities=22%  Similarity=0.414  Sum_probs=100.1

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccccccCCCCcccccCCeE
Q psy17476         18 GGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEY   97 (513)
Q Consensus        18 ~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   97 (513)
                      ++++..+..++.||+.||+|||+++|+||||||+|||++.++           ..++            .|||+++...-
T Consensus       170 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~-----------~~kl------------~DfG~a~~~~~  226 (338)
T cd05102         170 PLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENN-----------VVKI------------CDFGLARDIYK  226 (338)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCC-----------cEEE------------eeccccccccc
Confidence            367788999999999999999999999999999996555443           3455            78887751000


Q ss_pred             EeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCc
Q psy17476         98 EVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNY  177 (513)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~  177 (513)
                                                                       .          ..........++.       
T Consensus       227 -------------------------------------------------~----------~~~~~~~~~~~~~-------  240 (338)
T cd05102         227 -------------------------------------------------D----------PDYVRKGSARLPL-------  240 (338)
T ss_pred             -------------------------------------------------C----------cchhcccCCCCCc-------
Confidence                                                             0          0000000001222       


Q ss_pred             eeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc-eeccccccccccCCC--
Q psy17476        178 VKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT-EVVDRVQRGIILEKP--  254 (513)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~-~~~~~i~~~~~~~~p--  254 (513)
                                         .+||||++....++.++|||||||++|||++.|..||...... .+...+..+.....|  
T Consensus       241 -------------------~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  301 (338)
T cd05102         241 -------------------KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPEN  301 (338)
T ss_pred             -------------------cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCC
Confidence                               3455666666678999999999999999997799999875543 333333433333222  


Q ss_pred             ----------CCcCCCCCCHHHHHHHHc
Q psy17476        255 ----------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       255 ----------~~w~~~~~~R~~aeeLL~  272 (513)
                                +||..++..||++.+++.
T Consensus       302 ~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         302 ATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                      588999999999998875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.81  E-value=9e-21  Score=185.92  Aligned_cols=161  Identities=27%  Similarity=0.488  Sum_probs=116.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++..  .+++..++.++.|++.||+|||+++++||||||+||+++.++           ..++      
T Consensus        88 ~~~~~L~~~l~~~~~--~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~-----------~~~l------  148 (266)
T cd05064          88 MSNGALDSFLRKHEG--QLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDL-----------VCKI------  148 (266)
T ss_pred             CCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCC-----------cEEE------
Confidence            468999999988654  358889999999999999999999999999999996554443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++.....                                                            ...
T Consensus       149 ------~dfg~~~~~~~------------------------------------------------------------~~~  162 (266)
T cd05064         149 ------SGFRRLQEDKS------------------------------------------------------------EAI  162 (266)
T ss_pred             ------CCCcccccccc------------------------------------------------------------cch
Confidence                  56665431000                                                            000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......                          +...+++||++....++.++|+|||||++||+++.|..||...+..+
T Consensus       163 ~~~~~~~--------------------------~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~  216 (266)
T cd05064         163 YTTMSGK--------------------------SPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD  216 (266)
T ss_pred             hcccCCC--------------------------CceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence            0000000                          11234566667777889999999999999998866999999888777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+.++.+.+.|            +||...+..||++++++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         217 VIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence            77777766555444            589999999999988865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0200|consensus

Probab=99.81  E-value=1.7e-20  Score=204.03  Aligned_cols=165  Identities=27%  Similarity=0.499  Sum_probs=129.7

Q ss_pred             CCCcHHHHHHhcC--C---C--------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCc
Q psy17476          2 RHGSLLNYLRRHE--N---T--------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQ   68 (513)
Q Consensus         2 ~~g~L~~~l~~~~--~---~--------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~   68 (513)
                      ++|+|.+||++++  .   .        -.+....+..++.|||.||+||++..+|||||.++||||..+.+        
T Consensus       385 ~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~--------  456 (609)
T KOG0200|consen  385 EHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKV--------  456 (609)
T ss_pred             cCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCE--------
Confidence            6899999999987  0   0        12677789999999999999999999999999999987777753        


Q ss_pred             cCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCC
Q psy17476         69 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGA  148 (513)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  148 (513)
                         .||            +||||++.-                                                     
T Consensus       457 ---~kI------------aDFGlar~~-----------------------------------------------------  468 (609)
T KOG0200|consen  457 ---IKI------------ADFGLARDH-----------------------------------------------------  468 (609)
T ss_pred             ---EEE------------ccccceecc-----------------------------------------------------
Confidence               255            999999810                                                     


Q ss_pred             EEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeec
Q psy17476        149 EYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTC  228 (513)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~  228 (513)
                                              .+.+++......  .. -|++    |||||++....|+.++||||||+++||++|.
T Consensus       469 ------------------------~~~~~y~~~~~~--~~-LP~k----WmApEsl~~~~ft~kSDVWSfGI~L~EifsL  517 (609)
T KOG0200|consen  469 ------------------------YNKDYYRTKSSA--GT-LPVK----WMAPESLFDRVFTSKSDVWSFGILLWEIFTL  517 (609)
T ss_pred             ------------------------CCCCceEecCCC--Cc-ccee----ecCHHHhccCcccccchhhHHHHHHHHHhhC
Confidence                                    011111110000  00 1222    5788889999999999999999999999999


Q ss_pred             CCCCCCCCC-cceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        229 GKMPYGRLK-NTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       229 g~~pf~~~~-~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      |..||.+.. ..++++.++.|.|+..|            .||...+..||.+.++...
T Consensus       518 G~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~  575 (609)
T KOG0200|consen  518 GGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEF  575 (609)
T ss_pred             CCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            999999876 77888889999999888            5999999999999998764

>KOG0694|consensus

Probab=99.81  E-value=4.6e-21  Score=198.61  Aligned_cols=134  Identities=22%  Similarity=0.339  Sum_probs=100.3

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .|||+..+  .+.+.  +++.+++.||.+|++||.|||++||||||||.+|||++.+|           ..||       
T Consensus       452 ~Ggdm~~~--~~~~~--F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG-----------h~ki-------  509 (694)
T KOG0694|consen  452 AGGDLMHH--IHTDV--FSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG-----------HVKI-------  509 (694)
T ss_pred             CCCcEEEE--Eeccc--ccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC-----------cEEe-------
Confidence            46773322  23233  58999999999999999999999999999999995555554           4466       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           +||||+|...-                                                .|+             
T Consensus       510 -----ADFGlcKe~m~------------------------------------------------~g~-------------  523 (694)
T KOG0694|consen  510 -----ADFGLCKEGMG------------------------------------------------QGD-------------  523 (694)
T ss_pred             -----cccccccccCC------------------------------------------------CCC-------------
Confidence                 99999982110                                                000             


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      .+...+||+.|                          ||||++....|+.++|+|||||+||||+. |+.||++.+.+++
T Consensus       524 ~TsTfCGTpey--------------------------~aPEil~e~~Yt~aVDWW~lGVLlyeML~-Gq~PF~gddEee~  576 (694)
T KOG0694|consen  524 RTSTFCGTPEF--------------------------LAPEVLTEQSYTRAVDWWGLGVLLYEMLV-GESPFPGDDEEEV  576 (694)
T ss_pred             ccccccCChhh--------------------------cChhhhccCcccchhhHHHHHHHHHHHHc-CCCCCCCCCHHHH
Confidence            11234455444                          55566667789999999999999999999 9999999999999


Q ss_pred             ccccccccc
Q psy17476        242 VDRVQRGII  250 (513)
Q Consensus       242 ~~~i~~~~~  250 (513)
                      .+.|.....
T Consensus       577 FdsI~~d~~  585 (694)
T KOG0694|consen  577 FDSIVNDEV  585 (694)
T ss_pred             HHHHhcCCC
Confidence            998865433

>KOG0667|consensus

Probab=99.80  E-value=1.8e-20  Score=194.06  Aligned_cols=137  Identities=22%  Similarity=0.307  Sum_probs=106.7

Q ss_pred             CcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCcc-CCCceEEEecccc
Q psy17476          4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQM-IRPKVVVALYPFK   82 (513)
Q Consensus         4 g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~   82 (513)
                      -||++||+.+... |++...++.|+.||+.||.+||+.+|||+||||||          |||.+.. ...||        
T Consensus       272 ~NLYellK~n~f~-Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPEN----------ILL~~~~r~~vKV--------  332 (586)
T KOG0667|consen  272 TNLYELLKNNKFR-GLSLPLVRKFAQQILTALLFLHELGIIHCDLKPEN----------ILLKDPKRSRIKV--------  332 (586)
T ss_pred             hhHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhh----------eeeccCCcCceeE--------
Confidence            4899999998866 78999999999999999999999999999999999          4554432 22344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||.+.-+                                                   +.              
T Consensus       333 ----IDFGSSc~~---------------------------------------------------~q--------------  343 (586)
T KOG0667|consen  333 ----IDFGSSCFE---------------------------------------------------SQ--------------  343 (586)
T ss_pred             ----Eeccccccc---------------------------------------------------CC--------------
Confidence                677665400                                                   00              


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                           +-..|+-+.|+                    .|||+|.+.+|+.+.|||||||++.||++ |.+.|++.+..+.+
T Consensus       344 -----~vytYiQSRfY--------------------RAPEVILGlpY~~~IDmWSLGCIlAEL~t-G~PLfpG~ne~DQl  397 (586)
T KOG0667|consen  344 -----RVYTYIQSRFY--------------------RAPEVILGLPYDTAIDMWSLGCILAELFT-GEPLFPGDNEYDQL  397 (586)
T ss_pred             -----cceeeeecccc--------------------ccchhhccCCCCCccceeehhhhHHhHhc-CccccCCCCHHHHH
Confidence                 11123333332                    47999999999999999999999999999 99999999998888


Q ss_pred             cccccccccCCC
Q psy17476        243 DRVQRGIILEKP  254 (513)
Q Consensus       243 ~~i~~~~~~~~p  254 (513)
                      .+|.+...+|++
T Consensus       398 ~~I~e~lG~Pp~  409 (586)
T KOG0667|consen  398 ARIIEVLGLPPP  409 (586)
T ss_pred             HHHHHHhCCCCH
Confidence            888766556555

>KOG0604|consensus

Probab=99.80  E-value=3.4e-20  Score=174.66  Aligned_cols=152  Identities=16%  Similarity=0.269  Sum_probs=112.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |+||+|++.+..+++. ++++..+..|++||+.|+.|||+.+|.||||||+|+|....          ...+-+++    
T Consensus       141 meGGeLfsriq~~g~~-afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t----------~~na~lKL----  205 (400)
T KOG0604|consen  141 MEGGELFSRIQDRGDQ-AFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTT----------SPNAPLKL----  205 (400)
T ss_pred             ccchHHHHHHHHcccc-cchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecC----------CCCcceEe----
Confidence            7899999999998875 58999999999999999999999999999999999544443          22332222    


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||++|.+.                                                                
T Consensus       206 ------tDfGFAK~t~----------------------------------------------------------------  215 (400)
T KOG0604|consen  206 ------TDFGFAKETQ----------------------------------------------------------------  215 (400)
T ss_pred             ------cccccccccC----------------------------------------------------------------
Confidence                  7777776210                                                                


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc--
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN--  238 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~--  238 (513)
                             .....+.|-+                 +|-++|||+++..+|+..+|+||+|+++|-|+- |-+||-++..  
T Consensus       216 -------~~~~L~TPc~-----------------TPyYvaPevlg~eKydkscdmwSlgVimYIlLC-GyPPFYS~hg~a  270 (400)
T KOG0604|consen  216 -------EPGDLMTPCF-----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC-GYPPFYSNHGLA  270 (400)
T ss_pred             -------CCccccCCcc-----------------cccccCHHHhCchhcCCCCCccchhHHHHHhhc-CCCcccccCCcc
Confidence                   0001111111                 223356777888899999999999999999995 9999965544  


Q ss_pred             --ceeccccccccccCCCCCcCCCCC
Q psy17476        239 --TEVVDRVQRGIILEKPKAWYVGDM  262 (513)
Q Consensus       239 --~~~~~~i~~~~~~~~p~~w~~~~~  262 (513)
                        ..+..+|+.|....+...|.--..
T Consensus       271 ispgMk~rI~~gqy~FP~pEWs~VSe  296 (400)
T KOG0604|consen  271 ISPGMKRRIRTGQYEFPEPEWSCVSE  296 (400)
T ss_pred             CChhHHhHhhccCccCCChhHhHHHH
Confidence              344677888888888888865433

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=4.3e-20  Score=187.10  Aligned_cols=135  Identities=16%  Similarity=0.241  Sum_probs=96.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        78 ~~~g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~-----------~~kl------  137 (330)
T cd05586          78 MSGGELFWHLQKEG---RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG-----------HIAL------  137 (330)
T ss_pred             CCCChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC-----------CEEE------
Confidence            46899999998754   358889999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                .         ..   
T Consensus       138 ------~Dfg~a~~~~~------------------------------------------------~---------~~---  151 (330)
T cd05586         138 ------CDFGLSKANLT------------------------------------------------D---------NK---  151 (330)
T ss_pred             ------ecCCcCcCCCC------------------------------------------------C---------CC---
Confidence                  77777651000                                                0         00   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|||.+..                         ...++.++||||+||++|||++ |..||...+..+
T Consensus       152 -~~~~~~gt~~y~aPE~~~~-------------------------~~~~~~~~DvwslGvil~ellt-G~~Pf~~~~~~~  204 (330)
T cd05586         152 -TTNTFCGTTEYLAPEVLLD-------------------------EKGYTKHVDFWSLGVLVFEMCC-GWSPFYAEDTQQ  204 (330)
T ss_pred             -CccCccCCccccCHHHHcC-------------------------CCCCCCccceeccccEEEEecc-CCCCCCCCCHHH
Confidence             0011225555666554321                         2247889999999999999999 999998877666


Q ss_pred             eccccccc
Q psy17476        241 VVDRVQRG  248 (513)
Q Consensus       241 ~~~~i~~~  248 (513)
                      +...+..+
T Consensus       205 ~~~~i~~~  212 (330)
T cd05586         205 MYRNIAFG  212 (330)
T ss_pred             HHHHHHcC
Confidence            66655433

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.80  E-value=2.5e-20  Score=191.51  Aligned_cols=168  Identities=17%  Similarity=0.246  Sum_probs=103.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||+|||++|||||||||+|||++.++           ..++      
T Consensus        83 ~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~-----------~vkL------  142 (363)
T cd05628          83 LPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKG-----------HVKL------  142 (363)
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC-----------CEEE------
Confidence            47899999998764   468999999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.....    ..                    ...+...   ......+..+......    .....|
T Consensus       143 ------~DFGla~~~~~~----~~--------------------~~~~~~~---~~~~~~~~~~~~~~~~----~~~~~~  185 (363)
T cd05628         143 ------SDFGLCTGLKKA----HR--------------------TEFYRNL---NHSLPSDFTFQNMNSK----RKAETW  185 (363)
T ss_pred             ------eeccCccccccc----cc--------------------ccccccc---cccccccccccccccc----cccchh
Confidence                  777776521000    00                    0000000   0000000000000000    000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ....           .          .....+.|++.+||||++....++.++|+|||||++|||++ |..||...+..+
T Consensus       186 ~~~~-----------~----------~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~-G~~Pf~~~~~~~  243 (363)
T cd05628         186 KRNR-----------R----------QLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI-GYPPFCSETPQE  243 (363)
T ss_pred             hhcc-----------c----------cccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHh-CCCCCCCCCHHH
Confidence            0000           0          00001235667778888888889999999999999999999 999998877777


Q ss_pred             ecccccc
Q psy17476        241 VVDRVQR  247 (513)
Q Consensus       241 ~~~~i~~  247 (513)
                      +...+..
T Consensus       244 ~~~~i~~  250 (363)
T cd05628         244 TYKKVMN  250 (363)
T ss_pred             HHHHHHc
Confidence            7666643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG1024|consensus

Probab=99.80  E-value=9e-21  Score=184.18  Aligned_cols=163  Identities=26%  Similarity=0.442  Sum_probs=126.6

Q ss_pred             CCcHHHHHHh-----cCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEE
Q psy17476          3 HGSLLNYLRR-----HENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVA   77 (513)
Q Consensus         3 ~g~L~~~l~~-----~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~   77 (513)
                      -|+|..||..     ....-.++-.++..|+.|++.||+|||+++|||.||..+|.           +.|+....|+   
T Consensus       372 ~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNC-----------vIdd~LqVkl---  437 (563)
T KOG1024|consen  372 VGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNC-----------VIDDQLQVKL---  437 (563)
T ss_pred             cchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcc-----------eehhheeEEe---
Confidence            4899999993     22222456667889999999999999999999999999993           3333345555   


Q ss_pred             eccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCC
Q psy17476         78 LYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ  157 (513)
Q Consensus        78 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  157 (513)
                               .|-.|++                                                                
T Consensus       438 ---------tDsaLSR----------------------------------------------------------------  444 (563)
T KOG1024|consen  438 ---------TDSALSR----------------------------------------------------------------  444 (563)
T ss_pred             ---------ccchhcc----------------------------------------------------------------
Confidence                     5555554                                                                


Q ss_pred             ccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC
Q psy17476        158 EHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK  237 (513)
Q Consensus       158 ~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~  237 (513)
                                   ..+|-.|.    +++--.++|++|    |++|.+....|+.++|+||||+++|||+|.|+.||...+
T Consensus       445 -------------DLFP~DYh----cLGDnEnRPvkW----MslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeID  503 (563)
T KOG1024|consen  445 -------------DLFPGDYH----CLGDNENRPVKW----MSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID  503 (563)
T ss_pred             -------------ccCccccc----ccCCCCCCcccc----cCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC
Confidence                         11233332    223334566776    556677788999999999999999999999999999999


Q ss_pred             cceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 NTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.|+...+..|+|+..|            -||...+..||+++++...
T Consensus       504 PfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~c  551 (563)
T KOG1024|consen  504 PFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVIC  551 (563)
T ss_pred             HHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHH
Confidence            99999999999999877            4899999999999998653

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.80  E-value=2.2e-20  Score=185.22  Aligned_cols=57  Identities=19%  Similarity=0.194  Sum_probs=48.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      |++|+|.+++...... ++++..+..++.|++.||+|||+++|+||||||+|||++.+
T Consensus        82 ~~~g~L~~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~  138 (285)
T cd05631          82 MNGGDLKFHIYNMGNP-GFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDR  138 (285)
T ss_pred             cCCCcHHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCC
Confidence            5789999998765433 47889999999999999999999999999999999655444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.80  E-value=2.9e-20  Score=189.17  Aligned_cols=131  Identities=18%  Similarity=0.268  Sum_probs=99.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   .+++..+..++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus       113 ~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~-----------~ikL------  172 (340)
T PTZ00426        113 VIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG-----------FIKM------  172 (340)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC-----------CEEE------
Confidence            46899999998865   368889999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          +..    
T Consensus       173 ------~DFG~a~~~----------------------------------------------------------~~~----  184 (340)
T PTZ00426        173 ------TDFGFAKVV----------------------------------------------------------DTR----  184 (340)
T ss_pred             ------ecCCCCeec----------------------------------------------------------CCC----
Confidence                  788876510                                                          000    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        ...                          +.|++.+||||++....++.++|+||+||++|||++ |..||...+...
T Consensus       185 --~~~--------------------------~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~  235 (340)
T PTZ00426        185 --TYT--------------------------LCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILV-GCPPFYANEPLL  235 (340)
T ss_pred             --cce--------------------------ecCChhhcCHHHHhCCCCCccccccchhhHHHHHhc-CCCCCCCCCHHH
Confidence              000                          113445566777777778999999999999999999 999998877766


Q ss_pred             eccccccc
Q psy17476        241 VVDRVQRG  248 (513)
Q Consensus       241 ~~~~i~~~  248 (513)
                      +.+.+..+
T Consensus       236 ~~~~i~~~  243 (340)
T PTZ00426        236 IYQKILEG  243 (340)
T ss_pred             HHHHHhcC
Confidence            66666544

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.80  E-value=2.9e-20  Score=183.52  Aligned_cols=163  Identities=28%  Similarity=0.530  Sum_probs=118.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++++++...  +++..+..++.|++.||+|||+++|+||||||+|||++.++           .+++      
T Consensus        90 ~~~g~l~~~l~~~~~~--~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~-----------~~kL------  150 (279)
T cd05109          90 MPYGCLLDYVRENKDR--IGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPN-----------HVKI------  150 (279)
T ss_pred             CCCCCHHHHHhhccCC--CCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC-----------cEEE------
Confidence            5789999999886543  58889999999999999999999999999999996554433           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                          ..... 
T Consensus       151 ------~dfG~~~~~~----------------------------------------------------------~~~~~-  165 (279)
T cd05109         151 ------TDFGLARLLD----------------------------------------------------------IDETE-  165 (279)
T ss_pred             ------CCCCceeecc----------------------------------------------------------cccce-
Confidence                  7888765100                                                          00000 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      +......+                          .+.+|+||++....++.++|+|||||++|||++.|..||......+
T Consensus       166 ~~~~~~~~--------------------------~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  219 (279)
T cd05109         166 YHADGGKV--------------------------PIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE  219 (279)
T ss_pred             eecCCCcc--------------------------chhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            00000001                          1234566667677889999999999999999988999998777766


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+..++.+            +||..++..||++.+++..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~  264 (279)
T cd05109         220 IPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE  264 (279)
T ss_pred             HHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            66666665554443            6899999999999998854

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0584|consensus

Probab=99.80  E-value=6e-21  Score=195.97  Aligned_cols=156  Identities=27%  Similarity=0.468  Sum_probs=123.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcc--eeccccCcccccccCccccccccCCccCCCceEEEe
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHN--YIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVAL   78 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~--iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~   78 (513)
                      |..|+|+.|++++++   ++...++.||+||++||.|||++.  |||||||..||+|+.+          -..+||    
T Consensus       125 ~TSGtLr~Y~kk~~~---vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~----------~G~VKI----  187 (632)
T KOG0584|consen  125 FTSGTLREYRKKHRR---VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGN----------LGEVKI----  187 (632)
T ss_pred             ccCCcHHHHHHHhcc---CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCC----------cCceee----
Confidence            578999999999985   478899999999999999999995  9999999999777775          345677    


Q ss_pred             ccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCc
Q psy17476         79 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE  158 (513)
Q Consensus        79 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  158 (513)
                              +||||+.-                                                          +...  
T Consensus       188 --------GDLGLAtl----------------------------------------------------------~r~s--  199 (632)
T KOG0584|consen  188 --------GDLGLATL----------------------------------------------------------LRKS--  199 (632)
T ss_pred             --------cchhHHHH----------------------------------------------------------hhcc--
Confidence                    99999860                                                          0000  


Q ss_pred             cceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCC-CCC
Q psy17476        159 HWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYG-RLK  237 (513)
Q Consensus       159 ~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~-~~~  237 (513)
                         .+++..||+.+||||++..                           .|+..+||||||+.+.||+| +..||+ ..+
T Consensus       200 ---~aksvIGTPEFMAPEmYEE---------------------------~YnE~VDVYaFGMCmLEMvT-~eYPYsEC~n  248 (632)
T KOG0584|consen  200 ---HAKSVIGTPEFMAPEMYEE---------------------------NYNELVDVYAFGMCMLEMVT-SEYPYSECTN  248 (632)
T ss_pred             ---ccceeccCccccChHHHhh---------------------------hcchhhhhhhhhHHHHHHHh-ccCChhhhCC
Confidence               1123347777888777652                           78999999999999999999 999997 456


Q ss_pred             cceeccccccccccCC------C-------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 NTEVVDRVQRGIILEK------P-------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ~~~~~~~i~~~~~~~~------p-------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +-+|+.+|..|..|..      |       +|... ...|+++.+||.+
T Consensus       249 ~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  249 PAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             HHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence            6788888887755432      2       35444 8899999999987

>KOG0597|consensus

Probab=99.80  E-value=1.4e-20  Score=190.20  Aligned_cols=135  Identities=16%  Similarity=0.333  Sum_probs=106.8

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      -|+|+.+|....   .++++.++.++.|++.||.|||+++|+|||+||.|||+..+           ...|+        
T Consensus        84 ~g~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~-----------~~~Kl--------  141 (808)
T KOG0597|consen   84 VGDLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKG-----------GTLKL--------  141 (808)
T ss_pred             hhhHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCC-----------Cceee--------
Confidence            479999999876   36899999999999999999999999999999999554444           44455        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          +|||+++-.                                                                   
T Consensus       142 ----cdFg~Ar~m-------------------------------------------------------------------  150 (808)
T KOG0597|consen  142 ----CDFGLARAM-------------------------------------------------------------------  150 (808)
T ss_pred             ----chhhhhhhc-------------------------------------------------------------------
Confidence                899998711                                                                   


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                           ++...|               ...|+|+|++||||.+....|+..+|+||+||++||+++ |++||-...-.++.
T Consensus       151 -----~~~t~v---------------ltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~-G~PPF~a~si~~Lv  209 (808)
T KOG0597|consen  151 -----STNTSV---------------LTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYV-GQPPFYARSITQLV  209 (808)
T ss_pred             -----ccCcee---------------eeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhc-CCCCchHHHHHHHH
Confidence                 000000               013678888888988888999999999999999999999 99999877766666


Q ss_pred             ccccccccc
Q psy17476        243 DRVQRGIIL  251 (513)
Q Consensus       243 ~~i~~~~~~  251 (513)
                      ..|.+....
T Consensus       210 ~~I~~d~v~  218 (808)
T KOG0597|consen  210 KSILKDPVK  218 (808)
T ss_pred             HHHhcCCCC
Confidence            666544333

>KOG0589|consensus

Probab=99.80  E-value=2.2e-20  Score=188.70  Aligned_cols=160  Identities=20%  Similarity=0.323  Sum_probs=124.2

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      +||+|.+.|++.+.. -++++++..|+.|++.|++|||+++|+|||||++||+.+.++.          . ++       
T Consensus        87 eGg~l~~~i~~~k~~-~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~----------V-kL-------  147 (426)
T KOG0589|consen   87 EGGDLAQLIKEQKGV-LFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKK----------V-KL-------  147 (426)
T ss_pred             CCCCHHHHHHHHhhc-cccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCc----------e-ee-------
Confidence            699999999997633 4799999999999999999999999999999999966555542          2 45       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           +|||++|-                                                          +....   .
T Consensus       148 -----gDfGlaK~----------------------------------------------------------l~~~~---~  161 (426)
T KOG0589|consen  148 -----GDFGLAKI----------------------------------------------------------LNPED---S  161 (426)
T ss_pred             -----cchhhhhh----------------------------------------------------------cCCch---h
Confidence                 99999881                                                          10000   0


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      .+....||+.|                          |-||.+...+|+.++||||+||++|||++ -+.+|...+...+
T Consensus       162 ~a~tvvGTp~Y--------------------------mcPEil~d~pYn~KSDiWsLGC~~yEm~~-lk~aF~a~~m~~L  214 (426)
T KOG0589|consen  162 LASTVVGTPYY--------------------------MCPEILSDIPYNEKSDIWSLGCCLYEMCT-LKPAFKASNMSEL  214 (426)
T ss_pred             hhheecCCCcc--------------------------cCHHHhCCCCCCccCcchhhcchHHHHHh-cccccCccchHHH
Confidence            01112244444                          55555666789999999999999999999 9999999999999


Q ss_pred             ccccccccccCCCC------------CcCCCCCCHHHHHHHHcC
Q psy17476        242 VDRVQRGIILEKPK------------AWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       242 ~~~i~~~~~~~~p~------------~w~~~~~~R~~aeeLL~~  273 (513)
                      +..|.++...|.|.            +....+..||.+.++|..
T Consensus       215 i~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  215 ILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            98888877666663            456778889999998876

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.80  E-value=2.8e-20  Score=187.80  Aligned_cols=135  Identities=19%  Similarity=0.256  Sum_probs=99.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||.|||+++|+||||||+||+++.++           ..++      
T Consensus        78 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~-----------~~kL------  137 (321)
T cd05591          78 VNGGDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG-----------HCKL------  137 (321)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC-----------CEEE------
Confidence            46899999998765   358889999999999999999999999999999996655543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                         . ...  
T Consensus       138 ------~Dfg~~~~~~---------------------------------------------------------~-~~~--  151 (321)
T cd05591         138 ------ADFGMCKEGI---------------------------------------------------------L-NGV--  151 (321)
T ss_pred             ------eecccceecc---------------------------------------------------------c-CCc--
Confidence                  7777764100                                                         0 000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......                          |++.++|||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       152 -~~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~Pf~~~~~~~  203 (321)
T cd05591         152 -TTTTFC--------------------------GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMA-GQPPFEADNEDD  203 (321)
T ss_pred             -cccccc--------------------------cCccccCHHHHcCCCCCCccceechhHHHHHHhc-CCCCCCCCCHHH
Confidence             000011                          3344556666666788999999999999999999 999999888777


Q ss_pred             ecccccccc
Q psy17476        241 VVDRVQRGI  249 (513)
Q Consensus       241 ~~~~i~~~~  249 (513)
                      +...+..+.
T Consensus       204 ~~~~i~~~~  212 (321)
T cd05591         204 LFESILHDD  212 (321)
T ss_pred             HHHHHHcCC
Confidence            777665443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0659|consensus

Probab=99.80  E-value=2.2e-20  Score=173.50  Aligned_cols=153  Identities=16%  Similarity=0.195  Sum_probs=110.9

Q ss_pred             cHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccccc
Q psy17476          5 SLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAI   84 (513)
Q Consensus         5 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   84 (513)
                      ||...|+....  .+....++.|+.|+++||+|||++.|+||||||.|+||+.+|.           .|+          
T Consensus        86 dLe~vIkd~~i--~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~-----------lKi----------  142 (318)
T KOG0659|consen   86 DLEVVIKDKNI--ILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQ-----------LKI----------  142 (318)
T ss_pred             cHHHHhccccc--ccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCc-----------EEe----------
Confidence            67788877654  4689999999999999999999999999999999987777773           355          


Q ss_pred             CCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeee
Q psy17476         85 EGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK  164 (513)
Q Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  164 (513)
                        +||||++.                                       |.+         +....             .
T Consensus       143 --ADFGLAr~---------------------------------------f~~---------p~~~~-------------~  159 (318)
T KOG0659|consen  143 --ADFGLARF---------------------------------------FGS---------PNRIQ-------------T  159 (318)
T ss_pred             --ecccchhc---------------------------------------cCC---------CCccc-------------c
Confidence              89999871                                       000         00000             0


Q ss_pred             cCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceeccc
Q psy17476        165 DKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDR  244 (513)
Q Consensus       165 ~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~  244 (513)
                      ...-|.-|-|||.+                         .+.+.|+..+|+||.||++.||+- |.+-|++.+..+.+..
T Consensus       160 ~~V~TRWYRAPELL-------------------------fGsr~Yg~~VDmWavGCI~AELll-r~P~fpG~sDidQL~~  213 (318)
T KOG0659|consen  160 HQVVTRWYRAPELL-------------------------FGSRQYGTGVDMWAVGCIFAELLL-RVPFFPGDSDIDQLSK  213 (318)
T ss_pred             cceeeeeccChHHh-------------------------ccchhcCCcchhhhHHHHHHHHHc-cCCCCCCCchHHHHHH
Confidence            00012223344433                         456789999999999999999997 8888899998888888


Q ss_pred             cccccccCCCCCcCCCCCCHHHHHHH
Q psy17476        245 VQRGIILEKPKAWYVGDMSRQRAESI  270 (513)
Q Consensus       245 i~~~~~~~~p~~w~~~~~~R~~aeeL  270 (513)
                      |-+...-|.++.|.. ..+-|+..++
T Consensus       214 If~~LGTP~~~~WP~-~~~lpdY~~~  238 (318)
T KOG0659|consen  214 IFRALGTPTPDQWPE-MTSLPDYVKI  238 (318)
T ss_pred             HHHHcCCCCcccCcc-ccccccHHHH
Confidence            877777788888854 3334444433

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.80  E-value=8.5e-20  Score=184.57  Aligned_cols=159  Identities=20%  Similarity=0.262  Sum_probs=109.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh-cceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER-HNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~-~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||+ ++|+||||||+|||++.++           ..++     
T Consensus        77 ~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~-----------~~kL-----  137 (325)
T cd05594          77 ANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG-----------HIKI-----  137 (325)
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC-----------CEEE-----
Confidence            46899999998765   46899999999999999999998 7999999999996655543           3344     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||+++...-                                                .+.           
T Consensus       138 -------~Dfg~~~~~~~------------------------------------------------~~~-----------  151 (325)
T cd05594         138 -------TDFGLCKEGIK------------------------------------------------DGA-----------  151 (325)
T ss_pred             -------ecCCCCeecCC------------------------------------------------CCc-----------
Confidence                   78887651000                                                000           


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                        ......|                          ++.+||||++....++.++|+||+||++|||++ |..||...+..
T Consensus       152 --~~~~~~g--------------------------t~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-G~~Pf~~~~~~  202 (325)
T cd05594         152 --TMKTFCG--------------------------TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHE  202 (325)
T ss_pred             --ccccccC--------------------------CcccCCHHHHccCCCCCccccccccceeeeecc-CCCCCCCCCHH
Confidence              0000113                          344556666666788999999999999999999 99999877766


Q ss_pred             eecccccccccc-CCC----------CCcCCCCCCHH-----HHHHHHcC
Q psy17476        240 EVVDRVQRGIIL-EKP----------KAWYVGDMSRQ-----RAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~-~~p----------~~w~~~~~~R~-----~aeeLL~~  273 (513)
                      ++...+...... +..          .++..++..|.     .+.+++.+
T Consensus       203 ~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         203 KLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             HHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            665555432211 111          34555666664     56666654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.80  E-value=1.6e-20  Score=200.20  Aligned_cols=164  Identities=20%  Similarity=0.217  Sum_probs=118.6

Q ss_pred             CCCCcHHHHHHhcCC-CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHEN-TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.++|+.+.. ..++++..+..++.|++.||+|||+++||||||||+|||++.++           ..++     
T Consensus       121 ~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~-----------~vkL-----  184 (496)
T PTZ00283        121 ANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNG-----------LVKL-----  184 (496)
T ss_pred             CCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCC-----------CEEE-----
Confidence            468999999987432 22578999999999999999999999999999999996555443           3455     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||+++.....                                                     .   ... 
T Consensus       185 -------~DFGls~~~~~~-----------------------------------------------------~---~~~-  200 (496)
T PTZ00283        185 -------GDFGFSKMYAAT-----------------------------------------------------V---SDD-  200 (496)
T ss_pred             -------EecccCeecccc-----------------------------------------------------c---ccc-
Confidence                   788887510000                                                     0   000 


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                        ......|+.+                          +|+||++....|+.++|||||||++|||++ |..||...+..
T Consensus       201 --~~~~~~Gt~~--------------------------Y~aPE~~~~~~~s~k~DVwSlGvilyeLlt-G~~Pf~~~~~~  251 (496)
T PTZ00283        201 --VGRTFCGTPY--------------------------YVAPEIWRRKPYSKKADMFSLGVLLYELLT-LKRPFDGENME  251 (496)
T ss_pred             --ccccccCCcc--------------------------eeCHHHhCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCCCHH
Confidence              0001124444                          455555666678999999999999999999 99999887777


Q ss_pred             eeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +++..+..+...+.|            .||..++..||++.+++.+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        252 EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            776666555443333            4788899999999999875

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=3.1e-20  Score=186.70  Aligned_cols=159  Identities=19%  Similarity=0.210  Sum_probs=108.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   .+++..++.++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        75 ~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~-----------~~kl------  134 (312)
T cd05585          75 INGGELFHHLQREG---RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQG-----------HIAL------  134 (312)
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC-----------cEEE------
Confidence            47899999998764   358889999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                         ... .  
T Consensus       135 ------~Dfg~~~~~~---------------------------------------------------------~~~-~--  148 (312)
T cd05585         135 ------CDFGLCKLNM---------------------------------------------------------KDD-D--  148 (312)
T ss_pred             ------EECcccccCc---------------------------------------------------------cCC-C--
Confidence                  7777765100                                                         000 0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..                          +||||++....++.++||||+||++|||++ |..||...+..+
T Consensus       149 -~~~~~~gt~~--------------------------y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~  200 (312)
T cd05585         149 -KTNTFCGTPE--------------------------YLAPELLLGHGYTKAVDWWTLGVLLYEMLT-GLPPFYDENVNE  200 (312)
T ss_pred             -ccccccCCcc--------------------------cCCHHHHcCCCCCCccceechhHHHHHHHh-CCCCcCCCCHHH
Confidence             0001123444                          455555666678999999999999999999 999998777666


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHH---HHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQ---RAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~---~aeeLL~~  273 (513)
                      +...+..+....++           .||..++..|+   .+.++|.+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h  247 (312)
T cd05585         201 MYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH  247 (312)
T ss_pred             HHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence            65555433211111           35666666664   45666654

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0033|consensus

Probab=99.80  E-value=4e-20  Score=169.68  Aligned_cols=155  Identities=19%  Similarity=0.339  Sum_probs=114.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |.||+|..-|-...   -.++..+..+++||+.+|+|+|.++|||||+||+|          ++|....-.+.+++    
T Consensus        92 m~G~dl~~eIV~R~---~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~n----------llLASK~~~A~vKL----  154 (355)
T KOG0033|consen   92 VTGGELFEDIVARE---FYSEADASHCIQQILEALAYCHSNGIVHRDLKPEN----------LLLASKAKGAAVKL----  154 (355)
T ss_pred             ccchHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhh----------eeeeeccCCCceee----
Confidence            67888876665542   35788999999999999999999999999999999          45554333333322    


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            ++||++..                                                         +-  ++.-|
T Consensus       155 ------~~FGvAi~---------------------------------------------------------l~--~g~~~  169 (355)
T KOG0033|consen  155 ------ADFGLAIE---------------------------------------------------------VN--DGEAW  169 (355)
T ss_pred             ------cccceEEE---------------------------------------------------------eC--Ccccc
Confidence                  67777651                                                         00  01111


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                         ..+.|+++|++||.++                          ..+|+..+||||.|+++|-++. |.+||.+.+...
T Consensus       170 ---~G~~GtP~fmaPEvvr--------------------------kdpy~kpvDiW~cGViLfiLL~-G~~PF~~~~~~r  219 (355)
T KOG0033|consen  170 ---HGFAGTPGYLSPEVLK--------------------------KDPYSKPVDIWACGVILYILLV-GYPPFWDEDQHR  219 (355)
T ss_pred             ---ccccCCCcccCHHHhh--------------------------cCCCCCcchhhhhhHHHHHHHh-CCCCCCCccHHH
Confidence               2234677777666654                          3478999999999999999999 999999999999


Q ss_pred             eccccccccccCCCCCcCCCCCCHHHH
Q psy17476        241 VVDRVQRGIILEKPKAWYVGDMSRQRA  267 (513)
Q Consensus       241 ~~~~i~~~~~~~~p~~w~~~~~~R~~a  267 (513)
                      +.+.|.++..-..++.|.+-..+....
T Consensus       220 lye~I~~g~yd~~~~~w~~is~~Ak~L  246 (355)
T KOG0033|consen  220 LYEQIKAGAYDYPSPEWDTVTPEAKSL  246 (355)
T ss_pred             HHHHHhccccCCCCcccCcCCHHHHHH
Confidence            999999988887777887654433333

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.80  E-value=3.8e-20  Score=187.44  Aligned_cols=159  Identities=19%  Similarity=0.260  Sum_probs=108.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        77 ~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~-----------~~kL------  136 (328)
T cd05593          77 VNGGELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG-----------HIKI------  136 (328)
T ss_pred             CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCC-----------cEEE------
Confidence            47899999998764   368899999999999999999999999999999996555443           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                         . ..  
T Consensus       137 ------~DfG~~~~~~~---------------------------------------------------------~-~~--  150 (328)
T cd05593         137 ------TDFGLCKEGIT---------------------------------------------------------D-AA--  150 (328)
T ss_pred             ------ecCcCCccCCC---------------------------------------------------------c-cc--
Confidence                  77877651000                                                         0 00  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|                          ||||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       151 -~~~~~~gt~~y--------------------------~aPE~~~~~~~~~~~DiwslGvil~ellt-G~~Pf~~~~~~~  202 (328)
T cd05593         151 -TMKTFCGTPEY--------------------------LAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHEK  202 (328)
T ss_pred             -ccccccCCcCc--------------------------cChhhhcCCCCCccCCccccchHHHHHhh-CCCCCCCCCHHH
Confidence             00011244444                          45555555678999999999999999999 999998777666


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHH-----HHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQ-----RAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~-----~aeeLL~~  273 (513)
                      +...+..+....++           .++..++..|+     .+.+++.+
T Consensus       203 ~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         203 LFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HHHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            66555433221111           34556666664     56666654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0600|consensus

Probab=99.80  E-value=1.9e-20  Score=187.59  Aligned_cols=143  Identities=18%  Similarity=0.245  Sum_probs=104.2

Q ss_pred             cHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccccc
Q psy17476          5 SLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAI   84 (513)
Q Consensus         5 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   84 (513)
                      ||..++....-.  +++.+++.|++|++.||+|||++||+|||||.+||||+.+|           ..||          
T Consensus       203 DL~GLl~~p~vk--ft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G-----------~LKi----------  259 (560)
T KOG0600|consen  203 DLSGLLSSPGVK--FTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNG-----------VLKI----------  259 (560)
T ss_pred             hhhhhhcCCCcc--cChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCC-----------CEEe----------
Confidence            777777775443  58999999999999999999999999999999996666665           3466          


Q ss_pred             CCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeee
Q psy17476         85 EGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK  164 (513)
Q Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  164 (513)
                        +||||++=                                       |.......                     -+
T Consensus       260 --aDFGLAr~---------------------------------------y~~~~~~~---------------------~T  277 (560)
T KOG0600|consen  260 --ADFGLARF---------------------------------------YTPSGSAP---------------------YT  277 (560)
T ss_pred             --ccccceee---------------------------------------ccCCCCcc---------------------cc
Confidence              99999870                                       00000000                     01


Q ss_pred             cCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceeccc
Q psy17476        165 DKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDR  244 (513)
Q Consensus       165 ~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~  244 (513)
                      +..-|.-|-|||++                         ++...|+.++|+||.||++.||++ |++.|.+.+..+.+..
T Consensus       278 ~rVvTLWYRpPELL-------------------------LG~t~Yg~aVDlWS~GCIl~El~~-gkPI~~G~tEveQl~k  331 (560)
T KOG0600|consen  278 SRVVTLWYRPPELL-------------------------LGATSYGTAVDLWSVGCILAELFL-GKPILQGRTEVEQLHK  331 (560)
T ss_pred             cceEEeeccChHHh-------------------------cCCcccccceeehhhhHHHHHHHc-CCCCcCCccHHHHHHH
Confidence            11123346666665                         345689999999999999999999 9999999988877777


Q ss_pred             cccccccCCCCCcC
Q psy17476        245 VQRGIILEKPKAWY  258 (513)
Q Consensus       245 i~~~~~~~~p~~w~  258 (513)
                      |-+....|...-|.
T Consensus       332 IfklcGSP~e~~W~  345 (560)
T KOG0600|consen  332 IFKLCGSPTEDYWP  345 (560)
T ss_pred             HHHHhCCCChhccc
Confidence            76544444444443

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.79  E-value=3.1e-20  Score=188.14  Aligned_cols=131  Identities=20%  Similarity=0.265  Sum_probs=99.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus       100 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~-----------~~kl------  159 (329)
T PTZ00263        100 VVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG-----------HVKV------  159 (329)
T ss_pred             CCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC-----------CEEE------
Confidence            46899999998765   358889999999999999999999999999999996655543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          ...    
T Consensus       160 ------~Dfg~~~~~----------------------------------------------------------~~~----  171 (329)
T PTZ00263        160 ------TDFGFAKKV----------------------------------------------------------PDR----  171 (329)
T ss_pred             ------eeccCceEc----------------------------------------------------------CCC----
Confidence                  778776510                                                          000    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        ...                          ..|++.++|||++....++.++|+|||||++|||++ |..||...+..+
T Consensus       172 --~~~--------------------------~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~  222 (329)
T PTZ00263        172 --TFT--------------------------LCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIA-GYPPFFDDTPFR  222 (329)
T ss_pred             --cce--------------------------ecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHc-CCCCCCCCCHHH
Confidence              000                          113445566777777788999999999999999999 999998877766


Q ss_pred             eccccccc
Q psy17476        241 VVDRVQRG  248 (513)
Q Consensus       241 ~~~~i~~~  248 (513)
                      +...+..+
T Consensus       223 ~~~~i~~~  230 (329)
T PTZ00263        223 IYEKILAG  230 (329)
T ss_pred             HHHHHhcC
Confidence            66666544

>PHA02988 hypothetical protein; Provisional

Probab=99.79  E-value=2.7e-20  Score=184.52  Aligned_cols=158  Identities=23%  Similarity=0.371  Sum_probs=115.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhc-ceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERH-NYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~-~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.+++.+..   .+++.....++.|++.||.|||+. +++||||||+||+++.++           ..|+     
T Consensus       104 ~~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~-----------~~kl-----  164 (283)
T PHA02988        104 CTRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY-----------KLKI-----  164 (283)
T ss_pred             CCCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC-----------cEEE-----
Confidence            47899999998764   357889999999999999999984 899999999995554443           4455     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||+++....                                                            ..
T Consensus       165 -------~dfg~~~~~~~------------------------------------------------------------~~  177 (283)
T PHA02988        165 -------ICHGLEKILSS------------------------------------------------------------PP  177 (283)
T ss_pred             -------cccchHhhhcc------------------------------------------------------------cc
Confidence                   77887651000                                                            00


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                          ....|+..|+|||++..                        ....|+.++|||||||++|||++ |..||...+..
T Consensus       178 ----~~~~~~~~y~aPE~~~~------------------------~~~~~~~k~Di~SlGvil~el~~-g~~Pf~~~~~~  228 (283)
T PHA02988        178 ----FKNVNFMVYFSYKMLND------------------------IFSEYTIKDDIYSLGVVLWEIFT-GKIPFENLTTK  228 (283)
T ss_pred             ----ccccCcccccCHHHhhh------------------------ccccccchhhhhHHHHHHHHHHH-CCCCCCCCCHH
Confidence                00124455566555421                        11468999999999999999999 99999988777


Q ss_pred             eeccccc-cccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQ-RGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~-~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++...+. .+.+++.|            +||..++..||++.+++..
T Consensus       229 ~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~  275 (283)
T PHA02988        229 EIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYN  275 (283)
T ss_pred             HHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            7766663 33333333            5899999999999998864

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.79  E-value=7.1e-20  Score=189.36  Aligned_cols=56  Identities=18%  Similarity=0.186  Sum_probs=48.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||+|||+++|+||||||+|||++.++
T Consensus        83 ~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~  138 (381)
T cd05626          83 IPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDG  138 (381)
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCC
Confidence            47899999998865   368889999999999999999999999999999996665543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=2.8e-20  Score=185.10  Aligned_cols=131  Identities=20%  Similarity=0.287  Sum_probs=98.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   .+++..+..++.|++.||+|||++||+||||||+|||++.++           ..++      
T Consensus        83 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~-----------~~kl------  142 (291)
T cd05612          83 VPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG-----------HIKL------  142 (291)
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC-----------CEEE------
Confidence            46899999998765   468889999999999999999999999999999996655543           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          ..  .  
T Consensus       143 ------~Dfg~~~~~----------------------------------------------------------~~--~--  154 (291)
T cd05612         143 ------TDFGFAKKL----------------------------------------------------------RD--R--  154 (291)
T ss_pred             ------EecCcchhc----------------------------------------------------------cC--C--
Confidence                  677766510                                                          00  0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        .....|                          ++.++|||++....++.++||||+||++|||++ |..||...+..+
T Consensus       155 --~~~~~g--------------------------t~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~  205 (291)
T cd05612         155 --TWTLCG--------------------------TPEYLAPEVIQSKGHNKAVDWWALGILIYEMLV-GYPPFFDDNPFG  205 (291)
T ss_pred             --cccccC--------------------------ChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence              000113                          344556666666778999999999999999999 999998877776


Q ss_pred             eccccccc
Q psy17476        241 VVDRVQRG  248 (513)
Q Consensus       241 ~~~~i~~~  248 (513)
                      +...+..+
T Consensus       206 ~~~~i~~~  213 (291)
T cd05612         206 IYEKILAG  213 (291)
T ss_pred             HHHHHHhC
Confidence            66666544

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.79  E-value=3.3e-20  Score=187.22  Aligned_cols=134  Identities=16%  Similarity=0.292  Sum_probs=98.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        78 ~~~g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~-----------~~kL------  137 (320)
T cd05590          78 VNGGDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG-----------HCKL------  137 (320)
T ss_pred             CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC-----------cEEE------
Confidence            46899999998765   368899999999999999999999999999999996665554           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                .+.            
T Consensus       138 ------~DfG~~~~~~~------------------------------------------------~~~------------  151 (320)
T cd05590         138 ------ADFGMCKEGIF------------------------------------------------NGK------------  151 (320)
T ss_pred             ------eeCCCCeecCc------------------------------------------------CCC------------
Confidence                  77877651000                                                000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+                          +.+||||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       152 -~~~~~~gt--------------------------~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~Pf~~~~~~~  203 (320)
T cd05590         152 -TTSTFCGT--------------------------PDYIAPEILQEMLYGPSVDWWAMGVLLYEMLC-GHAPFEAENEDD  203 (320)
T ss_pred             -cccccccC--------------------------ccccCHHHHcCCCCCCccchhhhHHHHHHHhh-CCCCCCCCCHHH
Confidence             00011233                          34455666666678999999999999999999 999999888777


Q ss_pred             eccccccc
Q psy17476        241 VVDRVQRG  248 (513)
Q Consensus       241 ~~~~i~~~  248 (513)
                      +...+.++
T Consensus       204 ~~~~i~~~  211 (320)
T cd05590         204 LFEAILND  211 (320)
T ss_pred             HHHHHhcC
Confidence            77666544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0660|consensus

Probab=99.79  E-value=1.9e-20  Score=181.31  Aligned_cols=131  Identities=20%  Similarity=0.342  Sum_probs=98.9

Q ss_pred             CcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccccc
Q psy17476          4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKA   83 (513)
Q Consensus         4 g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   83 (513)
                      -||.+.|+...   .++.+.+..++.|++.||.|+|+.+|+||||||+|+|++.+.           ..||         
T Consensus       110 tDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c-----------~lKI---------  166 (359)
T KOG0660|consen  110 TDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADC-----------DLKI---------  166 (359)
T ss_pred             hHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCC-----------CEEe---------
Confidence            47888888765   478999999999999999999999999999999997777664           2356         


Q ss_pred             cCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceee
Q psy17476         84 IEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKV  163 (513)
Q Consensus        84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  163 (513)
                         +||||++...-                                                          .       
T Consensus       167 ---~DFGLAR~~~~----------------------------------------------------------~-------  178 (359)
T KOG0660|consen  167 ---CDFGLARYLDK----------------------------------------------------------F-------  178 (359)
T ss_pred             ---ccccceeeccc----------------------------------------------------------c-------
Confidence               89999982100                                                          0       


Q ss_pred             ecCCC-ccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        164 KDKNG-SVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       164 ~~~~g-~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                       ...+ -.+|++..|++.++.                   ++....|+.+.||||.||++.||++ |++.|.+.+.-+.+
T Consensus       179 -~~~~~mTeYVaTRWYRAPEl-------------------ll~~~~Yt~aiDiWSvGCI~AEmL~-gkplFpG~d~v~Ql  237 (359)
T KOG0660|consen  179 -FEDGFMTEYVATRWYRAPEL-------------------LLNSSEYTKAIDIWSVGCILAEMLT-GKPLFPGKDYVHQL  237 (359)
T ss_pred             -CcccchhcceeeeeecCHHH-------------------HhccccccchhhhhhhhHHHHHHHc-CCCCCCCCchHHHH
Confidence             0001 245666666554332                   1446789999999999999999999 99999988876665


Q ss_pred             cccc
Q psy17476        243 DRVQ  246 (513)
Q Consensus       243 ~~i~  246 (513)
                      +.|.
T Consensus       238 ~lI~  241 (359)
T KOG0660|consen  238 QLIL  241 (359)
T ss_pred             HHHH
Confidence            5554

>KOG0984|consensus

Probab=99.79  E-value=3.6e-20  Score=166.07  Aligned_cols=142  Identities=22%  Similarity=0.328  Sum_probs=96.5

Q ss_pred             cHHHHHHh-cCCCCCCchhHHHHHHHHHHHHHHHHHhc-ceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          5 SLLNYLRR-HENTLGGNVGLLLDMCIQVCKGMAYLERH-NYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         5 ~L~~~l~~-~~~~~~~~~~~~~~~~~qi~~gl~ylH~~-~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      ||..|-++ -.....+++..+-+||..|+.||.|||++ .+||||+||+||||+.+|..           |+        
T Consensus       130 Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqV-----------Ki--------  190 (282)
T KOG0984|consen  130 SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQV-----------KI--------  190 (282)
T ss_pred             hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcE-----------EE--------
Confidence            45555444 12222479999999999999999999997 79999999999888888753           34        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          +|||.+- -.++..+++                                                           
T Consensus       191 ----CDFGIsG-~L~dSiAkt-----------------------------------------------------------  206 (282)
T KOG0984|consen  191 ----CDFGISG-YLVDSIAKT-----------------------------------------------------------  206 (282)
T ss_pred             ----cccccce-eehhhhHHH-----------------------------------------------------------
Confidence                7887763 111100000                                                           


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC-ccee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~-~~~~  241 (513)
                        -..|-..|+|||.+.+.                      +++..|+.++||||+|+++.||.+ ++.||+.+. +.+.
T Consensus       207 --~daGCkpYmaPEri~~e----------------------~n~~gY~vksDvWSLGItmiElA~-lr~PY~~w~tpF~q  261 (282)
T KOG0984|consen  207 --MDAGCKPYMAPERINPE----------------------LNQKGYSVKSDVWSLGITMIEMAI-LRFPYESWGTPFQQ  261 (282)
T ss_pred             --HhcCCCccCChhhcCcc----------------------cCcccceeehhhhhhhhhhhhhhh-ccccccccCCHHHH
Confidence              01244556666554332                      456689999999999999999999 999998764 4555


Q ss_pred             ccccccccccCCC
Q psy17476        242 VDRVQRGIILEKP  254 (513)
Q Consensus       242 ~~~i~~~~~~~~p  254 (513)
                      +..|-+...+..|
T Consensus       262 LkqvVeep~P~Lp  274 (282)
T KOG0984|consen  262 LKQVVEEPSPQLP  274 (282)
T ss_pred             HHHHhcCCCCCCc
Confidence            5555444333333

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.79  E-value=4.1e-20  Score=186.71  Aligned_cols=133  Identities=17%  Similarity=0.318  Sum_probs=99.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        83 ~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~-----------~~kL------  142 (323)
T cd05616          83 VNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG-----------HIKI------  142 (323)
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC-----------cEEE------
Confidence            46899999998765   358889999999999999999999999999999996665554           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                          ...  
T Consensus       143 ------~DfG~~~~~~~----------------------------------------------------------~~~--  156 (323)
T cd05616         143 ------ADFGMCKENMW----------------------------------------------------------DGV--  156 (323)
T ss_pred             ------ccCCCceecCC----------------------------------------------------------CCC--
Confidence                  78887651000                                                          000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       .....                          .|++.+||||++....++.++|+|||||++|||++ |..||...+..+
T Consensus       157 -~~~~~--------------------------~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~Pf~~~~~~~  208 (323)
T cd05616         157 -TTKTF--------------------------CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDE  208 (323)
T ss_pred             -ccccC--------------------------CCChhhcCHHHhcCCCCCCccchhchhHHHHHHHh-CCCCCCCCCHHH
Confidence             00011                          13445566677777788999999999999999999 999999887777


Q ss_pred             ecccccc
Q psy17476        241 VVDRVQR  247 (513)
Q Consensus       241 ~~~~i~~  247 (513)
                      +...+..
T Consensus       209 ~~~~i~~  215 (323)
T cd05616         209 LFQSIME  215 (323)
T ss_pred             HHHHHHh
Confidence            7666654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.79  E-value=3e-20  Score=197.72  Aligned_cols=164  Identities=18%  Similarity=0.241  Sum_probs=117.6

Q ss_pred             CCCCcHHHHHHhc-CCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRH-ENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.++|++. ....++++..+..++.||+.||+|||+++||||||||+|||++.++           ..++     
T Consensus       147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~-----------~~kL-----  210 (478)
T PTZ00267        147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG-----------IIKL-----  210 (478)
T ss_pred             CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCC-----------cEEE-----
Confidence            5789999999763 2333578899999999999999999999999999999996555443           3445     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||+++...                                                 ..        ..  
T Consensus       211 -------~DFgla~~~~-------------------------------------------------~~--------~~--  224 (478)
T PTZ00267        211 -------GDFGFSKQYS-------------------------------------------------DS--------VS--  224 (478)
T ss_pred             -------EeCcCceecC-------------------------------------------------Cc--------cc--
Confidence                   7888775100                                                 00        00  


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                      ........|+.+|+|                          ||++....++.++||||+||++|||++ |..||...+..
T Consensus       225 ~~~~~~~~gt~~y~a--------------------------PE~~~~~~~~~~~Dv~slG~~l~el~t-g~~Pf~~~~~~  277 (478)
T PTZ00267        225 LDVASSFCGTPYYLA--------------------------PELWERKRYSKKADMWSLGVILYELLT-LHRPFKGPSQR  277 (478)
T ss_pred             cccccccCCCccccC--------------------------HhHhCCCCCCcHHhHHHHHHHHHHHHh-CCCCCCCCCHH
Confidence            000011224444554                          555555678999999999999999999 99999887777


Q ss_pred             eeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +++..+..+...+.|            .||..++..|+++.+++.+
T Consensus       278 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        278 EIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT  323 (478)
T ss_pred             HHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence            777766555443332            4788889999999988764

>KOG0594|consensus

Probab=99.79  E-value=3e-20  Score=180.26  Aligned_cols=145  Identities=21%  Similarity=0.281  Sum_probs=104.2

Q ss_pred             CcHHHHHHhcCCC-CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          4 GSLLNYLRRHENT-LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         4 g~L~~~l~~~~~~-~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      -+|.+||...... -+++...++.+++|++.||+|||+++|+||||||.||||+.+|           ..|+        
T Consensus       101 ~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G-----------~lKl--------  161 (323)
T KOG0594|consen  101 RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSG-----------VLKL--------  161 (323)
T ss_pred             ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCC-----------cEee--------
Confidence            4788888886632 2467789999999999999999999999999999996666655           3355        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          +|||+++--.+.                                                                
T Consensus       162 ----aDFGlAra~~ip----------------------------------------------------------------  173 (323)
T KOG0594|consen  162 ----ADFGLARAFSIP----------------------------------------------------------------  173 (323)
T ss_pred             ----eccchHHHhcCC----------------------------------------------------------------
Confidence                899988711000                                                                


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc-ccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY-TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                             .....+|++.              .|  +.+||++.. +.|+..+||||+||++.||++ ++..|++.+..+.
T Consensus       174 -------~~~yt~evvT--------------lW--YRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~-~~~LFpG~se~~q  229 (323)
T KOG0594|consen  174 -------MRTYTPEVVT--------------LW--YRAPEVLLGSTSYSTSVDIWSLGCIFAEMFT-RRPLFPGDSEIDQ  229 (323)
T ss_pred             -------cccccccEEE--------------ee--ccCHHHhcCCCcCCCCcchHhHHHHHHHHHh-CCCCCCCCcHHHH
Confidence                   0001111110              00  245555554 479999999999999999999 9999999888777


Q ss_pred             ccccccccccCCCCCcCC
Q psy17476        242 VDRVQRGIILEKPKAWYV  259 (513)
Q Consensus       242 ~~~i~~~~~~~~p~~w~~  259 (513)
                      +.+|-+....|..+.|..
T Consensus       230 l~~If~~lGtP~e~~Wp~  247 (323)
T KOG0594|consen  230 LFRIFRLLGTPNEKDWPG  247 (323)
T ss_pred             HHHHHHHcCCCCccCCCC
Confidence            777766666666666743

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.79  E-value=4.3e-20  Score=186.03  Aligned_cols=133  Identities=18%  Similarity=0.319  Sum_probs=97.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        78 ~~gg~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~-----------~~kL------  137 (316)
T cd05592          78 LNGGDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG-----------HIKI------  137 (316)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC-----------CEEE------
Confidence            46899999998765   358889999999999999999999999999999996655543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                 +        . .  
T Consensus       138 ------~Dfg~a~~~~~-------------------------------------------------~--------~-~--  151 (316)
T cd05592         138 ------ADFGMCKENMN-------------------------------------------------G--------E-G--  151 (316)
T ss_pred             ------ccCcCCeECCC-------------------------------------------------C--------C-C--
Confidence                  78887651000                                                 0        0 0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+.                          .+|+||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       152 -~~~~~~gt~--------------------------~y~aPE~~~~~~~~~~~DvwslG~il~ell~-G~~Pf~~~~~~~  203 (316)
T cd05592         152 -KASTFCGTP--------------------------DYIAPEILKGQKYNESVDWWSFGVLLYEMLI-GQSPFHGEDEDE  203 (316)
T ss_pred             -ccccccCCc--------------------------cccCHHHHcCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCHHH
Confidence             000112333                          4455666666678999999999999999999 999998877766


Q ss_pred             ecccccc
Q psy17476        241 VVDRVQR  247 (513)
Q Consensus       241 ~~~~i~~  247 (513)
                      +...+..
T Consensus       204 ~~~~i~~  210 (316)
T cd05592         204 LFDSILN  210 (316)
T ss_pred             HHHHHHc
Confidence            6665543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.79  E-value=7.1e-20  Score=185.61  Aligned_cols=56  Identities=9%  Similarity=0.037  Sum_probs=48.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.++.   .+++..++.++.||+.||+|||+++|+||||||+|||++.++
T Consensus        87 ~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~  142 (332)
T cd05614          87 VSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG  142 (332)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC
Confidence            46899999998765   368899999999999999999999999999999996665544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.79  E-value=6.7e-20  Score=181.08  Aligned_cols=165  Identities=25%  Similarity=0.497  Sum_probs=118.2

Q ss_pred             CCCCcHHHHHHhcCCC-------------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHENT-------------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~-------------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.+++.++...             ..+++..+..++.|++.||+|||+++|+||||||+||+++.++        
T Consensus        90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~--------  161 (283)
T cd05048          90 LAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGL--------  161 (283)
T ss_pred             CCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCC--------
Confidence            4689999999875321             2467889999999999999999999999999999996555443        


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                         ..++            .|||+++...                                                 .+
T Consensus       162 ---~~~L------------~dfg~~~~~~-------------------------------------------------~~  177 (283)
T cd05048         162 ---TVKI------------SDFGLSRDIY-------------------------------------------------SA  177 (283)
T ss_pred             ---cEEE------------CCCcceeecc-------------------------------------------------cc
Confidence               3344            7787765100                                                 00


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                      +...          ......++.                          .+||||++....++.++|+|||||++|||++
T Consensus       178 ~~~~----------~~~~~~~~~--------------------------~y~aPE~~~~~~~~~~sDv~slG~il~el~~  221 (283)
T cd05048         178 DYYR----------VQSKSLLPV--------------------------RWMPPEAILYGKFTTESDIWSFGVVLWEIFS  221 (283)
T ss_pred             cccc----------ccCCCcccc--------------------------cccCHHHhccCcCchhhhHHHHHHHHHHHHc
Confidence            0000          000001122                          3455666666678999999999999999998


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .|..||...+..++...+.++...+.|            +||..++..||.+.+++..
T Consensus       222 ~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         222 YGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            899999988888887777665544433            5899999999999998754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.79  E-value=1.2e-19  Score=182.80  Aligned_cols=133  Identities=22%  Similarity=0.305  Sum_probs=96.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        80 ~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----------~~kL------  139 (318)
T cd05582          80 LRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG-----------HIKL------  139 (318)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC-----------cEEE------
Confidence            46899999998754   468999999999999999999999999999999996655543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                         ....   
T Consensus       140 ------~Dfg~~~~~~---------------------------------------------------------~~~~---  153 (318)
T cd05582         140 ------TDFGLSKESI---------------------------------------------------------DHEK---  153 (318)
T ss_pred             ------eeccCCcccC---------------------------------------------------------CCCC---
Confidence                  6777665100                                                         0000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+.                          .+|+||++....++.++|+|||||++|||++ |+.||...+..+
T Consensus       154 -~~~~~~g~~--------------------------~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~  205 (318)
T cd05582         154 -KAYSFCGTV--------------------------EYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GSLPFQGKDRKE  205 (318)
T ss_pred             -ceecccCCh--------------------------hhcCHHHHcCCCCCCccceeccceEeeeecc-CCCCCCCCCHHH
Confidence             000112343                          4455555666678999999999999999999 999998877666


Q ss_pred             ecccccc
Q psy17476        241 VVDRVQR  247 (513)
Q Consensus       241 ~~~~i~~  247 (513)
                      ....+.+
T Consensus       206 ~~~~i~~  212 (318)
T cd05582         206 TMTMILK  212 (318)
T ss_pred             HHHHHHc
Confidence            6655543

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.79  E-value=5.2e-20  Score=186.00  Aligned_cols=159  Identities=18%  Similarity=0.289  Sum_probs=108.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|..++.+..   .+++..++.++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        77 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-----------~~kL------  136 (323)
T cd05595          77 ANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG-----------HIKI------  136 (323)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC-----------CEEe------
Confidence            57899999998765   368899999999999999999999999999999996555443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...-                                                ..          .  
T Consensus       137 ------~Dfg~~~~~~~------------------------------------------------~~----------~--  150 (323)
T cd05595         137 ------TDFGLCKEGIS------------------------------------------------DG----------A--  150 (323)
T ss_pred             ------cccHHhccccC------------------------------------------------CC----------C--
Confidence                  77877651000                                                00          0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|++|                          |++....++.++|+|||||++|||++ |..||...+..+
T Consensus       151 -~~~~~~gt~~y~aP--------------------------E~~~~~~~~~~~DiwSlGvil~ell~-g~~Pf~~~~~~~  202 (323)
T cd05595         151 -TMKTFCGTPEYLAP--------------------------EVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHER  202 (323)
T ss_pred             -ccccccCCcCcCCc--------------------------ccccCCCCCchhchhhhHHHHHHHHh-CCCCCCCCCHHH
Confidence             00111244455555                          44555578999999999999999999 999998777666


Q ss_pred             eccccccccc-cCCC----------CCcCCCCCCHH-----HHHHHHcC
Q psy17476        241 VVDRVQRGII-LEKP----------KAWYVGDMSRQ-----RAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~-~~~p----------~~w~~~~~~R~-----~aeeLL~~  273 (513)
                      ....+..... .+..          .||..++..|+     .+.+++.+
T Consensus       203 ~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         203 LFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             HHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence            5555432221 1111          35555666665     56666654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.79  E-value=7.5e-20  Score=179.56  Aligned_cols=165  Identities=27%  Similarity=0.504  Sum_probs=117.5

Q ss_pred             CCCCcHHHHHHhcC---CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEE
Q psy17476          1 MRHGSLLNYLRRHE---NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVA   77 (513)
Q Consensus         1 ~~~g~L~~~l~~~~---~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~   77 (513)
                      |++|+|.+++....   ....+++..+..++.|++.||+|||+++|+||||||+|||++.+           ...++   
T Consensus        88 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~-----------~~~kl---  153 (272)
T cd05075          88 MKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNEN-----------MNVCV---  153 (272)
T ss_pred             CCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCC-----------CCEEE---
Confidence            56899999985422   22246889999999999999999999999999999999655443           33455   


Q ss_pred             eccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCC
Q psy17476         78 LYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ  157 (513)
Q Consensus        78 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  157 (513)
                               .|||+++...                                                 .+...       
T Consensus       154 ---------~Dfg~~~~~~-------------------------------------------------~~~~~-------  168 (272)
T cd05075         154 ---------ADFGLSKKIY-------------------------------------------------NGDYY-------  168 (272)
T ss_pred             ---------CCCCcccccC-------------------------------------------------cccce-------
Confidence                     7888776100                                                 00000       


Q ss_pred             ccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC
Q psy17476        158 EHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK  237 (513)
Q Consensus       158 ~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~  237 (513)
                              ..+.....                     .+.+++||++....++.++|+|||||++|||++.|..||....
T Consensus       169 --------~~~~~~~~---------------------~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~  219 (272)
T cd05075         169 --------RQGRIAKM---------------------PVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE  219 (272)
T ss_pred             --------ecCCcccC---------------------CcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence                    00111111                     1234567777777889999999999999999986889998877


Q ss_pred             cceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 NTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..++.+.+.++.+++.+            +||..++..||++.+++..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         220 NSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            77777777665544332            5888999999999988754

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.79  E-value=2.1e-19  Score=182.05  Aligned_cols=140  Identities=16%  Similarity=0.250  Sum_probs=98.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++..  .+++..++.++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        83 ~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~-----------~~kL------  143 (330)
T cd05601          83 QPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTG-----------HIKL------  143 (330)
T ss_pred             CCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCC-----------CEEe------
Confidence            468999999998744  368889999999999999999999999999999996655543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                 ....           
T Consensus       144 ------~Dfg~a~~~~-------------------------------------------------~~~~-----------  157 (330)
T cd05601         144 ------ADFGSAARLT-------------------------------------------------ANKM-----------  157 (330)
T ss_pred             ------ccCCCCeECC-------------------------------------------------CCCc-----------
Confidence                  7888765100                                                 0000           


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+..|+|||++.....                    .....++.++||||+||++|||++ |..||...+..+
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~--------------------~~~~~~~~~~DiwslG~il~el~~-g~~Pf~~~~~~~  216 (330)
T cd05601         158 VNSKLPVGTPDYIAPEVLTTMNG--------------------DGKGTYGVECDWWSLGVIAYEMIY-GRSPFHEGTSAK  216 (330)
T ss_pred             eeeecccCCccccCHHHhccccc--------------------cccCCCCCcceeecccceeeeecc-CCCCCCCCCHHH
Confidence            00011235666666666542210                    013457899999999999999999 999998776655


Q ss_pred             eccccc
Q psy17476        241 VVDRVQ  246 (513)
Q Consensus       241 ~~~~i~  246 (513)
                      ....+.
T Consensus       217 ~~~~i~  222 (330)
T cd05601         217 TYNNIM  222 (330)
T ss_pred             HHHHHH
Confidence            555543

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.79  E-value=2.8e-20  Score=181.83  Aligned_cols=163  Identities=26%  Similarity=0.418  Sum_probs=117.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++|+.+... .+++..+..|+.|||.||+|||+++|+|+||+|+||+++.++           .+|+      
T Consensus        83 ~~~g~L~~~L~~~~~~-~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~-----------~~Kl------  144 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKE-PLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNG-----------QVKL------  144 (259)
T ss_dssp             -TTEBHHHHHHHTCTT-TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTT-----------EEEE------
T ss_pred             cccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccc-----------cccc------
Confidence            4689999999998322 468899999999999999999999999999999995555443           4455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +||++++-.                                                 ..              
T Consensus       145 ------~~f~~~~~~-------------------------------------------------~~--------------  155 (259)
T PF07714_consen  145 ------SDFGLSRPI-------------------------------------------------SE--------------  155 (259)
T ss_dssp             ------ESTTTGEET-------------------------------------------------TT--------------
T ss_pred             ------ccccccccc-------------------------------------------------cc--------------
Confidence                  677766400                                                 00              


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                             .........               ......+++||++....++.++||||||+++||+++.|..||...+..+
T Consensus       156 -------~~~~~~~~~---------------~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~  213 (259)
T PF07714_consen  156 -------KSKYKNDSS---------------QQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE  213 (259)
T ss_dssp             -------SSSEEESTT---------------SESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH
T ss_pred             -------ccccccccc---------------ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                   000000000               0012245677777777899999999999999999997789999888888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+.++.+++.+            .||..++..||++.+++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  214 IIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             ccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            88888777776554            589999999999999874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.78  E-value=8.1e-20  Score=184.55  Aligned_cols=133  Identities=19%  Similarity=0.262  Sum_probs=96.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   .+++..++.++.||+.||+|||++||+||||||+|||++.++           ..++      
T Consensus        78 ~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~-----------~~kl------  137 (323)
T cd05575          78 VNGGELFFHLQRER---SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG-----------HVVL------  137 (323)
T ss_pred             CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC-----------cEEE------
Confidence            46899999998764   358889999999999999999999999999999996655543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                         ....   
T Consensus       138 ------~Dfg~~~~~~---------------------------------------------------------~~~~---  151 (323)
T cd05575         138 ------TDFGLCKEGI---------------------------------------------------------EHSK---  151 (323)
T ss_pred             ------eccCCCcccc---------------------------------------------------------cCCC---
Confidence                  7787765100                                                         0000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..                          +|+||++....++.++|+|||||++|||++ |..||...+..+
T Consensus       152 -~~~~~~gt~~--------------------------y~aPE~~~~~~~~~~~DvwslG~il~ell~-g~~pf~~~~~~~  203 (323)
T cd05575         152 -TTSTFCGTPE--------------------------YLAPEVLRKQPYDRTVDWWCLGAVLYEMLY-GLPPFYSRDTAE  203 (323)
T ss_pred             -ccccccCChh--------------------------hcChhhhcCCCCCccccccccchhhhhhhc-CCCCCCCCCHHH
Confidence             0001123444                          455555566678999999999999999999 999998877666


Q ss_pred             ecccccc
Q psy17476        241 VVDRVQR  247 (513)
Q Consensus       241 ~~~~i~~  247 (513)
                      +.+.+..
T Consensus       204 ~~~~i~~  210 (323)
T cd05575         204 MYDNILN  210 (323)
T ss_pred             HHHHHHc
Confidence            6655543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.78  E-value=6.6e-20  Score=178.89  Aligned_cols=164  Identities=27%  Similarity=0.513  Sum_probs=117.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++..+..  .+++..++.++.|++.||+|||+++++||||||+||+++.+           ...++      
T Consensus        76 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~-----------~~~kl------  136 (257)
T cd05115          76 ASGGPLNKFLSGKKD--EITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQ-----------HYAKI------  136 (257)
T ss_pred             CCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCC-----------CcEEe------
Confidence            468999999987544  35888999999999999999999999999999999655443           23444      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                 .++          ..
T Consensus       137 ------~dfg~~~~~~-------------------------------------------------~~~----------~~  151 (257)
T cd05115         137 ------SDFGLSKALG-------------------------------------------------ADD----------SY  151 (257)
T ss_pred             ------ccCCcccccc-------------------------------------------------CCc----------cc
Confidence                  7777765100                                                 000          00


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .... ..+                        ++...+++||++....++.++|+|||||++||++++|..||......+
T Consensus       152 ~~~~-~~~------------------------~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  206 (257)
T cd05115         152 YKAR-SAG------------------------KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE  206 (257)
T ss_pred             eecc-CCC------------------------CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence            0000 000                        011234556666666789999999999999999976999999888877


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++.+++.|            +||..++..||.+.++...
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~  251 (257)
T cd05115         207 VMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEER  251 (257)
T ss_pred             HHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            77777776655443            5888888999988887653

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.78  E-value=2.5e-19  Score=183.85  Aligned_cols=168  Identities=16%  Similarity=0.207  Sum_probs=103.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   .+++..++.++.|++.||+|||++||+||||||+|||++.++           ..++      
T Consensus        83 ~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~-----------~vkL------  142 (360)
T cd05627          83 LPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKG-----------HVKL------  142 (360)
T ss_pred             CCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC-----------CEEE------
Confidence            47899999998765   468889999999999999999999999999999996665554           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.....-...                        . .....  .....+..+.....        .  
T Consensus       143 ------~DfG~~~~~~~~~~~~------------------------~-~~~~~--~~~~~~~~~~~~~~--------~--  179 (360)
T cd05627         143 ------SDFGLCTGLKKAHRTE------------------------F-YRNLT--HNPPSDFSFQNMNS--------K--  179 (360)
T ss_pred             ------eeccCCcccccccccc------------------------c-ccccc--cCCccccccccccc--------c--
Confidence                  6777665210000000                        0 00000  00000000000000        0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                                  ...+......   .......-|++.+||||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       180 ------------~~~~~~~~~~---~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~t-G~~Pf~~~~~~~  243 (360)
T cd05627         180 ------------RKAETWKKNR---RQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI-GYPPFCSETPQE  243 (360)
T ss_pred             ------------cccccccccc---cccccccCCCccccCHHHHcCCCCCCcceeccccceeeeccc-CCCCCCCCCHHH
Confidence                        0000000000   000001236677788888888899999999999999999999 999998887776


Q ss_pred             ecccccc
Q psy17476        241 VVDRVQR  247 (513)
Q Consensus       241 ~~~~i~~  247 (513)
                      ....+..
T Consensus       244 ~~~~i~~  250 (360)
T cd05627         244 TYRKVMN  250 (360)
T ss_pred             HHHHHHc
Confidence            6666543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.78  E-value=8.1e-20  Score=184.58  Aligned_cols=159  Identities=20%  Similarity=0.271  Sum_probs=108.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~-----------~~kl------  141 (323)
T cd05584          82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG-----------HVKL------  141 (323)
T ss_pred             CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC-----------CEEE------
Confidence            46899999998765   357889999999999999999999999999999996655443           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                .+        .    
T Consensus       142 ------~Dfg~~~~~~~------------------------------------------------~~--------~----  155 (323)
T cd05584         142 ------TDFGLCKESIH------------------------------------------------EG--------T----  155 (323)
T ss_pred             ------eeCcCCeeccc------------------------------------------------CC--------C----
Confidence                  78887651000                                                00        0    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|||+                          +....++.++||||+||++|||++ |..||...+..+
T Consensus       156 -~~~~~~gt~~y~aPE~--------------------------~~~~~~~~~~DiwslG~il~ell~-G~~pf~~~~~~~  207 (323)
T cd05584         156 -VTHTFCGTIEYMAPEI--------------------------LMRSGHGKAVDWWSLGALMYDMLT-GAPPFTAENRKK  207 (323)
T ss_pred             -cccccCCCccccChhh--------------------------ccCCCCCCcceecccHHHHHHHhc-CCCCCCCCCHHH
Confidence             0011124555555554                          445567899999999999999999 999998877666


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHH-----HHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQ-----RAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~-----~aeeLL~~  273 (513)
                      ....+..+....++           +||..++..|+     .+++++.+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         208 TIDKILKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence            66665444322111           35555566665     55555544

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.78  E-value=6.2e-20  Score=184.90  Aligned_cols=133  Identities=17%  Similarity=0.327  Sum_probs=97.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   .+++..+..++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        78 ~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~-----------~~kl------  137 (316)
T cd05620          78 LNGGDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG-----------HIKI------  137 (316)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC-----------CEEe------
Confidence            46899999998764   358889999999999999999999999999999996655543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                 +         ..  
T Consensus       138 ------~Dfg~~~~~~~-------------------------------------------------~---------~~--  151 (316)
T cd05620         138 ------ADFGMCKENVF-------------------------------------------------G---------DN--  151 (316)
T ss_pred             ------CccCCCeeccc-------------------------------------------------C---------CC--
Confidence                  78887651000                                                 0         00  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+                          +.++|||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       152 -~~~~~~gt--------------------------~~y~aPE~~~~~~~~~~~DiwslGvil~el~~-g~~Pf~~~~~~~  203 (316)
T cd05620         152 -RASTFCGT--------------------------PDYIAPEILQGLKYTFSVDWWSFGVLLYEMLI-GQSPFHGDDEDE  203 (316)
T ss_pred             -ceeccCCC--------------------------cCccCHHHHcCCCCCcccchhhhHHHHHHHHh-CCCCCCCCCHHH
Confidence             00011233                          34455666666678999999999999999999 999998877766


Q ss_pred             ecccccc
Q psy17476        241 VVDRVQR  247 (513)
Q Consensus       241 ~~~~i~~  247 (513)
                      +.+.+..
T Consensus       204 ~~~~~~~  210 (316)
T cd05620         204 LFESIRV  210 (316)
T ss_pred             HHHHHHh
Confidence            6666543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=9e-20  Score=185.00  Aligned_cols=128  Identities=20%  Similarity=0.304  Sum_probs=95.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        83 ~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~-----------~~kL------  142 (333)
T cd05600          83 VPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG-----------HIKL------  142 (333)
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC-----------CEEE------
Confidence            57899999998764   368889999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                         .      
T Consensus       143 ------~Dfg~a~~~~---------------------------------------------------------~------  153 (333)
T cd05600         143 ------TDFGLSKGIV---------------------------------------------------------T------  153 (333)
T ss_pred             ------EeCcCCcccc---------------------------------------------------------c------
Confidence                  7777765100                                                         0      


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+||                          |++....++.++||||+||++|||++ |..||...+..+
T Consensus       154 -~~~~~~gt~~y~aP--------------------------E~~~~~~~~~~~DvwslG~il~ell~-g~~pf~~~~~~~  205 (333)
T cd05600         154 -YANSVVGSPDYMAP--------------------------EVLRGKGYDFTVDYWSLGCMLYEFLC-GFPPFSGSTPNE  205 (333)
T ss_pred             -ccCCcccCccccCh--------------------------hHhcCCCCCCccceecchHHHhhhhh-CCCCCCCCCHHH
Confidence             00111244555555                          44555578999999999999999999 999998877666


Q ss_pred             ecccc
Q psy17476        241 VVDRV  245 (513)
Q Consensus       241 ~~~~i  245 (513)
                      ....+
T Consensus       206 ~~~~i  210 (333)
T cd05600         206 TWENL  210 (333)
T ss_pred             HHHHH
Confidence            55444

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.78  E-value=8.6e-20  Score=182.00  Aligned_cols=162  Identities=30%  Similarity=0.549  Sum_probs=114.9

Q ss_pred             CCCCcHHHHHHhcCC-------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHEN-------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.+++.+...             ...+++..++.++.|++.||+|||+++|+||||||+|||++.+         
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~---------  155 (297)
T cd05089          85 APYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGEN---------  155 (297)
T ss_pred             cCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCC---------
Confidence            368999999987431             1136788999999999999999999999999999999554433         


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                        ...++            .|||++.+....                                                 
T Consensus       156 --~~~kl------------~dfg~~~~~~~~-------------------------------------------------  172 (297)
T cd05089         156 --LASKI------------ADFGLSRGEEVY-------------------------------------------------  172 (297)
T ss_pred             --CeEEE------------CCcCCCccccce-------------------------------------------------
Confidence              33455            788776521000                                                 


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                          .         .......+..|                          ++||++....++.++|||||||++|||++
T Consensus       173 ----~---------~~~~~~~~~~y--------------------------~aPE~~~~~~~~~~~DvwSlG~il~el~t  213 (297)
T cd05089         173 ----V---------KKTMGRLPVRW--------------------------MAIESLNYSVYTTKSDVWSFGVLLWEIVS  213 (297)
T ss_pred             ----e---------ccCCCCcCccc--------------------------cCchhhccCCCCchhhHHHHHHHHHHHHc
Confidence                0         00000011223                          45555566678999999999999999997


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .|..||......++...+.++...+.+            +||..++..||++++++..
T Consensus       214 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         214 LGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             CCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            799999887776666666555444333            5899999999999998654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.78  E-value=5.3e-20  Score=186.00  Aligned_cols=133  Identities=18%  Similarity=0.362  Sum_probs=97.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        83 ~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~-----------~~kL------  142 (324)
T cd05587          83 VNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG-----------HIKI------  142 (324)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCC-----------CEEE------
Confidence            46899999998765   358889999999999999999999999999999996655543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                               ...             
T Consensus       143 ------~Dfg~~~~~~~-----------------------------------------------~~~-------------  156 (324)
T cd05587         143 ------ADFGMCKENIF-----------------------------------------------GGK-------------  156 (324)
T ss_pred             ------eecCcceecCC-----------------------------------------------CCC-------------
Confidence                  77877651000                                               000             


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|||                          ++....++.++|+||+||++|||++ |+.||...+..+
T Consensus       157 -~~~~~~gt~~y~aPE--------------------------~~~~~~~~~~~DiwslGvil~ellt-G~~pf~~~~~~~  208 (324)
T cd05587         157 -TTRTFCGTPDYIAPE--------------------------IIAYQPYGKSVDWWAFGVLLYEMLA-GQPPFDGEDEDE  208 (324)
T ss_pred             -ceeeecCCccccChh--------------------------hhcCCCCCcccchhhhHHHHHHHHh-CCCCCCCCCHHH
Confidence             001122455555554                          4555577899999999999999999 999998877766


Q ss_pred             ecccccc
Q psy17476        241 VVDRVQR  247 (513)
Q Consensus       241 ~~~~i~~  247 (513)
                      +...+..
T Consensus       209 ~~~~i~~  215 (324)
T cd05587         209 LFQSIME  215 (324)
T ss_pred             HHHHHHc
Confidence            6666643

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0580|consensus

Probab=99.78  E-value=5e-20  Score=168.79  Aligned_cols=133  Identities=23%  Similarity=0.382  Sum_probs=105.7

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      ++|+|++.|...... .+++..+..+.+|+|.||.|+|..++|||||||+|           +|++.....|+       
T Consensus       105 ~~gel~k~L~~~~~~-~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpen-----------lLlg~~~~lki-------  165 (281)
T KOG0580|consen  105 PRGELYKDLQEGRMK-RFDEQRAATYIKQLANALLYCHLKRVIHRDIKPEN-----------LLLGSAGELKI-------  165 (281)
T ss_pred             CCchHHHHHHhcccc-cccccchhHHHHHHHHHHHHhccCCcccCCCCHHH-----------hccCCCCCeec-------
Confidence            579999999954332 35888999999999999999999999999999999           44444445566       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           +|||                 |.|+.+.+                                              
T Consensus       166 -----AdfG-----------------wsV~~p~~----------------------------------------------  177 (281)
T KOG0580|consen  166 -----ADFG-----------------WSVHAPSN----------------------------------------------  177 (281)
T ss_pred             -----cCCC-----------------ceeecCCC----------------------------------------------
Confidence                 7887                 33333221                                              


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      +.+..+||.-|.|||++.+                          ..++..+|+|++|++.||++. |.+||...+..++
T Consensus       178 kR~tlcgt~dyl~pEmv~~--------------------------~~hd~~Vd~w~lgvl~yeflv-g~ppFes~~~~et  230 (281)
T KOG0580|consen  178 KRKTLCGTLDYLPPEMVEG--------------------------RGHDKFVDLWSLGVLCYEFLV-GLPPFESQSHSET  230 (281)
T ss_pred             CceeeecccccCCHhhcCC--------------------------CCccchhhHHHHHHHHHHHHh-cCCchhhhhhHHH
Confidence            1244578999999887754                          367899999999999999999 9999999999889


Q ss_pred             ccccccc
Q psy17476        242 VDRVQRG  248 (513)
Q Consensus       242 ~~~i~~~  248 (513)
                      ..+|.+.
T Consensus       231 YkrI~k~  237 (281)
T KOG0580|consen  231 YKRIRKV  237 (281)
T ss_pred             HHHHHHc
Confidence            8888654

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.78  E-value=6.8e-20  Score=184.61  Aligned_cols=134  Identities=16%  Similarity=0.311  Sum_probs=98.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        78 ~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~-----------~~kl------  137 (316)
T cd05619          78 LNGGDLMFHIQSCH---KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDG-----------HIKI------  137 (316)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC-----------CEEE------
Confidence            47899999998754   357889999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                 +         ..  
T Consensus       138 ------~Dfg~~~~~~~-------------------------------------------------~---------~~--  151 (316)
T cd05619         138 ------ADFGMCKENML-------------------------------------------------G---------DA--  151 (316)
T ss_pred             ------ccCCcceECCC-------------------------------------------------C---------CC--
Confidence                  77877651000                                                 0         00  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+                          +.+||||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       152 -~~~~~~gt--------------------------~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-G~~pf~~~~~~~  203 (316)
T cd05619         152 -KTCTFCGT--------------------------PDYIAPEILLGQKYNTSVDWWSFGVLLYEMLI-GQSPFHGHDEEE  203 (316)
T ss_pred             -ceeeecCC--------------------------ccccCHHHHcCCCCCchhhhhhHHHHHHHHHh-CCCCCCCCCHHH
Confidence             00011233                          34455666666678999999999999999999 999998887777


Q ss_pred             eccccccc
Q psy17476        241 VVDRVQRG  248 (513)
Q Consensus       241 ~~~~i~~~  248 (513)
                      +...+...
T Consensus       204 ~~~~i~~~  211 (316)
T cd05619         204 LFQSIRMD  211 (316)
T ss_pred             HHHHHHhC
Confidence            76666543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.78  E-value=1.1e-19  Score=177.93  Aligned_cols=164  Identities=15%  Similarity=0.245  Sum_probs=106.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|..++.+...  .+++..+..++.||+.||+|||+++|+||||||+|||++.++...    ......++      
T Consensus        86 ~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~----~~~~~~~l------  153 (262)
T cd05077          86 VEFGPLDLFMHRKSD--VLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDG----ECGPFIKL------  153 (262)
T ss_pred             ccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccC----CCCceeEe------
Confidence            467899999887544  358889999999999999999999999999999997765543100    00000122      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++...                                                         .       
T Consensus       154 ------~d~g~~~~~---------------------------------------------------------~-------  163 (262)
T cd05077         154 ------SDPGIPITV---------------------------------------------------------L-------  163 (262)
T ss_pred             ------CCCCCCccc---------------------------------------------------------c-------
Confidence                  455554300                                                         0       


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcc-cccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLN-YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                       ......++..|+|||                          ++. ...++.++|||||||++|||++.|..||......
T Consensus       164 -~~~~~~~~~~y~aPE--------------------------~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~  216 (262)
T cd05077         164 -SRQECVERIPWIAPE--------------------------CVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA  216 (262)
T ss_pred             -CcccccccccccChh--------------------------hhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh
Confidence             000011333445544                          443 3467899999999999999985488998765543


Q ss_pred             eeccccccccccCCC----------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.............+          +||..++..||.+.+++..
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         217 EKERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             HHHHHHhcCccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            332222221111111          6899999999999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.78  E-value=8.3e-20  Score=181.18  Aligned_cols=130  Identities=18%  Similarity=0.309  Sum_probs=94.0

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++.+.... ++++..++.++.|++.||+|||+++|+||||||+|||++.++           ..++        
T Consensus        92 ~~~l~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~-----------~~kl--------  151 (290)
T cd07862          92 DQDLTTYLDKVPEP-GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-----------QIKL--------  151 (290)
T ss_pred             CCCHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCC-----------CEEE--------
Confidence            47899999876543 478899999999999999999999999999999996655543           3345        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++...                                                          .. .   .
T Consensus       152 ----~Dfg~~~~~~----------------------------------------------------------~~-~---~  165 (290)
T cd07862         152 ----ADFGLARIYS----------------------------------------------------------FQ-M---A  165 (290)
T ss_pred             ----ccccceEecc----------------------------------------------------------CC-c---c
Confidence                7888765100                                                          00 0   0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .....|+                          +.++|||++....++.++|+||+||++|||++ |.+||...+..+.+
T Consensus       166 ~~~~~~~--------------------------~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~~f~~~~~~~~~  218 (290)
T cd07862         166 LTSVVVT--------------------------LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQL  218 (290)
T ss_pred             ccccccc--------------------------ccccChHHHhCCCCCCccchHHHHHHHHHHHc-CCCCcCCCCHHHHH
Confidence            0001133                          34455666666678999999999999999999 99999877665554


Q ss_pred             ccc
Q psy17476        243 DRV  245 (513)
Q Consensus       243 ~~i  245 (513)
                      ..+
T Consensus       219 ~~i  221 (290)
T cd07862         219 GKI  221 (290)
T ss_pred             HHH
Confidence            444

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.78  E-value=1.1e-19  Score=177.64  Aligned_cols=163  Identities=32%  Similarity=0.514  Sum_probs=116.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++...... .+++..++.++.|++.||+|||+++++||||||+||+++.++           .+++      
T Consensus        84 ~~~~~L~~~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~-----------~~kl------  145 (263)
T cd05052          84 MTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH-----------LVKV------  145 (263)
T ss_pred             CCCCcHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC-----------cEEe------
Confidence            4689999999875433 468889999999999999999999999999999996654443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++...-                                                  ...          
T Consensus       146 ------~df~~~~~~~~--------------------------------------------------~~~----------  159 (263)
T cd05052         146 ------ADFGLSRLMTG--------------------------------------------------DTY----------  159 (263)
T ss_pred             ------CCCcccccccc--------------------------------------------------cee----------
Confidence                  77877651000                                                  000          


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......++.+                          +++||.+....++.++|+|||||++|||++.|..||...+..+
T Consensus       160 ~~~~~~~~~~~--------------------------y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~  213 (263)
T cd05052         160 TAHAGAKFPIK--------------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ  213 (263)
T ss_pred             eccCCCCCccc--------------------------cCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            00000001222                          4456666666789999999999999999987999998877777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+..+.+...+            +||..++..||++.+++..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~  258 (263)
T cd05052         214 VYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA  258 (263)
T ss_pred             HHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence            76666655444433            5788888899988887653

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.78  E-value=9.5e-20  Score=178.98  Aligned_cols=162  Identities=31%  Similarity=0.543  Sum_probs=114.2

Q ss_pred             CCCCcHHHHHHhcCC-------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHEN-------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.+++.+...             ...++++.++.++.|++.||+|||+++++||||||+||+++.++        
T Consensus        78 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~--------  149 (270)
T cd05047          78 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY--------  149 (270)
T ss_pred             CCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCC--------
Confidence            468999999987531             11367889999999999999999999999999999996555443        


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                         ..++            .|||++++....                                                 
T Consensus       150 ---~~kl------------~dfgl~~~~~~~-------------------------------------------------  165 (270)
T cd05047         150 ---VAKI------------ADFGLSRGQEVY-------------------------------------------------  165 (270)
T ss_pred             ---eEEE------------CCCCCccccchh-------------------------------------------------
Confidence               3445            788876521000                                                 


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                                   ........+.                          .+++||++....++.++|+|||||++|||++
T Consensus       166 -------------~~~~~~~~~~--------------------------~y~apE~~~~~~~~~~~Di~slG~il~el~~  206 (270)
T cd05047         166 -------------VKKTMGRLPV--------------------------RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS  206 (270)
T ss_pred             -------------hhccCCCCcc--------------------------ccCChHHHccCCCCchhhHHHHHHHHHHHHc
Confidence                         0000000111                          2455666666778999999999999999997


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .|..||...+..+....+..+.+.+.+            +||..++..||++.+++..
T Consensus       207 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  264 (270)
T cd05047         207 LGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  264 (270)
T ss_pred             CCCCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            699999877766666555444433322            5788888889988887753

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.78  E-value=1.1e-19  Score=183.83  Aligned_cols=132  Identities=18%  Similarity=0.239  Sum_probs=96.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||++||+||||||+|||++.++           ..++      
T Consensus        78 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~-----------~~kl------  137 (325)
T cd05602          78 INGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG-----------HIVL------  137 (325)
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC-----------CEEE------
Confidence            47899999998754   357889999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                         ....   
T Consensus       138 ------~DfG~a~~~~---------------------------------------------------------~~~~---  151 (325)
T cd05602         138 ------TDFGLCKENI---------------------------------------------------------EHNG---  151 (325)
T ss_pred             ------ccCCCCcccc---------------------------------------------------------cCCC---
Confidence                  7888765100                                                         0000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......                          |++.+||||++....++.++||||+||++|||++ |..||...+..+
T Consensus       152 -~~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~  203 (325)
T cd05602         152 -TTSTFC--------------------------GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY-GLPPFYSRNTAE  203 (325)
T ss_pred             -Cccccc--------------------------CCccccCHHHHcCCCCCCccccccccHHHHHHhc-CCCCCCCCCHHH
Confidence             000111                          3344556666666788999999999999999999 999998877766


Q ss_pred             eccccc
Q psy17476        241 VVDRVQ  246 (513)
Q Consensus       241 ~~~~i~  246 (513)
                      +...+.
T Consensus       204 ~~~~i~  209 (325)
T cd05602         204 MYDNIL  209 (325)
T ss_pred             HHHHHH
Confidence            665554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.77  E-value=3.4e-19  Score=180.20  Aligned_cols=134  Identities=17%  Similarity=0.228  Sum_probs=97.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|..++.+..   .+++..+..++.||+.||+|||++||+||||||+|||++.++           ..++      
T Consensus        78 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~-----------~~kL------  137 (325)
T cd05604          78 VNGGELFFHLQRER---SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG-----------HVVL------  137 (325)
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC-----------CEEE------
Confidence            46899999988754   468899999999999999999999999999999996655543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                         .. .  
T Consensus       138 ------~DfG~~~~~~~---------------------------------------------------------~~-~--  151 (325)
T cd05604         138 ------TDFGLCKEGIA---------------------------------------------------------QS-D--  151 (325)
T ss_pred             ------eecCCcccCCC---------------------------------------------------------CC-C--
Confidence                  77777651000                                                         00 0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|                          ++.+|+||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       152 -~~~~~~g--------------------------t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-G~~pf~~~~~~~  203 (325)
T cd05604         152 -TTTTFCG--------------------------TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLY-GLPPFYCRDVAE  203 (325)
T ss_pred             -CcccccC--------------------------ChhhCCHHHHcCCCCCCcCccccccceehhhhc-CCCCCCCCCHHH
Confidence             0000113                          344555666666778999999999999999999 999998877766


Q ss_pred             eccccccc
Q psy17476        241 VVDRVQRG  248 (513)
Q Consensus       241 ~~~~i~~~  248 (513)
                      +...+...
T Consensus       204 ~~~~~~~~  211 (325)
T cd05604         204 MYDNILHK  211 (325)
T ss_pred             HHHHHHcC
Confidence            66665443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.77  E-value=1.5e-19  Score=175.96  Aligned_cols=162  Identities=38%  Similarity=0.646  Sum_probs=117.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++++....  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        81 ~~~~~L~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~-----------~~kl------  141 (256)
T cd05114          81 MENGCLLNYLRQRQGK--LSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTG-----------VVKV------  141 (256)
T ss_pred             CCCCcHHHHHHhCccC--CCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCC-----------eEEE------
Confidence            3689999999875433  58889999999999999999999999999999996554432           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                 .....          
T Consensus       142 ------~d~g~~~~~~-------------------------------------------------~~~~~----------  156 (256)
T cd05114         142 ------SDFGMTRYVL-------------------------------------------------DDEYT----------  156 (256)
T ss_pred             ------CCCCCccccC-------------------------------------------------CCcee----------
Confidence                  6777665100                                                 00000          


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..                          +++||++....++.++|+||||+++|||++.|+.||...+..+
T Consensus       157 -~~~~~~~~~~--------------------------y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~  209 (256)
T cd05114         157 -SSSGAKFPVK--------------------------WSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE  209 (256)
T ss_pred             -ccCCCCCchh--------------------------hCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence             0000011223                          3455556666789999999999999999987899998888777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++.++..|            +||..++..||++.+++..
T Consensus       210 ~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~  254 (256)
T cd05114         210 VVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRA  254 (256)
T ss_pred             HHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            77777766555444            5899999999999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.77  E-value=1.2e-19  Score=178.79  Aligned_cols=165  Identities=18%  Similarity=0.262  Sum_probs=109.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|..++.+....  +++..+..++.|++.||+|||+++|+||||||+||+++..+.    ..+.....++      
T Consensus        98 ~~~g~L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~----~~~~~~~~kl------  165 (274)
T cd05076          98 VEHGPLDVCLRKEKGR--VPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGL----AEGTSPFIKL------  165 (274)
T ss_pred             CCCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCc----ccCccceeee------
Confidence            4789999999875543  578899999999999999999999999999999976655431    0011111122      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++...                                                         ..      
T Consensus       166 ------~d~g~~~~~---------------------------------------------------------~~------  176 (274)
T cd05076         166 ------SDPGVSFTA---------------------------------------------------------LS------  176 (274)
T ss_pred             ------cCCcccccc---------------------------------------------------------cc------
Confidence                  555544300                                                         00      


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        .....++..|++||.+..                         ...++.++|+|||||++||+++.|..||......+
T Consensus       177 --~~~~~~~~~~~aPe~~~~-------------------------~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~  229 (274)
T cd05076         177 --REERVERIPWIAPECVPG-------------------------GNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE  229 (274)
T ss_pred             --ccccccCCcccCchhhcC-------------------------CCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence              000113344555554321                         13578999999999999999644999998766554


Q ss_pred             eccccccccccCCC----------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+......+.+          +||...+..||++.++|..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         230 KERFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             HHHHHHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            44433333333322          5899999999999998864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=3.8e-19  Score=183.61  Aligned_cols=56  Identities=13%  Similarity=0.139  Sum_probs=48.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||+|||+++|+||||||+|||++.++
T Consensus        83 ~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~  138 (377)
T cd05629          83 LPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGG  138 (377)
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC
Confidence            46899999998764   368889999999999999999999999999999996665543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0611|consensus

Probab=99.77  E-value=1.3e-19  Score=176.74  Aligned_cols=138  Identities=22%  Similarity=0.361  Sum_probs=107.3

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .+|+|+||+.+.+   .+++..++.+++||++|+.|+|.++++|||||.+|           +|+|++-+.||       
T Consensus       136 S~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLEN-----------ILLD~N~NiKI-------  194 (668)
T KOG0611|consen  136 SGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLEN-----------ILLDQNNNIKI-------  194 (668)
T ss_pred             CCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhccceecccchhh-----------eeecCCCCeee-------
Confidence            5799999999987   47999999999999999999999999999999999           55666667788       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           +||||+.-                                                 +.++..            
T Consensus       195 -----ADFGLSNl-------------------------------------------------y~~~kf------------  208 (668)
T KOG0611|consen  195 -----ADFGLSNL-------------------------------------------------YADKKF------------  208 (668)
T ss_pred             -----eccchhhh-------------------------------------------------hccccH------------
Confidence                 89998750                                                 001000            


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                       ...++|++-|..||.+.      ..||.                   +..+|.||+|+++|-++. |.+||++.+..-+
T Consensus       209 -LqTFCGSPLYASPEIvN------G~PY~-------------------GPEVDsWsLGvLLYtLVy-GtMPFDG~Dhk~l  261 (668)
T KOG0611|consen  209 -LQTFCGSPLYASPEIVN------GTPYK-------------------GPEVDSWSLGVLLYTLVY-GTMPFDGRDHKRL  261 (668)
T ss_pred             -HHHhcCCcccCCccccC------CCCCC-------------------CCccchhhHHHHHHHHhh-cccccCCchHHHH
Confidence             02345666666665542      23333                   788999999999999997 9999999999999


Q ss_pred             ccccccccccCC
Q psy17476        242 VDRVQRGIILEK  253 (513)
Q Consensus       242 ~~~i~~~~~~~~  253 (513)
                      +..|..|..-.+
T Consensus       262 vrQIs~GaYrEP  273 (668)
T KOG0611|consen  262 VRQISRGAYREP  273 (668)
T ss_pred             HHHhhcccccCC
Confidence            999977744333

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.77  E-value=1.4e-19  Score=176.29  Aligned_cols=162  Identities=30%  Similarity=0.511  Sum_probs=115.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .++++.+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        77 ~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~-----------~~kl------  136 (257)
T cd05116          77 AELGPLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQH-----------YAKI------  136 (257)
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCC-----------eEEE------
Confidence            36799999998754   368889999999999999999999999999999996554432           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...-                                                          ... .
T Consensus       137 ------~Dfg~~~~~~~----------------------------------------------------------~~~-~  151 (257)
T cd05116         137 ------SDFGLSKALGA----------------------------------------------------------DEN-Y  151 (257)
T ss_pred             ------CCCccccccCC----------------------------------------------------------CCC-e
Confidence                  77877651000                                                          000 0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ...    .+.+                     .+...+++||++....++.++|+|||||++|||++.|..||...+..+
T Consensus       152 ~~~----~~~~---------------------~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  206 (257)
T cd05116         152 YKA----KTHG---------------------KWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE  206 (257)
T ss_pred             eee----cCCC---------------------CCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            000    0000                     011234556666666788999999999999999987999998887778


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +.+.+.++.+++.|            .||..++..||++..+..
T Consensus       207 ~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         207 VTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             HHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence            88888776655544            478888888888877654

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.77  E-value=1.9e-19  Score=180.10  Aligned_cols=162  Identities=31%  Similarity=0.559  Sum_probs=114.8

Q ss_pred             CCCCcHHHHHHhcCC-------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHEN-------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.+++++...             ...+++..++.++.|++.||+|||++||+||||||+|||++.+         
T Consensus        90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~---------  160 (303)
T cd05088          90 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN---------  160 (303)
T ss_pred             CCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCC---------
Confidence            468999999987531             1246888999999999999999999999999999999655443         


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                        ...++            .|||+++......                                                
T Consensus       161 --~~~kl------------~dfg~~~~~~~~~------------------------------------------------  178 (303)
T cd05088         161 --YVAKI------------ADFGLSRGQEVYV------------------------------------------------  178 (303)
T ss_pred             --CcEEe------------CccccCcccchhh------------------------------------------------
Confidence              23445            7888765110000                                                


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                                    ......++.                          .+++||++....++.++|+|||||++|||+|
T Consensus       179 --------------~~~~~~~~~--------------------------~y~aPE~~~~~~~~~~~Di~slG~il~ellt  218 (303)
T cd05088         179 --------------KKTMGRLPV--------------------------RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS  218 (303)
T ss_pred             --------------hcccCCCcc--------------------------cccCHHHHhccCCcccccchhhhhHHHHHHh
Confidence                          000000111                          2455666666678999999999999999998


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .|..||...+..+..+.+..+.+...+            +||...+..||++++++..
T Consensus       219 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         219 LGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             cCCCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            799999877766666555444333222            5788999999999988764

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.77  E-value=1.6e-19  Score=176.18  Aligned_cols=165  Identities=27%  Similarity=0.475  Sum_probs=113.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..+..++.|++.||+|||+.+|+||||||+|||++.++           ..++      
T Consensus        79 ~~~~~L~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~-----------~~kl------  139 (262)
T cd05058          79 MKHGDLRNFIRSETHN--PTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESF-----------TVKV------  139 (262)
T ss_pred             CCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC-----------cEEE------
Confidence            4689999999876543  36677889999999999999999999999999996555443           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...-                                                 .....+.       
T Consensus       140 ------~dfg~~~~~~~-------------------------------------------------~~~~~~~-------  157 (262)
T cd05058         140 ------ADFGLARDIYD-------------------------------------------------KEYYSVH-------  157 (262)
T ss_pred             ------CCccccccccC-------------------------------------------------Ccceeec-------
Confidence                  77877651000                                                 0000000       


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..                          +++||++....++.++|||||||++|||++.|.+||...+..+
T Consensus       158 -~~~~~~~~~~--------------------------y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~  210 (262)
T cd05058         158 -NHTGAKLPVK--------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD  210 (262)
T ss_pred             -ccccCcCCcc--------------------------ccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence             0000112223                          4555555566789999999999999999996677887777666


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++.+++.+            .||..++..||++.+++..
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~  255 (262)
T cd05058         211 ITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR  255 (262)
T ss_pred             HHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            66666555444322            5888899999999988764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG4717|consensus

Probab=99.77  E-value=1.5e-19  Score=180.92  Aligned_cols=160  Identities=19%  Similarity=0.409  Sum_probs=122.0

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .+|+|+|||-+|...  +.++.+++|++||+.|+.|+|...+|||||||+|          +++-..-..+|+       
T Consensus       100 D~GDl~DyImKHe~G--l~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPEN----------VVFFEKlGlVKL-------  160 (864)
T KOG4717|consen  100 DGGDLFDYIMKHEEG--LNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPEN----------VVFFEKLGLVKL-------  160 (864)
T ss_pred             CCchHHHHHHhhhcc--ccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcce----------eEEeeecCceEe-------
Confidence            378999999999874  6999999999999999999999999999999999          344333333444       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .|||++-                                                 .|.+|+.+           
T Consensus       161 -----TDFGFSN-------------------------------------------------kf~PG~kL-----------  175 (864)
T KOG4717|consen  161 -----TDFGFSN-------------------------------------------------KFQPGKKL-----------  175 (864)
T ss_pred             -----eeccccc-------------------------------------------------cCCCcchh-----------
Confidence                 6777664                                                 45566544           


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                        ...+|+..|-+||.+-      .+.|+                   .+++||||+|+++|.++ ||++||...+..|.
T Consensus       176 --~TsCGSLAYSAPEILL------GDsYD-------------------APAVDiWSLGVILyMLV-CGq~PFqeANDSET  227 (864)
T KOG4717|consen  176 --TTSCGSLAYSAPEILL------GDSYD-------------------APAVDIWSLGVILYMLV-CGQPPFQEANDSET  227 (864)
T ss_pred             --hcccchhhccCchhhh------cCccC-------------------CcchhhhHHHHHHHHHH-hCCCccccccchhh
Confidence              3356888888888753      34455                   78999999999999777 59999999999999


Q ss_pred             ccccccccccCCC-----------CCcCCCCCCHHHHHHHHcC
Q psy17476        242 VDRVQRGIILEKP-----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       242 ~~~i~~~~~~~~p-----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +-+|...+.-.+.           .....++..|...+++...
T Consensus       228 LTmImDCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~  270 (864)
T KOG4717|consen  228 LTMIMDCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST  270 (864)
T ss_pred             hhhhhcccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence            9888765544333           1245666677777777654

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.77  E-value=6.5e-19  Score=181.77  Aligned_cols=56  Identities=14%  Similarity=0.139  Sum_probs=48.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||+++|+||||||+|||++.++
T Consensus        83 ~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~  138 (376)
T cd05598          83 IPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG  138 (376)
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCC
Confidence            47899999998764   368889999999999999999999999999999996665544

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.77  E-value=2.1e-19  Score=175.42  Aligned_cols=162  Identities=30%  Similarity=0.543  Sum_probs=113.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++++.... .+++..++.++.|++.||+|||+++++||||||+||+++.++           ..++      
T Consensus        83 ~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~-----------~~~l------  144 (261)
T cd05072          83 MAKGSLLDFLKSDEGG-KVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESL-----------MCKI------  144 (261)
T ss_pred             CCCCcHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCC-----------cEEE------
Confidence            4789999999875432 367889999999999999999999999999999996555443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                 .+...          
T Consensus       145 ------~dfg~~~~~~-------------------------------------------------~~~~~----------  159 (261)
T cd05072         145 ------ADFGLARVIE-------------------------------------------------DNEYT----------  159 (261)
T ss_pred             ------CCCccceecC-------------------------------------------------CCcee----------
Confidence                  7787765100                                                 00000          


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..|+|                          ||++....++.++|+|||||++|||+|.|..||......+
T Consensus       160 -~~~~~~~~~~y~a--------------------------PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~  212 (261)
T cd05072         160 -AREGAKFPIKWTA--------------------------PEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD  212 (261)
T ss_pred             -ccCCCccceecCC--------------------------HHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH
Confidence             0000012233444                          4555555678899999999999999987999998877766


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+.++.+.+.+            +||..++..||++++++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         213 VMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            66666555444332            478888888888888764

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.77  E-value=1.5e-19  Score=176.12  Aligned_cols=162  Identities=41%  Similarity=0.701  Sum_probs=115.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++..+..  .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        81 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~-----------~~kl------  141 (256)
T cd05059          81 MANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDN-----------VVKV------  141 (256)
T ss_pred             CCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCC-----------cEEE------
Confidence            468999999988654  358889999999999999999999999999999996555443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++...                                                         +.   ..
T Consensus       142 ------~dfg~~~~~~---------------------------------------------------------~~---~~  155 (256)
T cd05059         142 ------SDFGLARYVL---------------------------------------------------------DD---QY  155 (256)
T ss_pred             ------CCcccceecc---------------------------------------------------------cc---cc
Confidence                  7777665100                                                         00   00


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......++..|+                          +||.+....++.++|+||||+++||+++.|..||...+..+
T Consensus       156 ~~~~~~~~~~~y~--------------------------~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  209 (256)
T cd05059         156 TSSQGTKFPVKWA--------------------------PPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE  209 (256)
T ss_pred             cccCCCCCCcccc--------------------------CHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence            0000000112344                          45555556788999999999999999987899998877777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+.+.+            +||...+..||++.+++..
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         210 VVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             HHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            77766655444433            4788888899998888753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.77  E-value=2.4e-19  Score=180.91  Aligned_cols=133  Identities=19%  Similarity=0.233  Sum_probs=96.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|..++.+..   .+++..+..++.||+.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        78 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~-----------~~kl------  137 (321)
T cd05603          78 VNGGELFFHLQRER---CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG-----------HVVL------  137 (321)
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC-----------CEEE------
Confidence            46899999887754   357889999999999999999999999999999996655543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                         ....   
T Consensus       138 ------~Dfg~~~~~~---------------------------------------------------------~~~~---  151 (321)
T cd05603         138 ------TDFGLCKEGV---------------------------------------------------------EPEE---  151 (321)
T ss_pred             ------ccCCCCccCC---------------------------------------------------------CCCC---
Confidence                  7888765100                                                         0000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+.                          .++|||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       152 -~~~~~~gt~--------------------------~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~  203 (321)
T cd05603         152 -TTSTFCGTP--------------------------EYLAPEVLRKEPYDRTVDWWCLGAVLYEMLY-GLPPFYSRDVSQ  203 (321)
T ss_pred             -ccccccCCc--------------------------ccCCHHHhcCCCCCCcCcccccchhhhhhhc-CCCCCCCCCHHH
Confidence             000111333                          4455566666678999999999999999999 999998877666


Q ss_pred             ecccccc
Q psy17476        241 VVDRVQR  247 (513)
Q Consensus       241 ~~~~i~~  247 (513)
                      +.+.+..
T Consensus       204 ~~~~i~~  210 (321)
T cd05603         204 MYDNILH  210 (321)
T ss_pred             HHHHHhc
Confidence            6555543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG1094|consensus

Probab=99.77  E-value=8e-20  Score=185.38  Aligned_cols=163  Identities=29%  Similarity=0.599  Sum_probs=120.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|||.+||.+|.... +.-....+||.|||.||+||.+.++|||||.+.|           +|.|.++..||      
T Consensus       617 mEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rN-----------cLv~~e~~iKi------  678 (807)
T KOG1094|consen  617 MENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESLNFVHRDLATRN-----------CLVDGEFTIKI------  678 (807)
T ss_pred             HhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhhchhhccccccc-----------eeecCcccEEe------
Confidence            78999999999996542 3445667799999999999999999999999999           45555566677      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++..                                                 =.|+-.          
T Consensus       679 ------adfgmsR~l-------------------------------------------------ysg~yy----------  693 (807)
T KOG1094|consen  679 ------ADFGMSRNL-------------------------------------------------YSGDYY----------  693 (807)
T ss_pred             ------cCccccccc-------------------------------------------------ccCCce----------
Confidence                  999998710                                                 001100          


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee-cCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT-CGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t-~g~~pf~~~~~~  239 (513)
                       ++.   |. ...|.                     -|||+|+|...+|++++|+|+||+++||+++ |.+.||....++
T Consensus       694 -~vq---gr-~vlpi---------------------RwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e  747 (807)
T KOG1094|consen  694 -RVQ---GR-AVLPI---------------------RWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE  747 (807)
T ss_pred             -eee---cc-eeeee---------------------eehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH
Confidence             000   00 00111                     2588999999999999999999999999997 889999988887


Q ss_pred             eeccccccc-------cccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        240 EVVDRVQRG-------IILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       240 ~~~~~i~~~-------~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      ++.+....-       ..++.|            +||..+...||.++++-.
T Consensus       748 ~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  748 QVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             HHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence            776655321       112222            589999999999999754

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.77  E-value=1.5e-19  Score=182.29  Aligned_cols=159  Identities=16%  Similarity=0.229  Sum_probs=111.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        78 ~~~~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~-----------~~kl------  137 (318)
T cd05570          78 VNGGDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG-----------HIKI------  137 (318)
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC-----------cEEe------
Confidence            46899999998764   368999999999999999999999999999999996655543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                         ...   
T Consensus       138 ------~Dfg~~~~~~~---------------------------------------------------------~~~---  151 (318)
T cd05570         138 ------ADFGMCKEGIL---------------------------------------------------------GGV---  151 (318)
T ss_pred             ------cccCCCeecCc---------------------------------------------------------CCC---
Confidence                  77777641000                                                         000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|                          ++.+|+||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       152 -~~~~~~g--------------------------~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~-G~~pf~~~~~~~  203 (318)
T cd05570         152 -TTSTFCG--------------------------TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLA-GQSPFEGDDEDE  203 (318)
T ss_pred             -cccceec--------------------------CccccCHHHhcCCCCCcchhhhhHHHHHHHHhh-CCCCCCCCCHHH
Confidence             0000112                          334556666667788999999999999999999 999998777666


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHHHH-----HHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQRA-----ESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~~a-----eeLL~~  273 (513)
                      +...+.......+.           +||..++..|+++     .+++.+
T Consensus       204 ~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         204 LFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             HHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            65555433222111           4666777777776     666654

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=4.6e-19  Score=180.81  Aligned_cols=187  Identities=17%  Similarity=0.199  Sum_probs=113.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||+|||++||+||||||+||+++.++           ..++      
T Consensus        83 ~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~-----------~~kL------  142 (350)
T cd05573          83 MPGGDLMNLLIRKD---VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADG-----------HIKL------  142 (350)
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC-----------CEEe------
Confidence            46899999998873   468899999999999999999999999999999996665554           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...-...                          ......     ......+..        .....+
T Consensus       143 ------~Dfg~~~~~~~~~~--------------------------~~~~~~-----~~~~~~~~~--------~~~~~~  177 (350)
T cd05573         143 ------ADFGLCKKMNKAKD--------------------------REYYLN-----DSHNLLFRD--------NVLVRR  177 (350)
T ss_pred             ------ecCCCCccCcccCc--------------------------cccccc-----ccccccccc--------cccccc
Confidence                  67776651100000                          000000     000000000        000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ..     ..  ..+.            ......|++.++|||++....++.++|||||||++|||++ |..||...+..+
T Consensus       178 ~~-----~~--~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~Pf~~~~~~~  237 (350)
T cd05573         178 RD-----HK--QRRV------------RANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLY-GFPPFYSDTLQE  237 (350)
T ss_pred             cc-----cc--cccc------------cccccccCccccCHHHHcCCCCCCceeeEecchhhhhhcc-CCCCCCCCCHHH
Confidence            00     00  0000            0001235667788888888899999999999999999999 999998777655


Q ss_pred             ecccccc---ccccCC-C-----------CCcCCCCCCHHH-HHHHHcC
Q psy17476        241 VVDRVQR---GIILEK-P-----------KAWYVGDMSRQR-AESILKQ  273 (513)
Q Consensus       241 ~~~~i~~---~~~~~~-p-----------~~w~~~~~~R~~-aeeLL~~  273 (513)
                      ....+..   ....+. +           +++. ++..|+. +++++.+
T Consensus       238 ~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         238 TYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             HHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            5554433   111111 1           2343 6667777 7777765

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.77  E-value=1.7e-19  Score=182.33  Aligned_cols=133  Identities=19%  Similarity=0.346  Sum_probs=97.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        83 ~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~-----------~ikL------  142 (323)
T cd05615          83 VNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG-----------HIKI------  142 (323)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC-----------CEEE------
Confidence            46899999998765   368899999999999999999999999999999996555443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                .+          .  
T Consensus       143 ------~Dfg~~~~~~~------------------------------------------------~~----------~--  156 (323)
T cd05615         143 ------ADFGMCKEHMV------------------------------------------------DG----------V--  156 (323)
T ss_pred             ------eccccccccCC------------------------------------------------CC----------c--
Confidence                  77877651000                                                00          0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+                          +.+||||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       157 -~~~~~~gt--------------------------~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-G~~pf~~~~~~~  208 (323)
T cd05615         157 -TTRTFCGT--------------------------PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA-GQPPFDGEDEDE  208 (323)
T ss_pred             -cccCccCC--------------------------ccccCHHHHcCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCHHH
Confidence             00011133                          34455666666778999999999999999999 999998877766


Q ss_pred             ecccccc
Q psy17476        241 VVDRVQR  247 (513)
Q Consensus       241 ~~~~i~~  247 (513)
                      +...+..
T Consensus       209 ~~~~i~~  215 (323)
T cd05615         209 LFQSIME  215 (323)
T ss_pred             HHHHHHh
Confidence            6665543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.77  E-value=3.2e-19  Score=184.52  Aligned_cols=178  Identities=17%  Similarity=0.197  Sum_probs=103.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||+++||||||||+|||++.++           ..++      
T Consensus        83 ~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g-----------~~kL------  142 (382)
T cd05625          83 IPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG-----------HIKL------  142 (382)
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-----------CEEE------
Confidence            57899999998764   368889999999999999999999999999999996665554           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++++-......    .         ......    .......+|............++..          
T Consensus       143 ------~DFGla~~~~~~~~~----~---------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~----------  189 (382)
T cd05625         143 ------TDFGLCTGFRWTHDS----K---------YYQSGD----HVRQDSMDFSNEWGDPANCRCGDRL----------  189 (382)
T ss_pred             ------eECCCCccccccccc----c---------cccccc----ccccccccccccccccccccccccc----------
Confidence                  677776521000000    0         000000    0000000000000000000000000          


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                                  .+.+....... .......+-|++.+||||++....|+.++|+||+||++|||++ |..||...+..+
T Consensus       190 ------------~~~~~~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~  255 (382)
T cd05625         190 ------------KPLERRAARQH-QRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV-GQPPFLAQTPLE  255 (382)
T ss_pred             ------------cchhhhhcccc-ccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHh-CCCCCCCCCHHH
Confidence                        00000000000 0000012346777889999998999999999999999999999 999998776655


Q ss_pred             ecccc
Q psy17476        241 VVDRV  245 (513)
Q Consensus       241 ~~~~i  245 (513)
                      ....+
T Consensus       256 ~~~~i  260 (382)
T cd05625         256 TQMKV  260 (382)
T ss_pred             HHHHH
Confidence            44444

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.77  E-value=3.9e-19  Score=172.85  Aligned_cols=161  Identities=20%  Similarity=0.328  Sum_probs=115.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++...... .++++.++.++.|++.||.|||+++|+|+||||+||+++.++           ..++      
T Consensus        80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~-----------~~~l------  141 (255)
T cd08219          80 CDGGDLMQKIKLQRGK-LFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG-----------KVKL------  141 (255)
T ss_pred             CCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCC-----------cEEE------
Confidence            4689999999875433 468889999999999999999999999999999996655443           2333      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                                
T Consensus       142 ------~dfg~~~~~~----------------------------------------------------------------  151 (255)
T cd08219         142 ------GDFGSARLLT----------------------------------------------------------------  151 (255)
T ss_pred             ------cccCcceeec----------------------------------------------------------------
Confidence                  6777654000                                                                


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                              ..+....               ...+.+.+++||++....++.++|+||+|+++|+|++ |..||...+...
T Consensus       152 --------~~~~~~~---------------~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~-g~~p~~~~~~~~  207 (255)
T cd08219         152 --------SPGAYAC---------------TYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCT-LKHPFQANSWKN  207 (255)
T ss_pred             --------ccccccc---------------cccCCccccCHHHHccCCcCchhhhhhhchhheehhh-ccCCCCCCCHHH
Confidence                    0000000               0113344566777777778999999999999999999 999998777666


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.++...+.+            +||..++..||++.+++..
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         208 LILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            66666555444333            4788888899998888753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0614|consensus

Probab=99.77  E-value=8.8e-20  Score=182.37  Aligned_cols=151  Identities=21%  Similarity=0.314  Sum_probs=115.3

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      ||.|-..|++.+   .++..+++.++.-+++|++|||++|||+|||||+|           +++|....+|+        
T Consensus       504 GGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPEN-----------llLd~~Gy~KL--------  561 (732)
T KOG0614|consen  504 GGELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPEN-----------LLLDNRGYLKL--------  561 (732)
T ss_pred             CchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhcCceeccCChhh-----------eeeccCCceEE--------
Confidence            789999998876   35888999999999999999999999999999999           66777777787        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          -|||++|-                                                          +......|  
T Consensus       562 ----VDFGFAKk----------------------------------------------------------i~~g~KTw--  577 (732)
T KOG0614|consen  562 ----VDFGFAKK----------------------------------------------------------IGSGRKTW--  577 (732)
T ss_pred             ----eehhhHHH----------------------------------------------------------hccCCcee--
Confidence                67887771                                                          00111122  


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                        ..+||+.|++||.                          |.++.++.++|.||+|+++||+++ |.+||++.++..++
T Consensus       578 --TFcGTpEYVAPEI--------------------------ILnKGHD~avDyWaLGIli~ELL~-G~pPFs~~dpmktY  628 (732)
T KOG0614|consen  578 --TFCGTPEYVAPEI--------------------------ILNKGHDRAVDYWALGILIYELLT-GSPPFSGVDPMKTY  628 (732)
T ss_pred             --eecCCcccccchh--------------------------hhccCcchhhHHHHHHHHHHHHHc-CCCCCCCCchHHHH
Confidence              3457777766655                          566788999999999999999999 99999999999999


Q ss_pred             cccccccccCCCCCcCCCCCCHHHHHHHHcC
Q psy17476        243 DRVQRGIILEKPKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       243 ~~i~~~~~~~~p~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.|.+|...     |.....-...|..++..
T Consensus       629 n~ILkGid~-----i~~Pr~I~k~a~~Lik~  654 (732)
T KOG0614|consen  629 NLILKGIDK-----IEFPRRITKTATDLIKK  654 (732)
T ss_pred             HHHHhhhhh-----hhcccccchhHHHHHHH
Confidence            988776443     32222333455555553

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.77  E-value=1.9e-19  Score=180.06  Aligned_cols=163  Identities=29%  Similarity=0.604  Sum_probs=116.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++..+...  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..|+      
T Consensus        90 ~~~g~l~~~~~~~~~~--~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~-----------~~kL------  150 (303)
T cd05110          90 MPHGCLLDYVHEHKDN--IGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN-----------HVKI------  150 (303)
T ss_pred             cCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCC-----------ceEE------
Confidence            4789999999886543  57889999999999999999999999999999996554432           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                          ..... 
T Consensus       151 ------~Dfg~~~~~~----------------------------------------------------------~~~~~-  165 (303)
T cd05110         151 ------TDFGLARLLE----------------------------------------------------------GDEKE-  165 (303)
T ss_pred             ------cccccccccc----------------------------------------------------------Ccccc-
Confidence                  7787765100                                                          00000 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......++                          ..+++||++....++.++|+|||||++||++++|..||......+
T Consensus       166 ~~~~~~~~~--------------------------~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~  219 (303)
T cd05110         166 YNADGGKMP--------------------------IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE  219 (303)
T ss_pred             cccCCCccc--------------------------cccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            000000011                          224556666677889999999999999999988999998776666


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.+.+..+.+++.+            .||..++..||++.+++..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         220 IPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            66666555544433            5898999999999998764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.77  E-value=1.1e-19  Score=184.23  Aligned_cols=54  Identities=13%  Similarity=0.162  Sum_probs=46.5

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +|+|.+++.++.   .+++..++.++.|++.||+|||+++|+||||||+|||++.++
T Consensus        87 ~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~  140 (338)
T cd07859          87 ESDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC  140 (338)
T ss_pred             CCCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence            478999998765   368899999999999999999999999999999996555443

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.76  E-value=3.3e-19  Score=173.78  Aligned_cols=162  Identities=40%  Similarity=0.652  Sum_probs=117.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+...  .+++..++.++.||+.||+|||+++++||||||+||+++.++           ..++      
T Consensus        81 ~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~-----------~~kl------  141 (256)
T cd05113          81 MSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQG-----------CVKV------  141 (256)
T ss_pred             CCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC-----------CEEE------
Confidence            357999999988654  368889999999999999999999999999999996554443           3445      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++...                                                 .+...          
T Consensus       142 ------~d~g~~~~~~-------------------------------------------------~~~~~----------  156 (256)
T cd05113         142 ------SDFGLSRYVL-------------------------------------------------DDEYT----------  156 (256)
T ss_pred             ------CCCccceecC-------------------------------------------------CCcee----------
Confidence                  7777655100                                                 00000          


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..                          +++||++....++.++|+|||||++|||++.|..||...+..+
T Consensus       157 -~~~~~~~~~~--------------------------y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~  209 (256)
T cd05113         157 -SSVGSKFPVR--------------------------WSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE  209 (256)
T ss_pred             -ecCCCccChh--------------------------hCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence             0000012223                          3455666666789999999999999999987999998877777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++.+.+.+            .||..++..||++.+++..
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         210 TVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence            77777666554433            4899999999999998753

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.76  E-value=2e-19  Score=181.74  Aligned_cols=133  Identities=21%  Similarity=0.292  Sum_probs=96.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|..++++.    .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        84 ~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~-----------~~kL------  142 (324)
T cd05589          84 AAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG-----------FVKI------  142 (324)
T ss_pred             CCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC-----------cEEe------
Confidence            4689999888653    368889999999999999999999999999999996665554           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...-                                                         .. .  
T Consensus       143 ------~Dfg~~~~~~~---------------------------------------------------------~~-~--  156 (324)
T cd05589         143 ------ADFGLCKEGMG---------------------------------------------------------FG-D--  156 (324)
T ss_pred             ------CcccCCccCCC---------------------------------------------------------CC-C--
Confidence                  77877651000                                                         00 0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|                          ||||++....++.++|+|||||++|||++ |..||...+..+
T Consensus       157 -~~~~~~g~~~y--------------------------~aPE~~~~~~~~~~~DiwslG~il~el~~-G~~pf~~~~~~~  208 (324)
T cd05589         157 -RTSTFCGTPEF--------------------------LAPEVLTETSYTRAVDWWGLGVLIYEMLV-GESPFPGDDEEE  208 (324)
T ss_pred             -cccccccCccc--------------------------cCHhHhcCCCCCcccchhhHHHHHHHHHh-CCCCCCCCCHHH
Confidence             00011244444                          45555556678999999999999999999 999998877776


Q ss_pred             eccccccc
Q psy17476        241 VVDRVQRG  248 (513)
Q Consensus       241 ~~~~i~~~  248 (513)
                      +...+..+
T Consensus       209 ~~~~i~~~  216 (324)
T cd05589         209 VFDSIVND  216 (324)
T ss_pred             HHHHHHhC
Confidence            66666443

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=4.3e-19  Score=182.27  Aligned_cols=167  Identities=16%  Similarity=0.212  Sum_probs=102.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        83 ~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~-----------~~kl------  142 (364)
T cd05599          83 LPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKG-----------HIKL------  142 (364)
T ss_pred             CCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC-----------CEEE------
Confidence            46899999998765   468999999999999999999999999999999996665544           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCC---CCCCCCCCCCCEEEEeecCC
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAI---EGGDLSLEKGAEYEVMDDTQ  157 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~  157 (513)
                            .|||+++........                        ...-........   ............       .
T Consensus       143 ------~Dfg~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~  185 (364)
T cd05599         143 ------SDFGLCTGLKKSHRT------------------------EFYRILSHALPSNFLDFISKPMSSKRK-------A  185 (364)
T ss_pred             ------eecccceeccccccc------------------------ccccccccccccccccccccccccccc-------c
Confidence                  677776521000000                        000000000000   000000000000       0


Q ss_pred             ccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC
Q psy17476        158 EHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK  237 (513)
Q Consensus       158 ~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~  237 (513)
                      ..|...+.      ..               -..+-|++.+||||++....++.++|+||+||++|||++ |..||...+
T Consensus       186 ~~~~~~~~------~~---------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~-G~~Pf~~~~  243 (364)
T cd05599         186 ETWKRNRR------AL---------------AYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV-GYPPFCSDN  243 (364)
T ss_pred             cchhhccc------cc---------------ccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc-CCCCCCCCC
Confidence            00000000      00               001236677788888888899999999999999999999 999998877


Q ss_pred             cceeccccc
Q psy17476        238 NTEVVDRVQ  246 (513)
Q Consensus       238 ~~~~~~~i~  246 (513)
                      ..+....+.
T Consensus       244 ~~~~~~~i~  252 (364)
T cd05599         244 PQETYRKII  252 (364)
T ss_pred             HHHHHHHHH
Confidence            666555543

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.76  E-value=2.3e-19  Score=174.99  Aligned_cols=165  Identities=18%  Similarity=0.271  Sum_probs=108.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++++++..  .+++..+..++.||+.||+|||+++|+||||||+||+++.++...  + ......++      
T Consensus        81 ~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~--~-~~~~~~~l------  149 (258)
T cd05078          81 VKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRK--T-GNPPFIKL------  149 (258)
T ss_pred             CCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccc--c-CCCceEEe------
Confidence            468999999988654  358889999999999999999999999999999997766654210  0 00000122      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++...                                                 ..              
T Consensus       150 ------~d~g~~~~~-------------------------------------------------~~--------------  160 (258)
T cd05078         150 ------SDPGISITV-------------------------------------------------LP--------------  160 (258)
T ss_pred             ------ccccccccc-------------------------------------------------CC--------------
Confidence                  455544300                                                 00              


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc-ccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY-TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                        .....++..|+|||.+                          .. ..++.++|+||+||++|||++.+..||......
T Consensus       161 --~~~~~~~~~y~aPE~~--------------------------~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~  212 (258)
T cd05078         161 --KEILLERIPWVPPECI--------------------------ENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ  212 (258)
T ss_pred             --chhccccCCccCchhc--------------------------cCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH
Confidence              0001244455555544                          33 246889999999999999999336777665554


Q ss_pred             eeccccccccccCCC----------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ............+.+          +||..++..||++++++..
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         213 KKLQFYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             HHHHHHHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence            433333222222222          5888999999999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.76  E-value=2.6e-19  Score=177.92  Aligned_cols=165  Identities=28%  Similarity=0.559  Sum_probs=115.6

Q ss_pred             CCCCcHHHHHHhcCC-------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHEN-------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.+++..+..             ...+++..++.++.|++.||+|||+++|+||||||+||+++.++        
T Consensus        89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~--------  160 (291)
T cd05094          89 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL--------  160 (291)
T ss_pred             CCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC--------
Confidence            478999999987542             11268889999999999999999999999999999996555443        


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                         ..++            .|||++.....                                                 .
T Consensus       161 ---~~~l------------~dfg~a~~~~~-------------------------------------------------~  176 (291)
T cd05094         161 ---LVKI------------GDFGMSRDVYS-------------------------------------------------T  176 (291)
T ss_pred             ---cEEE------------CCCCcccccCC-------------------------------------------------C
Confidence               3344            77777651000                                                 0


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                      ..          +-......++..|                          ++||++....++.++|+|||||++|||+|
T Consensus       177 ~~----------~~~~~~~~~~~~y--------------------------~aPE~~~~~~~~~~~Di~slG~il~el~t  220 (291)
T cd05094         177 DY----------YRVGGHTMLPIRW--------------------------MPPESIMYRKFTTESDVWSFGVILWEIFT  220 (291)
T ss_pred             ce----------eecCCCCCcceee--------------------------cChHHhccCCCCchhhHHHHHHHHHHHHh
Confidence            00          0000001123334                          44555556678899999999999999998


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +|..||...+..++.+.+..+.....+            +||..++..||++.+++..
T Consensus       221 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~  278 (291)
T cd05094         221 YGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKI  278 (291)
T ss_pred             CCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            899999887777666666555443322            5888899999988888764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.76  E-value=2.1e-19  Score=177.18  Aligned_cols=168  Identities=28%  Similarity=0.431  Sum_probs=117.0

Q ss_pred             CCCCcHHHHHHhcCC----CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEE
Q psy17476          1 MRHGSLLNYLRRHEN----TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVV   76 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~----~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~   76 (513)
                      +++|+|.+++.+...    ...+++..+..++.||+.||+|||+++++||||||+||+++.++.        ....++  
T Consensus        91 ~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~--------~~~~kl--  160 (277)
T cd05036          91 MAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGP--------GRVAKI--  160 (277)
T ss_pred             CCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCC--------CcceEe--
Confidence            468999999988642    113688899999999999999999999999999999966554321        112244  


Q ss_pred             EeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecC
Q psy17476         77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT  156 (513)
Q Consensus        77 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  156 (513)
                                .|||+++...                                                          ..
T Consensus       161 ----------~dfg~~~~~~----------------------------------------------------------~~  172 (277)
T cd05036         161 ----------ADFGMARDIY----------------------------------------------------------RA  172 (277)
T ss_pred             ----------ccCccccccC----------------------------------------------------------Cc
Confidence                      7777765100                                                          00


Q ss_pred             CccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCC
Q psy17476        157 QEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRL  236 (513)
Q Consensus       157 ~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~  236 (513)
                      .. +..     +...+                     ..+.+|+||++....++.++|||||||++|||++.|..||...
T Consensus       173 ~~-~~~-----~~~~~---------------------~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~  225 (277)
T cd05036         173 SY-YRK-----GGRAM---------------------LPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGR  225 (277)
T ss_pred             cc-eec-----CCCCC---------------------ccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence            00 000     00000                     0123466777777788999999999999999997699999987


Q ss_pred             CcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        237 KNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       237 ~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +..++...+....+...|            +||..++..||++.+++..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         226 TNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            777776666544333322            5788889999999888764

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.76  E-value=2.8e-19  Score=184.15  Aligned_cols=136  Identities=17%  Similarity=0.259  Sum_probs=94.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.    .+++..++.++.||+.||+|||+++|+||||||+|||++.++           ..|+      
T Consensus       125 ~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~-----------~~kL------  183 (370)
T cd05621         125 MPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG-----------HLKL------  183 (370)
T ss_pred             CCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC-----------CEEE------
Confidence            4789999999765    257889999999999999999999999999999996554443           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          ..  ...
T Consensus       184 ------~DFG~a~~~----------------------------------------------------------~~--~~~  197 (370)
T cd05621         184 ------ADFGTCMKM----------------------------------------------------------DE--TGM  197 (370)
T ss_pred             ------Eecccceec----------------------------------------------------------cc--CCc
Confidence                  778776510                                                          00  000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+.+|+|||.+....                      ....++.++|+||+||++|||++ |..||...+..+
T Consensus       198 ~~~~~~~gt~~Y~aPE~~~~~~----------------------~~~~~~~~~DiwSlG~ilyell~-G~~Pf~~~~~~~  254 (370)
T cd05621         198 VRCDTAVGTPDYISPEVLKSQG----------------------GDGYYGRECDWWSVGVFLFEMLV-GDTPFYADSLVG  254 (370)
T ss_pred             eecccCCCCcccCCHHHHhccC----------------------CCCCCCcccCEEeehHHHHHHHh-CCCCCCCCCHHH
Confidence            0001123555566555543211                      01136889999999999999999 999998777665


Q ss_pred             eccccc
Q psy17476        241 VVDRVQ  246 (513)
Q Consensus       241 ~~~~i~  246 (513)
                      ....+.
T Consensus       255 ~~~~i~  260 (370)
T cd05621         255 TYSKIM  260 (370)
T ss_pred             HHHHHH
Confidence            555554

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0608|consensus

Probab=99.76  E-value=5.1e-19  Score=180.83  Aligned_cols=164  Identities=17%  Similarity=0.254  Sum_probs=114.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ++|||+-.+|-+.+   .++++.++.++.++.+|+++.|..|+|||||||.||||+.||+  |         |+      
T Consensus       711 IPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGH--I---------KL------  770 (1034)
T KOG0608|consen  711 IPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGH--I---------KL------  770 (1034)
T ss_pred             cCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCc--e---------ee------
Confidence            58999999999976   4689999999999999999999999999999999999999986  3         33      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecC-Ccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT-QEH  159 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~  159 (513)
                            .||||+.|-.-+-    ++-                                    ...+|+......++ .++
T Consensus       771 ------TDFGLCTGfRWTH----dsk------------------------------------YYq~gdH~RqDSmep~~e  804 (1034)
T KOG0608|consen  771 ------TDFGLCTGFRWTH----DSK------------------------------------YYQEGDHHRQDSMEPSPE  804 (1034)
T ss_pred             ------eeccccccceecc----ccc------------------------------------cccCCCccccccCCCchh
Confidence                  8999988633210    000                                    01111111111111 011


Q ss_pred             ceeeecC---------CCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCC
Q psy17476        160 WWKVKDK---------NGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGK  230 (513)
Q Consensus       160 ~~~~~~~---------~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~  230 (513)
                      |.-....         .......+-.               .-|+++++|||+|....|+..+|+||.|++||||+. |+
T Consensus       805 ~~d~~~~lkvL~~ra~~~h~r~~ahs---------------lvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~-g~  868 (1034)
T KOG0608|consen  805 WADISKCLKVLERRAMRQHQRILAHS---------------LVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLV-GQ  868 (1034)
T ss_pred             hccccccchHHHHHHHhhhhhhhhhh---------------hcCCCcccChHHhcccCccccchhhHhhHHHHHHhh-CC
Confidence            1111000         0011111111               237888999999999999999999999999999999 99


Q ss_pred             CCCCCCCcceeccccc
Q psy17476        231 MPYGRLKNTEVVDRVQ  246 (513)
Q Consensus       231 ~pf~~~~~~~~~~~i~  246 (513)
                      +||....+.+...+|.
T Consensus       869 ~pf~~~tp~~tq~kv~  884 (1034)
T KOG0608|consen  869 PPFLADTPGETQYKVI  884 (1034)
T ss_pred             CCccCCCCCcceeeee
Confidence            9998888877766553

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.76  E-value=3.1e-19  Score=173.73  Aligned_cols=158  Identities=32%  Similarity=0.620  Sum_probs=113.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++++++... .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        82 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~-----------~~kl------  143 (256)
T cd05082          82 MAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDN-----------VAKV------  143 (256)
T ss_pred             CCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCC-----------cEEe------
Confidence            4689999999886543 368889999999999999999999999999999996555443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                         ..    
T Consensus       144 ------~dfg~~~~~~~---------------------------------------------------------~~----  156 (256)
T cd05082         144 ------SDFGLTKEASS---------------------------------------------------------TQ----  156 (256)
T ss_pred             ------cCCccceeccc---------------------------------------------------------cC----
Confidence                  77877651000                                                         00    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                         ....++.+|+                          +||++....++.++|+|||||++|||++.|+.||...+..+
T Consensus       157 ---~~~~~~~~y~--------------------------aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~  207 (256)
T cd05082         157 ---DTGKLPVKWT--------------------------APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD  207 (256)
T ss_pred             ---CCCccceeec--------------------------CHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence               0001222344                          45555555778999999999999999977999998777666


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+.++.....+            +||..++..||++.+++.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         208 VVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             HHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            66666554433322            578888888888888765

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.76  E-value=2.6e-19  Score=176.97  Aligned_cols=164  Identities=23%  Similarity=0.414  Sum_probs=116.8

Q ss_pred             CCCcHHHHHHhcC-------------CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCc
Q psy17476          2 RHGSLLNYLRRHE-------------NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQ   68 (513)
Q Consensus         2 ~~g~L~~~l~~~~-------------~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~   68 (513)
                      ++|+|.+++....             ....+++..+..++.|++.||+|||+++|+||||||+||+++.+          
T Consensus        91 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~----------  160 (283)
T cd05091          91 SHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK----------  160 (283)
T ss_pred             CCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC----------
Confidence            5788999986421             11136788899999999999999999999999999999655443          


Q ss_pred             cCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCC
Q psy17476         69 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGA  148 (513)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  148 (513)
                       ...++            .|||+++...                                                 ...
T Consensus       161 -~~~kl------------~Dfg~~~~~~-------------------------------------------------~~~  178 (283)
T cd05091         161 -LNVKI------------SDLGLFREVY-------------------------------------------------AAD  178 (283)
T ss_pred             -CceEe------------cccccccccc-------------------------------------------------cch
Confidence             23455            7888765100                                                 000


Q ss_pred             EEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeec
Q psy17476        149 EYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTC  228 (513)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~  228 (513)
                      ...          ......                          +.+.+++||++....++.++|+||+||++|||++.
T Consensus       179 ~~~----------~~~~~~--------------------------~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~  222 (283)
T cd05091         179 YYK----------LMGNSL--------------------------LPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSY  222 (283)
T ss_pred             hee----------eccCcc--------------------------CCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcC
Confidence            000          000001                          12234566666667789999999999999999987


Q ss_pred             CCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        229 GKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       229 g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      |..||......++.+.+..+...+.+            .||..++..||++.+++..
T Consensus       223 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         223 GLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            89999888887788877666554433            5899999999999998764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.76  E-value=2.1e-19  Score=185.33  Aligned_cols=147  Identities=26%  Similarity=0.458  Sum_probs=99.0

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccccccCCCCcccccCCeE
Q psy17476         18 GGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEY   97 (513)
Q Consensus        18 ~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   97 (513)
                      ++++..++.++.||+.||+|||+++|+||||||+||+++.++           ..++            +|||+++..  
T Consensus       208 ~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~-----------~~kL------------~DfGla~~~--  262 (374)
T cd05106         208 PLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGR-----------VAKI------------CDFGLARDI--  262 (374)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCC-----------eEEE------------eeceeeeec--
Confidence            367888999999999999999999999999999996554432           3344            778776510  


Q ss_pred             EeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCc
Q psy17476         98 EVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNY  177 (513)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~  177 (513)
                        .                                             .+....          ......++..      
T Consensus       263 --~---------------------------------------------~~~~~~----------~~~~~~~~~~------  279 (374)
T cd05106         263 --M---------------------------------------------NDSNYV----------VKGNARLPVK------  279 (374)
T ss_pred             --c---------------------------------------------CCccee----------eccCCCCccc------
Confidence              0                                             000000          0000011122      


Q ss_pred             eeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee-ccccccccccCCC--
Q psy17476        178 VKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV-VDRVQRGIILEKP--  254 (513)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~-~~~i~~~~~~~~p--  254 (513)
                                          +||||++....++.++|||||||++|||++.|..||........ ...+..+.++..|  
T Consensus       280 --------------------y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  339 (374)
T cd05106         280 --------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDF  339 (374)
T ss_pred             --------------------eeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCC
Confidence                                45566666667899999999999999999779999987654332 2333333333222  


Q ss_pred             ----------CCcCCCCCCHHHHHHHHc
Q psy17476        255 ----------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       255 ----------~~w~~~~~~R~~aeeLL~  272 (513)
                                .||..++..||++.+++.
T Consensus       340 ~~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         340 APPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                      578888999999888765

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.76  E-value=4.2e-19  Score=175.19  Aligned_cols=164  Identities=24%  Similarity=0.420  Sum_probs=115.6

Q ss_pred             CCCcHHHHHHhcCCC-----CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEE
Q psy17476          2 RHGSLLNYLRRHENT-----LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVV   76 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~-----~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~   76 (513)
                      ++|+|.+++......     ..+++..+..++.|++.||+|||+++++||||||+||+++.+           ...++  
T Consensus        92 ~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~-----------~~~kl--  158 (280)
T cd05043          92 NWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE-----------LQVKI--  158 (280)
T ss_pred             CCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCC-----------CcEEE--
Confidence            579999999875321     247899999999999999999999999999999999655443           33455  


Q ss_pred             EeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecC
Q psy17476         77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT  156 (513)
Q Consensus        77 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  156 (513)
                                .|||+++...                                                 .++.. ...  
T Consensus       159 ----------~d~g~~~~~~-------------------------------------------------~~~~~-~~~--  176 (280)
T cd05043         159 ----------TDNALSRDLF-------------------------------------------------PMDYH-CLG--  176 (280)
T ss_pred             ----------CCCCCccccc-------------------------------------------------CCceE-EeC--
Confidence                      7888776100                                                 00000 000  


Q ss_pred             CccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCC
Q psy17476        157 QEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRL  236 (513)
Q Consensus       157 ~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~  236 (513)
                             ....++..                          +++||++....++.++|||||||++||+++.|+.||...
T Consensus       177 -------~~~~~~~~--------------------------y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  223 (280)
T cd05043         177 -------DNENRPVK--------------------------WMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI  223 (280)
T ss_pred             -------CCCCcchh--------------------------ccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC
Confidence                   00012222                          455666666678999999999999999998899999887


Q ss_pred             CcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        237 KNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       237 ~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +..++...+..+.+++.+            +||..++..||++.+++..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~  272 (280)
T cd05043         224 DPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQC  272 (280)
T ss_pred             CHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            777766666555443322            4788888888888887653

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.76  E-value=3e-19  Score=173.91  Aligned_cols=162  Identities=31%  Similarity=0.527  Sum_probs=115.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   .+++..+..++.|++.||+|||.++++||||||+||+++.++           ..++      
T Consensus        77 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~-----------~~kl------  136 (257)
T cd05060          77 APLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRH-----------QAKI------  136 (257)
T ss_pred             CCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCC-----------cEEe------
Confidence            36899999999875   358899999999999999999999999999999996554443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++....                                                               
T Consensus       137 ------~df~~~~~~~~---------------------------------------------------------------  147 (257)
T cd05060         137 ------SDFGMSRALGA---------------------------------------------------------------  147 (257)
T ss_pred             ------ccccccceeec---------------------------------------------------------------
Confidence                  77777651000                                                               


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                             +...+....              ...|...+++||++....++.++|+|||||++|||++.|..||...+..+
T Consensus       148 -------~~~~~~~~~--------------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~  206 (257)
T cd05060         148 -------GSDYYRATT--------------AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE  206 (257)
T ss_pred             -------CCccccccc--------------CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence                   000000000              00011234566667777889999999999999999977999998877777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+.++.+.+.+            +||..++..||++.+++.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         207 VIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             HHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            76666655544443            578888888888888765

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.76  E-value=2.7e-19  Score=184.29  Aligned_cols=136  Identities=16%  Similarity=0.259  Sum_probs=95.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.    .+++..+..++.|++.||+|||+++|+||||||+|||++.++           .+++      
T Consensus       125 ~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~-----------~~kL------  183 (370)
T cd05596         125 MPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG-----------HLKL------  183 (370)
T ss_pred             CCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC-----------CEEE------
Confidence            4789999999764    257889999999999999999999999999999996655543           3445      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                          ..  ..
T Consensus       184 ------~DfG~~~~~~----------------------------------------------------------~~--~~  197 (370)
T cd05596         184 ------ADFGTCMKMD----------------------------------------------------------AN--GM  197 (370)
T ss_pred             ------Eeccceeecc----------------------------------------------------------CC--Cc
Confidence                  7777764100                                                          00  00


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+..|+|||++....                      ....++.++|+||+||++|||++ |..||...+..+
T Consensus       198 ~~~~~~~gt~~y~aPE~~~~~~----------------------~~~~~~~~~DiwSlGvilyellt-G~~Pf~~~~~~~  254 (370)
T cd05596         198 VRCDTAVGTPDYISPEVLKSQG----------------------GDGYYGRECDWWSVGVFLYEMLV-GDTPFYADSLVG  254 (370)
T ss_pred             ccCCCCCCCcCeECHHHhccCC----------------------CCCCCCCceeeeehhHHHHHHHh-CCCCcCCCCHHH
Confidence            0001123566666666543211                      01247889999999999999999 999998877666


Q ss_pred             eccccc
Q psy17476        241 VVDRVQ  246 (513)
Q Consensus       241 ~~~~i~  246 (513)
                      ....+.
T Consensus       255 ~~~~i~  260 (370)
T cd05596         255 TYSKIM  260 (370)
T ss_pred             HHHHHH
Confidence            655554

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0607|consensus

Probab=99.76  E-value=4.8e-19  Score=168.22  Aligned_cols=170  Identities=19%  Similarity=0.285  Sum_probs=110.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |.||.|..+|.++.   .+++..+..+.++|+.||.|||.+||.|||+||+|||...++..        ...||      
T Consensus       158 m~GGplLshI~~~~---~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~v--------sPvKi------  220 (463)
T KOG0607|consen  158 MRGGPLLSHIQKRK---HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKV--------SPVKI------  220 (463)
T ss_pred             ccCchHHHHHHHhh---hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCc--------Cceee------
Confidence            78999999999987   45999999999999999999999999999999999655444321        11233      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||-|.+|-..  .                                       .+.+  +-.+        +  
T Consensus       221 ------CDfDLgSg~k~--~---------------------------------------~~~s--past--------P--  241 (463)
T KOG0607|consen  221 ------CDFDLGSGIKL--N---------------------------------------NDCS--PAST--------P--  241 (463)
T ss_pred             ------ecccccccccc--C---------------------------------------CCCC--CCCC--------c--
Confidence                  45555443000  0                                       0000  0000        0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCC----
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRL----  236 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~----  236 (513)
                       ......|+..||+||++..-                     +-...-|+.++|.||+|+++|-|++ |-+||.+.    
T Consensus       242 -~L~tPvGSAEfMAPEVVd~f---------------------v~qA~~YDKrCDlwSLGvIlYImLs-GYpPFvG~Cg~d  298 (463)
T KOG0607|consen  242 -ELLTPVGSAEFMAPEVVDVF---------------------VDQATFYDKRCDLWSLGVILYIMLS-GYPPFVGHCGAD  298 (463)
T ss_pred             -cccCcccchhhcchhHHhhh---------------------ccccccccccccHHHHHHHHHHHHh-CCCCccCccCCc
Confidence             00112345555555543210                     0123568999999999999999999 99999643    


Q ss_pred             ---Ccc--------eeccccccccccCCCCCcCCCCCCHHHHHH
Q psy17476        237 ---KNT--------EVVDRVQRGIILEKPKAWYVGDMSRQRAES  269 (513)
Q Consensus       237 ---~~~--------~~~~~i~~~~~~~~p~~w~~~~~~R~~aee  269 (513)
                         +..        .+.+.|+.|+...+.+.|.+-.....+...
T Consensus       299 CGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlis  342 (463)
T KOG0607|consen  299 CGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLIS  342 (463)
T ss_pred             CCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHH
Confidence               322        335667788888888899876554443333

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.76  E-value=4.4e-19  Score=176.01  Aligned_cols=164  Identities=27%  Similarity=0.508  Sum_probs=115.5

Q ss_pred             CCCCcHHHHHHhcCC----------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccC
Q psy17476          1 MRHGSLLNYLRRHEN----------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMI   70 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~----------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~   70 (513)
                      +++|+|.++|..+..          ...+++..++.++.|++.||+|||+++++||||||+||+++.++           
T Consensus        89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~-----------  157 (288)
T cd05093          89 MKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL-----------  157 (288)
T ss_pred             CCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC-----------
Confidence            468999999986531          12378999999999999999999999999999999996555443           


Q ss_pred             CCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEE
Q psy17476         71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEY  150 (513)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  150 (513)
                      ..++            .|||+++...                                                 ..+. 
T Consensus       158 ~~kl------------~dfg~~~~~~-------------------------------------------------~~~~-  175 (288)
T cd05093         158 LVKI------------GDFGMSRDVY-------------------------------------------------STDY-  175 (288)
T ss_pred             cEEe------------ccCCcccccc-------------------------------------------------CCce-
Confidence            3344            7777765100                                                 0000 


Q ss_pred             EEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCC
Q psy17476        151 EVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGK  230 (513)
Q Consensus       151 ~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~  230 (513)
                               ........++                          +.++|||++....++.++|+|||||++|||++.|.
T Consensus       176 ---------~~~~~~~~~~--------------------------~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~  220 (288)
T cd05093         176 ---------YRVGGHTMLP--------------------------IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK  220 (288)
T ss_pred             ---------eecCCCCCcc--------------------------ccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence                     0000000012                          23456666777788999999999999999998789


Q ss_pred             CCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        231 MPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       231 ~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      .||......++...+.++...+.+            +||..++..||++.+++.
T Consensus       221 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         221 QPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             CCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            999887777776666655443322            578888888888888754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.76  E-value=5.5e-19  Score=172.99  Aligned_cols=163  Identities=31%  Similarity=0.564  Sum_probs=117.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++...  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        87 ~~~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~-----------~~~l------  147 (266)
T cd05033          87 MENGSLDKFLRENDGK--FTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNL-----------VCKV------  147 (266)
T ss_pred             CCCCCHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC-----------CEEE------
Confidence            4689999999886543  58889999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++...     .                                          ..+..           
T Consensus       148 ------~dfg~~~~~~-----~------------------------------------------~~~~~-----------  163 (266)
T cd05033         148 ------SDFGLSRRLE-----D------------------------------------------SEATY-----------  163 (266)
T ss_pred             ------Cccchhhccc-----c------------------------------------------cccce-----------
Confidence                  7777765100     0                                          00000           


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..|                          ++||.+.+..++.++|+||||+++||+++.|..||......+
T Consensus       164 -~~~~~~~~~~y--------------------------~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~  216 (266)
T cd05033         164 -TTKGGKIPIRW--------------------------TAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD  216 (266)
T ss_pred             -eccCCCCCccc--------------------------cChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH
Confidence             00000112234                          445555566789999999999999999987999998887777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++.+.+.+            +||..++..||++.+++..
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         217 VIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            77777666554443            5788889999999888754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.76  E-value=8e-19  Score=177.98  Aligned_cols=139  Identities=17%  Similarity=0.293  Sum_probs=97.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..++.++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        83 ~~gg~L~~~l~~~~~~--l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~-----------~~kl------  143 (331)
T cd05624          83 YVGGDLLTLLSKFEDR--LPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG-----------HIRL------  143 (331)
T ss_pred             CCCCcHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCC-----------CEEE------
Confidence            4789999999885443  58889999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          .....  
T Consensus       144 ------~DfG~a~~~----------------------------------------------------------~~~~~--  157 (331)
T cd05624         144 ------ADFGSCLKM----------------------------------------------------------NQDGT--  157 (331)
T ss_pred             ------Eeccceeec----------------------------------------------------------cCCCc--
Confidence                  677776510                                                          00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+.+|+|||++.....                     ....++.++|+||+||++|||++ |..||...+..+
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~---------------------~~~~~~~~~DiwSlGvil~ell~-g~~Pf~~~~~~~  215 (331)
T cd05624         158 VQSSVAVGTPDYISPEILQAMED---------------------GMGKYGPECDWWSLGVCMYEMLY-GETPFYAESLVE  215 (331)
T ss_pred             eeeccccCCcccCCHHHHhcccc---------------------CCCCCCCcccEEeeehhhhhhhh-CCCCccCCCHHH
Confidence            00011236666666665432110                     01357889999999999999999 999998777666


Q ss_pred             eccccc
Q psy17476        241 VVDRVQ  246 (513)
Q Consensus       241 ~~~~i~  246 (513)
                      ....+.
T Consensus       216 ~~~~i~  221 (331)
T cd05624         216 TYGKIM  221 (331)
T ss_pred             HHHHHH
Confidence            655553

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PTZ00284 protein kinase; Provisional

Probab=99.75  E-value=2.3e-19  Score=190.47  Aligned_cols=54  Identities=15%  Similarity=0.215  Sum_probs=47.3

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh-cceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER-HNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~-~~iiHrdikp~N~~~~~~~   59 (513)
                      +|+|.+++.++.   .+++..++.++.||+.||+|||+ .|||||||||+|||++.++
T Consensus       215 g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~  269 (467)
T PTZ00284        215 GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSD  269 (467)
T ss_pred             CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCC
Confidence            688999998764   46888999999999999999998 5999999999997776654

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.75  E-value=4.1e-19  Score=183.21  Aligned_cols=148  Identities=24%  Similarity=0.465  Sum_probs=100.7

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccccccCCCCcccccCCeE
Q psy17476         18 GGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEY   97 (513)
Q Consensus        18 ~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   97 (513)
                      .+++..+..++.||+.||+|||+++|+||||||+|||++.++           ..++            .|||+++...-
T Consensus       210 ~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~-----------~~kl------------~DfG~a~~~~~  266 (375)
T cd05104         210 ALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGR-----------ITKI------------CDFGLARDIRN  266 (375)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCC-----------cEEE------------ecCccceeccC
Confidence            467888999999999999999999999999999996554432           3344            78887651000


Q ss_pred             EeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCc
Q psy17476         98 EVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNY  177 (513)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~  177 (513)
                                                                               ...  ........++..|     
T Consensus       267 ---------------------------------------------------------~~~--~~~~~~~~~~~~y-----  282 (375)
T cd05104         267 ---------------------------------------------------------DSN--YVVKGNARLPVKW-----  282 (375)
T ss_pred             ---------------------------------------------------------ccc--ccccCCCCCCcce-----
Confidence                                                                     000  0000000112233     


Q ss_pred             eeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc-ceeccccccccccCCC--
Q psy17476        178 VKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TEVVDRVQRGIILEKP--  254 (513)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~-~~~~~~i~~~~~~~~p--  254 (513)
                                           |+||++....++.++|+|||||++|||++.|..||..... ..+...+..+.+...|  
T Consensus       283 ---------------------~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  341 (375)
T cd05104         283 ---------------------MAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPEC  341 (375)
T ss_pred             ---------------------eChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCC
Confidence                                 4555566667899999999999999999878999976654 3344444444443322  


Q ss_pred             ----------CCcCCCCCCHHHHHHHHcC
Q psy17476        255 ----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       255 ----------~~w~~~~~~R~~aeeLL~~  273 (513)
                                .||..++..||++.+++..
T Consensus       342 ~~~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         342 APSEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence                      4788999999999988753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.75  E-value=5.8e-19  Score=174.16  Aligned_cols=163  Identities=28%  Similarity=0.551  Sum_probs=118.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++...  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        90 ~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~-----------~~kL------  150 (279)
T cd05057          90 MPLGCLLDYVRNHKDN--IGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQ-----------HVKI------  150 (279)
T ss_pred             CCCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCC-----------eEEE------
Confidence            4689999999987554  58889999999999999999999999999999996554432           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                          ..... 
T Consensus       151 ------~dfg~~~~~~----------------------------------------------------------~~~~~-  165 (279)
T cd05057         151 ------TDFGLAKLLD----------------------------------------------------------VDEKE-  165 (279)
T ss_pred             ------CCCccccccc----------------------------------------------------------Ccccc-
Confidence                  7777765100                                                          00000 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      +......++                          ..+++||++....++.++|+|||||++||+++.|..||......+
T Consensus       166 ~~~~~~~~~--------------------------~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  219 (279)
T cd05057         166 YHAEGGKVP--------------------------IKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE  219 (279)
T ss_pred             eecCCCccc--------------------------ccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH
Confidence            000000011                          234556666667789999999999999999987999998888777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.+.+..+...+.|            +||..++..||++.+++..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~  264 (279)
T cd05057         220 IPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINE  264 (279)
T ss_pred             HHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            77777666554443            5899999999999887764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.75  E-value=4.9e-19  Score=174.52  Aligned_cols=165  Identities=28%  Similarity=0.564  Sum_probs=117.1

Q ss_pred             CCCCcHHHHHHhcCC-----------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCcc
Q psy17476          1 MRHGSLLNYLRRHEN-----------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQM   69 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~   69 (513)
                      +++|+|.++|..+..           ...+++..+..++.|++.||+|||+++++||||||+||+++.++          
T Consensus        90 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~----------  159 (280)
T cd05049          90 MEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDL----------  159 (280)
T ss_pred             CCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCC----------
Confidence            478999999987532           12368889999999999999999999999999999996665543          


Q ss_pred             CCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCE
Q psy17476         70 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAE  149 (513)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  149 (513)
                       ..++            .||++++..    .                                             ..+.
T Consensus       160 -~~kl------------~d~g~~~~~----~---------------------------------------------~~~~  177 (280)
T cd05049         160 -VVKI------------GDFGMSRDV----Y---------------------------------------------TTDY  177 (280)
T ss_pred             -eEEE------------CCcccceec----c---------------------------------------------cCcc
Confidence             3344            677765410    0                                             0000


Q ss_pred             EEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecC
Q psy17476        150 YEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCG  229 (513)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g  229 (513)
                      ...          .....++.                          .++|||++....++.++|+||+||++|||++.|
T Consensus       178 ~~~----------~~~~~~~~--------------------------~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g  221 (280)
T cd05049         178 YRV----------GGHTMLPI--------------------------RWMPPESIMYRKFTTESDVWSFGVVLWEIFTYG  221 (280)
T ss_pred             eec----------CCCCcccc--------------------------eecChhhhccCCcchhhhHHHHHHHHHHHHhcC
Confidence            000          00000122                          245566666678899999999999999999879


Q ss_pred             CCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        230 KMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       230 ~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..||...+..+..+.+.++.....+            +||..++..|+.+.+++..
T Consensus       222 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  277 (280)
T cd05049         222 KQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHER  277 (280)
T ss_pred             CCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            9999888877777777655444333            4888999999999988753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.75  E-value=5e-19  Score=171.81  Aligned_cols=161  Identities=22%  Similarity=0.351  Sum_probs=115.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++..+... .+++..+..++.|++.||.|||+++|+||||||+||+++.++           ..++      
T Consensus        81 ~~~~~L~~~l~~~~~~-~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~-----------~~~l------  142 (256)
T cd08529          81 AENGDLHKLLKMQRGR-PLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYD-----------NVKI------  142 (256)
T ss_pred             CCCCcHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCC-----------CEEE------
Confidence            4689999999986333 468889999999999999999999999999999996655543           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++..                                                          ... .. 
T Consensus       143 ------~df~~~~~~----------------------------------------------------------~~~-~~-  156 (256)
T cd08529         143 ------GDLGVAKLL----------------------------------------------------------SDN-TN-  156 (256)
T ss_pred             ------cccccceec----------------------------------------------------------cCc-cc-
Confidence                  677765410                                                          000 00 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|                          ||++....++.++|+|||||++|||++ |..||...+..+
T Consensus       157 -~~~~~~~~~~y~a--------------------------PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~  208 (256)
T cd08529         157 -FANTIVGTPYYLS--------------------------PELCEDKPYNEKSDVWALGVVLYECCT-GKHPFDANNQGA  208 (256)
T ss_pred             -hhhccccCccccC--------------------------HHHhcCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence             0001113334444                          555555567899999999999999999 999998777666


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.++..++.+            +||...+..||.+.+++.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         209 LILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            66555544443333            5888999999999998875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.75  E-value=4.9e-19  Score=179.39  Aligned_cols=56  Identities=13%  Similarity=0.096  Sum_probs=48.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.++.   .+++..++.++.|++.||+|||+++|+||||||+||+++.++
T Consensus        78 ~~~g~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~  133 (329)
T cd05588          78 VSGGDLMFHMQRQR---KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG  133 (329)
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC
Confidence            57899999998764   468999999999999999999999999999999996655443

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.75  E-value=9.1e-19  Score=173.95  Aligned_cols=164  Identities=26%  Similarity=0.470  Sum_probs=115.6

Q ss_pred             CCCcHHHHHHhcC-------------CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCc
Q psy17476          2 RHGSLLNYLRRHE-------------NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQ   68 (513)
Q Consensus         2 ~~g~L~~~l~~~~-------------~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~   68 (513)
                      ++|+|.++++++.             ....+++..++.++.|++.||+|||+++|+||||||+||+++.++         
T Consensus        99 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~---------  169 (293)
T cd05053          99 AHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDH---------  169 (293)
T ss_pred             CCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCC---------
Confidence            6899999998642             112468889999999999999999999999999999996665543         


Q ss_pred             cCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCC
Q psy17476         69 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGA  148 (513)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  148 (513)
                        ..++            .|||+++...                                                 ..+
T Consensus       170 --~~kL------------~Dfg~~~~~~-------------------------------------------------~~~  186 (293)
T cd05053         170 --VMKI------------ADFGLARDIH-------------------------------------------------HID  186 (293)
T ss_pred             --eEEe------------Cccccccccc-------------------------------------------------ccc
Confidence              2344            7887765100                                                 000


Q ss_pred             EEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeec
Q psy17476        149 EYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTC  228 (513)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~  228 (513)
                      ...          ......++..|                          ++||++....++.++|+|||||++||+++.
T Consensus       187 ~~~----------~~~~~~~~~~y--------------------------~aPE~~~~~~~~~~~Di~slG~il~el~~~  230 (293)
T cd05053         187 YYR----------KTTNGRLPVKW--------------------------MAPEALFDRVYTHQSDVWSFGVLLWEIFTL  230 (293)
T ss_pred             cee----------ccCCCCCCccc--------------------------cCHHHhccCCcCcccceeehhhHHHHHhcC
Confidence            000          00000112233                          455555666789999999999999999977


Q ss_pred             CCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        229 GKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       229 g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      |..||...+..++.+.+..+.....+            +||..++..||++.+++..
T Consensus       231 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         231 GGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            99999888777777766655444333            5788889999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.75  E-value=2.2e-19  Score=178.35  Aligned_cols=132  Identities=18%  Similarity=0.316  Sum_probs=92.8

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .|+|.+++......  +++..++.++.||+.||+|||+++|+||||||+|||++.++           ..++        
T Consensus        86 ~~~l~~~l~~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~-----------~~kl--------  144 (288)
T cd07871          86 DSDLKQYLDNCGNL--MSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG-----------ELKL--------  144 (288)
T ss_pred             CcCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC-----------CEEE--------
Confidence            46899999876543  57889999999999999999999999999999996555443           3455        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++....                                                          ....   
T Consensus       145 ----~DfG~~~~~~~----------------------------------------------------------~~~~---  159 (288)
T cd07871         145 ----ADFGLARAKSV----------------------------------------------------------PTKT---  159 (288)
T ss_pred             ----CcCcceeeccC----------------------------------------------------------CCcc---
Confidence                78887651000                                                          0000   


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .....++..|+|||.+..                         ...++.++|+||+||++|||++ |+.||...+..+.+
T Consensus       160 ~~~~~~~~~y~aPE~~~~-------------------------~~~~~~~~DiwslG~~l~~l~~-g~~pf~~~~~~~~~  213 (288)
T cd07871         160 YSNEVVTLWYRPPDVLLG-------------------------STEYSTPIDMWGVGCILYEMAT-GRPMFPGSTVKEEL  213 (288)
T ss_pred             ccCceecccccChHHhcC-------------------------CcccCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Confidence            001124455555554321                         2357889999999999999999 99999877765555


Q ss_pred             cccc
Q psy17476        243 DRVQ  246 (513)
Q Consensus       243 ~~i~  246 (513)
                      ..+.
T Consensus       214 ~~~~  217 (288)
T cd07871         214 HLIF  217 (288)
T ss_pred             HHHH
Confidence            4443

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.75  E-value=5.7e-19  Score=172.97  Aligned_cols=164  Identities=33%  Similarity=0.536  Sum_probs=115.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++...  +++..+..++.|++.||+|||+++++||||||+||+++.++           ..++      
T Consensus        88 ~~~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~-----------~~kl------  148 (268)
T cd05063          88 MENGALDKYLRDHDGE--FSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNL-----------ECKV------  148 (268)
T ss_pred             CCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCC-----------cEEE------
Confidence            4689999999876533  58889999999999999999999999999999996655442           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                         ... ...
T Consensus       149 ------~dfg~~~~~~---------------------------------------------------------~~~-~~~  164 (268)
T cd05063         149 ------SDFGLSRVLE---------------------------------------------------------DDP-EGT  164 (268)
T ss_pred             ------CCCccceecc---------------------------------------------------------ccc-ccc
Confidence                  6777654100                                                         000 000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                           .....+..                     ...+++||++....++.++|+|||||++||+++.|..||...+..+
T Consensus       165 -----~~~~~~~~---------------------~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~  218 (268)
T cd05063         165 -----YTTSGGKI---------------------PIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE  218 (268)
T ss_pred             -----eeccCCCc---------------------CceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH
Confidence                 00000000                     1123556666667789999999999999999977999998777777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+.+.+            +||..++..||++.+++..
T Consensus       219 ~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~  263 (268)
T cd05063         219 VMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNL  263 (268)
T ss_pred             HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            77776655444443            4788888888888887653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.75  E-value=8e-19  Score=178.03  Aligned_cols=140  Identities=19%  Similarity=0.317  Sum_probs=99.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..++.++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        83 ~~~g~L~~~l~~~~~~--l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~-----------~~kL------  143 (332)
T cd05623          83 YVGGDLLTLLSKFEDR--LPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG-----------HIRL------  143 (332)
T ss_pred             cCCCcHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC-----------CEEE------
Confidence            4689999999885443  58889999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..    ..                                            .+.            
T Consensus       144 ------~DfG~a~~~----~~--------------------------------------------~~~------------  157 (332)
T cd05623         144 ------ADFGSCLKL----ME--------------------------------------------DGT------------  157 (332)
T ss_pred             ------eecchheec----cc--------------------------------------------CCc------------
Confidence                  777776410    00                                            000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+..|+|||++.....                     ....++.++|+|||||++|||++ |+.||...+..+
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~---------------------~~~~~~~~~DvwSlGvil~ell~-g~~Pf~~~~~~~  215 (332)
T cd05623         158 VQSSVAVGTPDYISPEILQAMED---------------------GKGKYGPECDWWSLGVCMYEMLY-GETPFYAESLVE  215 (332)
T ss_pred             ceecccccCccccCHHHHhcccc---------------------CCCCCCCcCCEEeeHHHHHHHhc-CCCCCCCCCHHH
Confidence            00011236667777776542110                     12357889999999999999999 999998877766


Q ss_pred             ecccccc
Q psy17476        241 VVDRVQR  247 (513)
Q Consensus       241 ~~~~i~~  247 (513)
                      ....+..
T Consensus       216 ~~~~i~~  222 (332)
T cd05623         216 TYGKIMN  222 (332)
T ss_pred             HHHHHhC
Confidence            6666643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG4250|consensus

Probab=99.75  E-value=6.4e-19  Score=183.32  Aligned_cols=126  Identities=21%  Similarity=0.370  Sum_probs=98.1

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      ++|||+.+|.+..+..||++..++.++.+++.||.|||++|||||||||.||++-..+....       .-|+       
T Consensus       100 ~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~-------IyKL-------  165 (732)
T KOG4250|consen  100 SGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQS-------IYKL-------  165 (732)
T ss_pred             CCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCce-------EEee-------
Confidence            68999999999988889999999999999999999999999999999999964333221111       1133       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .|||.+|+.                                                 ..+.             
T Consensus       166 -----tDfG~Arel-------------------------------------------------~d~s-------------  178 (732)
T KOG4250|consen  166 -----TDFGAAREL-------------------------------------------------DDNS-------------  178 (732)
T ss_pred             -----ecccccccC-------------------------------------------------CCCC-------------
Confidence                 677777621                                                 0000             


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCC
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYG  234 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~  234 (513)
                      ...+..||..|.+|+++..                         ++.|+..+|.|||||++||..| |..||-
T Consensus       179 ~~~S~vGT~~YLhPel~E~-------------------------q~~y~~tVDLWS~GvtlY~caT-G~lPF~  225 (732)
T KOG4250|consen  179 LFTSLVGTEEYLHPELYER-------------------------QKKYTATVDLWSFGVTLYECAT-GELPFI  225 (732)
T ss_pred             eeeeecCchhhcChHHHhh-------------------------ccCcCceeehhhhhhHHHHHhc-cCCCCC
Confidence            2344558999998887653                         2478999999999999999999 999994

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.75  E-value=7.9e-19  Score=172.13  Aligned_cols=165  Identities=28%  Similarity=0.437  Sum_probs=114.7

Q ss_pred             CCCCcHHHHHHhcC---CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEE
Q psy17476          1 MRHGSLLNYLRRHE---NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVA   77 (513)
Q Consensus         1 ~~~g~L~~~l~~~~---~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~   77 (513)
                      +++|+|..++....   ....+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++   
T Consensus        89 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~-----------~~kl---  154 (273)
T cd05035          89 MKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDM-----------TVCV---  154 (273)
T ss_pred             cCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCC-----------eEEE---
Confidence            46899999986632   122468889999999999999999999999999999996554432           3344   


Q ss_pred             eccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCC
Q psy17476         78 LYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ  157 (513)
Q Consensus        78 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  157 (513)
                               .|||+++....                                                 +.         
T Consensus       155 ---------~dfg~~~~~~~-------------------------------------------------~~---------  167 (273)
T cd05035         155 ---------ADFGLSKKIYS-------------------------------------------------GD---------  167 (273)
T ss_pred             ---------CCccceeeccc-------------------------------------------------cc---------
Confidence                     78887651000                                                 00         


Q ss_pred             ccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC
Q psy17476        158 EHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK  237 (513)
Q Consensus       158 ~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~  237 (513)
                      . ........++.                          .+++||++....++.++|+|||||++|||++.|..||....
T Consensus       168 ~-~~~~~~~~~~~--------------------------~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~  220 (273)
T cd05035         168 Y-YRQGRIAKMPV--------------------------KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE  220 (273)
T ss_pred             c-ccccccccCCc--------------------------cccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence            0 00000000112                          23556666666789999999999999999987889998877


Q ss_pred             cceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 NTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.++.+.+..+.....|            +||..++..||++.+++..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         221 NHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             HHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            77777766655444333            4788888888888887653

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.75  E-value=6.4e-19  Score=181.53  Aligned_cols=137  Identities=16%  Similarity=0.263  Sum_probs=95.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..    +++..++.++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus       125 ~~gg~L~~~~~~~~----~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~-----------~ikL------  183 (371)
T cd05622         125 MPGGDLVNLMSNYD----VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG-----------HLKL------  183 (371)
T ss_pred             CCCCcHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC-----------CEEE------
Confidence            46899999997642    57889999999999999999999999999999996655543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                          ..  .-
T Consensus       184 ------~DfG~a~~~~----------------------------------------------------------~~--~~  197 (371)
T cd05622         184 ------ADFGTCMKMN----------------------------------------------------------KE--GM  197 (371)
T ss_pred             ------EeCCceeEcC----------------------------------------------------------cC--Cc
Confidence                  7777765100                                                          00  00


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+..|+|||.+....                      ....++.++|+||+||++|||++ |..||...+...
T Consensus       198 ~~~~~~~gt~~y~aPE~l~~~~----------------------~~~~~~~~~DiwSlGvilyell~-G~~Pf~~~~~~~  254 (371)
T cd05622         198 VRCDTAVGTPDYISPEVLKSQG----------------------GDGYYGRECDWWSVGVFLYEMLV-GDTPFYADSLVG  254 (371)
T ss_pred             ccccCcccCccccCHHHHhccC----------------------CCccCCCccceeehhHHHHHHHh-CCCCCCCCCHHH
Confidence            0001123566666666543211                      01137889999999999999999 999998777666


Q ss_pred             ecccccc
Q psy17476        241 VVDRVQR  247 (513)
Q Consensus       241 ~~~~i~~  247 (513)
                      ....+..
T Consensus       255 ~~~~i~~  261 (371)
T cd05622         255 TYSKIMN  261 (371)
T ss_pred             HHHHHHc
Confidence            6665543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.75  E-value=7.5e-19  Score=173.18  Aligned_cols=165  Identities=26%  Similarity=0.448  Sum_probs=113.3

Q ss_pred             CCCCcHHHHHHhcCCC-------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCc
Q psy17476          1 MRHGSLLNYLRRHENT-------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPK   73 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~-------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~   73 (513)
                      +++|+|.+++.+....       ..+++..+..++.|++.||+|||+++++||||||+||+++.++           ..+
T Consensus        91 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~-----------~~~  159 (277)
T cd05062          91 MTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-----------TVK  159 (277)
T ss_pred             CCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCC-----------CEE
Confidence            4689999999874321       1356778899999999999999999999999999996655443           334


Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEe
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVM  153 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  153 (513)
                      +            .|||+++...                                                 .++...  
T Consensus       160 l------------~dfg~~~~~~-------------------------------------------------~~~~~~--  176 (277)
T cd05062         160 I------------GDFGMTRDIY-------------------------------------------------ETDYYR--  176 (277)
T ss_pred             E------------CCCCCccccC-------------------------------------------------Ccceee--
Confidence            4            7777765100                                                 000000  


Q ss_pred             ecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCC
Q psy17476        154 DDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPY  233 (513)
Q Consensus       154 ~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf  233 (513)
                              ......++.                          .+|+||.+....++.++|+|||||++|||++.|..||
T Consensus       177 --------~~~~~~~~~--------------------------~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~  222 (277)
T cd05062         177 --------KGGKGLLPV--------------------------RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY  222 (277)
T ss_pred             --------cCCCCccCH--------------------------hhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCC
Confidence                    000001122                          3455666666678999999999999999999778999


Q ss_pred             CCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        234 GRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ...+..++...+..+...+.+            +||..++..||++.+++..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         223 QGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            887777666665544333222            5788888888888888753

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.75  E-value=6e-19  Score=173.14  Aligned_cols=166  Identities=17%  Similarity=0.248  Sum_probs=112.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++...... .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        91 ~~~~~L~~~l~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~-----------~~~l------  152 (272)
T cd06637          91 CGAGSVTDLIKNTKGN-TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA-----------EVKL------  152 (272)
T ss_pred             CCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCC-----------CEEE------
Confidence            4679999999885433 468899999999999999999999999999999996555443           3444      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                          ..... 
T Consensus       153 ------~Dfg~~~~~~----------------------------------------------------------~~~~~-  167 (272)
T cd06637         153 ------VDFGVSAQLD----------------------------------------------------------RTVGR-  167 (272)
T ss_pred             ------ccCCCceecc----------------------------------------------------------ccccc-
Confidence                  7887765100                                                          00000 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        .....|+..|+|||++...+.                     ....++.++|+||+||++|||++ |..||.......
T Consensus       168 --~~~~~g~~~y~aPE~~~~~~~---------------------~~~~~~~~~Dv~slGv~l~el~~-g~~p~~~~~~~~  223 (272)
T cd06637         168 --RNTFIGTPYWMAPEVIACDEN---------------------PDATYDFKSDLWSLGITAIEMAE-GAPPLCDMHPMR  223 (272)
T ss_pred             --CCcccccccccCHhHhccccC---------------------cCCCCCchhhHHHHHHHHHHHHh-CCCCccccCHHH
Confidence              011236667888877643210                     12357889999999999999999 999997554433


Q ss_pred             ecccccccc-ccC----CC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGI-ILE----KP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~-~~~----~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.... +..    .+        +||..++..||++.+++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         224 ALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             HHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence            322222111 110    11        5788889999999888865

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0983|consensus

Probab=99.75  E-value=9.6e-19  Score=163.04  Aligned_cols=136  Identities=23%  Similarity=0.343  Sum_probs=95.0

Q ss_pred             cHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh-cceeccccCcccccccCccccccccCCccCCCceEEEeccccc
Q psy17476          5 SLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER-HNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKA   83 (513)
Q Consensus         5 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~-~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   83 (513)
                      ++..+|++-..  ++++..+-.+...+++||.||-+ |+|||||+||+|||           .|.....|+         
T Consensus       176 C~ekLlkrik~--piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNIL-----------lDe~GniKl---------  233 (391)
T KOG0983|consen  176 CAEKLLKRIKG--PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNIL-----------LDERGNIKL---------  233 (391)
T ss_pred             HHHHHHHHhcC--CchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceE-----------EccCCCEEe---------
Confidence            45666776554  46899999999999999999997 58999999999943           343334444         


Q ss_pred             cCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceee
Q psy17476         84 IEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKV  163 (513)
Q Consensus        84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  163 (513)
                         +|||.+- -.|+..                                                              +
T Consensus       234 ---CDFGIsG-rlvdSk--------------------------------------------------------------A  247 (391)
T KOG0983|consen  234 ---CDFGISG-RLVDSK--------------------------------------------------------------A  247 (391)
T ss_pred             ---ecccccc-eeeccc--------------------------------------------------------------c
Confidence               7777653 111100                                                              0


Q ss_pred             ecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc---ccccccCccccceeeeeeeeecCCCCCCCCC-cc
Q psy17476        164 KDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY---TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NT  239 (513)
Q Consensus       164 ~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~-~~  239 (513)
                      .+               ..          .|+|++||||.|..   ..|+.++||||||++++|+.| |+.||.+.+ ..
T Consensus       248 ht---------------rs----------AGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaT-g~yPy~~c~tdF  301 (391)
T KOG0983|consen  248 HT---------------RS----------AGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELAT-GQYPYKGCKTDF  301 (391)
T ss_pred             cc---------------cc----------cCCccccCccccCCCCCCccchhhhhhhhccchhhhhc-ccCCCCCCCccH
Confidence            00               01          25555566666553   378999999999999999999 999998764 46


Q ss_pred             eeccccccccccCCC
Q psy17476        240 EVVDRVQRGIILEKP  254 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p  254 (513)
                      +++-+|.+..++..|
T Consensus       302 e~ltkvln~ePP~L~  316 (391)
T KOG0983|consen  302 EVLTKVLNEEPPLLP  316 (391)
T ss_pred             HHHHHHHhcCCCCCC
Confidence            777777665554444

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.75  E-value=4.1e-19  Score=174.22  Aligned_cols=58  Identities=22%  Similarity=0.372  Sum_probs=47.8

Q ss_pred             CCCCcHHHHHHhcCCC--CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENT--LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~--~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++.+....  ...++..++.++.|++.||+|||+++|+||||||+|||++.+
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~  136 (269)
T cd05042          77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTAD  136 (269)
T ss_pred             CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCC
Confidence            4689999999886432  124677889999999999999999999999999999655444

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.75  E-value=7.3e-19  Score=173.69  Aligned_cols=164  Identities=28%  Similarity=0.531  Sum_probs=113.8

Q ss_pred             CCCCcHHHHHHhcCCC------------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCc
Q psy17476          1 MRHGSLLNYLRRHENT------------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQ   68 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~------------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~   68 (513)
                      +++|+|.+++.++...            ..+++..++.++.|++.||+|||+++|+||||||+||+++.+          
T Consensus        89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~----------  158 (280)
T cd05092          89 MRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG----------  158 (280)
T ss_pred             CCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC----------
Confidence            4689999999886421            136888999999999999999999999999999999655443          


Q ss_pred             cCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCC
Q psy17476         69 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGA  148 (513)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  148 (513)
                       ...++            .|||++....                                                 ...
T Consensus       159 -~~~kL------------~dfg~~~~~~-------------------------------------------------~~~  176 (280)
T cd05092         159 -LVVKI------------GDFGMSRDIY-------------------------------------------------STD  176 (280)
T ss_pred             -CCEEE------------CCCCceeEcC-------------------------------------------------CCc
Confidence             23344            7777764100                                                 000


Q ss_pred             EEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeec
Q psy17476        149 EYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTC  228 (513)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~  228 (513)
                      ...          ......++                          +.+++||++....++.++|+|||||++|||+++
T Consensus       177 ~~~----------~~~~~~~~--------------------------~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~  220 (280)
T cd05092         177 YYR----------VGGRTMLP--------------------------IRWMPPESILYRKFTTESDIWSFGVVLWEIFTY  220 (280)
T ss_pred             eee----------cCCCcccc--------------------------ccccCHHHhccCCcCchhhHHHHHHHHHHHHcC
Confidence            000          00000011                          234556666777889999999999999999988


Q ss_pred             CCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        229 GKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       229 g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      |..||......+....+..+.....+            .||..++..||.+.+++.
T Consensus       221 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         221 GKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             CCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            99999777666666666555443322            478888888888888764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.75  E-value=7.5e-19  Score=171.89  Aligned_cols=162  Identities=31%  Similarity=0.509  Sum_probs=111.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.... .++++.+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        82 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~-----------~~~L------  143 (262)
T cd05071          82 MSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL-----------VCKV------  143 (262)
T ss_pred             CCCCcHHHHHhhcccc-CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCC-----------cEEe------
Confidence            4689999999875433 368889999999999999999999999999999996555443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++...     .                                            .++         .  
T Consensus       144 ------~dfg~~~~~-----~--------------------------------------------~~~---------~--  157 (262)
T cd05071         144 ------ADFGLARLI-----E--------------------------------------------DNE---------Y--  157 (262)
T ss_pred             ------ccCCceeec-----c--------------------------------------------ccc---------c--
Confidence                  677765400     0                                            000         0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      -......++..|+|                          ||++....++.++|+||+||++|||+|.|..||......+
T Consensus       158 ~~~~~~~~~~~y~~--------------------------PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~  211 (262)
T cd05071         158 TARQGAKFPIKWTA--------------------------PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE  211 (262)
T ss_pred             ccccCCcccceecC--------------------------HhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH
Confidence            00000112333444                          4445555779999999999999999997888998877777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+..+.+.+.+            +||..++..||++.+++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         212 VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             HHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            66666554433322            467777788877777654

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.75  E-value=7.8e-19  Score=177.93  Aligned_cols=56  Identities=14%  Similarity=0.110  Sum_probs=48.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|..++.+..   .+++..++.++.|++.||+|||+++|+||||||+||+++.++
T Consensus        78 ~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~  133 (329)
T cd05618          78 VNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG  133 (329)
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC
Confidence            57899999988764   468899999999999999999999999999999996665553

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0663|consensus

Probab=99.75  E-value=8e-19  Score=167.83  Aligned_cols=140  Identities=19%  Similarity=0.282  Sum_probs=102.4

Q ss_pred             cHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccccc
Q psy17476          5 SLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAI   84 (513)
Q Consensus         5 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   84 (513)
                      ||..+|.....+  +....++.+..|++.|++|||.+.|+||||||||+|++..|           ..||          
T Consensus       162 DLksl~d~m~q~--F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G-----------~lKi----------  218 (419)
T KOG0663|consen  162 DLKSLMETMKQP--FLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKG-----------ILKI----------  218 (419)
T ss_pred             hHHHHHHhccCC--CchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCC-----------cEEe----------
Confidence            788888887654  47789999999999999999999999999999996655555           3466          


Q ss_pred             CCCCcccccCCeEEeeecCccceeeeeccCCCCCCCC-CCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceee
Q psy17476         85 EGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQ-MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKV  163 (513)
Q Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  163 (513)
                        +||||++-                       .+++ .--+..||                                  
T Consensus       219 --aDFGLAR~-----------------------ygsp~k~~T~lVV----------------------------------  239 (419)
T KOG0663|consen  219 --ADFGLARE-----------------------YGSPLKPYTPLVV----------------------------------  239 (419)
T ss_pred             --cccchhhh-----------------------hcCCcccCcceEE----------------------------------
Confidence              99999981                       0000 00011111                                  


Q ss_pred             ecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceecc
Q psy17476        164 KDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVD  243 (513)
Q Consensus       164 ~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~  243 (513)
                           |.-|-|||++                         ++...|+.++|+||+||++.|+++ +++.|++....+.++
T Consensus       240 -----TLWYRaPELL-------------------------LG~~tyst~iDMWSvGCI~aE~l~-~kPlf~G~sE~dQl~  288 (419)
T KOG0663|consen  240 -----TLWYRAPELL-------------------------LGAKTYSTAVDMWSVGCIFAELLT-QKPLFPGKSEIDQLD  288 (419)
T ss_pred             -----EeeecCHHHh-------------------------cCCcccCcchhhhhHHHHHHHHHh-cCCCCCCCchHHHHH
Confidence                 2224455443                         234579999999999999999999 999999988877777


Q ss_pred             ccccccccCCCCCc
Q psy17476        244 RVQRGIILEKPKAW  257 (513)
Q Consensus       244 ~i~~~~~~~~p~~w  257 (513)
                      +|-+...-|....|
T Consensus       289 ~If~llGtPte~iw  302 (419)
T KOG0663|consen  289 KIFKLLGTPSEAIW  302 (419)
T ss_pred             HHHHHhCCCccccC
Confidence            77655555555556

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=9e-19  Score=177.60  Aligned_cols=57  Identities=18%  Similarity=0.196  Sum_probs=49.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+....  +++..++.++.||+.||+|||+++|+||||||+|||++.++
T Consensus        83 ~~g~~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~  139 (331)
T cd05597          83 YVGGDLLTLLSKFEDR--LPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNG  139 (331)
T ss_pred             CCCCcHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCC
Confidence            4789999999875443  58889999999999999999999999999999996655543

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.74  E-value=6.5e-19  Score=176.19  Aligned_cols=165  Identities=26%  Similarity=0.447  Sum_probs=116.2

Q ss_pred             CCCCcHHHHHHhcCC-------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHEN-------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.++|.+...             ...+++..+..++.|++.||.|||++||+||||||+||+++.++        
T Consensus       103 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~--------  174 (304)
T cd05101         103 ASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENN--------  174 (304)
T ss_pred             CCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCC--------
Confidence            368999999987532             11357778999999999999999999999999999996665443        


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                         ..++            .|||+++....                                                  
T Consensus       175 ---~~kl------------~D~g~~~~~~~--------------------------------------------------  189 (304)
T cd05101         175 ---VMKI------------ADFGLARDVNN--------------------------------------------------  189 (304)
T ss_pred             ---cEEE------------CCCccceeccc--------------------------------------------------
Confidence               2344            77777651000                                                  


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                              .... .......++..|+                          +||++....++.++|+||||+++||+++
T Consensus       190 --------~~~~-~~~~~~~~~~~y~--------------------------aPE~~~~~~~~~~~Di~slG~~l~el~~  234 (304)
T cd05101         190 --------IDYY-KKTTNGRLPVKWM--------------------------APEALFDRVYTHQSDVWSFGVLMWEIFT  234 (304)
T ss_pred             --------cccc-ccccCCCCCceee--------------------------CchhhccCCCCchhhHHHHHHHHHHHHc
Confidence                    0000 0000001222344                          4555555678999999999999999998


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +|..||...+..++.+.+..+.+...+            +||...+..||++.+++..
T Consensus       235 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         235 LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             CCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            889999888877777777655544333            5788889999999888764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.74  E-value=8.5e-19  Score=173.34  Aligned_cols=165  Identities=26%  Similarity=0.508  Sum_probs=114.0

Q ss_pred             CCCCcHHHHHHhcCC--------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccC
Q psy17476          1 MRHGSLLNYLRRHEN--------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWP   66 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~--------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~   66 (513)
                      +++|+|.+++.....              ...+++..+..++.|++.||+|||+++|+||||||+||+++.+        
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~--------  160 (283)
T cd05090          89 LNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ--------  160 (283)
T ss_pred             CCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC--------
Confidence            367999999975321              1136788899999999999999999999999999999555443        


Q ss_pred             CccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCC
Q psy17476         67 DQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEK  146 (513)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  146 (513)
                         ...++            .|||+++....                                                 
T Consensus       161 ---~~~kl------------~dfg~~~~~~~-------------------------------------------------  176 (283)
T cd05090         161 ---LHVKI------------SDLGLSREIYS-------------------------------------------------  176 (283)
T ss_pred             ---CcEEe------------ccccccccccC-------------------------------------------------
Confidence               23445            78887751000                                                 


Q ss_pred             CCEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeee
Q psy17476        147 GAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVF  226 (513)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~  226 (513)
                      ....          -......++..|+                          +||++....++.++|+|||||++|||+
T Consensus       177 ~~~~----------~~~~~~~~~~~y~--------------------------aPE~~~~~~~~~~~Dv~slG~il~el~  220 (283)
T cd05090         177 ADYY----------RVQPKSLLPIRWM--------------------------PPEAIMYGKFSSDSDIWSFGVVLWEIF  220 (283)
T ss_pred             Ccce----------ecccCCCccceec--------------------------ChHHhccCCCCchhhhHHHHHHHHHHH
Confidence            0000          0000011223344                          455555557799999999999999999


Q ss_pred             ecCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        227 TCGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       227 t~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.|..||......++.+.+.....++.+            .||..++..||++.+++..
T Consensus       221 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         221 SFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             cCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            8899999877777777777655544433            4788888888888887653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.74  E-value=8.6e-19  Score=173.58  Aligned_cols=56  Identities=20%  Similarity=0.287  Sum_probs=47.2

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++.+.... .++++.++.++.|++.||+|||++||+||||||+||+++.++
T Consensus        90 ~~~l~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~  145 (288)
T cd07863          90 DQDLRTYLDKVPPP-GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG  145 (288)
T ss_pred             ccCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            36899998875433 478999999999999999999999999999999996665543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.74  E-value=1.1e-18  Score=169.77  Aligned_cols=161  Identities=21%  Similarity=0.314  Sum_probs=113.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++...... .+++.++..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        82 ~~~~~l~~~l~~~~~~-~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~-----------~~~l------  143 (257)
T cd08223          82 CEGGDLYHKLKEQKGK-LLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTN-----------IIKV------  143 (257)
T ss_pred             cCCCcHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCC-----------cEEE------
Confidence            3689999999875433 468999999999999999999999999999999996655443           2334      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++..                                                          .....  
T Consensus       144 ------~df~~~~~~----------------------------------------------------------~~~~~--  157 (257)
T cd08223         144 ------GDLGIARVL----------------------------------------------------------ENQCD--  157 (257)
T ss_pred             ------ecccceEEe----------------------------------------------------------cccCC--
Confidence                  677765400                                                          00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++.                          .+++||++....++.++|+||+||+++++++ |+.||...+...
T Consensus       158 -~~~~~~~~~--------------------------~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~-g~~~~~~~~~~~  209 (257)
T cd08223         158 -MASTLIGTP--------------------------YYMSPELFSNKPYNYKSDVWALGCCVYEMAT-LKHAFNAKDMNS  209 (257)
T ss_pred             -ccccccCCc--------------------------CccChhHhcCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCHHH
Confidence             000011333                          3455555566677899999999999999999 999998766655


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+..+..++.+            +||..++..|+++.+++.+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         210 LVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             HHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            55444444332222            4788888899998888865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.74  E-value=7.6e-19  Score=171.40  Aligned_cols=161  Identities=32%  Similarity=0.536  Sum_probs=111.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++++.... .+++..++.++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        82 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~-----------~~~l------  143 (260)
T cd05070          82 MSKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGL-----------VCKI------  143 (260)
T ss_pred             cCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCc-----------eEEe------
Confidence            4689999999875432 368889999999999999999999999999999996555443           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++....                                                 ..+         .. 
T Consensus       144 ------~dfg~~~~~~-------------------------------------------------~~~---------~~-  158 (260)
T cd05070         144 ------ADFGLARLIE-------------------------------------------------DNE---------YT-  158 (260)
T ss_pred             ------CCceeeeecc-------------------------------------------------Ccc---------cc-
Confidence                  6777664100                                                 000         00 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..|                          ++||++....++.++|+||||+++|||++.|..||...+..+
T Consensus       159 -~~~~~~~~~~y--------------------------~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~  211 (260)
T cd05070         159 -ARQGAKFPIKW--------------------------TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE  211 (260)
T ss_pred             -cccCCCCCccc--------------------------cChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence             00000122234                          445555556778999999999999999987899998877777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHH
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESIL  271 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL  271 (513)
                      +.+.+..+.+.+.+            +||..++..||++.++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~  254 (260)
T cd05070         212 VLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQ  254 (260)
T ss_pred             HHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence            77776655444433            46777777777777664

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.74  E-value=8.7e-19  Score=173.29  Aligned_cols=58  Identities=17%  Similarity=0.092  Sum_probs=48.2

Q ss_pred             CCCCcHHHHHHhcC-CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHE-NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      |++|+|.+++.... ....+++..+..++.|++.||+|||+++|+||||||+||+++.+
T Consensus        75 ~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~  133 (280)
T cd05608          75 MNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDND  133 (280)
T ss_pred             CCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence            57899999886532 22247899999999999999999999999999999999655444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG4645|consensus

Probab=99.74  E-value=1.6e-18  Score=190.07  Aligned_cols=162  Identities=23%  Similarity=0.345  Sum_probs=116.6

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .+|+|.+.+...+   ..++...+.+-.|++.|++|||++|||||||||+|||++.+|           .-|.       
T Consensus      1317 ~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g-----------~iK~------- 1375 (1509)
T KOG4645|consen 1317 EGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG-----------LIKY------- 1375 (1509)
T ss_pred             ccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCC-----------cEEe-------
Confidence            6899999887754   257778899999999999999999999999999995555444           2244       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           +|||-+.    .+.                                                             
T Consensus      1376 -----~DFGsa~----ki~------------------------------------------------------------- 1385 (1509)
T KOG4645|consen 1376 -----GDFGSAV----KIK------------------------------------------------------------- 1385 (1509)
T ss_pred             -----eccccee----Eec-------------------------------------------------------------
Confidence                 7777554    000                                                             


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccc---cccccCccccceeeeeeeeecCCCCCCCCCc
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYT---RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN  238 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~  238 (513)
                            +...-+|+|+         +.+   -|+|-+||||+|...   +...+.||||+||++.||+| |+.|+...++
T Consensus      1386 ------~~~~~~~~el---------~~~---~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~t-GkrPW~~~dn 1446 (1509)
T KOG4645|consen 1386 ------NNAQTMPGEL---------QSM---MGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMAT-GKRPWAELDN 1446 (1509)
T ss_pred             ------CchhcCCHHH---------Hhh---cCCchhcCchhhcccccCCCCcchhhhcccceEEEeec-CCCchhhccc
Confidence                  0111122221         111   256666666666643   46788999999999999999 9999986654


Q ss_pred             -ceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        239 -TEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       239 -~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                       -.|+.+|..|..|+.|            .|..+++..|=.+.+||.+
T Consensus      1447 e~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1447 EWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             hhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence             7888999999988888            3666777766666666654

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.74  E-value=1.2e-18  Score=175.28  Aligned_cols=165  Identities=27%  Similarity=0.473  Sum_probs=117.5

Q ss_pred             CCCCcHHHHHHhcCC-------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHEN-------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.+++.....             ...+++..+..++.|++.||+|||++||+||||||+||+++.++        
T Consensus       100 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~--------  171 (314)
T cd05099         100 AAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDN--------  171 (314)
T ss_pred             CCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCC--------
Confidence            468999999987431             11368889999999999999999999999999999996655443        


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                         ..++            .|||+++...-                                                 .
T Consensus       172 ---~~kL------------~Dfg~~~~~~~-------------------------------------------------~  187 (314)
T cd05099         172 ---VMKI------------ADFGLARGVHD-------------------------------------------------I  187 (314)
T ss_pred             ---cEEE------------ccccccccccc-------------------------------------------------c
Confidence               3344            78887762000                                                 0


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                      +           ... ....+.                        +...+|+||++....++.++|+|||||++|||++
T Consensus       188 ~-----------~~~-~~~~~~------------------------~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~  231 (314)
T cd05099         188 D-----------YYK-KTSNGR------------------------LPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFT  231 (314)
T ss_pred             c-----------ccc-ccccCC------------------------CCccccCHHHHccCCcCccchhhHHHHHHHHHHh
Confidence            0           000 000000                        1123466777777788999999999999999998


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .|..||...+..++...+..+.+...+            +||..++..||++.+++..
T Consensus       232 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~  289 (314)
T cd05099         232 LGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEA  289 (314)
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            789999887777777776655443332            4888999999999988764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.74  E-value=1.4e-18  Score=175.92  Aligned_cols=56  Identities=14%  Similarity=0.177  Sum_probs=48.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||+|||+++|+||||||+|||++.++
T Consensus        78 ~~~~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~  133 (327)
T cd05617          78 VNGGDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG  133 (327)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC
Confidence            47899999998764   468999999999999999999999999999999996655443

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=8.5e-19  Score=173.79  Aligned_cols=160  Identities=22%  Similarity=0.305  Sum_probs=108.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.+++.+.... ++++..+..++.|++.||.|||+++|+||||||+||+++.++           ..++      
T Consensus        82 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~-----------~~~l------  143 (285)
T cd05605          82 MNGGDLKFHIYNMGNP-GFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYG-----------HIRI------  143 (285)
T ss_pred             cCCCcHHHHHHhcCcC-CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCC-----------CEEE------
Confidence            4689999998775432 478999999999999999999999999999999995554432           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                 .+          .  
T Consensus       144 ------~Dfg~~~~~~-------------------------------------------------~~----------~--  156 (285)
T cd05605         144 ------SDLGLAVEIP-------------------------------------------------EG----------E--  156 (285)
T ss_pred             ------eeCCCceecC-------------------------------------------------CC----------C--
Confidence                  6777654100                                                 00          0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|                          ||++....++.++|+||+||++|||++ |..||...+...
T Consensus       157 -~~~~~~~~~~y~a--------------------------PE~~~~~~~~~~~Diws~G~~l~el~~-g~~pf~~~~~~~  208 (285)
T cd05605         157 -TIRGRVGTVGYMA--------------------------PEVVKNERYTFSPDWWGLGCLIYEMIE-GKSPFRQRKEKV  208 (285)
T ss_pred             -ccccccCCCCccC--------------------------cHHhcCCCCCccccchhHHHHHHHHHH-CCCCCCCCchhh
Confidence             0001123444444                          455555577899999999999999999 999998655433


Q ss_pred             ec----cccccccccC---CC--------CCcCCCCCCHH-----HHHHHHcC
Q psy17476        241 VV----DRVQRGIILE---KP--------KAWYVGDMSRQ-----RAESILKQ  273 (513)
Q Consensus       241 ~~----~~i~~~~~~~---~p--------~~w~~~~~~R~-----~aeeLL~~  273 (513)
                      ..    ..+.......   .+        +||..++..|+     .+++++.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         209 KREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             HHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence            22    2222111111   11        57888888888     78888775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.74  E-value=1.2e-18  Score=169.36  Aligned_cols=158  Identities=32%  Similarity=0.568  Sum_probs=113.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++...... .+++..+..++.|++.||.|||+++++||||||+||+++.++           .+++      
T Consensus        80 ~~~~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~-----------~~kl------  141 (254)
T cd05083          80 MSKGNLVNFLRTRGRA-LVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDG-----------VAKV------  141 (254)
T ss_pred             CCCCCHHHHHHhcCcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC-----------cEEE------
Confidence            4689999999876533 468889999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...-                                                          ..   
T Consensus       142 ------~Dfg~~~~~~~----------------------------------------------------------~~---  154 (254)
T cd05083         142 ------SDFGLARVGSM----------------------------------------------------------GV---  154 (254)
T ss_pred             ------CCCccceeccc----------------------------------------------------------cC---
Confidence                  77776651000                                                          00   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                         ........|+                          +||++....++.++|+||+||++|||++.|..||......+
T Consensus       155 ---~~~~~~~~y~--------------------------~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~  205 (254)
T cd05083         155 ---DNSKLPVKWT--------------------------APEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE  205 (254)
T ss_pred             ---CCCCCCceec--------------------------CHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH
Confidence               0000112333                          45555556778999999999999999977999998887777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      ....+.++.+++.+            +||...+..||++.+++.
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         206 VKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             HHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            76666665544332            478888888888888765

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.74  E-value=4.8e-19  Score=186.44  Aligned_cols=55  Identities=18%  Similarity=0.255  Sum_probs=44.4

Q ss_pred             CCcHHHHHHhcC-CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccC
Q psy17476          3 HGSLLNYLRRHE-NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSL   57 (513)
Q Consensus         3 ~g~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~   57 (513)
                      .|+|.+++.... ....+++..++.++.|++.||+|||+++||||||||+|||++.
T Consensus       150 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~  205 (440)
T PTZ00036        150 PQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP  205 (440)
T ss_pred             CccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC
Confidence            367888776522 1224788899999999999999999999999999999965543

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.74  E-value=9.6e-19  Score=177.86  Aligned_cols=148  Identities=23%  Similarity=0.412  Sum_probs=99.7

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccccccCCCCcccccCCeE
Q psy17476         18 GGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEY   97 (513)
Q Consensus        18 ~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   97 (513)
                      ++++..+..++.||+.||+|||+++|+||||||+||+++.++           ..++            .|||+++....
T Consensus       169 ~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~-----------~vkL------------~DfG~a~~~~~  225 (337)
T cd05054         169 PLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENN-----------VVKI------------CDFGLARDIYK  225 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCC-----------cEEE------------eccccchhccc
Confidence            468889999999999999999999999999999996555433           2344            77877651000


Q ss_pred             EeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCc
Q psy17476         98 EVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNY  177 (513)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~  177 (513)
                                                                ....+                 ......++..      
T Consensus       226 ------------------------------------------~~~~~-----------------~~~~~~~~~~------  240 (337)
T cd05054         226 ------------------------------------------DPDYV-----------------RKGDARLPLK------  240 (337)
T ss_pred             ------------------------------------------Ccchh-----------------hccCCCCCcc------
Confidence                                                      00000                 0000012223      


Q ss_pred             eeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce-eccccccccccCCC--
Q psy17476        178 VKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE-VVDRVQRGIILEKP--  254 (513)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~-~~~~i~~~~~~~~p--  254 (513)
                                          +||||++....++.++||||+||++|||++.|..||......+ ....+..+.+...+  
T Consensus       241 --------------------y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  300 (337)
T cd05054         241 --------------------WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEY  300 (337)
T ss_pred             --------------------ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCcc
Confidence                                4556666666889999999999999999977999997654333 22333333332222  


Q ss_pred             ----------CCcCCCCCCHHHHHHHHcC
Q psy17476        255 ----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       255 ----------~~w~~~~~~R~~aeeLL~~  273 (513)
                                .||...+..||.+++++..
T Consensus       301 ~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         301 ATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                      5888999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.74  E-value=7.8e-19  Score=171.22  Aligned_cols=162  Identities=33%  Similarity=0.506  Sum_probs=116.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++++.... .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        84 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~-----------~~kl------  145 (261)
T cd05148          84 MEKGSLLAFLRSPEGQ-VLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDL-----------VCKV------  145 (261)
T ss_pred             cccCCHHHHHhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCc-----------eEEE------
Confidence            4689999999885433 468889999999999999999999999999999996665543           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++.....                                                  +.           
T Consensus       146 ------~d~g~~~~~~~--------------------------------------------------~~-----------  158 (261)
T cd05148         146 ------ADFGLARLIKE--------------------------------------------------DV-----------  158 (261)
T ss_pred             ------ccccchhhcCC--------------------------------------------------cc-----------
Confidence                  67776541000                                                  00           


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......++..                          +++||++....++.++|+||||+++|+|++.|..||...+..+
T Consensus       159 ~~~~~~~~~~~--------------------------~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~  212 (261)
T cd05148         159 YLSSDKKIPYK--------------------------WTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE  212 (261)
T ss_pred             ccccCCCCceE--------------------------ecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence            00000011222                          3456666666789999999999999999987899998887777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+++.+            +||..++..||++.+++..
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~  257 (261)
T cd05148         213 VYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREE  257 (261)
T ss_pred             HHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            77777666555443            5788899999998888653

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.74  E-value=1.3e-18  Score=170.84  Aligned_cols=162  Identities=29%  Similarity=0.531  Sum_probs=114.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..++.++.|++.||+|||+++++||||||+||+++.++           ..++      
T Consensus        88 ~~~~~L~~~l~~~~~~--~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~-----------~~~l------  148 (270)
T cd05056          88 APLGELRSYLQVNKYS--LDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPD-----------CVKL------  148 (270)
T ss_pred             CCCCcHHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCC-----------CeEE------
Confidence            4689999999886543  58889999999999999999999999999999996655443           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++...                                                          ..  ..
T Consensus       149 ------~d~g~~~~~~----------------------------------------------------------~~--~~  162 (270)
T cd05056         149 ------GDFGLSRYLE----------------------------------------------------------DE--SY  162 (270)
T ss_pred             ------ccCceeeecc----------------------------------------------------------cc--cc
Confidence                  6776654100                                                          00  00


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......+...                          +++||++....++.++|+||||+++||+++.|..||...+..+
T Consensus       163 ~~~~~~~~~~~--------------------------y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~  216 (270)
T cd05056         163 YKASKGKLPIK--------------------------WMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND  216 (270)
T ss_pred             eecCCCCcccc--------------------------ccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence            00000001122                          3455656666789999999999999999976999998887777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.++.+++.+            +||...+..||++.+++..
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         217 VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             HHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            66666666555443            4688888888888887654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.74  E-value=1.2e-18  Score=170.97  Aligned_cols=170  Identities=25%  Similarity=0.395  Sum_probs=109.8

Q ss_pred             CCCCcHHHHHHhcCCC-CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHENT-LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.+++++.... ...++..++.++.||+.||+|||+++|+||||||+|||++.++           ..++     
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~-----------~~~l-----  140 (268)
T cd05086          77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDL-----------TVKV-----  140 (268)
T ss_pred             CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCc-----------cEEe-----
Confidence            4689999999875321 1356678889999999999999999999999999996554443           3344     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||++......                                                           ..
T Consensus       141 -------~Dfg~~~~~~~~-----------------------------------------------------------~~  154 (268)
T cd05086         141 -------GDYGIGPSRYKE-----------------------------------------------------------DY  154 (268)
T ss_pred             -------cccccccccCcc-----------------------------------------------------------hh
Confidence                   677765410000                                                           00


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                      .-......++..|++||++.....                   -.....++.++|+|||||++|||++++..||...+..
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~-------------------~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~  215 (268)
T cd05086         155 IETEDDKCVPLRWLAPELVGEFHG-------------------GLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR  215 (268)
T ss_pred             hhcccCCcCcccccCchhcccccC-------------------ccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            000011235566777776532110                   0011245789999999999999998688899877766


Q ss_pred             eeccccccccc--cCCC---------------CCcCCCCCCHHHHHHHHc
Q psy17476        240 EVVDRVQRGII--LEKP---------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       240 ~~~~~i~~~~~--~~~p---------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +++..+.++..  ++.|               .|| .++..||++.+++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         216 EVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            65554432211  1111               367 45888888888764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0577|consensus

Probab=99.74  E-value=9.7e-19  Score=177.60  Aligned_cols=161  Identities=21%  Similarity=0.271  Sum_probs=124.2

Q ss_pred             CcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccccc
Q psy17476          4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKA   83 (513)
Q Consensus         4 g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   83 (513)
                      ||-.|.|.-+++  |+.+..+..|+.+++.||+|||+++.||||||+-|||++.+|+           +|+         
T Consensus       110 GSAsDlleVhkK--plqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~-----------VKL---------  167 (948)
T KOG0577|consen  110 GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGL-----------VKL---------  167 (948)
T ss_pred             ccHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCe-----------eee---------
Confidence            777888877766  4689999999999999999999999999999999976666653           233         


Q ss_pred             cCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceee
Q psy17476         84 IEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKV  163 (513)
Q Consensus        84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  163 (513)
                         +|||-+.                                                                      
T Consensus       168 ---aDFGSAs----------------------------------------------------------------------  174 (948)
T KOG0577|consen  168 ---ADFGSAS----------------------------------------------------------------------  174 (948)
T ss_pred             ---ccccchh----------------------------------------------------------------------
Confidence               6776543                                                                      


Q ss_pred             ecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc---ccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        164 KDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY---TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       164 ~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                              .++|--             .+-|+|-|||||+|..   ..|+-++||||+|+++.|+.- .++|+..++...
T Consensus       175 --------i~~PAn-------------sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAE-RkPPlFnMNAMS  232 (948)
T KOG0577|consen  175 --------IMAPAN-------------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMS  232 (948)
T ss_pred             --------hcCchh-------------cccCCccccchhHheeccccccCCccceeeccchhhhhhh-cCCCccCchHHH
Confidence                    111100             1225555666666653   579999999999999999998 999999999999


Q ss_pred             eccccccccccCCC-------------CCcCCCCCCHHHHHHHHcCCCCCceEEEeecC
Q psy17476        241 VVDRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQEDKEGCFVVRNSS  286 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~  286 (513)
                      .+..|.+...|..+             .|....+-.||+++++|.+     .|..|+.+
T Consensus       233 ALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H-----~fv~R~Rp  286 (948)
T KOG0577|consen  233 ALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH-----RFVLRERP  286 (948)
T ss_pred             HHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc-----chhccCCC
Confidence            99999877776666             3666778899999999987     36666654

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.74  E-value=1.2e-18  Score=170.88  Aligned_cols=163  Identities=31%  Similarity=0.550  Sum_probs=112.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..+..++.|++.||+|||+++++||||||+||+++.++           .+++      
T Consensus        87 ~~~~~L~~~~~~~~~~--~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~-----------~~~l------  147 (267)
T cd05066          87 MENGSLDAFLRKHDGQ--FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNL-----------VCKV------  147 (267)
T ss_pred             CCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCC-----------eEEe------
Confidence            4689999999886543  57889999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                          ......
T Consensus       148 ------~dfg~~~~~~----------------------------------------------------------~~~~~~  163 (267)
T cd05066         148 ------SDFGLSRVLE----------------------------------------------------------DDPEAA  163 (267)
T ss_pred             ------CCCCcccccc----------------------------------------------------------ccccee
Confidence                  6777765100                                                          000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......++..                          +++||++....++.++|+|||||++||+++.|..||......+
T Consensus       164 ~~~~~~~~~~~--------------------------y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~  217 (267)
T cd05066         164 YTTRGGKIPIR--------------------------WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD  217 (267)
T ss_pred             eecCCCcccee--------------------------ecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH
Confidence            00000001122                          3455666666789999999999999998866999998777766


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      ....+.++.+.+.+            +||...+..||++.+++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         218 VIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence            76666666554433            467777777777777654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.74  E-value=6.8e-19  Score=178.07  Aligned_cols=58  Identities=24%  Similarity=0.273  Sum_probs=50.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      |++|+|.+++..+... ++++..++.++.|++.||+|||+++||||||||+|||++.++
T Consensus        81 ~~~~~l~~~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~  138 (327)
T cd08227          81 MAYGSAKDLICTHFMD-GMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG  138 (327)
T ss_pred             cCCCcHHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCC
Confidence            5789999999876433 468899999999999999999999999999999997666553

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.74  E-value=1.2e-18  Score=176.72  Aligned_cols=56  Identities=29%  Similarity=0.355  Sum_probs=47.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhc-ceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERH-NYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~-~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||.|||++ +|+||||||+||+++.++
T Consensus        85 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~  141 (331)
T cd06649          85 MDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG  141 (331)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC
Confidence            47899999998765   368889999999999999999986 699999999996665543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.74  E-value=8.1e-19  Score=174.85  Aligned_cols=161  Identities=15%  Similarity=0.144  Sum_probs=102.3

Q ss_pred             cHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccccc
Q psy17476          5 SLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAI   84 (513)
Q Consensus         5 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   84 (513)
                      ++.+++....   ..++..++.++.|++.||+|||+++|+||||||+|||++.+           ..+++          
T Consensus       112 ~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~-----------~~~~l----------  167 (294)
T PHA02882        112 NTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGN-----------NRGYI----------  167 (294)
T ss_pred             CHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC-----------CcEEE----------
Confidence            5555555533   23677899999999999999999999999999999554433           33444          


Q ss_pred             CCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeee
Q psy17476         85 EGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK  164 (513)
Q Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  164 (513)
                        .|||+++.-..    .                                                     .        
T Consensus       168 --~DFGla~~~~~----~-----------------------------------------------------~--------  180 (294)
T PHA02882        168 --IDYGIASHFII----H-----------------------------------------------------G--------  180 (294)
T ss_pred             --EEcCCceeecc----C-----------------------------------------------------C--------
Confidence              78888761000    0                                                     0        


Q ss_pred             cCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc-cee--
Q psy17476        165 DKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TEV--  241 (513)
Q Consensus       165 ~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~-~~~--  241 (513)
                         ....+....            .....|++.+|+||++....++.++||||+||++|||++ |..||..... .++  
T Consensus       181 ---~~~~~~~~~------------~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~-g~~P~~~~~~~~~~~~  244 (294)
T PHA02882        181 ---KHIEYSKEQ------------KDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAG-IKLPWKGFGHNGNLIH  244 (294)
T ss_pred             ---ccccccccc------------ccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCccccchHHHH
Confidence               000000000            000123445566677777788999999999999999999 9999986632 222  


Q ss_pred             ------ccccccccccCC--C--------CCcCCCCCCHHHHHHHHc
Q psy17476        242 ------VDRVQRGIILEK--P--------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       242 ------~~~i~~~~~~~~--p--------~~w~~~~~~R~~aeeLL~  272 (513)
                            +..+.++.....  |        .||..++..||+..+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        245 AAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                  223322221111  1        467778888888887764

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.74  E-value=1.1e-18  Score=170.30  Aligned_cols=162  Identities=32%  Similarity=0.532  Sum_probs=112.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++++.... .+++..+..++.|++.||+|||+++|+||||||+||+++.+           ...++      
T Consensus        82 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~-----------~~~~l------  143 (260)
T cd05069          82 MGKGSLLDFLKEGDGK-YLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDN-----------LVCKI------  143 (260)
T ss_pred             CCCCCHHHHHhhCCCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCC-----------CeEEE------
Confidence            4678999999875433 36888999999999999999999999999999999555443           23344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                 ..+..        .  
T Consensus       144 ------~dfg~~~~~-------------------------------------------------~~~~~--------~--  158 (260)
T cd05069         144 ------ADFGLARLI-------------------------------------------------EDNEY--------T--  158 (260)
T ss_pred             ------CCCccceEc-------------------------------------------------cCCcc--------c--
Confidence                  777766400                                                 00000        0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..|                          ++||++....++.++|+||||+++|||+|.|..||......+
T Consensus       159 -~~~~~~~~~~y--------------------------~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  211 (260)
T cd05069         159 -ARQGAKFPIKW--------------------------TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE  211 (260)
T ss_pred             -ccCCCccchhh--------------------------CCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence             00000122334                          445555556778999999999999999987899998877766


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      ....+..+...+.+            +||..++..||.+++++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         212 VLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             HHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            66666555444332            477788888888777654

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG0603|consensus

Probab=99.74  E-value=5.9e-19  Score=182.04  Aligned_cols=81  Identities=22%  Similarity=0.242  Sum_probs=67.5

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCCCHHHHHHHHHHHhcC-CCCceeceeeEEEeCCeeEEEEccCCC
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSSF  506 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV~E~~~~  506 (513)
                      .++|.+...+|.|+|+.|..+.+..+....++|.......+-.+|+.++... +||||+++.+++.++..+|+|||++.|
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g  400 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDG  400 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehhccc
Confidence            5678888889999999999999987766666665555444556788776665 899999999999999999999999999


Q ss_pred             Cc
Q psy17476        507 RL  508 (513)
Q Consensus       507 Gl  508 (513)
                      |.
T Consensus       401 ~e  402 (612)
T KOG0603|consen  401 GE  402 (612)
T ss_pred             cH
Confidence            86

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.73  E-value=1.4e-18  Score=169.50  Aligned_cols=162  Identities=30%  Similarity=0.551  Sum_probs=113.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.... .+++..+..++.|++.||+|||+++++||||||+||+++.++           ..++      
T Consensus        82 ~~~~~L~~~~~~~~~~-~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~-----------~~~l------  143 (260)
T cd05067          82 MENGSLVDFLKTPEGI-KLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETL-----------CCKI------  143 (260)
T ss_pred             CCCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCC-----------CEEE------
Confidence            4689999999875432 468889999999999999999999999999999996555443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++....                                                 ..+.           
T Consensus       144 ------~dfg~~~~~~-------------------------------------------------~~~~-----------  157 (260)
T cd05067         144 ------ADFGLARLIE-------------------------------------------------DNEY-----------  157 (260)
T ss_pred             ------ccCcceeecC-------------------------------------------------CCCc-----------
Confidence                  6777654100                                                 0000           


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      -......++..|+                          +||++....++.++|+||||+++||+++.|+.||...+..+
T Consensus       158 ~~~~~~~~~~~y~--------------------------~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  211 (260)
T cd05067         158 TAREGAKFPIKWT--------------------------APEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE  211 (260)
T ss_pred             ccccCCccccccc--------------------------CHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH
Confidence            0000011222344                          45555556778999999999999999977999998877777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+.++.+.+.+            +||..++..||++++++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         212 VIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            76666555544433            578888888888888764

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.73  E-value=1.4e-18  Score=169.04  Aligned_cols=164  Identities=27%  Similarity=0.523  Sum_probs=112.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+... ..+++..+..++.|++.||+|||+++++||||||+||+++.++           ..++      
T Consensus        77 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~-----------~~kl------  138 (257)
T cd05040          77 APLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDD-----------KVKI------  138 (257)
T ss_pred             cCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCC-----------EEEe------
Confidence            358999999998653 2468999999999999999999999999999999996555543           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...-                                                          ....+
T Consensus       139 ------~dfg~~~~~~~----------------------------------------------------------~~~~~  154 (257)
T cd05040         139 ------GDFGLMRALPQ----------------------------------------------------------NEDHY  154 (257)
T ss_pred             ------ccccccccccc----------------------------------------------------------cccce
Confidence                  77777651000                                                          00000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      -......++.+|                          ++||++....++.++|+|||||++|||++.|..||...+..+
T Consensus       155 ~~~~~~~~~~~y--------------------------~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  208 (257)
T cd05040         155 VMEEHLKVPFAW--------------------------CAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ  208 (257)
T ss_pred             ecccCCCCCcee--------------------------cCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            000001123334                          455556666789999999999999999988999998766665


Q ss_pred             ecccccc-ccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQR-GIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~-~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+.. ....+.+            .||...+..||++.+++.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         209 ILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             HHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence            5554432 2222221            478888888888888765

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.73  E-value=1.4e-18  Score=170.88  Aligned_cols=165  Identities=27%  Similarity=0.440  Sum_probs=114.5

Q ss_pred             CCCCcHHHHHHhcCC-------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCc
Q psy17476          1 MRHGSLLNYLRRHEN-------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPK   73 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~   73 (513)
                      +++|+|.+++.....       ...+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..+
T Consensus        91 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~-----------~~k  159 (277)
T cd05032          91 MAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDL-----------TVK  159 (277)
T ss_pred             CCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCC-----------CEE
Confidence            368999999987432       11257789999999999999999999999999999996555443           344


Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEe
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVM  153 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  153 (513)
                      +            .|||+++...-                                          .       +.    
T Consensus       160 l------------~dfg~~~~~~~------------------------------------------~-------~~----  174 (277)
T cd05032         160 I------------GDFGMTRDIYE------------------------------------------T-------DY----  174 (277)
T ss_pred             E------------CCcccchhhcc------------------------------------------C-------cc----
Confidence            4            77777651000                                          0       00    


Q ss_pred             ecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCC
Q psy17476        154 DDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPY  233 (513)
Q Consensus       154 ~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf  233 (513)
                            ........++..|                          ++||++....++.++|+|||||++||++|.|..||
T Consensus       175 ------~~~~~~~~~~~~y--------------------------~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  222 (277)
T cd05032         175 ------YRKGGKGLLPVRW--------------------------MAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPY  222 (277)
T ss_pred             ------cccCCCCCccccc--------------------------cCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCC
Confidence                  0000001122334                          44555555677999999999999999998799999


Q ss_pred             CCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        234 GRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ...+..++.+.+..+...+.|            +||...+..|+++.+++..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~  274 (277)
T cd05032         223 QGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS  274 (277)
T ss_pred             ccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            887777777766655444434            5788888888888888753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.73  E-value=1.6e-18  Score=169.27  Aligned_cols=161  Identities=33%  Similarity=0.543  Sum_probs=113.0

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      ++|+|.+++...... .+++..+..++.|++.||.|||+++|+||||||+||+++.++           ..++       
T Consensus        84 ~~~~L~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----------~~~l-------  144 (261)
T cd05068          84 KYGSLLEYLQGGAGR-ALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENN-----------ICKV-------  144 (261)
T ss_pred             cCCcHHHHHhccCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCC-----------CEEE-------
Confidence            589999999875522 368889999999999999999999999999999996555443           3344       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .||++++...     +                                                       ...-
T Consensus       145 -----~dfg~~~~~~-----~-------------------------------------------------------~~~~  159 (261)
T cd05068         145 -----ADFGLARVIK-----E-------------------------------------------------------DIYE  159 (261)
T ss_pred             -----CCcceEEEcc-----C-------------------------------------------------------Cccc
Confidence                 7787765100     0                                                       0000


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      ..........|++|                          |++....++.++|+||||+++|||+|.|+.||......++
T Consensus       160 ~~~~~~~~~~y~aP--------------------------E~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~  213 (261)
T cd05068         160 AREGAKFPIKWTAP--------------------------EAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEV  213 (261)
T ss_pred             ccCCCcCceeccCc--------------------------cccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence            00000012234444                          4455557789999999999999999889999988777777


Q ss_pred             ccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        242 VDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       242 ~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      ...+.+..+++.+            +||..++..||.+.+++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         214 LQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             HHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            7666555444333            467778888888887764

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.73  E-value=1.4e-18  Score=173.75  Aligned_cols=164  Identities=24%  Similarity=0.451  Sum_probs=109.4

Q ss_pred             CCCCcHHHHHHhcCC----------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccc
Q psy17476          1 MRHGSLLNYLRRHEN----------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFIL   64 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~----------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~   64 (513)
                      +++|+|.+++.....                ...+++..+..++.|++.||+|||+++|+||||||+|||++.++     
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~-----  175 (304)
T cd05096         101 MENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENL-----  175 (304)
T ss_pred             CCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCc-----
Confidence            468999999976421                11357778999999999999999999999999999996655443     


Q ss_pred             cCCccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCC
Q psy17476         65 WPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSL  144 (513)
Q Consensus        65 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  144 (513)
                            ..++            .|||+++..                                                 
T Consensus       176 ------~~kl------------~DfG~~~~~-------------------------------------------------  188 (304)
T cd05096         176 ------TIKI------------ADFGMSRNL-------------------------------------------------  188 (304)
T ss_pred             ------cEEE------------CCCccceec-------------------------------------------------
Confidence                  3355            788877510                                                 


Q ss_pred             CCCCEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeee
Q psy17476        145 EKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWE  224 (513)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~e  224 (513)
                      ..++...+          .....++                          ..+||||++....++.++|+|||||++||
T Consensus       189 ~~~~~~~~----------~~~~~~~--------------------------~~y~aPE~~~~~~~~~~~Dv~slG~~l~e  232 (304)
T cd05096         189 YAGDYYRI----------QGRAVLP--------------------------IRWMAWECILMGKFTTASDVWAFGVTLWE  232 (304)
T ss_pred             ccCceeEe----------cCcCCCC--------------------------ccccCHHHHhcCCCCchhhhHHHHHHHHH
Confidence            00000000          0000112                          23456666666778999999999999999


Q ss_pred             eee-cCCCCCCCCCcceecccccc----c-------cccCCC--------CCcCCCCCCHHHHHHHHc
Q psy17476        225 VFT-CGKMPYGRLKNTEVVDRVQR----G-------IILEKP--------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       225 l~t-~g~~pf~~~~~~~~~~~i~~----~-------~~~~~p--------~~w~~~~~~R~~aeeLL~  272 (513)
                      |++ ++..||...+..+++..+..    .       ..+..|        +||..++..||++.++..
T Consensus       233 l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         233 ILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             HHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence            985 36788877666555433321    0       011112        589999999999988754

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0585|consensus

Probab=99.73  E-value=6.8e-19  Score=175.17  Aligned_cols=127  Identities=18%  Similarity=0.299  Sum_probs=88.2

Q ss_pred             CchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccccccCCCCcccccCCeEE
Q psy17476         19 GNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYE   98 (513)
Q Consensus        19 ~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~   98 (513)
                      +.+.+++.|++++++||+|||.+|||||||||+|+|++.+           ..+||            +|||++--.   
T Consensus       207 ls~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~-----------g~VKI------------sDFGVs~~~---  260 (576)
T KOG0585|consen  207 LSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSD-----------GTVKI------------SDFGVSNEF---  260 (576)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCC-----------CcEEe------------eccceeeec---
Confidence            7889999999999999999999999999999999544444           45566            899887510   


Q ss_pred             eeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCce
Q psy17476         99 VMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV  178 (513)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~  178 (513)
                                                                    ..|    ..+..++..   ....||+.++|||.+
T Consensus       261 ----------------------------------------------~~~----~~~~~d~~L---~~tvGTPAF~APE~c  287 (576)
T KOG0585|consen  261 ----------------------------------------------PQG----SDEGSDDQL---SRTVGTPAFFAPELC  287 (576)
T ss_pred             ----------------------------------------------ccC----CccccHHHH---hhcCCCccccchHhh
Confidence                                                          000    000000000   112366666666654


Q ss_pred             eeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceecccccc
Q psy17476        179 KEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQR  247 (513)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~i~~  247 (513)
                      .....                      ..--+.+.||||+|++||.++. |+.||.+....++.++|.+
T Consensus       288 ~~~~~----------------------~~~~g~a~DiWalGVTLYCllf-G~~PF~~~~~~~l~~KIvn  333 (576)
T KOG0585|consen  288 SGGNS----------------------FSYSGFALDIWALGVTLYCLLF-GQLPFFDDFELELFDKIVN  333 (576)
T ss_pred             cCCCC----------------------ccccchhhhhhhhhhhHHHhhh-ccCCcccchHHHHHHHHhc
Confidence            43210                      0122788999999999999998 9999998888888887753

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.73  E-value=1.9e-18  Score=169.47  Aligned_cols=165  Identities=27%  Similarity=0.502  Sum_probs=112.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++......  +++..++.++.|++.||+|||+++++||||||+||+++.+           ...++      
T Consensus        87 ~~~~~L~~~l~~~~~~--~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~-----------~~~kl------  147 (269)
T cd05065          87 MENGALDSFLRQNDGQ--FTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSN-----------LVCKV------  147 (269)
T ss_pred             CCCCcHHHHHhhCCCC--CCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCC-----------CcEEE------
Confidence            3678999999876543  5788999999999999999999999999999999655443           23344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++...-                                                 +       ......
T Consensus       148 ------~dfg~~~~~~~-------------------------------------------------~-------~~~~~~  165 (269)
T cd05065         148 ------SDFGLSRFLED-------------------------------------------------D-------TSDPTY  165 (269)
T ss_pred             ------CCCcccccccc-------------------------------------------------C-------cccccc
Confidence                  67776541000                                                 0       000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ........+..                          +++||++....++.++|+||+||++||+++.|..||...+..+
T Consensus       166 ~~~~~~~~~~~--------------------------y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~  219 (269)
T cd05065         166 TSSLGGKIPIR--------------------------WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD  219 (269)
T ss_pred             ccccCCCccee--------------------------ecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH
Confidence            00000000112                          3456666666789999999999999998877999998877777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+....+.+.+            .||...+..||++.+++.
T Consensus       220 ~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         220 VINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             HHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            77766555444433            477888888888887764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.73  E-value=1.8e-18  Score=168.04  Aligned_cols=164  Identities=30%  Similarity=0.537  Sum_probs=116.4

Q ss_pred             CCCcHHHHHHhcCC------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceE
Q psy17476          2 RHGSLLNYLRRHEN------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVV   75 (513)
Q Consensus         2 ~~g~L~~~l~~~~~------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~   75 (513)
                      ++|+|.+++.....      ...+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++ 
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~-----------~~~l-  146 (262)
T cd00192          79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL-----------VVKI-  146 (262)
T ss_pred             cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCC-----------cEEE-
Confidence            68999999998621      12468999999999999999999999999999999996655543           3344 


Q ss_pred             EEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeec
Q psy17476         76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDD  155 (513)
Q Consensus        76 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  155 (513)
                                 .||+.+....-                                                 ....  .  
T Consensus       147 -----------~dfg~~~~~~~-------------------------------------------------~~~~--~--  162 (262)
T cd00192         147 -----------SDFGLSRDVYD-------------------------------------------------DDYY--R--  162 (262)
T ss_pred             -----------ccccccccccc-------------------------------------------------cccc--c--
Confidence                       67776651000                                                 0000  0  


Q ss_pred             CCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCC
Q psy17476        156 TQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGR  235 (513)
Q Consensus       156 ~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~  235 (513)
                            ......++.                          .+++||++....++.++|+||+||++|||++.|..||..
T Consensus       163 ------~~~~~~~~~--------------------------~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~  210 (262)
T cd00192         163 ------KKTGGKLPI--------------------------RWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPG  210 (262)
T ss_pred             ------cccCCCcCc--------------------------cccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCC
Confidence                  000011222                          345556566667899999999999999999967999998


Q ss_pred             CCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        236 LKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       236 ~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....++.+.+..+.+...+            .||..++..||++.+++..
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         211 LSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             CCHHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            8877777777655554433            4688888888888888753

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.73  E-value=1.5e-18  Score=172.05  Aligned_cols=57  Identities=21%  Similarity=0.122  Sum_probs=48.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++...... ++++..+..++.|++.||.|||+++|+||||||+||+++.+
T Consensus        82 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~  138 (285)
T cd05632          82 MNGGDLKFHIYNMGNP-GFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDY  138 (285)
T ss_pred             ccCccHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCC
Confidence            4689999999875433 47899999999999999999999999999999999555443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.73  E-value=3.3e-18  Score=169.03  Aligned_cols=165  Identities=18%  Similarity=0.229  Sum_probs=112.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|..++.+...  ++++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        84 ~~~~~l~~~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~-----------~~kl------  144 (282)
T cd06643          84 CAGGAVDAVMLELER--PLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDG-----------DIKL------  144 (282)
T ss_pred             cCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCC-----------CEEE------
Confidence            368899998877543  468899999999999999999999999999999996554443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....-                                                         ...   
T Consensus       145 ------~dfg~~~~~~~---------------------------------------------------------~~~---  158 (282)
T cd06643         145 ------ADFGVSAKNTR---------------------------------------------------------TIQ---  158 (282)
T ss_pred             ------ccccccccccc---------------------------------------------------------ccc---
Confidence                  77777651000                                                         000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..|++||++....                     .....++.++|+||+||++|||++ |..||...+..+
T Consensus       159 -~~~~~~~~~~y~aPE~~~~~~---------------------~~~~~~~~~~Dv~slGvil~el~~-g~~p~~~~~~~~  215 (282)
T cd06643         159 -RRDSFIGTPYWMAPEVVMCET---------------------SKDRPYDYKADVWSLGITLIEMAQ-IEPPHHELNPMR  215 (282)
T ss_pred             -ccccccccccccCHhhccccC---------------------CCCCCCCccchhhhHHHHHHHHcc-CCCCccccCHHH
Confidence             000112555677776653211                     012356889999999999999999 999998766544


Q ss_pred             ecccccccccc--CCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIIL--EKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~--~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+......  +.|            +||..++..|+++++++.+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  262 (282)
T cd06643         216 VLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH  262 (282)
T ss_pred             HHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            43333222111  111            5888999999999999876

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG0658|consensus

Probab=99.73  E-value=1.3e-18  Score=168.83  Aligned_cols=129  Identities=22%  Similarity=0.355  Sum_probs=91.2

Q ss_pred             cHHHHHHhc---CCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          5 SLLNYLRRH---ENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         5 ~L~~~l~~~---~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      +|.++++..   +.  .++.-.++-+..|+..||+|||++||+||||||.|+||+.+.          ...||       
T Consensus       107 tL~~~~r~~~~~~~--~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~t----------g~LKi-------  167 (364)
T KOG0658|consen  107 TLYRVIRHYTRANQ--RMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDT----------GVLKI-------  167 (364)
T ss_pred             HHHHHHHHHhhcCC--CCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCC----------CeEEe-------
Confidence            678888852   22  346667899999999999999999999999999997776663          33466       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           +|||-++                                                          ++....+   
T Consensus       168 -----cDFGSAK----------------------------------------------------------~L~~~ep---  181 (364)
T KOG0658|consen  168 -----CDFGSAK----------------------------------------------------------VLVKGEP---  181 (364)
T ss_pred             -----ccCCcce----------------------------------------------------------eeccCCC---
Confidence                 8888776                                                          1111111   


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                             ...|+-..|++++|.+                   ++.+.|+.+.||||.||++.||+- |++.|++.+..+.
T Consensus       182 -------niSYicSRyYRaPELi-------------------fga~~Yt~~IDiWSaGCV~aELl~-g~plFpG~s~~dQ  234 (364)
T KOG0658|consen  182 -------NISYICSRYYRAPELI-------------------FGATEYTTSIDIWSAGCVMAELLK-GQPLFPGDSSVDQ  234 (364)
T ss_pred             -------ceeEEEeccccCHHHH-------------------cCccccCceeEEhhhhHHHHHHhc-CCcccCCCCHHHH
Confidence                   1233333333322211                   456789999999999999999999 9999998776555


Q ss_pred             cccc
Q psy17476        242 VDRV  245 (513)
Q Consensus       242 ~~~i  245 (513)
                      +..|
T Consensus       235 L~eI  238 (364)
T KOG0658|consen  235 LVEI  238 (364)
T ss_pred             HHHH
Confidence            4444

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.73  E-value=1.9e-18  Score=171.63  Aligned_cols=164  Identities=25%  Similarity=0.446  Sum_probs=114.1

Q ss_pred             CCCCcHHHHHHhcCC---------------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHEN---------------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.....                     ..++++..+..++.|++.||.|||+++|+||||||+||+++.+ 
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~-  163 (290)
T cd05045          85 AKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEG-  163 (290)
T ss_pred             cCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCC-
Confidence            367999999876321                     1246888999999999999999999999999999999554433 


Q ss_pred             ccccccCCccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCC
Q psy17476         60 ISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEG  139 (513)
Q Consensus        60 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (513)
                                ...++            .|||+++...                                           
T Consensus       164 ----------~~~kl------------~dfg~~~~~~-------------------------------------------  178 (290)
T cd05045         164 ----------RKMKI------------SDFGLSRDVY-------------------------------------------  178 (290)
T ss_pred             ----------CcEEe------------cccccccccc-------------------------------------------
Confidence                      23344            6777765100                                           


Q ss_pred             CCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccce
Q psy17476        140 GDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYG  219 (513)
Q Consensus       140 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G  219 (513)
                           ..+.           ........++.                          .+++||++....++.++|+||||
T Consensus       179 -----~~~~-----------~~~~~~~~~~~--------------------------~y~apE~~~~~~~~~~~Di~slG  216 (290)
T cd05045         179 -----EEDS-----------YVKRSKGRIPV--------------------------KWMAIESLFDHIYTTQSDVWSFG  216 (290)
T ss_pred             -----Cccc-----------hhcccCCCCCc--------------------------cccCHHHHccCCcchHhHHHHHH
Confidence                 0000           00000001122                          23556666666789999999999


Q ss_pred             eeeeeeeecCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        220 VLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       220 ~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +++|||++.|..||......++.+.+.++.+.+.+            .||..++..||++.+++.
T Consensus       217 ~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         217 VLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             HHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            99999998799999888877777777665554444            478888888888888765

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.73  E-value=2.6e-18  Score=168.54  Aligned_cols=58  Identities=21%  Similarity=0.312  Sum_probs=47.6

Q ss_pred             CCCCcHHHHHHhcCC--CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHEN--TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      |++|+|.++|+....  ....++..+..++.|++.||+|||+++++||||||+||+++.+
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~  136 (269)
T cd05087          77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTAD  136 (269)
T ss_pred             CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC
Confidence            578999999987432  2235677888999999999999999999999999999655544

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.73  E-value=1.9e-18  Score=167.98  Aligned_cols=166  Identities=18%  Similarity=0.322  Sum_probs=109.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+...  .+++..+..++.|++.||+|||+++|+||||||+||+++.++..    .+.....++      
T Consensus        82 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~----~~~~~~~kl------  149 (259)
T cd05037          82 VKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLN----EGYVPFIKL------  149 (259)
T ss_pred             CCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccc----cCCceeEEe------
Confidence            478999999998664  35788999999999999999999999999999999666554310    000001233      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||++....                                                         .      
T Consensus       150 ------~Dfg~a~~~~---------------------------------------------------------~------  160 (259)
T cd05037         150 ------SDPGIPITVL---------------------------------------------------------S------  160 (259)
T ss_pred             ------CCCCcccccc---------------------------------------------------------c------
Confidence                  6676654100                                                         0      


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        .....+...|++||++....                        ..++.++|+||+||++||+++.|..||...+..+
T Consensus       161 --~~~~~~~~~y~aPE~~~~~~------------------------~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~  214 (259)
T cd05037         161 --REERVERIPWIAPECIRNGQ------------------------ASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE  214 (259)
T ss_pred             --ccccccCCCccChhhhcCCC------------------------CCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh
Confidence              00011334456665543210                        1568899999999999999985688887665443


Q ss_pred             eccccccccccCCC----------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ...........+.+          +||..++..||++.+++..
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  257 (259)
T cd05037         215 KERFYQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRD  257 (259)
T ss_pred             HHHHHhcCCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHh
Confidence            33333322222222          5788888888888887753

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0696|consensus

Probab=99.73  E-value=8.6e-19  Score=171.32  Aligned_cols=131  Identities=20%  Similarity=0.378  Sum_probs=105.7

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .||+|--+|.+-++   +.++.+..+|.+||-||=+||++|||+||||..||+++.+|           ..||       
T Consensus       433 nGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eG-----------HiKi-------  491 (683)
T KOG0696|consen  433 NGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG-----------HIKI-------  491 (683)
T ss_pred             cCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCC-----------ceEe-------
Confidence            58999999998764   36889999999999999999999999999999995555554           4455       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .|||+++.-..                                                        +.     .
T Consensus       492 -----~DFGmcKEni~--------------------------------------------------------~~-----~  505 (683)
T KOG0696|consen  492 -----ADFGMCKENIF--------------------------------------------------------DG-----V  505 (683)
T ss_pred             -----eeccccccccc--------------------------------------------------------CC-----c
Confidence                 89999882111                                                        00     0


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      ..+..+||+.|++||.                          |.|.+|+.++|+||||+++|||+. |++||++.+..++
T Consensus       506 TTkTFCGTPdYiAPEI--------------------------i~YqPYgksvDWWa~GVLLyEmla-GQpPFdGeDE~el  558 (683)
T KOG0696|consen  506 TTKTFCGTPDYIAPEI--------------------------IAYQPYGKSVDWWAFGVLLYEMLA-GQPPFDGEDEDEL  558 (683)
T ss_pred             ceeeecCCCcccccce--------------------------EEecccccchhHHHHHHHHHHHHc-CCCCCCCCCHHHH
Confidence            2245667777777665                          456799999999999999999999 9999999999999


Q ss_pred             ccccc
Q psy17476        242 VDRVQ  246 (513)
Q Consensus       242 ~~~i~  246 (513)
                      .+.|.
T Consensus       559 F~aI~  563 (683)
T KOG0696|consen  559 FQAIM  563 (683)
T ss_pred             HHHHH
Confidence            88875

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.72  E-value=2e-18  Score=167.53  Aligned_cols=161  Identities=18%  Similarity=0.301  Sum_probs=112.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.... .+++..++.++.|++.||+|||+++|+||||||+||+++.++          ...++      
T Consensus        81 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~----------~~~~l------  143 (256)
T cd08220          81 APGGTLAEYIQKRCNS-LLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHK----------MVVKI------  143 (256)
T ss_pred             CCCCCHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC----------CEEEE------
Confidence            4689999999885433 468889999999999999999999999999999996554332          22334      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++....                                                         +.. .  
T Consensus       144 ------~d~~~~~~~~---------------------------------------------------------~~~-~--  157 (256)
T cd08220         144 ------GDFGISKILS---------------------------------------------------------SKS-K--  157 (256)
T ss_pred             ------ccCCCceecC---------------------------------------------------------CCc-c--
Confidence                  6776654100                                                         000 0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        .....++..|++||.                          +....++.++|+||+|+++|+|++ |..||...+...
T Consensus       158 --~~~~~~~~~y~aPE~--------------------------~~~~~~~~~~Dv~slG~~l~~l~~-~~~~~~~~~~~~  208 (256)
T cd08220         158 --AYTVVGTPCYISPEL--------------------------CEGKPYNQKSDIWALGCVLYELAS-LKRAFEAANLPA  208 (256)
T ss_pred             --ccccccCCcccCchh--------------------------ccCCCCCcccchHHHHHHHHHHHh-CCCCcccCchHH
Confidence              000113445555554                          444567889999999999999999 999998776655


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+..+...+.+            .||..++..||++.+++.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         209 LVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             HHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            55554433322222            5788899999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG0671|consensus

Probab=99.72  E-value=9.4e-18  Score=163.31  Aligned_cols=150  Identities=17%  Similarity=0.196  Sum_probs=97.2

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      |-|+++||+.+... +++.+.++.|++|++.+++|||+.+++|.||||+|||.-..+..++......             
T Consensus       174 G~S~~dFlk~N~y~-~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~-------------  239 (415)
T KOG0671|consen  174 GLSTFDFLKENNYI-PFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKK-------------  239 (415)
T ss_pred             ChhHHHHhccCCcc-ccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCc-------------
Confidence            44899999997654 6788899999999999999999999999999999954333221111110000             


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                         ..+.                                .......|.+.||+....+                     .
T Consensus       240 ---~~~~--------------------------------r~~ks~~I~vIDFGsAtf~---------------------~  263 (415)
T KOG0671|consen  240 ---VCFI--------------------------------RPLKSTAIKVIDFGSATFD---------------------H  263 (415)
T ss_pred             ---ccee--------------------------------ccCCCcceEEEecCCccee---------------------c
Confidence               0000                                0111223334444332111                     0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .         -.+..      +..+.|         .|||+|...+++..+||||+||+|.|++| |...|...++.|-+
T Consensus       264 e---------~hs~i------VsTRHY---------RAPEViLgLGwS~pCDvWSiGCIL~Elyt-G~~LFqtHen~EHL  318 (415)
T KOG0671|consen  264 E---------HHSTI------VSTRHY---------RAPEVILGLGWSQPCDVWSIGCILVELYT-GETLFQTHENLEHL  318 (415)
T ss_pred             c---------Cccee------eecccc---------CCchheeccCcCCccCceeeeeEEEEeec-cceecccCCcHHHH
Confidence            0         00111      122333         37888899999999999999999999999 99999988887755


Q ss_pred             ccccc
Q psy17476        243 DRVQR  247 (513)
Q Consensus       243 ~~i~~  247 (513)
                      .+.+.
T Consensus       319 aMMer  323 (415)
T KOG0671|consen  319 AMMER  323 (415)
T ss_pred             HHHHH
Confidence            44443

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.72  E-value=1.6e-18  Score=171.91  Aligned_cols=57  Identities=18%  Similarity=0.199  Sum_probs=48.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++...... ++++..+..++.|++.||.|||+++|+||||||+||+++.+
T Consensus        82 ~~g~~L~~~l~~~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~  138 (285)
T cd05630          82 MNGGDLKFHIYHMGEA-GFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDH  138 (285)
T ss_pred             cCCCcHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCC
Confidence            4689999999765433 47888999999999999999999999999999999655443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.72  E-value=1.1e-18  Score=174.50  Aligned_cols=54  Identities=20%  Similarity=0.316  Sum_probs=46.3

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +|+|.+++.++...  +++..++.++.|++.||+|||+++|+||||||+|||++.+
T Consensus        86 ~~~l~~~~~~~~~~--~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~  139 (303)
T cd07869          86 HTDLCQYMDKHPGG--LHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDT  139 (303)
T ss_pred             CcCHHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence            57899999876543  5888999999999999999999999999999999655444

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.72  E-value=2.2e-18  Score=170.20  Aligned_cols=166  Identities=18%  Similarity=0.265  Sum_probs=112.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++...... .+++..++.++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       101 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~-----------~~~l------  162 (282)
T cd06636         101 CGAGSVTDLVKNTKGN-ALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENA-----------EVKL------  162 (282)
T ss_pred             CCCCcHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-----------CEEE------
Confidence            4678999999875543 468889999999999999999999999999999996665543           2233      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++.....                                                          ....+
T Consensus       163 ------~dfg~~~~~~~----------------------------------------------------------~~~~~  178 (282)
T cd06636         163 ------VDFGVSAQLDR----------------------------------------------------------TVGRR  178 (282)
T ss_pred             ------eeCcchhhhhc----------------------------------------------------------cccCC
Confidence                  67776541000                                                          00000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                         ....|+..|+|||.+....                     -....++.++|+||+||++|||++ |..||......+
T Consensus       179 ---~~~~~~~~y~aPE~l~~~~---------------------~~~~~~~~~~DvwslG~~l~el~~-g~~p~~~~~~~~  233 (282)
T cd06636         179 ---NTFIGTPYWMAPEVIACDE---------------------NPDATYDYRSDIWSLGITAIEMAE-GAPPLCDMHPMR  233 (282)
T ss_pred             ---CcccccccccCHhhcCccc---------------------CcCcCCCcccchhHHHHHHHHHHh-CCCCccccCHHh
Confidence               0122566677777653211                     012357889999999999999999 999997655433


Q ss_pred             eccccccccccC-----CC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILE-----KP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~-----~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.......     .+        +||..++..||++.++|.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~  279 (282)
T cd06636         234 ALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH  279 (282)
T ss_pred             hhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence            332222211111     01        5799999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.72  E-value=2e-18  Score=170.99  Aligned_cols=55  Identities=20%  Similarity=0.263  Sum_probs=42.9

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      ++|.| +.+.+...  ++++..++.++.|++.||+|||+++|+||||||+||+++.++
T Consensus        83 ~~~~l-~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~  137 (287)
T cd07848          83 EKNML-ELLEEMPN--GVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND  137 (287)
T ss_pred             CCCHH-HHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            44444 44544332  468889999999999999999999999999999996655443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.72  E-value=2e-18  Score=172.95  Aligned_cols=165  Identities=25%  Similarity=0.440  Sum_probs=113.9

Q ss_pred             CCCCcHHHHHHhcCCC-------------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHENT-------------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~-------------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.+++.++...             -.+++..+..++.|++.||+|||+++++||||||+||+++.++        
T Consensus       106 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~--------  177 (307)
T cd05098         106 ASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN--------  177 (307)
T ss_pred             CCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCC--------
Confidence            3689999999875321             1367889999999999999999999999999999996555443        


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                         ..++            .|||+++...-                                                 .
T Consensus       178 ---~~kL------------~dfg~a~~~~~-------------------------------------------------~  193 (307)
T cd05098         178 ---VMKI------------ADFGLARDIHH-------------------------------------------------I  193 (307)
T ss_pred             ---cEEE------------CCCcccccccc-------------------------------------------------c
Confidence               3344            67776651000                                                 0


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                      +.          ........++..|                          |+||++....++.++|+||+||++|||++
T Consensus       194 ~~----------~~~~~~~~~~~~y--------------------------~aPE~~~~~~~~~~~DvwslG~~l~el~~  237 (307)
T cd05098         194 DY----------YKKTTNGRLPVKW--------------------------MAPEALFDRIYTHQSDVWSFGVLLWEIFT  237 (307)
T ss_pred             ch----------hhccccCCCccce--------------------------eChHHhccCCCCcHHHHHHHHHHHHHHHc
Confidence            00          0000000011233                          45555555677899999999999999998


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .|..||...+..++...+..+.+.+.+            +||...+..||++.+++..
T Consensus       238 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         238 LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             CCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            789999877776766666655544333            4778888888888887764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.72  E-value=3.4e-18  Score=166.87  Aligned_cols=162  Identities=30%  Similarity=0.563  Sum_probs=111.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.... .+++..++.++.|++.||.|||+++++||||||+||+++.++           ..++      
T Consensus        82 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~-----------~~~l------  143 (260)
T cd05073          82 MAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL-----------VCKI------  143 (260)
T ss_pred             CCCCcHHHHHHhCCcc-ccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC-----------cEEE------
Confidence            4689999999875432 367889999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++...                                                 ..+...          
T Consensus       144 ------~d~~~~~~~-------------------------------------------------~~~~~~----------  158 (260)
T cd05073         144 ------ADFGLARVI-------------------------------------------------EDNEYT----------  158 (260)
T ss_pred             ------CCCcceeec-------------------------------------------------cCCCcc----------
Confidence                  677765410                                                 000000          


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..|+                          +||++....++.++|+|||||++|+++|.|..||...+...
T Consensus       159 -~~~~~~~~~~y~--------------------------~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~  211 (260)
T cd05073         159 -AREGAKFPIKWT--------------------------APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE  211 (260)
T ss_pred             -cccCCccccccc--------------------------CHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH
Confidence             000001222344                          45555556778899999999999999987899998877666


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+.++...+.+            +||...+..||++.+++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         212 VIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             HHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence            66666555444433            477778888887777654

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.72  E-value=2e-18  Score=173.65  Aligned_cols=53  Identities=19%  Similarity=0.312  Sum_probs=44.0

Q ss_pred             CCcHHHHHHhcC------CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccc
Q psy17476          3 HGSLLNYLRRHE------NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPS   55 (513)
Q Consensus         3 ~g~L~~~l~~~~------~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~   55 (513)
                      +++|.+++..+.      ....+++..++.++.|++.||+|||+++|+||||||+|||+
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~  141 (317)
T cd07868          83 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILV  141 (317)
T ss_pred             CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEE
Confidence            568888876532      12247888999999999999999999999999999999655

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.72  E-value=3.2e-18  Score=173.73  Aligned_cols=165  Identities=25%  Similarity=0.440  Sum_probs=116.4

Q ss_pred             CCCCcHHHHHHhcCC-------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHEN-------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.++|.+...             ...+++..+..++.|++.||+|||+++|+||||||+||+++.++        
T Consensus       100 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~--------  171 (334)
T cd05100         100 ASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDN--------  171 (334)
T ss_pred             CCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC--------
Confidence            468999999987431             11257788899999999999999999999999999996665543        


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                         ..++            .|||+++...                                                 ..
T Consensus       172 ---~~kL------------~Dfg~~~~~~-------------------------------------------------~~  187 (334)
T cd05100         172 ---VMKI------------ADFGLARDVH-------------------------------------------------NI  187 (334)
T ss_pred             ---cEEE------------CCcccceecc-------------------------------------------------cc
Confidence               2344            7777765100                                                 00


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                                ..........++.                          .+|+||++....++.++|+|||||++|||++
T Consensus       188 ----------~~~~~~~~~~~~~--------------------------~y~aPE~~~~~~~~~~~Di~slG~il~el~~  231 (334)
T cd05100         188 ----------DYYKKTTNGRLPV--------------------------KWMAPEALFDRVYTHQSDVWSFGVLLWEIFT  231 (334)
T ss_pred             ----------cccccccCCCcCc--------------------------eEcCHHHhccCCcCchhhhHHHHHHHHHHHh
Confidence                      0000000000112                          2455666666778999999999999999998


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .|..||...+..++...+..+.+.+.+            +||...+..||++.+++..
T Consensus       232 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         232 LGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             cCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            789999888777777766555444333            5888899999999998875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.72  E-value=2.1e-18  Score=167.40  Aligned_cols=162  Identities=29%  Similarity=0.566  Sum_probs=111.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+...  .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        75 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~-----------~~kl------  135 (252)
T cd05084          75 VQGGDFLTFLRTEGP--RLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKN-----------VLKI------  135 (252)
T ss_pred             ccCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCC-----------cEEE------
Confidence            368999999987543  358889999999999999999999999999999996655443           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++...                                                 .+. . .   .    
T Consensus       136 ------~dfg~~~~~~-------------------------------------------------~~~-~-~---~----  151 (252)
T cd05084         136 ------SDFGMSREEE-------------------------------------------------DGV-Y-A---S----  151 (252)
T ss_pred             ------CccccCcccc-------------------------------------------------ccc-c-c---c----
Confidence                  6777665100                                                 000 0 0   0    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ..........|                          ++||.+....++.++|+||+||++|||++.|..||......+
T Consensus       152 -~~~~~~~~~~y--------------------------~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~  204 (252)
T cd05084         152 -TGGMKQIPVKW--------------------------TAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ  204 (252)
T ss_pred             -cCCCCCCceee--------------------------cCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH
Confidence             00000011123                          455556666789999999999999999977899998776665


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      ....+....+.+.+            +||..++..||++.+++.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         205 TREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             HHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            55555444333333            577888888888888764

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.72  E-value=2.3e-18  Score=169.97  Aligned_cols=57  Identities=16%  Similarity=0.150  Sum_probs=48.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++...... ++++..+..++.|++.||+|||+++|+||||||+||+++.+
T Consensus        75 ~~g~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~  131 (277)
T cd05607          75 MNGGDLKYHIYNVGER-GLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQ  131 (277)
T ss_pred             CCCCCHHHHHHhcccc-CCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCC
Confidence            4689999998775543 47888999999999999999999999999999999665544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.72  E-value=2.1e-18  Score=191.43  Aligned_cols=174  Identities=20%  Similarity=0.273  Sum_probs=111.1

Q ss_pred             CCCCcHHHHHHhcCC-CCCCchhHHHHHHHHHHHHHHHHHhc-------ceeccccCcccccccCcccccccc------C
Q psy17476          1 MRHGSLLNYLRRHEN-TLGGNVGLLLDMCIQVCKGMAYLERH-------NYIHRETKKSLYPSSLNEISFILW------P   66 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~gl~ylH~~-------~iiHrdikp~N~~~~~~~~~~~~l------~   66 (513)
                      +++|+|.++|.+... ...+++..++.|+.||+.||+|||+.       +||||||||+|||++.+......+      .
T Consensus        96 ~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~  175 (1021)
T PTZ00266         96 CDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNL  175 (1021)
T ss_pred             CCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccccccc
Confidence            468999999987432 22478999999999999999999984       499999999998776532100000      0


Q ss_pred             CccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCC
Q psy17476         67 DQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEK  146 (513)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  146 (513)
                      +.....++            .|||+++....                                                 
T Consensus       176 ng~~iVKL------------sDFGlAr~l~~-------------------------------------------------  194 (1021)
T PTZ00266        176 NGRPIAKI------------GDFGLSKNIGI-------------------------------------------------  194 (1021)
T ss_pred             CCCCceEE------------ccCCccccccc-------------------------------------------------
Confidence            11112233            56666541000                                                 


Q ss_pred             CCEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeee
Q psy17476        147 GAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVF  226 (513)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~  226 (513)
                                 ..  ......|+..|+|||++..                        ....++.++|||||||++|||+
T Consensus       195 -----------~s--~~~s~vGTp~YmAPEvL~g------------------------e~~~~s~KSDVWSLG~ILYELL  237 (1021)
T PTZ00266        195 -----------ES--MAHSCVGTPYYWSPELLLH------------------------ETKSYDDKSDMWALGCIIYELC  237 (1021)
T ss_pred             -----------cc--cccccCCCccccCHHHHhc------------------------cCCCCCchhHHHHHHHHHHHHH
Confidence                       00  0001124445555544321                        1235788999999999999999


Q ss_pred             ecCCCCCCCCCc-ceeccccccccccCCC-----------CCcCCCCCCHHHHHHHHcC
Q psy17476        227 TCGKMPYGRLKN-TEVVDRVQRGIILEKP-----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       227 t~g~~pf~~~~~-~~~~~~i~~~~~~~~p-----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      + |..||...+. ..++..+..+..++.+           .||...+..||++.++|..
T Consensus       238 T-Gk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h  295 (1021)
T PTZ00266        238 S-GKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGY  295 (1021)
T ss_pred             H-CCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence            9 9999976554 3333334333333322           4788999999999999864

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.72  E-value=2.5e-18  Score=193.81  Aligned_cols=55  Identities=11%  Similarity=0.058  Sum_probs=47.9

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|.++|.+...  ++++..++.+++||+.||+|||++|||||||||+|||++..+
T Consensus        63 ~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~  117 (793)
T PLN00181         63 DVSLRQWLDNPDR--SVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFN  117 (793)
T ss_pred             CccHHHHHhcccc--cccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccC
Confidence            6799999986543  468899999999999999999999999999999997776544

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.72  E-value=3.9e-18  Score=170.08  Aligned_cols=158  Identities=18%  Similarity=0.320  Sum_probs=107.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.    .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        99 ~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~-----------~~kl------  157 (296)
T cd06654          99 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-----------SVKL------  157 (296)
T ss_pred             cCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC-----------CEEE------
Confidence            4789999999764    257889999999999999999999999999999996554443           3445      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....-                                                          ...  
T Consensus       158 ------~dfg~~~~~~~----------------------------------------------------------~~~--  171 (296)
T cd06654         158 ------TDFGFCAQITP----------------------------------------------------------EQS--  171 (296)
T ss_pred             ------Cccccchhccc----------------------------------------------------------ccc--
Confidence                  77777651000                                                          000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|                          ++||++....++.++|+|||||++|+|++ |..||.......
T Consensus       172 -~~~~~~~~~~y--------------------------~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~-g~~pf~~~~~~~  223 (296)
T cd06654         172 -KRSTMVGTPYW--------------------------MAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLR  223 (296)
T ss_pred             -ccCcccCCccc--------------------------cCHHHHcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence             00001133344                          44555555567899999999999999999 999997665433


Q ss_pred             ecccccccccc--CCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIIL--EKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~--~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.....+  +.+            +||..++..||.+.+++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         224 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             hHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence            22222111111  111            5788899999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.72  E-value=2.7e-18  Score=166.88  Aligned_cols=162  Identities=38%  Similarity=0.663  Sum_probs=114.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++..+...  ++++.+..++.|++.||+|||+++++||||||+||+++.++           ..++      
T Consensus        81 ~~~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~-----------~~~l------  141 (256)
T cd05112          81 MEHGCLSDYLRAQRGK--FSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQ-----------VVKV------  141 (256)
T ss_pred             CCCCcHHHHHHhCccC--CCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCC-----------eEEE------
Confidence            4689999999876543  57889999999999999999999999999999996655443           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++...    .                                                     +   ...
T Consensus       142 ------~d~g~~~~~----~-----------------------------------------------------~---~~~  155 (256)
T cd05112         142 ------SDFGMTRFV----L-----------------------------------------------------D---DQY  155 (256)
T ss_pred             ------CCCcceeec----c-----------------------------------------------------c---Ccc
Confidence                  677665410    0                                                     0   000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......++.+|+                          +||++....++.++|+||+|+++|||++.|..||......+
T Consensus       156 ~~~~~~~~~~~~~--------------------------aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~  209 (256)
T cd05112         156 TSSTGTKFPVKWS--------------------------SPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE  209 (256)
T ss_pred             cccCCCccchhhc--------------------------CHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence            0000001222344                          45555556778899999999999999987899998877777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.+.+.++.++..+            .||...+..||++.+++..
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         210 VVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             HHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence            77776665554433            4788888899998888753

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.72  E-value=4e-18  Score=166.81  Aligned_cols=165  Identities=24%  Similarity=0.366  Sum_probs=110.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++++||||||+||+++.++           ..++      
T Consensus        88 ~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~-----------~~~l------  147 (267)
T cd06628          88 VPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKG-----------GIKI------  147 (267)
T ss_pred             cCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCC-----------CEEe------
Confidence            36889999998864   357889999999999999999999999999999996554433           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...-    ...                                                   .....
T Consensus       148 ------~dfg~~~~~~~----~~~---------------------------------------------------~~~~~  166 (267)
T cd06628         148 ------SDFGISKKLEA----NSL---------------------------------------------------STKTN  166 (267)
T ss_pred             ------cccCCCccccc----ccc---------------------------------------------------cCCcc
Confidence                  67776651000    000                                                   00000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      -......|+.                          .+++||++....++.++|+||+||++|+|++ |..||...+..+
T Consensus       167 ~~~~~~~~~~--------------------------~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~  219 (267)
T cd06628         167 GARPSLQGSV--------------------------FWMAPEVVKQTSYTRKADIWSLGCLVVEMLT-GKHPFPDCTQLQ  219 (267)
T ss_pred             ccccccCCCc--------------------------CccChhHhccCCCCchhhhHHHHHHHHHHhh-CCCCCCCccHHH
Confidence            0000011333                          3445555566677889999999999999999 999998765544


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+..+.....+..+            +||..++..||.+.+++.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         220 AIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             HHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence            43333333232222            5788888899999888865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.72  E-value=3.1e-18  Score=167.80  Aligned_cols=169  Identities=34%  Similarity=0.564  Sum_probs=112.7

Q ss_pred             CCCCcHHHHHHhcC----CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEE
Q psy17476          1 MRHGSLLNYLRRHE----NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVV   76 (513)
Q Consensus         1 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~   76 (513)
                      +++|+|.+++.+..    ....+++..+..++.|++.||+|||+++++||||||+||+++.++.      +.....++  
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~------~~~~~~~l--  152 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGY------DADRVVKI--  152 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCC------CCCcceEE--
Confidence            46899999998742    1223688899999999999999999999999999999966655431      01112344  


Q ss_pred             EeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecC
Q psy17476         77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT  156 (513)
Q Consensus        77 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  156 (513)
                                .||++++...                                                 .++...     
T Consensus       153 ----------~dfg~~~~~~-------------------------------------------------~~~~~~-----  168 (269)
T cd05044         153 ----------GDFGLARDIY-------------------------------------------------KSDYYR-----  168 (269)
T ss_pred             ----------CCcccccccc-------------------------------------------------cccccc-----
Confidence                      6777654100                                                 000000     


Q ss_pred             CccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCC
Q psy17476        157 QEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRL  236 (513)
Q Consensus       157 ~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~  236 (513)
                           ......++..|+                          +||++....++.++|+|||||++|||++.|..||...
T Consensus       169 -----~~~~~~~~~~y~--------------------------aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~  217 (269)
T cd05044         169 -----KEGEGLLPVRWM--------------------------APESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPAL  217 (269)
T ss_pred             -----cCcccCCCcccc--------------------------CHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCccc
Confidence                 000001223344                          4555555677999999999999999998799999877


Q ss_pred             CcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        237 KNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       237 ~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      ++.+....+..+.+...+            +||...+..||++.+++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         218 NNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             CHHHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            766666655544333322            578888888888888764

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.72  E-value=1.8e-18  Score=179.26  Aligned_cols=54  Identities=20%  Similarity=0.242  Sum_probs=46.5

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +|+|..++.+..   .+++..++.++.||+.||+|||+++||||||||+|||++.++
T Consensus       166 ~~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~  219 (391)
T PHA03212        166 KTDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG  219 (391)
T ss_pred             CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCC
Confidence            478999987754   358889999999999999999999999999999996665544

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.72  E-value=3.5e-18  Score=167.37  Aligned_cols=161  Identities=20%  Similarity=0.323  Sum_probs=109.2

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      ++|+|.+++.+..   .+++..++.++.|++.||+|||+++|+||||||+||+++.+           ...++       
T Consensus        89 ~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~-----------~~~~l-------  147 (266)
T cd06651          89 PGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSA-----------GNVKL-------  147 (266)
T ss_pred             CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC-----------CCEEE-------
Confidence            5789999998754   35788999999999999999999999999999999554433           33455       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .||++++....    .                                         ....          .   
T Consensus       148 -----~dfg~~~~~~~----~-----------------------------------------~~~~----------~---  164 (266)
T cd06651         148 -----GDFGASKRLQT----I-----------------------------------------CMSG----------T---  164 (266)
T ss_pred             -----ccCCCcccccc----c-----------------------------------------cccC----------C---
Confidence                 77877651000    0                                         0000          0   


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      ......++.+|                          ++||++....++.++|+||+||++||+++ |..||......+.
T Consensus       165 ~~~~~~~~~~y--------------------------~aPE~~~~~~~~~~~Dv~slG~i~~el~~-g~~pf~~~~~~~~  217 (266)
T cd06651         165 GIRSVTGTPYW--------------------------MSPEVISGEGYGRKADVWSLGCTVVEMLT-EKPPWAEYEAMAA  217 (266)
T ss_pred             ccccCCccccc--------------------------cCHHHhCCCCCCchhhhHHHHHHHHHHHH-CCCCccccchHHH
Confidence            00001133334                          45555555678899999999999999999 9999976654333


Q ss_pred             ccccc-cccccCCC-----------CCcCCCCCCHHHHHHHHcC
Q psy17476        242 VDRVQ-RGIILEKP-----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       242 ~~~i~-~~~~~~~p-----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ...+. ....+..|           .||..++..|+.+++++.+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         218 IFKIATQPTNPQLPSHISEHARDFLGCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             HHHHhcCCCCCCCchhcCHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            32222 22222111           4788899999999999876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0690|consensus

Probab=99.71  E-value=1.3e-18  Score=165.58  Aligned_cols=133  Identities=19%  Similarity=0.299  Sum_probs=106.1

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .||.|+-+|.+.+   .+++++++.+-.+|++||.|||+++||+||||.+|++++.||           .-||       
T Consensus       251 nGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDG-----------HIKi-------  309 (516)
T KOG0690|consen  251 NGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDG-----------HIKI-------  309 (516)
T ss_pred             cCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCC-----------ceEe-------
Confidence            5899999998865   468999999999999999999999999999999995555555           3466       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .||||++.+.                                                +-|+             
T Consensus       310 -----tDFGLCKE~I------------------------------------------------~~g~-------------  323 (516)
T KOG0690|consen  310 -----TDFGLCKEEI------------------------------------------------KYGD-------------  323 (516)
T ss_pred             -----eecccchhcc------------------------------------------------cccc-------------
Confidence                 9999998321                                                1111             


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      +.+..+|++.|.+||.+                          ....|+.++|+|.+|+++|||+- |+.||-..++..+
T Consensus       324 t~kTFCGTPEYLAPEVl--------------------------eDnDYgraVDWWG~GVVMYEMmC-GRLPFyn~dh~kL  376 (516)
T KOG0690|consen  324 TTKTFCGTPEYLAPEVL--------------------------EDNDYGRAVDWWGVGVVMYEMMC-GRLPFYNKDHEKL  376 (516)
T ss_pred             eeccccCChhhcCchhh--------------------------ccccccceeehhhhhHHHHHHHh-ccCcccccchhHH
Confidence            22456677777666655                          44578999999999999999995 9999999999998


Q ss_pred             ccccccc
Q psy17476        242 VDRVQRG  248 (513)
Q Consensus       242 ~~~i~~~  248 (513)
                      .+.|..+
T Consensus       377 FeLIl~e  383 (516)
T KOG0690|consen  377 FELILME  383 (516)
T ss_pred             HHHHHhh
Confidence            8888543

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.71  E-value=2.3e-18  Score=176.46  Aligned_cols=54  Identities=22%  Similarity=0.277  Sum_probs=46.7

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      .|+|.+++.+...  ++++..++.++.||+.||.|||+++||||||||+|||++.+
T Consensus       140 ~~~l~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~  193 (357)
T PHA03209        140 SSDLYTYLTKRSR--PLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDV  193 (357)
T ss_pred             CCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence            5789999987554  36888999999999999999999999999999999655544

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=3.8e-18  Score=166.48  Aligned_cols=162  Identities=19%  Similarity=0.311  Sum_probs=109.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||+|||+.+|+||||||+||+++.++           ..++      
T Consensus        86 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~-----------~~~l------  145 (263)
T cd06625          86 MPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAG-----------NVKL------  145 (263)
T ss_pred             CCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-----------CEEE------
Confidence            46899999998765   358889999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....    .                                                   .....  
T Consensus       146 ------~dfg~~~~~~~----~---------------------------------------------------~~~~~--  162 (263)
T cd06625         146 ------GDFGASKRLQT----I---------------------------------------------------CSSGT--  162 (263)
T ss_pred             ------eecccceeccc----c---------------------------------------------------ccccc--
Confidence                  67776541000    0                                                   00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..|+|||++                          ....++.++|+||+|+++||+++ |+.||......+
T Consensus       163 -~~~~~~~~~~y~aPE~~--------------------------~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~  214 (263)
T cd06625         163 -GMKSVTGTPYWMSPEVI--------------------------SGEGYGRKADVWSVGCTVVEMLT-EKPPWAEFEAMA  214 (263)
T ss_pred             -cccCCCcCccccCccee--------------------------ccCCCCchhhhHHHHHHHHHHHh-CCCCccccchHH
Confidence             00011234455555554                          44457899999999999999999 999997655543


Q ss_pred             eccccc-cccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQ-RGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~-~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+. .......|            .||..++..||++.+++.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         215 AIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             HHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            332222 22222222            5788888889988888865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.71  E-value=6e-18  Score=166.12  Aligned_cols=165  Identities=28%  Similarity=0.494  Sum_probs=112.4

Q ss_pred             CCCCcHHHHHHhcC---CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEE
Q psy17476          1 MRHGSLLNYLRRHE---NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVA   77 (513)
Q Consensus         1 ~~~g~L~~~l~~~~---~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~   77 (513)
                      +++|+|.+++....   +...+++..++.++.|++.||+|||+++|+||||||+||+++.+.           ..++   
T Consensus        89 ~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~-----------~~kl---  154 (273)
T cd05074          89 MKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENM-----------TVCV---  154 (273)
T ss_pred             CCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCC-----------CEEE---
Confidence            35789999886421   222468889999999999999999999999999999996654432           2344   


Q ss_pred             eccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCC
Q psy17476         78 LYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ  157 (513)
Q Consensus        78 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  157 (513)
                               .|||+++...                                                 .+...       
T Consensus       155 ---------~dfg~~~~~~-------------------------------------------------~~~~~-------  169 (273)
T cd05074         155 ---------ADFGLSKKIY-------------------------------------------------SGDYY-------  169 (273)
T ss_pred             ---------Cccccccccc-------------------------------------------------CCcce-------
Confidence                     6777665100                                                 00000       


Q ss_pred             ccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC
Q psy17476        158 EHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK  237 (513)
Q Consensus       158 ~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~  237 (513)
                              ..+....                     ..+.+++||++....++.++|+|||||++|||++.|..||...+
T Consensus       170 --------~~~~~~~---------------------~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~  220 (273)
T cd05074         170 --------RQGCASK---------------------LPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE  220 (273)
T ss_pred             --------ecCCCcc---------------------CchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC
Confidence                    0000000                     11234566777777889999999999999999987899998777


Q ss_pred             cceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 NTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..++...+..+..+..+            +||...+..||++.+++..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         221 NSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            66665555444333222            5788888889988887753

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.71  E-value=2.6e-18  Score=174.98  Aligned_cols=53  Identities=19%  Similarity=0.200  Sum_probs=44.9

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|.++++..    .+++..++.++.|++.||+|||+++|+||||||+||+++.++
T Consensus       103 ~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~  155 (343)
T cd07878         103 GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC  155 (343)
T ss_pred             CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCC
Confidence            67888877643    368899999999999999999999999999999996655543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.71  E-value=4.2e-18  Score=170.35  Aligned_cols=164  Identities=26%  Similarity=0.449  Sum_probs=110.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++++.... .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       121 ~~~~~L~~~i~~~~~~-~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~-----------~~~l------  182 (302)
T cd05055         121 CCYGDLLNFLRRKRES-FLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK-----------IVKI------  182 (302)
T ss_pred             CCCCcHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCC-----------eEEE------
Confidence            4689999999875533 368899999999999999999999999999999996554432           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                 ...          ..
T Consensus       183 ------~dfg~~~~~~-------------------------------------------------~~~----------~~  197 (302)
T cd05055         183 ------CDFGLARDIM-------------------------------------------------NDS----------NY  197 (302)
T ss_pred             ------CCCccccccc-------------------------------------------------CCC----------ce
Confidence                  7777765100                                                 000          00


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......++.                          .+++||++....++.++|+||+||++|||++.|..||...+..+
T Consensus       198 ~~~~~~~~~~--------------------------~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~  251 (302)
T cd05055         198 VVKGNARLPV--------------------------KWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS  251 (302)
T ss_pred             eecCCCCccc--------------------------ccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH
Confidence            0000001122                          34556666666789999999999999999977899997665433


Q ss_pred             e-ccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 V-VDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~-~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      . ...+..+.+...+            +||...+..||++.+++..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~  297 (302)
T cd05055         252 KFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL  297 (302)
T ss_pred             HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            2 2333333332221            5788888889988888753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0612|consensus

Probab=99.71  E-value=3e-18  Score=185.66  Aligned_cols=164  Identities=18%  Similarity=0.256  Sum_probs=116.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ||||||..+|.+.+   .++++.+++|+.+|+.||+-||+.|+|||||||.|||++.+|+  |         |+      
T Consensus       157 ~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GH--i---------kL------  216 (1317)
T KOG0612|consen  157 MPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGH--I---------KL------  216 (1317)
T ss_pred             ccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCc--E---------ee------
Confidence            79999999999987   3699999999999999999999999999999999988888775  2         22      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||-+-    ....   +|                                                     -
T Consensus       217 ------ADFGsCl----km~~---dG-----------------------------------------------------~  230 (1317)
T KOG0612|consen  217 ------ADFGSCL----KMDA---DG-----------------------------------------------------T  230 (1317)
T ss_pred             ------ccchhHH----hcCC---CC-----------------------------------------------------c
Confidence                  5554331    0000   00                                                     0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......||+.|++||+++..+.                     ....|+..+|+||+||++|||+. |..||-..+.-+
T Consensus       231 V~s~~aVGTPDYISPEvLqs~~~---------------------~~g~yG~ecDwWSlGV~~YEMly-G~TPFYadslve  288 (1317)
T KOG0612|consen  231 VRSSVAVGTPDYISPEVLQSQGD---------------------GKGEYGRECDWWSLGVFMYEMLY-GETPFYADSLVE  288 (1317)
T ss_pred             EEeccccCCCCccCHHHHHhhcC---------------------CccccCCccchhhhHHHHHHHHc-CCCcchHHHHHH
Confidence            01122359999999998876542                     12578999999999999999997 999998877777


Q ss_pred             eccccc-cccccCCCCCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQ-RGIILEKPKAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~-~~~~~~~p~~w~~~~~~R~~aeeLL~  272 (513)
                      ++.+|. +...+..|..-......+.-.+.++.
T Consensus       289 TY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~  321 (1317)
T KOG0612|consen  289 TYGKIMNHKESLSFPDETDVSEEAKDLIEALLC  321 (1317)
T ss_pred             HHHHHhchhhhcCCCcccccCHHHHHHHHHHhc
Confidence            777774 34445445322232233333444443

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.71  E-value=3.8e-18  Score=166.94  Aligned_cols=162  Identities=15%  Similarity=0.224  Sum_probs=110.6

Q ss_pred             CCCCcHHHHHHhcCC-CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHEN-TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.+++..... ...+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++     
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~-----------~~~l-----  147 (267)
T cd08228          84 ADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATG-----------VVKL-----  147 (267)
T ss_pred             cCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCC-----------CEEE-----
Confidence            367899999875322 22368889999999999999999999999999999996655543           2344     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .||+++....                                                          .... 
T Consensus       148 -------~d~g~~~~~~----------------------------------------------------------~~~~-  161 (267)
T cd08228         148 -------GDLGLGRFFS----------------------------------------------------------SKTT-  161 (267)
T ss_pred             -------Cccccceecc----------------------------------------------------------chhH-
Confidence                   6777654100                                                          0000 


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC--
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK--  237 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~--  237 (513)
                        ....                          ..+.+.+++||++....++.++|+||+|+++|||++ |..||....  
T Consensus       162 --~~~~--------------------------~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~p~~~~~~~  212 (267)
T cd08228         162 --AAHS--------------------------LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA-LQSPFYGDKMN  212 (267)
T ss_pred             --HHhc--------------------------CCCCccccChhhhccCCCCchhhHHHHHHHHHHHhc-CCCCCcccccc
Confidence              0000                          112334556666666678899999999999999999 999986443  


Q ss_pred             cceeccccccccccCCC-------------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 NTEVVDRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ~~~~~~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..++...+.....++.+             +||..++..||++.+++..
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         213 LFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             HHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence            23444444443333322             5899999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.71  E-value=4.6e-18  Score=166.47  Aligned_cols=162  Identities=18%  Similarity=0.190  Sum_probs=107.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++++..   ++++..+..++.|++.||+|||+++|+||||||+||+++.+           ...++      
T Consensus        88 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~-----------~~~~l------  147 (267)
T cd06646          88 CGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDN-----------GDVKL------  147 (267)
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC-----------CCEEE------
Confidence            46899999998654   46888999999999999999999999999999999555443           23445      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...-                                                         ...   
T Consensus       148 ------~dfg~~~~~~~---------------------------------------------------------~~~---  161 (267)
T cd06646         148 ------ADFGVAAKITA---------------------------------------------------------TIA---  161 (267)
T ss_pred             ------CcCccceeecc---------------------------------------------------------ccc---
Confidence                  78877651000                                                         000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|||.+...                       ....++.++|+||+||++|||++ |..||...++.+
T Consensus       162 -~~~~~~~~~~y~~PE~~~~~-----------------------~~~~~~~~~Dvws~G~il~el~~-g~~p~~~~~~~~  216 (267)
T cd06646         162 -KRKSFIGTPYWMAPEVAAVE-----------------------KNGGYNQLCDIWAVGITAIELAE-LQPPMFDLHPMR  216 (267)
T ss_pred             -ccCccccCccccCHhHcccc-----------------------cCCCCcchhhHHHHHHHHHHHHh-CCCCccccchhh
Confidence             00011245566666654321                       12346789999999999999999 999986555433


Q ss_pred             eccccccc-cccCCC---------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRG-IILEKP---------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~-~~~~~p---------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+... ..++..               +||..++..||+++++|.+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         217 ALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             hheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence            32222211 111110               4577788888888887764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=3.8e-18  Score=168.32  Aligned_cols=165  Identities=19%  Similarity=0.281  Sum_probs=113.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+...  ++++..++.++.|++.||.|||+++|+||||||+||+++.++           ..++      
T Consensus        84 ~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~-----------~~~l------  144 (280)
T cd06611          84 CDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG-----------DVKL------  144 (280)
T ss_pred             cCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCC-----------CEEE------
Confidence            468999999988654  368889999999999999999999999999999996665543           2334      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....-                                                          ...  
T Consensus       145 ------~d~g~~~~~~~----------------------------------------------------------~~~--  158 (280)
T cd06611         145 ------ADFGVSAKNKS----------------------------------------------------------TLQ--  158 (280)
T ss_pred             ------ccCccchhhcc----------------------------------------------------------ccc--
Confidence                  66665531000                                                          000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..|++||.+....                     .....++.++|+||+||++|||++ |..||...+..+
T Consensus       159 -~~~~~~~~~~y~~PE~~~~~~---------------------~~~~~~~~~sDi~slG~il~~l~~-g~~p~~~~~~~~  215 (280)
T cd06611         159 -KRDTFIGTPYWMAPEVVACET---------------------FKDNPYDYKADIWSLGITLIELAQ-MEPPHHELNPMR  215 (280)
T ss_pred             -ccceeecchhhcCHHHHhhcc---------------------cCCCCCCccccHHHHHHHHHHHHh-CCCCcccCCHHH
Confidence             000112555666666543211                     122356889999999999999999 999998776655


Q ss_pred             eccccccccccCC--C------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK--P------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~--p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+..+..+..  +            .||..++..|+++++++.+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         216 VLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             HHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            5544444332211  1            4788889999999998876

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.71  E-value=7.4e-18  Score=167.48  Aligned_cols=165  Identities=18%  Similarity=0.247  Sum_probs=112.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|..++.+...  ++++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        91 ~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~-----------~~kl------  151 (292)
T cd06644          91 CPGGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG-----------DIKL------  151 (292)
T ss_pred             CCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC-----------CEEE------
Confidence            368899998877554  368899999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                         .....  
T Consensus       152 ------~dfg~~~~~~---------------------------------------------------------~~~~~--  166 (292)
T cd06644         152 ------ADFGVSAKNV---------------------------------------------------------KTLQR--  166 (292)
T ss_pred             ------ccCccceecc---------------------------------------------------------ccccc--
Confidence                  6776654100                                                         00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        .....++..|++||++....                     .....++.++|+|||||++|||++ |..||...+..+
T Consensus       167 --~~~~~~~~~y~aPE~~~~~~---------------------~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~  222 (292)
T cd06644         167 --RDSFIGTPYWMAPEVVMCET---------------------MKDTPYDYKADIWSLGITLIEMAQ-IEPPHHELNPMR  222 (292)
T ss_pred             --cceecCCccccCceeecccc---------------------ccCCCCCchhhhHhHHHHHHHHhc-CCCCCccccHHH
Confidence              00112566788888764321                     122356889999999999999999 999997665444


Q ss_pred             eccccccccccC--C------------CCCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILE--K------------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~--~------------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.+...+.  .            .+||..++..||.+++++.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         223 VLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             HHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            333333222211  1            15788899999999999875

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.71  E-value=4.1e-18  Score=172.97  Aligned_cols=56  Identities=29%  Similarity=0.351  Sum_probs=47.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhc-ceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERH-NYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~-~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus        85 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~  141 (333)
T cd06650          85 MDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG  141 (333)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC
Confidence            46899999998765   358889999999999999999985 799999999996655443

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0603|consensus

Probab=99.71  E-value=2.2e-18  Score=177.87  Aligned_cols=130  Identities=18%  Similarity=0.286  Sum_probs=90.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCccccccc-CccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSS-LNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~-~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      |.||-|.+-+......    ...+..|++|++.|+.|||++|+|||||||+|||+. ..+           ..++     
T Consensus       398 l~g~ell~ri~~~~~~----~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g-----------~lrl-----  457 (612)
T KOG0603|consen  398 LDGGELLRRIRSKPEF----CSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAG-----------HLRL-----  457 (612)
T ss_pred             ccccHHHHHHHhcchh----HHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCC-----------cEEE-----
Confidence            3566677766665432    267888999999999999999999999999996552 332           2233     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||.++..+-                                                              
T Consensus       458 -------tyFG~a~~~~~--------------------------------------------------------------  468 (612)
T KOG0603|consen  458 -------TYFGFWSELER--------------------------------------------------------------  468 (612)
T ss_pred             -------EEechhhhCch--------------------------------------------------------------
Confidence                   66766652100                                                              


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                                 .++.|-+                 +..++|||++....|+.++|+||||+++|+|++ |..||...+..
T Consensus       469 -----------~~~tp~~-----------------t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~-G~tp~~~~P~~  519 (612)
T KOG0603|consen  469 -----------SCDTPAL-----------------TLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLT-GRTLFAAHPAG  519 (612)
T ss_pred             -----------hhcccch-----------------hhcccChhhhccCCCCcchhhHHHHHHHHHHHh-CCCccccCCch
Confidence                       0111111                 123455666666789999999999999999999 99999877765


Q ss_pred             -eeccccccc
Q psy17476        240 -EVVDRVQRG  248 (513)
Q Consensus       240 -~~~~~i~~~  248 (513)
                       ++..+|..+
T Consensus       520 ~ei~~~i~~~  529 (612)
T KOG0603|consen  520 IEIHTRIQMP  529 (612)
T ss_pred             HHHHHhhcCC
Confidence             666666544

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.71  E-value=4.4e-18  Score=168.27  Aligned_cols=54  Identities=37%  Similarity=0.599  Sum_probs=47.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++.++.    +++..++.++.|++.||+|||+++|+||||||+||+++.+
T Consensus        90 ~~~~~l~~~~~~~~----l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~  143 (283)
T cd05080          90 VPLGSLRDYLPKHK----LNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDND  143 (283)
T ss_pred             CCCCCHHHHHHHcC----CCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCC
Confidence            36899999998753    6889999999999999999999999999999999665544

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.71  E-value=5.2e-18  Score=164.88  Aligned_cols=161  Identities=19%  Similarity=0.273  Sum_probs=113.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.... .+++..+..++.|++.||+|||+.+++||||||+||+++.++           ..++      
T Consensus        81 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~-----------~~kl------  142 (256)
T cd08221          81 ANGGTLYDKIVRQKGQ-LFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG-----------LIKL------  142 (256)
T ss_pred             cCCCcHHHHHHhcccc-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCC-----------CEEE------
Confidence            4689999999886432 468889999999999999999999999999999996554443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++....                                                          ...  
T Consensus       143 ------~d~~~~~~~~~----------------------------------------------------------~~~--  156 (256)
T cd08221         143 ------GDFGISKILGS----------------------------------------------------------EYS--  156 (256)
T ss_pred             ------CcCcceEEccc----------------------------------------------------------ccc--
Confidence                  67776541000                                                          000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..|.                          +||++....++.++|+||+|+++|||++ |..||......+
T Consensus       157 -~~~~~~~~~~y~--------------------------ape~~~~~~~~~~~Dv~slG~i~~~l~~-g~~~~~~~~~~~  208 (256)
T cd08221         157 -MAETVVGTPYYM--------------------------SPELCQGVKYNFKSDIWALGCVLYELLT-LKRTFDATNPLN  208 (256)
T ss_pred             -cccccCCCcccc--------------------------CHhhcCCCCCCCcchhHHHHHHHHHHHH-CCCCCCCCCHHH
Confidence             000111333444                          4555555567889999999999999999 999998777666


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+..+...+.+            .||..++..|++++++|..
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         209 LVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             HHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            66665544333322            4787888889999888865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.71  E-value=6.2e-18  Score=163.75  Aligned_cols=161  Identities=29%  Similarity=0.562  Sum_probs=112.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..+..++.|++.||.|||+++++||||||+||+++.++           ..++      
T Consensus        74 ~~~~~L~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~-----------~~~l------  134 (250)
T cd05085          74 VPGGDFLSFLRKKKDE--LKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENN-----------VLKI------  134 (250)
T ss_pred             CCCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCC-----------eEEE------
Confidence            3689999999876543  58889999999999999999999999999999996655443           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                 .+            .
T Consensus       135 ------~d~g~~~~~~-------------------------------------------------~~------------~  147 (250)
T cd05085         135 ------SDFGMSRQED-------------------------------------------------DG------------I  147 (250)
T ss_pred             ------CCCccceecc-------------------------------------------------cc------------c
Confidence                  6777654100                                                 00            0


Q ss_pred             eee-ecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKV-KDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~-~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                      ... ....++.                          .+++||++....++.++|+||||+++||+++.|..||......
T Consensus       148 ~~~~~~~~~~~--------------------------~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~  201 (250)
T cd05085         148 YSSSGLKQIPI--------------------------KWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ  201 (250)
T ss_pred             cccCCCCCCcc--------------------------cccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH
Confidence            000 0000112                          2455666666678899999999999999998799999877766


Q ss_pred             eeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+...+..+.+...+            +||...+..|+++.+++..
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  247 (250)
T cd05085         202 QAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE  247 (250)
T ss_pred             HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            666666555444322            5788888888888877653

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.71  E-value=2.8e-18  Score=176.80  Aligned_cols=54  Identities=17%  Similarity=0.203  Sum_probs=45.4

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|.+++....   .+++..++.++.||+.||+|||+++|+||||||+|||++.++
T Consensus        87 ~~~l~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~  140 (372)
T cd07853          87 QSDLHKIIVSPQ---PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC  140 (372)
T ss_pred             ccCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCC
Confidence            467888876654   468899999999999999999999999999999996655543

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.71  E-value=7e-18  Score=165.17  Aligned_cols=56  Identities=18%  Similarity=0.166  Sum_probs=48.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++....   .+++..++.++.|++.||+|||++||+||||||+||+++.++
T Consensus        88 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~  143 (267)
T cd06645          88 CGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNG  143 (267)
T ss_pred             cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            36789999998765   468999999999999999999999999999999996655443

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.71  E-value=4e-18  Score=169.66  Aligned_cols=158  Identities=18%  Similarity=0.354  Sum_probs=108.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.    .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       101 ~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~-----------~~kL------  159 (292)
T cd06658         101 LEGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG-----------RIKL------  159 (292)
T ss_pred             CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC-----------CEEE------
Confidence            4688999988653    257889999999999999999999999999999996554443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                         .....  
T Consensus       160 ------~dfg~~~~~~---------------------------------------------------------~~~~~--  174 (292)
T cd06658         160 ------SDFGFCAQVS---------------------------------------------------------KEVPK--  174 (292)
T ss_pred             ------ccCcchhhcc---------------------------------------------------------ccccc--
Confidence                  7777764100                                                         00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        .....|+..|                          ++||++....++.++|+||||+++||+++ |..||...+..+
T Consensus       175 --~~~~~~~~~y--------------------------~aPE~~~~~~~~~~~Dv~slGvil~el~~-g~~p~~~~~~~~  225 (292)
T cd06658         175 --RKSLVGTPYW--------------------------MAPEVISRLPYGTEVDIWSLGIMVIEMID-GEPPYFNEPPLQ  225 (292)
T ss_pred             --CceeecCccc--------------------------cCHHHHccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence              0001133334                          45555555677899999999999999999 999998766544


Q ss_pred             eccccccccccCC--------------CCCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK--------------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~--------------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+........              ..+|..++..|+++++++.+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         226 AMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            4433332211111              14788889999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.71  E-value=3e-18  Score=175.42  Aligned_cols=52  Identities=17%  Similarity=0.119  Sum_probs=42.8

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++..     .+++..+..++.|+++||+|||++||+||||||+|||++.++
T Consensus       105 ~~~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~  156 (355)
T cd07874         105 DANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  156 (355)
T ss_pred             cccHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCC
Confidence            3567776654     257889999999999999999999999999999996665543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.71  E-value=5.7e-18  Score=167.88  Aligned_cols=164  Identities=29%  Similarity=0.459  Sum_probs=113.9

Q ss_pred             CCCCcHHHHHHhcCC-------------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcccc
Q psy17476          1 MRHGSLLNYLRRHEN-------------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEIS   61 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~   61 (513)
                      +++|+|.+++.....                   ...+++..++.++.|++.||+|||+++++||||||+||+++.++  
T Consensus        90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~--  167 (288)
T cd05050          90 MAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENM--  167 (288)
T ss_pred             CCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCC--
Confidence            367999999986421                   12367888999999999999999999999999999996655443  


Q ss_pred             ccccCCccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCC
Q psy17476         62 FILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGD  141 (513)
Q Consensus        62 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (513)
                               ..++            .|||+++...                                             
T Consensus       168 ---------~~~l------------~dfg~~~~~~---------------------------------------------  181 (288)
T cd05050         168 ---------VVKI------------ADFGLSRNIY---------------------------------------------  181 (288)
T ss_pred             ---------ceEE------------Cccccceecc---------------------------------------------
Confidence                     3344            7777654100                                             


Q ss_pred             CCCCCCCEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceee
Q psy17476        142 LSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVL  221 (513)
Q Consensus       142 l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~  221 (513)
                                                ....+.....    .          .....+++||++....++.++|+|||||+
T Consensus       182 --------------------------~~~~~~~~~~----~----------~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  221 (288)
T cd05050         182 --------------------------SADYYKASEN----D----------AIPIRWMPPESIFYNRYTTESDVWAYGVV  221 (288)
T ss_pred             --------------------------cCccccccCC----C----------ccChhhcCHHHHhcCCCCchhHHHHHHHH
Confidence                                      0000000000    0          00113566777777789999999999999


Q ss_pred             eeeeeecCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        222 MWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       222 l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +|||++.|..||...+..++...+..+...+.+            +||..++..||++.+++.
T Consensus       222 l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         222 LWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            999998688899877777776666555443322            478888888898888764

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.71  E-value=3.2e-18  Score=175.88  Aligned_cols=125  Identities=16%  Similarity=0.180  Sum_probs=88.8

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .|+|.+++..     .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++        
T Consensus       112 ~~~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-----------~~kL--------  167 (364)
T cd07875         112 DANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-----------TLKI--------  167 (364)
T ss_pred             CCCHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCC-----------cEEE--------
Confidence            3577777754     257889999999999999999999999999999996655443           3344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++...                                                   .       . .   .
T Consensus       168 ----~DfG~a~~~~---------------------------------------------------~-------~-~---~  181 (364)
T cd07875         168 ----LDFGLARTAG---------------------------------------------------T-------S-F---M  181 (364)
T ss_pred             ----EeCCCccccC---------------------------------------------------C-------C-C---c
Confidence                7787765100                                                   0       0 0   0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .....|                          ++.++|||++....++.++|+|||||++|||++ |+.||...+..+..
T Consensus       182 ~~~~~~--------------------------t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~  234 (364)
T cd07875         182 MTPYVV--------------------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPGTDHIDQW  234 (364)
T ss_pred             ccCCcc--------------------------cCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Confidence            000112                          334556666777788999999999999999999 99999876654443


Q ss_pred             cc
Q psy17476        243 DR  244 (513)
Q Consensus       243 ~~  244 (513)
                      ..
T Consensus       235 ~~  236 (364)
T cd07875         235 NK  236 (364)
T ss_pred             HH
Confidence            33

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.70  E-value=3.8e-18  Score=177.09  Aligned_cols=54  Identities=20%  Similarity=0.263  Sum_probs=45.9

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +|+|.+++.+..   .+++..++.++.|++.||+|||+++||||||||+|||++.++
T Consensus       169 ~~~l~~~l~~~~---~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~  222 (392)
T PHA03207        169 KCDLFTYVDRSG---PLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE  222 (392)
T ss_pred             CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC
Confidence            578999995443   468899999999999999999999999999999996655543

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.70  E-value=5.2e-18  Score=168.33  Aligned_cols=165  Identities=25%  Similarity=0.447  Sum_probs=111.9

Q ss_pred             CCCCcHHHHHHhcCC-------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCc
Q psy17476          1 MRHGSLLNYLRRHEN-------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPK   73 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~   73 (513)
                      +++|+|.+++++...       ....+...+..++.|++.||.|||+++|+||||||+||+++.++           ..+
T Consensus        91 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~-----------~~~  159 (288)
T cd05061          91 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF-----------TVK  159 (288)
T ss_pred             CCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCC-----------cEE
Confidence            468999999987431       12345668899999999999999999999999999996655443           334


Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEe
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVM  153 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  153 (513)
                      +            .|||+++...                                                 ..+.    
T Consensus       160 L------------~Dfg~~~~~~-------------------------------------------------~~~~----  174 (288)
T cd05061         160 I------------GDFGMTRDIY-------------------------------------------------ETDY----  174 (288)
T ss_pred             E------------CcCCcccccc-------------------------------------------------cccc----
Confidence            4            7777765100                                                 0000    


Q ss_pred             ecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCC
Q psy17476        154 DDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPY  233 (513)
Q Consensus       154 ~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf  233 (513)
                          . . ......++..|                          ++||++....++.++|+|||||++|||++.|..||
T Consensus       175 ----~-~-~~~~~~~~~~y--------------------------~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~  222 (288)
T cd05061         175 ----Y-R-KGGKGLLPVRW--------------------------MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY  222 (288)
T ss_pred             ----c-c-ccCCCcccccc--------------------------cCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCC
Confidence                0 0 00000112223                          45555666678999999999999999998788999


Q ss_pred             CCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        234 GRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ......++...+..+...+.+            .||..++..||++.+++..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  274 (288)
T cd05061         223 QGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNL  274 (288)
T ss_pred             CCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            877776666655444333222            4788888899988888753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG0032|consensus

Probab=99.70  E-value=1.1e-17  Score=170.89  Aligned_cols=145  Identities=21%  Similarity=0.334  Sum_probs=109.7

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccC---CCceEEEe
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMI---RPKVVVAL   78 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~---~~~~~~~~   78 (513)
                      .||+|++.|.+.  .  +++..+..+++|++.++.|||+.||+||||||+|+          |+.+...   ..++    
T Consensus       119 ~GGeLfd~i~~~--~--~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~----------L~~~~~~~~~~ik~----  180 (382)
T KOG0032|consen  119 EGGELFDRIVKK--H--YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENL----------LLASKDEGSGRIKL----  180 (382)
T ss_pred             CCchHHHHHHHc--c--CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHe----------eeccccCCCCcEEE----
Confidence            589999999998  2  58999999999999999999999999999999994          3333321   3344    


Q ss_pred             ccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCc
Q psy17476         79 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE  158 (513)
Q Consensus        79 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  158 (513)
                              .|||++.-                                                 +..++          
T Consensus       181 --------~DFGla~~-------------------------------------------------~~~~~----------  193 (382)
T KOG0032|consen  181 --------IDFGLAKF-------------------------------------------------IKPGE----------  193 (382)
T ss_pred             --------eeCCCceE-------------------------------------------------ccCCc----------
Confidence                    88888761                                                 00011          


Q ss_pred             cceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc
Q psy17476        159 HWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN  238 (513)
Q Consensus       159 ~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~  238 (513)
                         .....+|+.+|++                          ||++.+.+|+..+|+||+|+++|.|+. |.+||.....
T Consensus       194 ---~~~~~~Gtp~y~A--------------------------PEvl~~~~y~~~~DiWS~Gvi~yiLL~-G~~PF~~~~~  243 (382)
T KOG0032|consen  194 ---RLHTIVGTPEYVA--------------------------PEVLGGRPYGDEVDVWSIGVILYILLS-GVPPFWGETE  243 (382)
T ss_pred             ---eEeeecCCccccC--------------------------chhhcCCCCCcccchhHHHHHHHHHhh-CCCCCcCCCh
Confidence               1122345555555                          455566789999999999999999997 9999999998


Q ss_pred             ceeccccccccccCCCCCcCCCC
Q psy17476        239 TEVVDRVQRGIILEKPKAWYVGD  261 (513)
Q Consensus       239 ~~~~~~i~~~~~~~~p~~w~~~~  261 (513)
                      .++...|..+........|..-.
T Consensus       244 ~~~~~~i~~~~~~f~~~~w~~is  266 (382)
T KOG0032|consen  244 FEIFLAILRGDFDFTSEPWDDIS  266 (382)
T ss_pred             hHHHHHHHcCCCCCCCCCccccC
Confidence            88888888877766666675433

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.70  E-value=5e-18  Score=165.10  Aligned_cols=159  Identities=32%  Similarity=0.615  Sum_probs=113.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.... .+++..+..++.|++.||.|||+++|+||||||+||+++.++           ..++      
T Consensus        82 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~-----------~~~l------  143 (256)
T cd05039          82 MAKGSLVDYLRSRGRA-VITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL-----------VAKV------  143 (256)
T ss_pred             cCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCC-----------CEEE------
Confidence            4679999999886543 368999999999999999999999999999999996554443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++....                                                               
T Consensus       144 ------~d~g~~~~~~~---------------------------------------------------------------  154 (256)
T cd05039         144 ------SDFGLAKEASQ---------------------------------------------------------------  154 (256)
T ss_pred             ------ccccccccccc---------------------------------------------------------------
Confidence                  77877652100                                                               


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       .......+.+|.+||+                          +....++.++|+||+|+++||+++.|..||...+..+
T Consensus       155 -~~~~~~~~~~~~ape~--------------------------~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  207 (256)
T cd05039         155 -GQDSGKLPVKWTAPEA--------------------------LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD  207 (256)
T ss_pred             -ccccCCCcccccCchh--------------------------hcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence             0000012234555554                          4444678899999999999999976999998777766


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+...+            +||...+..||++.+++..
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  252 (256)
T cd05039         208 VVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ  252 (256)
T ss_pred             HHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            66666554443222            4777788888888887753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.70  E-value=4.4e-18  Score=174.49  Aligned_cols=52  Identities=17%  Similarity=0.113  Sum_probs=42.7

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +|+|.++++.     .+++..+..++.|++.||+|||+++|+||||||+||+++.++
T Consensus       109 ~~~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~  160 (359)
T cd07876         109 DANLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  160 (359)
T ss_pred             CcCHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence            3567676643     257889999999999999999999999999999996665554

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.70  E-value=8e-18  Score=164.63  Aligned_cols=55  Identities=20%  Similarity=0.247  Sum_probs=47.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+||+++.+
T Consensus        88 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~  142 (265)
T cd06652          88 MPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSV  142 (265)
T ss_pred             cCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCC
Confidence            36899999998764   35788899999999999999999999999999999655444

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.70  E-value=4.4e-18  Score=174.12  Aligned_cols=160  Identities=21%  Similarity=0.333  Sum_probs=104.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.+..       ..++..+..++.||+.||+|||+++|+||||||+|||++.++           ..++      
T Consensus       154 ~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-----------~~kL------  209 (353)
T PLN00034        154 MDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK-----------NVKI------  209 (353)
T ss_pred             CCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC-----------CEEE------
Confidence            3566664321       246778889999999999999999999999999996655543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-..                                                          ....  
T Consensus       210 ------~DfG~~~~~~----------------------------------------------------------~~~~--  223 (353)
T PLN00034        210 ------ADFGVSRILA----------------------------------------------------------QTMD--  223 (353)
T ss_pred             ------cccccceecc----------------------------------------------------------cccc--
Confidence                  7888765100                                                          0000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|++||++.....                     .....+.++|||||||++|||++ |+.||......+
T Consensus       224 -~~~~~~gt~~y~aPE~~~~~~~---------------------~~~~~~~~~DvwslGvil~el~~-g~~pf~~~~~~~  280 (353)
T PLN00034        224 -PCNSSVGTIAYMSPERINTDLN---------------------HGAYDGYAGDIWSLGVSILEFYL-GRFPFGVGRQGD  280 (353)
T ss_pred             -cccccccCccccCccccccccc---------------------cCcCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcc
Confidence             0011237778888887642110                     01123568999999999999999 999997433322


Q ss_pred             ecc---ccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVD---RVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~---~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ...   .+........+            .||..++..|+++.++|.+
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        281 WASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             HHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            211   11111111111            5899999999999999986

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.70  E-value=4.6e-18  Score=165.79  Aligned_cols=162  Identities=33%  Similarity=0.562  Sum_probs=112.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.... .+++..+..++.|++.||.|||+++|+||||||+||+++.++           ..++      
T Consensus        83 ~~~~~L~~~i~~~~~~-~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~-----------~~~l------  144 (261)
T cd05034          83 MSKGSLLDFLKSGEGK-KLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENL-----------VCKI------  144 (261)
T ss_pred             cCCCCHHHHHhccccC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCC-----------CEEE------
Confidence            4689999999886532 368889999999999999999999999999999996655543           2233      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                         +   ...
T Consensus       145 ------~d~g~~~~~~---------------------------------------------------------~---~~~  158 (261)
T cd05034         145 ------ADFGLARLIE---------------------------------------------------------D---DEY  158 (261)
T ss_pred             ------Cccccceecc---------------------------------------------------------c---hhh
Confidence                  6776654100                                                         0   000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......++.                          .+++||.+....++.++|+||+|+++||+++.|+.||......+
T Consensus       159 ~~~~~~~~~~--------------------------~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~  212 (261)
T cd05034         159 TAREGAKFPI--------------------------KWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE  212 (261)
T ss_pred             hhhhccCCCc--------------------------cccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            0000000112                          23456666666788999999999999999987999998877777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      ..+.+..+.+.+.+            +||...+..||++.+++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         213 VLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            77776655444433            467777777877777653

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.70  E-value=1.2e-17  Score=165.23  Aligned_cols=167  Identities=14%  Similarity=0.193  Sum_probs=111.1

Q ss_pred             CCCCcHHHHHHhcC-CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHE-NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.+++.... ....+++..+..++.|++.||.|||+++|+||||||+||+++.++           ..++     
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~-----------~~kl-----  165 (286)
T cd06638         102 CNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEG-----------GVKL-----  165 (286)
T ss_pred             cCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCC-----------CEEE-----
Confidence            46899999987532 122468889999999999999999999999999999996655543           2344     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||++....                                                          .....
T Consensus       166 -------~dfg~~~~~~----------------------------------------------------------~~~~~  180 (286)
T cd06638         166 -------VDFGVSAQLT----------------------------------------------------------STRLR  180 (286)
T ss_pred             -------ccCCceeecc----------------------------------------------------------cCCCc
Confidence                   6777654100                                                          00000


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                         .....|+..|+|||++....                     .....++.++|+||+||++|||++ |..||......
T Consensus       181 ---~~~~~~~~~y~aPE~~~~~~---------------------~~~~~~~~~~Dv~slGvi~~el~~-g~~p~~~~~~~  235 (286)
T cd06638         181 ---RNTSVGTPFWMAPEVIACEQ---------------------QLDSTYDARCDVWSLGITAIELGD-GDPPLADLHPM  235 (286)
T ss_pred             ---cccccCCCcccChhhhchhh---------------------hccccccchhhhhhHHHHHHHHhc-CCCCCCCCchh
Confidence               00112566777777654211                     012357889999999999999999 99999766543


Q ss_pred             eecccccccccc--CC------------CCCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIIL--EK------------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~--~~------------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      +....+.....+  ..            .+||..++..||++.+++.+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         236 RALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             HHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            333222222111  11            15788889999999998865

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.70  E-value=1.2e-17  Score=163.08  Aligned_cols=166  Identities=21%  Similarity=0.316  Sum_probs=109.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+......+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~-----------~~~l------  143 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG-----------SVKI------  143 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC-----------CEEE------
Confidence            46899999998854322468899999999999999999999999999999996555443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++....                                                         .......
T Consensus       144 ------~df~~~~~~~---------------------------------------------------------~~~~~~~  160 (267)
T cd06610         144 ------ADFGVSASLA---------------------------------------------------------DGGDRTR  160 (267)
T ss_pred             ------cccchHHHhc---------------------------------------------------------cCccccc
Confidence                  6777654100                                                         0000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccc-cccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYT-RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                      .......|+..|                          ++||++... .++.++|+|||||++|||++ |+.||...+..
T Consensus       161 ~~~~~~~~~~~y--------------------------~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~-g~~p~~~~~~~  213 (267)
T cd06610         161 KVRKTFVGTPCW--------------------------MAPEVMEQVHGYDFKADIWSFGITAIELAT-GAAPYSKYPPM  213 (267)
T ss_pred             cccccccCChhh--------------------------cChHHHccccCcCcccchHhHhHHHHHHHh-CCCCccccChh
Confidence            000001133344                          445544444 67899999999999999999 99999876655


Q ss_pred             eeccccccccccCC-----------------CCCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEK-----------------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~-----------------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      +....+.+......                 ..||..++..||++++++.+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         214 KVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             hhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            44433322211100                 14677788888888888765

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.70  E-value=7.7e-18  Score=166.45  Aligned_cols=55  Identities=15%  Similarity=0.074  Sum_probs=48.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++.++.   .+++..+..++.|++.||+|||+++|+||||||+||+++.+
T Consensus        79 ~~~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~  133 (279)
T cd05633          79 MNGGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEH  133 (279)
T ss_pred             CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCC
Confidence            57899999998765   36899999999999999999999999999999999655444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.70  E-value=5e-18  Score=176.30  Aligned_cols=147  Identities=24%  Similarity=0.424  Sum_probs=97.5

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccccccCCCCcccccCCeE
Q psy17476         18 GGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEY   97 (513)
Q Consensus        18 ~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   97 (513)
                      ++++..+..++.|++.||+|||+++|+||||||+|||++.++           .+++            .|||+++....
T Consensus       233 ~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~-----------~~kL------------~DfGla~~~~~  289 (400)
T cd05105         233 GLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGK-----------IVKI------------CDFGLARDIMH  289 (400)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCC-----------EEEE------------EeCCcceeccc
Confidence            367788899999999999999999999999999996554442           3344            67777651000


Q ss_pred             EeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCc
Q psy17476         98 EVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNY  177 (513)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~  177 (513)
                          .                                                     ...  -......++..|     
T Consensus       290 ----~-----------------------------------------------------~~~--~~~~~~~~~~~y-----  305 (400)
T cd05105         290 ----D-----------------------------------------------------SNY--VSKGSTFLPVKW-----  305 (400)
T ss_pred             ----c-----------------------------------------------------ccc--cccCCcCCCcce-----
Confidence                0                                                     000  000001122334     


Q ss_pred             eeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc-ceeccccccccccCCC--
Q psy17476        178 VKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TEVVDRVQRGIILEKP--  254 (513)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~-~~~~~~i~~~~~~~~p--  254 (513)
                                           |+||++....++.++|||||||++|||++.|..||..... ..+...+..+.+++.+  
T Consensus       306 ---------------------~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~  364 (400)
T cd05105         306 ---------------------MAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDH  364 (400)
T ss_pred             ---------------------EChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCcc
Confidence                                 4455555567899999999999999999768999976543 2333444444443332  


Q ss_pred             ----------CCcCCCCCCHHHHHHHHc
Q psy17476        255 ----------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       255 ----------~~w~~~~~~R~~aeeLL~  272 (513)
                                .||..++..||++.++..
T Consensus       365 ~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         365 ATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             CCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence                      578888888888777654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.70  E-value=8.2e-18  Score=163.02  Aligned_cols=163  Identities=33%  Similarity=0.610  Sum_probs=113.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++++|.+++.+...  .+++..+..++.|++.||+|||+++++||||||+||+++.++           ..++      
T Consensus        74 ~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~-----------~~~l------  134 (251)
T cd05041          74 VPGGSLLTFLRKKKN--RLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENN-----------VLKI------  134 (251)
T ss_pred             CCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCC-----------cEEE------
Confidence            468999999987544  357889999999999999999999999999999996665543           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++...-                                                 + ......      
T Consensus       135 ------~d~g~~~~~~~-------------------------------------------------~-~~~~~~------  152 (251)
T cd05041         135 ------SDFGMSREEEG-------------------------------------------------G-IYTVSD------  152 (251)
T ss_pred             ------eeccccccccC-------------------------------------------------C-cceecc------
Confidence                  66766541000                                                 0 000000      


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                         ....++..|                          ++||.+....++.++|+||+||++|||+|.|..||.......
T Consensus       153 ---~~~~~~~~y--------------------------~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~  203 (251)
T cd05041         153 ---GLKQIPIKW--------------------------TAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ  203 (251)
T ss_pred             ---ccCcceecc--------------------------CChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH
Confidence               000012223                          445555556789999999999999999987889998877766


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+....+.+.+            +||...+..||.+.+++..
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~  248 (251)
T cd05041         204 TRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE  248 (251)
T ss_pred             HHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            66666554444333            5788888899999888764

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.69  E-value=9.5e-18  Score=163.07  Aligned_cols=161  Identities=20%  Similarity=0.303  Sum_probs=113.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++...... .+++..+..++.|++.||+|||+++++|+||+|+||+++.++           ..++      
T Consensus        81 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~-----------~~~l------  142 (256)
T cd08218          81 CEGGDLYKKINAQRGV-LFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG-----------TIKL------  142 (256)
T ss_pred             CCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC-----------CEEE------
Confidence            4689999999875432 468889999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++....                                                          ....  
T Consensus       143 ------~d~~~~~~~~----------------------------------------------------------~~~~--  156 (256)
T cd08218         143 ------GDFGIARVLN----------------------------------------------------------STVE--  156 (256)
T ss_pred             ------eeccceeecC----------------------------------------------------------cchh--
Confidence                  6776654100                                                          0000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|                          .+.+++||++....++.++|+|||||+++++++ |..||...+..+
T Consensus       157 -~~~~~~~--------------------------~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~-g~~~~~~~~~~~  208 (256)
T cd08218         157 -LARTCIG--------------------------TPYYLSPEICENRPYNNKSDIWALGCVLYEMCT-LKHAFEAGNMKN  208 (256)
T ss_pred             -hhhhccC--------------------------CccccCHHHhCCCCCCCccchhHHHHHHHHHHc-CCCCccCCCHHH
Confidence             0000112                          233455666666677899999999999999999 999998776666


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+..++.+            .||..++..||.+.+++.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         209 LVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             HHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            66555544444333            4788888888888888865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.69  E-value=1.3e-17  Score=163.26  Aligned_cols=161  Identities=16%  Similarity=0.226  Sum_probs=107.8

Q ss_pred             CCCCcHHHHHHhcCC-CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHEN-TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.+++..... ...+++..++.++.|++.||+|||+++++|+||||+||+++.++           ..++     
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~-----------~~~l-----  147 (267)
T cd08229          84 ADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG-----------VVKL-----  147 (267)
T ss_pred             cCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC-----------CEEE-----
Confidence            367899999986322 22468899999999999999999999999999999996655443           2344     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .||+++.....                                                          ... 
T Consensus       148 -------~dfg~~~~~~~----------------------------------------------------------~~~-  161 (267)
T cd08229         148 -------GDLGLGRFFSS----------------------------------------------------------KTT-  161 (267)
T ss_pred             -------Ccchhhhcccc----------------------------------------------------------CCc-
Confidence                   67766541000                                                          000 


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc-
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-  238 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~-  238 (513)
                        ......|+..|                          ++||++....++.++|+||+|+++|||++ |..||..... 
T Consensus       162 --~~~~~~~~~~~--------------------------~ape~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~  212 (267)
T cd08229         162 --AAHSLVGTPYY--------------------------MSPERIHENGYNFKSDIWSLGCLLYEMAA-LQSPFYGDKMN  212 (267)
T ss_pred             --ccccccCCcCc--------------------------cCHHHhcCCCccchhhHHHHHHHHHHHHh-CCCCcccccch
Confidence              00001133334                          45555556677899999999999999999 9999965432 


Q ss_pred             -ceeccccccccccCCC-------------CCcCCCCCCHHHHHHHHc
Q psy17476        239 -TEVVDRVQRGIILEKP-------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       239 -~~~~~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~  272 (513)
                       .+....+.....++.+             +||..++..||++.+++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         213 LYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             HHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence             2333444333222222             478888999999887764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.69  E-value=8.9e-18  Score=168.77  Aligned_cols=54  Identities=17%  Similarity=0.266  Sum_probs=44.0

Q ss_pred             CCcHHHHHHhcC------CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCccccccc
Q psy17476          3 HGSLLNYLRRHE------NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSS   56 (513)
Q Consensus         3 ~g~L~~~l~~~~------~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~   56 (513)
                      +++|.+++..+.      ....+++..++.++.|++.||.|||+++|+||||||+|||+.
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~  142 (317)
T cd07867          83 EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVM  142 (317)
T ss_pred             CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEc
Confidence            468888876432      122468889999999999999999999999999999996653

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=1.2e-17  Score=164.26  Aligned_cols=158  Identities=20%  Similarity=0.265  Sum_probs=111.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++..+    .+++..+..++.|++.||.|||+++++||||+|+||+++.++           ..++      
T Consensus        81 ~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~-----------~~~l------  139 (274)
T cd06609          81 CGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEG-----------DVKL------  139 (274)
T ss_pred             eCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC-----------CEEE------
Confidence            3689999999875    468889999999999999999999999999999996655543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++...-                                                          ...  
T Consensus       140 ------~d~g~~~~~~~----------------------------------------------------------~~~--  153 (274)
T cd06609         140 ------ADFGVSGQLTS----------------------------------------------------------TMS--  153 (274)
T ss_pred             ------cccccceeecc----------------------------------------------------------ccc--
Confidence                  67776641000                                                          000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..|++|                          |++....++.++|+|||||++|+|++ |..||...+..+
T Consensus       154 -~~~~~~~~~~y~~P--------------------------E~~~~~~~~~~sDv~slG~il~~l~t-g~~p~~~~~~~~  205 (274)
T cd06609         154 -KRNTFVGTPFWMAP--------------------------EVIKQSGYDEKADIWSLGITAIELAK-GEPPLSDLHPMR  205 (274)
T ss_pred             -ccccccCCccccCh--------------------------hhhccCCCCchhhHHHHHHHHHHHHh-CCCCcccCchHH
Confidence             00011134445554                          44555567999999999999999999 999998766655


Q ss_pred             eccccccccccCCC-------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.....+..+             +||..++..|+.+++++.+
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         206 VLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             HHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            55544443332211             3688888899999888875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.69  E-value=4.9e-18  Score=170.32  Aligned_cols=54  Identities=20%  Similarity=0.266  Sum_probs=45.7

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      .++|.+++.+....  +++..++.++.|++.||+|||+++|+||||||+||+++.+
T Consensus        87 ~~~l~~~~~~~~~~--~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~  140 (309)
T cd07872          87 DKDLKQYMDDCGNI--MSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINER  140 (309)
T ss_pred             CCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence            36888988876543  5788999999999999999999999999999999655544

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.69  E-value=1.3e-17  Score=161.81  Aligned_cols=160  Identities=19%  Similarity=0.259  Sum_probs=108.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++++|.+++.....  .+++..++.++.|++.||.|||+.+|+||||+|+||+++.++           ..++      
T Consensus        80 ~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~-----------~~~l------  140 (256)
T cd06612          80 CGAGSVSDIMKITNK--TLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEG-----------QAKL------  140 (256)
T ss_pred             CCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCC-----------cEEE------
Confidence            367899999987554  368899999999999999999999999999999996555443           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++.....                                                          ...  
T Consensus       141 ------~dfg~~~~~~~----------------------------------------------------------~~~--  154 (256)
T cd06612         141 ------ADFGVSGQLTD----------------------------------------------------------TMA--  154 (256)
T ss_pred             ------cccccchhccc----------------------------------------------------------Ccc--
Confidence                  77776651000                                                          000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..|                          ++||++....++.++|+||||+++|+|++ |+.||......+
T Consensus       155 -~~~~~~~~~~y--------------------------~~PE~~~~~~~~~~~Di~s~G~il~~l~~-g~~p~~~~~~~~  206 (256)
T cd06612         155 -KRNTVIGTPFW--------------------------MAPEVIQEIGYNNKADIWSLGITAIEMAE-GKPPYSDIHPMR  206 (256)
T ss_pred             -ccccccCCccc--------------------------cCHHHHhcCCCCchhhHHHHHHHHHHHHh-CCCCCCCcchhh
Confidence             00001133344                          44555555677899999999999999999 999997665543


Q ss_pred             ecccccccccc--------------CCCCCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIIL--------------EKPKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~--------------~~p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+......              ....||..++..|+++.++|.+
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~  253 (256)
T cd06612         207 AIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH  253 (256)
T ss_pred             hhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence            33222211110              0115788888899999888865

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.69  E-value=1e-17  Score=170.74  Aligned_cols=147  Identities=25%  Similarity=0.463  Sum_probs=97.9

Q ss_pred             CchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccccccCCCCcccccCCeEE
Q psy17476         19 GNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYE   98 (513)
Q Consensus        19 ~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~   98 (513)
                      +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++            .|||+++...  
T Consensus       176 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~-----------~~kl------------~dfg~~~~~~--  230 (343)
T cd05103         176 LTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENN-----------VVKI------------CDFGLARDIY--  230 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCC-----------cEEE------------Eecccccccc--
Confidence            57778899999999999999999999999999996554432           3444            6777765100  


Q ss_pred             eeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCce
Q psy17476         99 VMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV  178 (513)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~  178 (513)
                                                                             ..  ..........++..|+|    
T Consensus       231 -------------------------------------------------------~~--~~~~~~~~~~~~~~y~a----  249 (343)
T cd05103         231 -------------------------------------------------------KD--PDYVRKGDARLPLKWMA----  249 (343)
T ss_pred             -------------------------------------------------------cC--cchhhcCCCCCCcceEC----
Confidence                                                                   00  00000000012223444    


Q ss_pred             eeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc-eeccccccccccCCC---
Q psy17476        179 KEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT-EVVDRVQRGIILEKP---  254 (513)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~-~~~~~i~~~~~~~~p---  254 (513)
                                            ||++....++.++|+||||+++|||++.|..||...... ++...+..+.+++.|   
T Consensus       250 ----------------------PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (343)
T cd05103         250 ----------------------PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT  307 (343)
T ss_pred             ----------------------cHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCC
Confidence                                  454555578999999999999999997699999765432 333333444433323   


Q ss_pred             ---------CCcCCCCCCHHHHHHHHcC
Q psy17476        255 ---------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       255 ---------~~w~~~~~~R~~aeeLL~~  273 (513)
                               .||..++..||++.+++.+
T Consensus       308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         308 TPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                     4788899999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.69  E-value=1.2e-17  Score=164.00  Aligned_cols=55  Identities=18%  Similarity=0.279  Sum_probs=48.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.++++++.   +++++.+..++.|+++||.|||+.+++||||||+||+++.+
T Consensus        91 ~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~  145 (267)
T PHA03390         91 IKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRA  145 (267)
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCC
Confidence            47899999998875   46899999999999999999999999999999999655544

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.69  E-value=1.5e-17  Score=165.04  Aligned_cols=167  Identities=13%  Similarity=0.169  Sum_probs=110.7

Q ss_pred             CCCCcHHHHHHhcC-CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHE-NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.++++... ....+++..++.++.|++.||+|||+++|+||||||+||+++.++           ..++     
T Consensus       106 ~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~-----------~~kl-----  169 (291)
T cd06639         106 CNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEG-----------GVKL-----  169 (291)
T ss_pred             CCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC-----------CEEE-----
Confidence            46899999987532 111468889999999999999999999999999999996554443           3344     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||++....                                                 .         ... 
T Consensus       170 -------~dfg~~~~~~-------------------------------------------------~---------~~~-  183 (291)
T cd06639         170 -------VDFGVSAQLT-------------------------------------------------S---------TRL-  183 (291)
T ss_pred             -------eecccchhcc-------------------------------------------------c---------ccc-
Confidence                   6777654100                                                 0         000 


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                        ......|+..|+|||.+.....                     ....++.++|+||+||++|||++ |+.||...+..
T Consensus       184 --~~~~~~~~~~y~aPE~~~~~~~---------------------~~~~~~~~~Di~slGvi~~el~~-g~~p~~~~~~~  239 (291)
T cd06639         184 --RRNTSVGTPFWMAPEVIACEQQ---------------------YDYSYDARCDVWSLGITAIELGD-GDPPLFDMHPV  239 (291)
T ss_pred             --cccCccCCccccChhhhcCCCC---------------------cccccCCccchHHHHHHHHHHhh-CCCCCCCCcHH
Confidence              0001125556677766532210                     11246889999999999999999 99999876654


Q ss_pred             eeccccccccccC--------------CCCCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILE--------------KPKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~--------------~p~~w~~~~~~R~~aeeLL~~  273 (513)
                      +....+.+.....              ..+||..++..||++.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         240 KTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             HHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            3333332221110              115788889999999998875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.69  E-value=1.2e-17  Score=161.99  Aligned_cols=162  Identities=32%  Similarity=0.614  Sum_probs=113.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++...... .+++..+..++.|++.||+|||+++++||||||+||+++.++           ..++      
T Consensus        83 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~-----------~~~l------  144 (258)
T smart00219       83 MEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL-----------VVKI------  144 (258)
T ss_pred             cCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCC-----------eEEE------
Confidence            3679999999886532 168999999999999999999999999999999996655543           2233      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++...-                                                 +           ..
T Consensus       145 ------~dfg~~~~~~~-------------------------------------------------~-----------~~  158 (258)
T smart00219      145 ------SDFGLSRDLYD-------------------------------------------------D-----------DY  158 (258)
T ss_pred             ------cccCCceeccc-------------------------------------------------c-----------cc
Confidence                  67776541000                                                 0           00


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......++..|                          ++||.+....++.++|+||+|++++||++.|..||...+..+
T Consensus       159 ~~~~~~~~~~~y--------------------------~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~  212 (258)
T smart00219      159 YKKKGGKLPIRW--------------------------MAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE  212 (258)
T ss_pred             cccccCCCcccc--------------------------cChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            000000022233                          445555556779999999999999999987899998877777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +.+.+.++...+.+            +||..++..||++.+++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      213 VLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             HHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence            77666655554433            467777888888877764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.69  E-value=1.3e-17  Score=165.28  Aligned_cols=158  Identities=18%  Similarity=0.340  Sum_probs=108.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.    .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        98 ~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----------~~~l------  156 (285)
T cd06648          98 LEGGALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDG-----------RVKL------  156 (285)
T ss_pred             cCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCC-----------cEEE------
Confidence            4689999999873    358889999999999999999999999999999996655443           2233      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++....-                                                         .. .  
T Consensus       157 ------~d~g~~~~~~~---------------------------------------------------------~~-~--  170 (285)
T cd06648         157 ------SDFGFCAQVSK---------------------------------------------------------EV-P--  170 (285)
T ss_pred             ------cccccchhhcc---------------------------------------------------------CC-c--
Confidence                  56665431000                                                         00 0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..                          +++||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       171 -~~~~~~~~~~--------------------------y~aPE~~~~~~~~~~~Dv~slGv~l~ell~-g~~p~~~~~~~~  222 (285)
T cd06648         171 -RRKSLVGTPY--------------------------WMAPEVISRLPYGTEVDIWSLGIMVIEMVD-GEPPYFNEPPLQ  222 (285)
T ss_pred             -ccccccCCcc--------------------------ccCHHHhcCCCCCCcccHHHHHHHHHHHHh-CCCCCcCCCHHH
Confidence             0000113333                          445555555678899999999999999999 999997766555


Q ss_pred             eccccccccccC------CC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILE------KP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~------~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+..+..+.      .+        .||..++..|+++.+++.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  269 (285)
T cd06648         223 AMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH  269 (285)
T ss_pred             HHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence            544444332111      11        4788888888888888865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.69  E-value=2.8e-17  Score=162.69  Aligned_cols=57  Identities=33%  Similarity=0.561  Sum_probs=48.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+...  .+++..+..++.|++.||+|||+++|+||||||+||+++.++
T Consensus        90 ~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~  146 (284)
T cd05079          90 LPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH  146 (284)
T ss_pred             cCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCC
Confidence            368999999987643  358889999999999999999999999999999996665543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0574|consensus

Probab=99.69  E-value=1.2e-17  Score=157.42  Aligned_cols=158  Identities=18%  Similarity=0.279  Sum_probs=122.4

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      -||+.|.++-..+  ++.++.+..++++.++||+|||...-||||||+-|||++.+|+           +|+        
T Consensus       112 AGSiSDI~R~R~K--~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~-----------AKL--------  170 (502)
T KOG0574|consen  112 AGSISDIMRARRK--PLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGI-----------AKL--------  170 (502)
T ss_pred             CCcHHHHHHHhcC--CccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccch-----------hhh--------
Confidence            3889998887665  4799999999999999999999999999999999977777764           455        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          +|||++--                                                                    
T Consensus       171 ----ADFGVAGQ--------------------------------------------------------------------  178 (502)
T KOG0574|consen  171 ----ADFGVAGQ--------------------------------------------------------------------  178 (502)
T ss_pred             ----hhccccch--------------------------------------------------------------------
Confidence                78887630                                                                    


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                                ....+.+..         -|-|+|-|||||+|..-.|+.++||||+|++..||.- |++||....+...+
T Consensus       179 ----------LTDTMAKRN---------TVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAE-G~PPYsDIHPMRAI  238 (502)
T KOG0574|consen  179 ----------LTDTMAKRN---------TVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAE-GRPPYSDIHPMRAI  238 (502)
T ss_pred             ----------hhhhHHhhC---------ccccCcccccHHHHHHhccchhhhHhhhcchhhhhhc-CCCCccccccccee
Confidence                      000011111         1347889999999999999999999999999999999 99999988877666


Q ss_pred             cccccccccCCC--------------CCcCCCCCCHHHHHHHHcC
Q psy17476        243 DRVQRGIILEKP--------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       243 ~~i~~~~~~~~p--------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      -.|-...++...              .|....+..|..|.+|+.+
T Consensus       239 FMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  239 FMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             EeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            666544333222              3556777888899888876

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.69  E-value=1.4e-17  Score=164.40  Aligned_cols=56  Identities=14%  Similarity=0.077  Sum_probs=48.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.++.   .+++..++.++.|++.||+|||+++|+||||||+||+++.++
T Consensus        79 ~~g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~  134 (278)
T cd05606          79 MNGGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG  134 (278)
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCC
Confidence            46899999997754   468999999999999999999999999999999996655443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.68  E-value=1.2e-17  Score=166.70  Aligned_cols=158  Identities=16%  Similarity=0.289  Sum_probs=108.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.    .+++..+..++.|++.||+|||+++++||||||+||+++.++           ..++      
T Consensus        98 ~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~-----------~~kl------  156 (296)
T cd06655          98 LAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDG-----------SVKL------  156 (296)
T ss_pred             cCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-----------CEEE------
Confidence            4689999998764    358889999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++....                                                 .         ...  
T Consensus       157 ------~dfg~~~~~~-------------------------------------------------~---------~~~--  170 (296)
T cd06655         157 ------TDFGFCAQIT-------------------------------------------------P---------EQS--  170 (296)
T ss_pred             ------ccCccchhcc-------------------------------------------------c---------ccc--
Confidence                  6777654100                                                 0         000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..|+|||.                          +....++.++|+|||||++|++++ |..||...+..+
T Consensus       171 -~~~~~~~~~~y~aPE~--------------------------~~~~~~~~~~Dv~slGvil~~llt-g~~pf~~~~~~~  222 (296)
T cd06655         171 -KRSTMVGTPYWMAPEV--------------------------VTRKAYGPKVDIWSLGIMAIEMVE-GEPPYLNENPLR  222 (296)
T ss_pred             -cCCCcCCCccccCcch--------------------------hcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence             0001124455666554                          444467889999999999999999 999997765543


Q ss_pred             eccccccccccC--C------------CCCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILE--K------------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~--~------------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+......+  .            .+||..++..|+++.+++.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         223 ALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             HHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            333332211111  1            15788889999999998876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=1.5e-17  Score=162.24  Aligned_cols=155  Identities=18%  Similarity=0.224  Sum_probs=106.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   ++++..+..++.|++.||.|||+.+|+||||+|+||+++.++           ..++      
T Consensus        79 ~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~-----------~~~l------  138 (260)
T cd05611          79 LNGGDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTG-----------HLKL------  138 (260)
T ss_pred             cCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC-----------cEEE------
Confidence            46899999998765   468889999999999999999999999999999996554432           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++....                                                               
T Consensus       139 ------~dfg~~~~~~~---------------------------------------------------------------  149 (260)
T cd05611         139 ------TDFGLSRNGLE---------------------------------------------------------------  149 (260)
T ss_pred             ------eecccceeccc---------------------------------------------------------------
Confidence                  67766541000                                                               


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        .....++..|++||                          .+....++.++|+||+|+++|||++ |..||...+..+
T Consensus       150 --~~~~~~~~~y~~pe--------------------------~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~  200 (260)
T cd05611         150 --NKKFVGTPDYLAPE--------------------------TILGVGDDKMSDWWSLGCVIFEFLF-GYPPFHAETPDA  200 (260)
T ss_pred             --cccCCCCcCccChh--------------------------hhcCCCCcchhhhHHHHHHHHHHHH-CCCCCCCCCHHH
Confidence              00011333444444                          4444567899999999999999999 999998777666


Q ss_pred             eccccccccccC-------CC--------CCcCCCCCCHHHH---HHHHcC
Q psy17476        241 VVDRVQRGIILE-------KP--------KAWYVGDMSRQRA---ESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~-------~p--------~~w~~~~~~R~~a---eeLL~~  273 (513)
                      +...+..+....       .+        +||..++..|+.+   +++|.+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~  251 (260)
T cd05611         201 VFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH  251 (260)
T ss_pred             HHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence            555543322110       11        4677777777743   566654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.68  E-value=1.7e-17  Score=166.07  Aligned_cols=56  Identities=14%  Similarity=0.141  Sum_probs=48.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++....   .+++..+..++.|++.||+|||+++|+||||||+||+++.++
T Consensus        83 ~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~  138 (305)
T cd05609          83 VEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMG  138 (305)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCC
Confidence            46899999998764   468889999999999999999999999999999996655443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.68  E-value=1.3e-17  Score=163.09  Aligned_cols=165  Identities=20%  Similarity=0.300  Sum_probs=107.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   ++++..+..++.|++.||+|||+.+|+|+||||+||+++.++           ..++      
T Consensus        84 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-----------~~~l------  143 (265)
T cd06631          84 VPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG-----------IIKL------  143 (265)
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCC-----------eEEe------
Confidence            46899999998764   358889999999999999999999999999999996554433           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++.......                                          ...         ...   
T Consensus       144 ------~dfg~~~~~~~~~~------------------------------------------~~~---------~~~---  163 (265)
T cd06631         144 ------IDFGCARRLAWVGL------------------------------------------HGT---------HSN---  163 (265)
T ss_pred             ------ccchhhHhhhhccc------------------------------------------ccc---------ccc---
Confidence                  67766541000000                                          000         000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|||                          ++....++.++|+||+||++|++++ |..||...+..+
T Consensus       164 -~~~~~~~~~~~~~pe--------------------------~~~~~~~~~~~Dv~slG~~~~~l~~-g~~p~~~~~~~~  215 (265)
T cd06631         164 -MLKSMHGTPYWMAPE--------------------------VINESGYGRKSDIWSIGCTVFEMAT-GKPPLASMDRLA  215 (265)
T ss_pred             -cccccCCCccccChh--------------------------hhcCCCCcchhhHHHHHHHHHHHHh-CCCccccCChHH
Confidence             000112444455554                          4555567899999999999999999 999997655433


Q ss_pred             eccccccc--cccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRG--IILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~--~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+...  ..++.+            +||..++..||.+.+++.+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  262 (265)
T cd06631         216 AMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH  262 (265)
T ss_pred             HHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            32222211  111111            4788888888888888865

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.68  E-value=2.2e-17  Score=164.71  Aligned_cols=158  Identities=18%  Similarity=0.288  Sum_probs=108.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.    .+++..+..++.|++.||.|||+++|+||||||+||+++.++           ..++      
T Consensus        98 ~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~-----------~~~l------  156 (297)
T cd06656          98 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG-----------SVKL------  156 (297)
T ss_pred             cCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-----------CEEE------
Confidence            4789999999764    357889999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                          ....  
T Consensus       157 ------~Dfg~~~~~~----------------------------------------------------------~~~~--  170 (297)
T cd06656         157 ------TDFGFCAQIT----------------------------------------------------------PEQS--  170 (297)
T ss_pred             ------CcCccceEcc----------------------------------------------------------CCcc--
Confidence                  7777664100                                                          0000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..                          +++||.+....++.++|+||+||++|++++ |..||...+...
T Consensus       171 -~~~~~~~~~~--------------------------y~aPE~~~~~~~~~~~Di~slGvil~~l~t-g~~pf~~~~~~~  222 (297)
T cd06656         171 -KRSTMVGTPY--------------------------WMAPEVVTRKAYGPKVDIWSLGIMAIEMVE-GEPPYLNENPLR  222 (297)
T ss_pred             -CcCcccCCcc--------------------------ccCHHHHcCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCcch
Confidence             0000112333                          445555556677899999999999999999 999997655433


Q ss_pred             eccccccccccC--C------------CCCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILE--K------------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~--~------------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.....++  .            .+||..++..|+++++++.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (297)
T cd06656         223 ALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH  269 (297)
T ss_pred             heeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            332232221111  1            15788888899999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.68  E-value=1.6e-17  Score=163.34  Aligned_cols=163  Identities=29%  Similarity=0.541  Sum_probs=108.8

Q ss_pred             CCCcHHHHHHhcCCC------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceE
Q psy17476          2 RHGSLLNYLRRHENT------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVV   75 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~   75 (513)
                      ++|+|.+++......      ..+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++ 
T Consensus        91 ~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~-----------~~~l-  158 (275)
T cd05046          91 DLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQR-----------EVKV-  158 (275)
T ss_pred             CCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCC-----------cEEE-
Confidence            679999999876521      1468999999999999999999999999999999996655543           2233 


Q ss_pred             EEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeec
Q psy17476         76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDD  155 (513)
Q Consensus        76 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  155 (513)
                                 ++|++++.....                                                         
T Consensus       159 -----------~~~~~~~~~~~~---------------------------------------------------------  170 (275)
T cd05046         159 -----------SLLSLSKDVYNS---------------------------------------------------------  170 (275)
T ss_pred             -----------cccccccccCcc---------------------------------------------------------
Confidence                       555554310000                                                         


Q ss_pred             CCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCC
Q psy17476        156 TQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGR  235 (513)
Q Consensus       156 ~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~  235 (513)
                       .  ........++..|+||                          |++....++.++|+||||+++|++++.|..||..
T Consensus       171 -~--~~~~~~~~~~~~y~~P--------------------------E~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~  221 (275)
T cd05046         171 -E--YYKLRNALIPLRWLAP--------------------------EAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYG  221 (275)
T ss_pred             -c--ccccCCceeEEeecCh--------------------------hhhccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence             0  0000001123334444                          4444456688999999999999999878889977


Q ss_pred             CCcceeccccccccc-c----CCC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        236 LKNTEVVDRVQRGII-L----EKP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       236 ~~~~~~~~~i~~~~~-~----~~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....++...+..+.. .    ..|        +||..++..|+++.+++..
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         222 LSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             cchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            666555555542211 1    111        5788888888888887754

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.68  E-value=1.7e-17  Score=164.02  Aligned_cols=57  Identities=32%  Similarity=0.518  Sum_probs=49.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+...  .+++..+..++.|++.||+|||++||+||||||+||+++.++
T Consensus        89 ~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~  145 (284)
T cd05081          89 LPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESEN  145 (284)
T ss_pred             cCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCC
Confidence            468999999987643  358889999999999999999999999999999996655543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=1.7e-17  Score=162.53  Aligned_cols=167  Identities=17%  Similarity=0.240  Sum_probs=109.4

Q ss_pred             CCCCcHHHHHHhcC-CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHE-NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.+++.... ..-.+++..++.++.|++.||+|||+++++||||+|+||+++.++           ..++     
T Consensus        91 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~-----------~~~l-----  154 (275)
T cd06608          91 CGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNA-----------EVKL-----  154 (275)
T ss_pred             CCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCC-----------eEEE-----
Confidence            46789999988743 111468899999999999999999999999999999996555443           2233     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .||+++....                                                          .... 
T Consensus       155 -------~d~~~~~~~~----------------------------------------------------------~~~~-  168 (275)
T cd06608         155 -------VDFGVSAQLD----------------------------------------------------------STLG-  168 (275)
T ss_pred             -------CCCccceecc----------------------------------------------------------cchh-
Confidence                   5666543000                                                          0000 


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                        ......|+..|+|||++.....                     ....++.++|+||+||++|++++ |..||......
T Consensus       169 --~~~~~~~~~~y~aPE~~~~~~~---------------------~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~  224 (275)
T cd06608         169 --RRNTFIGTPYWMAPEVIACDEQ---------------------PDASYDARSDVWSLGITAIELAD-GKPPLCDMHPM  224 (275)
T ss_pred             --hhcCccccccccCHhHhccccc---------------------ccCCccccccHHHhHHHHHHHHh-CCCCccccchH
Confidence              0011225666777776543210                     12356889999999999999999 99999765443


Q ss_pred             eeccccccccccC--------------CCCCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILE--------------KPKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~--------------~p~~w~~~~~~R~~aeeLL~~  273 (513)
                      .....+.......              ..+||..++..||++++++.+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~  272 (275)
T cd06608         225 RALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH  272 (275)
T ss_pred             HHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            3333332221111              014677888888888888764

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.68  E-value=2.6e-17  Score=163.60  Aligned_cols=58  Identities=31%  Similarity=0.493  Sum_probs=48.5

Q ss_pred             CCCCcHHHHHHhcCC--------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHEN--------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~--------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++.+...        ...+++..++.++.|++.||+|||+++|+||||||+||+++.+
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~  166 (296)
T cd05051         101 MENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKN  166 (296)
T ss_pred             CCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCC
Confidence            367999999988541        1136888999999999999999999999999999999665554

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.68  E-value=2.5e-17  Score=160.87  Aligned_cols=162  Identities=17%  Similarity=0.250  Sum_probs=109.0

Q ss_pred             CCCCcHHHHHHhcCC-CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHEN-TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.+++.+... ...+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++     
T Consensus        84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~-----------~~~l-----  147 (267)
T cd08224          84 ADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATG-----------VVKL-----  147 (267)
T ss_pred             CCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCC-----------cEEE-----
Confidence            468999999986422 22468899999999999999999999999999999996555443           3344     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .||++++...                                               .....           
T Consensus       148 -------~d~~~~~~~~-----------------------------------------------~~~~~-----------  162 (267)
T cd08224         148 -------GDLGLGRFFS-----------------------------------------------SKTTA-----------  162 (267)
T ss_pred             -------eccceeeecc-----------------------------------------------CCCcc-----------
Confidence                   6666654000                                               00000           


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC--
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK--  237 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~--  237 (513)
                         .....++..|                          ++||++....++.++|+||+||++|+|++ |..||....  
T Consensus       163 ---~~~~~~~~~y--------------------------~apE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~  212 (267)
T cd08224         163 ---AHSLVGTPYY--------------------------MSPERIHENGYNFKSDIWSLGCLLYEMAA-LQSPFYGDKMN  212 (267)
T ss_pred             ---cceecCCccc--------------------------cCHHHhccCCCCchhcHHHHHHHHHHHHH-CCCCcccCCcc
Confidence               0001133334                          44555555678899999999999999999 999985433  


Q ss_pred             cceeccccccccccCCC-------------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 NTEVVDRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ~~~~~~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..++.+.+..+...+.|             .||...+..||++.+++..
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~  261 (267)
T cd08224         213 LYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQV  261 (267)
T ss_pred             HHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            22344444444333333             4788888999999887653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.68  E-value=1.2e-17  Score=153.01  Aligned_cols=47  Identities=19%  Similarity=0.202  Sum_probs=41.0

Q ss_pred             CcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         4 g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      |||.+++++++.  ++++..++.++.|++.||+|||+++      ||+|||++.+
T Consensus         1 GsL~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~   47 (176)
T smart00750        1 VSLADILEVRGR--PLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWD   47 (176)
T ss_pred             CcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCc
Confidence            899999998654  4699999999999999999999998      9999665554

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.68  E-value=1.5e-17  Score=172.76  Aligned_cols=147  Identities=24%  Similarity=0.425  Sum_probs=99.6

Q ss_pred             CchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccccccCCCCcccccCCeEE
Q psy17476         19 GNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYE   98 (513)
Q Consensus        19 ~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~   98 (513)
                      +++..+..++.|++.||+|||+.+|+||||||+|||++.++           ..++            .|||+++...  
T Consensus       236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~-----------~~kL------------~DfGla~~~~--  290 (401)
T cd05107         236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGK-----------LVKI------------CDFGLARDIM--  290 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCC-----------EEEE------------EecCcceecc--
Confidence            56778899999999999999999999999999996554432           3344            7787765100  


Q ss_pred             eeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCce
Q psy17476         99 VMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV  178 (513)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~  178 (513)
                        .                                                     ..  .........++..|      
T Consensus       291 --~-----------------------------------------------------~~--~~~~~~~~~~~~~y------  307 (401)
T cd05107         291 --R-----------------------------------------------------DS--NYISKGSTFLPLKW------  307 (401)
T ss_pred             --c-----------------------------------------------------cc--ccccCCCcCCCCce------
Confidence              0                                                     00  00000001122333      


Q ss_pred             eeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee-ccccccccccCCC---
Q psy17476        179 KEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV-VDRVQRGIILEKP---  254 (513)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~-~~~i~~~~~~~~p---  254 (513)
                                          |+||++....++.++|+|||||++|||++.|..||......+. ...+..+.+++.|   
T Consensus       308 --------------------~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~  367 (401)
T cd05107         308 --------------------MAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHA  367 (401)
T ss_pred             --------------------eChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCC
Confidence                                4455556667889999999999999999878899976654443 3334445444333   


Q ss_pred             ---------CCcCCCCCCHHHHHHHHcC
Q psy17476        255 ---------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       255 ---------~~w~~~~~~R~~aeeLL~~  273 (513)
                               +||..++..||++.+++..
T Consensus       368 ~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         368 SDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                     5899999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=2.1e-17  Score=166.19  Aligned_cols=189  Identities=16%  Similarity=0.189  Sum_probs=112.7

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      ++|+|.+++.+.... .+++..+..++.|++.||+|||+.+++||||||+||+++.++           ..++       
T Consensus        84 ~~~~L~~~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~-----------~~~l-------  144 (316)
T cd05574          84 PGGELFRLLQRQPGK-CLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESG-----------HIML-------  144 (316)
T ss_pred             CCCCHHHHHHhCCCC-ccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCC-----------CEEE-------
Confidence            578999999875432 468889999999999999999999999999999996666554           2233       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .||+++......  ..      ....                  .  ...........+.....           
T Consensus       145 -----~dfg~~~~~~~~--~~------~~~~------------------~--~~~~~~~~~~~~~~~~~-----------  180 (316)
T cd05574         145 -----SDFDLSKQSDVE--PP------PVSK------------------A--LRKGSRRSSVNSIPSET-----------  180 (316)
T ss_pred             -----eecchhhccccc--cc------cccc------------------c--cccccccccccccchhh-----------
Confidence                 555554411000  00      0000                  0  00000000000000000           


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                               ...++....          ...-|+..+++||++....++.++|+||||+++|+|++ |..||...+..+.
T Consensus       181 ---------~~~~~~~~~----------~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~  240 (316)
T cd05574         181 ---------FSEEPSFRS----------NSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLY-GTTPFKGSNRDET  240 (316)
T ss_pred             ---------hcccccCCC----------CCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhh-CCCCCCCCchHHH
Confidence                     000000000          00113445667777777788999999999999999999 9999987765544


Q ss_pred             cccccc-ccccCC----C--------CCcCCCCCCHHH----HHHHHcC
Q psy17476        242 VDRVQR-GIILEK----P--------KAWYVGDMSRQR----AESILKQ  273 (513)
Q Consensus       242 ~~~i~~-~~~~~~----p--------~~w~~~~~~R~~----aeeLL~~  273 (513)
                      ...+.. ....+.    +        .||..++..|++    ++++|.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         241 FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             HHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence            433321 111111    1        578888899998    8888876

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.68  E-value=2.7e-17  Score=161.13  Aligned_cols=57  Identities=25%  Similarity=0.318  Sum_probs=47.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccC
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSL   57 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~   57 (513)
                      +++|+|.+++......+..++..+..++.|++.||+|||+++|+||||||+||+++.
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~  143 (268)
T cd06624          87 VPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT  143 (268)
T ss_pred             CCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC
Confidence            468999999987643322277889999999999999999999999999999965543

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.68  E-value=1.7e-17  Score=165.63  Aligned_cols=158  Identities=20%  Similarity=0.354  Sum_probs=107.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.    .+++..++.++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       100 ~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~-----------~~kL------  158 (297)
T cd06659         100 LQGGALTDIVSQT----RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDG-----------RVKL------  158 (297)
T ss_pred             CCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCC-----------cEEE------
Confidence            4688999987653    357889999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                          ....  
T Consensus       159 ------~dfg~~~~~~----------------------------------------------------------~~~~--  172 (297)
T cd06659         159 ------SDFGFCAQIS----------------------------------------------------------KDVP--  172 (297)
T ss_pred             ------eechhHhhcc----------------------------------------------------------cccc--
Confidence                  6777654100                                                          0000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+.+|+||                          |++....++.++|+|||||++|||++ |..||......+
T Consensus       173 -~~~~~~~~~~y~aP--------------------------E~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~  224 (297)
T cd06659         173 -KRKSLVGTPYWMAP--------------------------EVISRTPYGTEVDIWSLGIMVIEMVD-GEPPYFSDSPVQ  224 (297)
T ss_pred             -cccceecCccccCH--------------------------HHHccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence             00011244445554                          44555567899999999999999999 999997666544


Q ss_pred             eccccccccccC--------------CCCCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILE--------------KPKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~--------------~p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.......              ...+|..++..|+.+.+++.+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         225 AMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            444433221110              014677888888888888875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.68  E-value=2.3e-17  Score=167.05  Aligned_cols=57  Identities=28%  Similarity=0.360  Sum_probs=48.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      |++|+|.+++.+.... ++++..++.++.|++.||+|||+++|+||||||+||+++.+
T Consensus        81 ~~~~~l~~~l~~~~~~-~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~  137 (328)
T cd08226          81 MAYGSANSLLKTYFPE-GMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGD  137 (328)
T ss_pred             ccCCCHHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCC
Confidence            4678999999886433 47888999999999999999999999999999999665544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.68  E-value=2.9e-17  Score=162.60  Aligned_cols=166  Identities=23%  Similarity=0.316  Sum_probs=113.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh-cceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER-HNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~-~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|..++.+......+++..+..++.|++.||.|||+ .+|+||||||+||+++.++           ..++     
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~-----------~~~l-----  144 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG-----------QVKL-----  144 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC-----------CEEE-----
Confidence            4689999999875322246899999999999999999997 5999999999996555443           3344     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||++....                                                         ..    
T Consensus       145 -------~dfg~~~~~~---------------------------------------------------------~~----  156 (286)
T cd06622         145 -------CDFGVSGNLV---------------------------------------------------------AS----  156 (286)
T ss_pred             -------eecCCccccc---------------------------------------------------------CC----
Confidence                   6777664100                                                         00    


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                        ......++.+|++||.+.....                    -....++.++|+||+||++|||++ |..||......
T Consensus       157 --~~~~~~~~~~y~aPE~~~~~~~--------------------~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~  213 (286)
T cd06622         157 --LAKTNIGCQSYMAPERIKSGGP--------------------NQNPTYTVQSDVWSLGLSILEMAL-GRYPYPPETYA  213 (286)
T ss_pred             --ccccCCCccCccCcchhcCCCC--------------------CccCCCCcccchHhHHHHHHHHHh-CCCCCCCcchh
Confidence              0011125567788877643211                    012246889999999999999999 99999765554


Q ss_pred             eeccccc---cccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQ---RGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~---~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .....+.   .+..+..+            +||..++..|+.+.+++.+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         214 NIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             hHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence            4433322   22222222            5788899999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.68  E-value=2.1e-17  Score=162.91  Aligned_cols=158  Identities=22%  Similarity=0.286  Sum_probs=112.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++..+    ++++..+..++.|++.||+|||+++++|+||+|+||+++.++           ..++      
T Consensus        84 ~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~-----------~~~l------  142 (277)
T cd06640          84 LGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG-----------DVKL------  142 (277)
T ss_pred             CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCC-----------CEEE------
Confidence            4689999999753    357889999999999999999999999999999996655443           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++....                                                         ....   
T Consensus       143 ------~dfg~~~~~~---------------------------------------------------------~~~~---  156 (277)
T cd06640         143 ------ADFGVAGQLT---------------------------------------------------------DTQI---  156 (277)
T ss_pred             ------cccccceecc---------------------------------------------------------CCcc---
Confidence                  6777664100                                                         0000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..|+|                          ||++....++.++|+|||||++|||++ |..||......+
T Consensus       157 -~~~~~~~~~~y~a--------------------------pE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~  208 (277)
T cd06640         157 -KRNTFVGTPFWMA--------------------------PEVIQQSAYDSKADIWSLGITAIELAK-GEPPNSDMHPMR  208 (277)
T ss_pred             -ccccccCcccccC--------------------------HhHhccCCCccHHHHHHHHHHHHHHHH-CCCCCCCcChHh
Confidence             0000113334444                          444555567899999999999999999 999998776665


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+..+..+..+            +||..++..||++.+++.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         209 VLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             HhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            55555444333222            5899999999999999876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.67  E-value=3.4e-17  Score=164.44  Aligned_cols=58  Identities=24%  Similarity=0.238  Sum_probs=49.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.++... .+++..+..+++|+++||+|||+++|+||||||+||+++.++
T Consensus        81 ~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~  138 (314)
T cd08216          81 MAYGSCEDLLKTHFPE-GLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDG  138 (314)
T ss_pred             cCCCCHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCC
Confidence            4689999999986433 468889999999999999999999999999999996665543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.67  E-value=2.3e-17  Score=162.64  Aligned_cols=158  Identities=21%  Similarity=0.281  Sum_probs=110.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++..+    .+++..++.++.|++.||.|||+++++|+||+|+||+++.++           ..++      
T Consensus        84 ~~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~-----------~~~l------  142 (277)
T cd06642          84 LGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG-----------DVKL------  142 (277)
T ss_pred             cCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC-----------CEEE------
Confidence            4689999998753    368889999999999999999999999999999996655443           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                          ..... 
T Consensus       143 ------~dfg~~~~~~----------------------------------------------------------~~~~~-  157 (277)
T cd06642         143 ------ADFGVAGQLT----------------------------------------------------------DTQIK-  157 (277)
T ss_pred             ------cccccccccc----------------------------------------------------------Ccchh-
Confidence                  6777654100                                                          00000 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        .....|+..|                          ++||++....++.++|+|||||++|||++ |..||......+
T Consensus       158 --~~~~~~~~~y--------------------------~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~  208 (277)
T cd06642         158 --RNTFVGTPFW--------------------------MAPEVIKQSAYDFKADIWSLGITAIELAK-GEPPNSDLHPMR  208 (277)
T ss_pred             --hhcccCcccc--------------------------cCHHHhCcCCCchhhhHHHHHHHHHHHHh-CCCCCcccchhh
Confidence              0001133334                          45555666678899999999999999999 999997665555


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+..+..+..+            .||...+..||++.+++.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         209 VLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             HHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            44444333222111            4888899999999998875

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=2.7e-17  Score=161.86  Aligned_cols=159  Identities=17%  Similarity=0.255  Sum_probs=108.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++..+    .+++..+..++.|++.||.|||+.+|+||||+|+||+++.++           ..++      
T Consensus        84 ~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~-----------~~~l------  142 (277)
T cd06917          84 AEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTG-----------NVKL------  142 (277)
T ss_pred             CCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCC-----------CEEE------
Confidence            4689999998764    468899999999999999999999999999999996665543           2233      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++...                                                          .....  
T Consensus       143 ------~dfg~~~~~----------------------------------------------------------~~~~~--  156 (277)
T cd06917         143 ------CDFGVAALL----------------------------------------------------------NQNSS--  156 (277)
T ss_pred             ------ccCCceeec----------------------------------------------------------CCCcc--
Confidence                  677765410                                                          00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|||+...                         ...++.++|+|||||++|+|++ |..||......+
T Consensus       157 -~~~~~~~~~~y~aPE~~~~-------------------------~~~~~~~~Dv~slG~~l~~ll~-g~~p~~~~~~~~  209 (277)
T cd06917         157 -KRSTFVGTPYWMAPEVITE-------------------------GKYYDTKADIWSLGITIYEMAT-GNPPYSDVDAFR  209 (277)
T ss_pred             -ccccccCCcceeCHHHhcc-------------------------CCccccchhHHHHHHHHHHHHh-CCCCCCCCChhh
Confidence             0001124455566554422                         2346889999999999999999 999997766544


Q ss_pred             eccccccccccCCC-------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.....+..+             .||..++..|+.+.+++.+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         210 AMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             hhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence            44333322211111             4788889999999988865

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.67  E-value=2.3e-17  Score=160.18  Aligned_cols=162  Identities=21%  Similarity=0.344  Sum_probs=110.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++++|.+++.+.... .+++..+..++.|++.||+|||+++++||||||+||+++.++          ...++      
T Consensus        81 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~----------~~~~l------  143 (257)
T cd08225          81 CDGGDLMKRINRQRGV-LFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNG----------MVAKL------  143 (257)
T ss_pred             CCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCC----------CeEEe------
Confidence            4689999999875533 468899999999999999999999999999999996554432          22234      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+.+...                                                          .....  
T Consensus       144 ------~d~~~~~~~----------------------------------------------------------~~~~~--  157 (257)
T cd08225         144 ------GDFGIARQL----------------------------------------------------------NDSME--  157 (257)
T ss_pred             ------cccccchhc----------------------------------------------------------cCCcc--
Confidence                  566654300                                                          00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       .....                          .+.+.+++||++....++.++|+||+|+++||+++ |..||...+..+
T Consensus       158 -~~~~~--------------------------~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~  209 (257)
T cd08225         158 -LAYTC--------------------------VGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCT-LKHPFEGNNLHQ  209 (257)
T ss_pred             -ccccc--------------------------CCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCccHHH
Confidence             00000                          12334556666666678999999999999999999 999998666544


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+..+...+.+            +||...+..||++.+++.+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         210 LVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             HHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            44433332222111            5788888899999988865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.67  E-value=3.3e-17  Score=163.16  Aligned_cols=158  Identities=18%  Similarity=0.303  Sum_probs=108.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..    +++..+..++.|++.||+|||+++++||||||+||+++.++           ..++      
T Consensus        98 ~~~~~L~~~~~~~~----l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~-----------~~kL------  156 (293)
T cd06647          98 LAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-----------SVKL------  156 (293)
T ss_pred             CCCCcHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCC-----------CEEE------
Confidence            46899999998652    57889999999999999999999999999999996655543           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++....                                                          ..+.  
T Consensus       157 ------~dfg~~~~~~----------------------------------------------------------~~~~--  170 (293)
T cd06647         157 ------TDFGFCAQIT----------------------------------------------------------PEQS--  170 (293)
T ss_pred             ------ccCcceeccc----------------------------------------------------------cccc--
Confidence                  6776654100                                                          0000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|++                          ||++....++.++|+|||||++|++++ |..||...+..+
T Consensus       171 -~~~~~~~~~~y~~--------------------------PE~~~~~~~~~~~Dv~slG~ll~~ll~-g~~pf~~~~~~~  222 (293)
T cd06647         171 -KRSTMVGTPYWMA--------------------------PEVVTRKAYGPKVDIWSLGIMAIEMVE-GEPPYLNENPLR  222 (293)
T ss_pred             -ccccccCChhhcC--------------------------chhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChhh
Confidence             0000113334444                          444555567889999999999999999 999998766544


Q ss_pred             eccccccccccCC--------------CCCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK--------------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~--------------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.....+..              .+||..++..|+.+.+++.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         223 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             heeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            4333322211111              15788889999999998876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=2.4e-17  Score=160.62  Aligned_cols=162  Identities=20%  Similarity=0.237  Sum_probs=108.1

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      ++|+|.+++.....  ++++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++       
T Consensus        83 ~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~-----------~~~l-------  142 (262)
T cd06613          83 GGGSLQDIYQVTRG--PLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDG-----------DVKL-------  142 (262)
T ss_pred             CCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCC-----------CEEE-------
Confidence            57899999988643  368899999999999999999999999999999996655543           2344       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .|||++....                                                          ....   
T Consensus       143 -----~d~g~~~~~~----------------------------------------------------------~~~~---  156 (262)
T cd06613         143 -----ADFGVSAQLT----------------------------------------------------------ATIA---  156 (262)
T ss_pred             -----Cccccchhhh----------------------------------------------------------hhhh---
Confidence                 6777654100                                                          0000   


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      ......++..|++||.+....                       ...++.++|+||+||++|||++ |..||...+..+.
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~~~-----------------------~~~~~~~~Di~slG~~l~~~~t-g~~p~~~~~~~~~  212 (262)
T cd06613         157 KRKSFIGTPYWMAPEVAAVER-----------------------KGGYDGKCDIWALGITAIELAE-LQPPMFDLHPMRA  212 (262)
T ss_pred             ccccccCCccccCchhhcccc-----------------------cCCcCchhhhHHHHHHHHHHHh-CCCCCCCCCHHHH
Confidence            001112455566666543210                       0156889999999999999999 9999987654443


Q ss_pred             ccccccc-cccCC---------------CCCcCCCCCCHHHHHHHHcC
Q psy17476        242 VDRVQRG-IILEK---------------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       242 ~~~i~~~-~~~~~---------------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ...+... ...+.               .+||..++..|+++.+++.+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         213 LFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             HHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            3333221 11100               15788888888888888764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0579|consensus

Probab=99.67  E-value=2.5e-17  Score=168.42  Aligned_cols=164  Identities=18%  Similarity=0.260  Sum_probs=121.1

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .||-++..|-.-+.  +|.++++..+|+|++.||.|||+++|||||||+-|||...+|.  |         ++       
T Consensus       112 ~GGAVDaimlEL~r--~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGd--i---------rL-------  171 (1187)
T KOG0579|consen  112 GGGAVDAIMLELGR--VLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGD--I---------RL-------  171 (1187)
T ss_pred             CCchHhHHHHHhcc--ccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCc--E---------ee-------
Confidence            57888898888765  4699999999999999999999999999999999988777763  2         22       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           +|||++-.                                             ...+..+               
T Consensus       172 -----ADFGVSAK---------------------------------------------n~~t~qk---------------  186 (1187)
T KOG0579|consen  172 -----ADFGVSAK---------------------------------------------NKSTRQK---------------  186 (1187)
T ss_pred             -----eccccccc---------------------------------------------chhHHhh---------------
Confidence                 66766530                                             0000111               


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                       ..++.||+.||+||++.=                     |.....+|+.++||||||+++.||.- +.+|-...++..+
T Consensus       187 -RDsFIGTPYWMAPEVvmC---------------------ET~KD~PYDykaDiWSlGITLIEMAq-iEPPHhelnpMRV  243 (1187)
T KOG0579|consen  187 -RDSFIGTPYWMAPEVVMC---------------------ETFKDQPYDYKADIWSLGITLIEMAQ-IEPPHHELNPMRV  243 (1187)
T ss_pred             -hccccCCcccccchheee---------------------ccccCCCchhhhhHHhhhhHHHHHhc-cCCCccccchHHH
Confidence             112347777777776531                     22445789999999999999999998 9999998888888


Q ss_pred             ccccccccccCC--C------------CCcCCCCCCHHHHHHHHcC
Q psy17476        242 VDRVQRGIILEK--P------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       242 ~~~i~~~~~~~~--p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +-+|.+..++..  |            .|...++..||.+.+||.+
T Consensus       244 llKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  244 LLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH  289 (1187)
T ss_pred             HHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence            777765554433  2            3555677788888888776

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.67  E-value=1.4e-17  Score=175.47  Aligned_cols=54  Identities=17%  Similarity=0.210  Sum_probs=46.8

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      .|+|.+++.....  .+++..++.++.|++.||+|||++|||||||||+|||++.+
T Consensus       243 ~~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~  296 (461)
T PHA03211        243 RSDLYTYLGARLR--PLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGP  296 (461)
T ss_pred             CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCC
Confidence            5789999987544  36899999999999999999999999999999999665554

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=4.1e-17  Score=159.59  Aligned_cols=54  Identities=19%  Similarity=0.231  Sum_probs=46.9

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      ++|+|.+++.+..   .+++..++.++.|++.||.|||+++++||||||+||+++.+
T Consensus        89 ~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~  142 (264)
T cd06653          89 PGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSA  142 (264)
T ss_pred             CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC
Confidence            6889999998754   35788999999999999999999999999999999665544

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.67  E-value=6.6e-17  Score=159.44  Aligned_cols=55  Identities=38%  Similarity=0.596  Sum_probs=48.2

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      ++|+|.+++.+....  +++..+..++.|++.||+|||+++|+||||||+||+++.+
T Consensus        91 ~~~~l~~~l~~~~~~--~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~  145 (284)
T cd05038          91 PSGSLRDYLQRHRDQ--INLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESE  145 (284)
T ss_pred             CCCCHHHHHHhCccc--cCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC
Confidence            689999999886543  5888999999999999999999999999999999665544

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.67  E-value=3.4e-17  Score=159.82  Aligned_cols=158  Identities=22%  Similarity=0.272  Sum_probs=107.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++++|+||||+||+++.++           ..++      
T Consensus        75 ~~~~~L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~-----------~~~l------  134 (262)
T cd05572          75 CLGGELWTILRDRG---LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNG-----------YVKL------  134 (262)
T ss_pred             CCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCC-----------CEEE------
Confidence            46899999998864   368889999999999999999999999999999996655543           2333      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++....                                                 +        .    
T Consensus       135 ------~df~~~~~~~~-------------------------------------------------~--------~----  147 (262)
T cd05572         135 ------VDFGFAKKLKS-------------------------------------------------G--------Q----  147 (262)
T ss_pred             ------eeCCcccccCc-------------------------------------------------c--------c----
Confidence                  56666541000                                                 0        0    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC--c
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK--N  238 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~--~  238 (513)
                       ......++..|+|||                          ++....++.++|+||+|+++|++++ |..||....  .
T Consensus       148 -~~~~~~~~~~~~~PE--------------------------~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~  199 (262)
T cd05572         148 -KTWTFCGTPEYVAPE--------------------------IILNKGYDFSVDYWSLGILLYELLT-GRPPFGEDDEDP  199 (262)
T ss_pred             -ccccccCCcCccChh--------------------------HhcCCCCCChhhhhhhHHHHHHHHh-CCCCcCCCCCCH
Confidence             000011344455544                          4445567899999999999999999 999997665  4


Q ss_pred             ceecccccc-ccccCCC------------CCcCCCCCCHHH-----HHHHHcC
Q psy17476        239 TEVVDRVQR-GIILEKP------------KAWYVGDMSRQR-----AESILKQ  273 (513)
Q Consensus       239 ~~~~~~i~~-~~~~~~p------------~~w~~~~~~R~~-----aeeLL~~  273 (513)
                      .++...+.. ...+..|            +||..++..|+.     +++++.+
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~  252 (262)
T cd05572         200 MEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH  252 (262)
T ss_pred             HHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence            444444332 1222222            577788888887     7777764

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.67  E-value=4e-17  Score=163.70  Aligned_cols=55  Identities=29%  Similarity=0.403  Sum_probs=47.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh-cceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER-HNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~-~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++++..   .+++..+..++.|++.||+|||+ .+++||||||+||+++.+
T Consensus        81 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~  136 (308)
T cd06615          81 MDGGSLDQVLKKAG---RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSR  136 (308)
T ss_pred             cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecC
Confidence            36899999998764   36888999999999999999998 589999999999655444

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.67  E-value=5.5e-17  Score=161.60  Aligned_cols=164  Identities=27%  Similarity=0.530  Sum_probs=107.7

Q ss_pred             CCCCcHHHHHHhcCCC--------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCC
Q psy17476          1 MRHGSLLNYLRRHENT--------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRP   72 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~--------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~   72 (513)
                      +++|+|.+++.+....        ..+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~-----------~~  169 (296)
T cd05095         101 MENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNY-----------TI  169 (296)
T ss_pred             CCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCC-----------CE
Confidence            4689999999875321        1256778999999999999999999999999999996554432           33


Q ss_pred             ceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEE
Q psy17476         73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEV  152 (513)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  152 (513)
                      ++            .|||+++..                                                 ..+...  
T Consensus       170 ~l------------~dfg~~~~~-------------------------------------------------~~~~~~--  186 (296)
T cd05095         170 KI------------ADFGMSRNL-------------------------------------------------YSGDYY--  186 (296)
T ss_pred             Ee------------ccCcccccc-------------------------------------------------cCCcce--
Confidence            44            777776510                                                 000000  


Q ss_pred             eecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee-cCCC
Q psy17476        153 MDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT-CGKM  231 (513)
Q Consensus       153 ~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t-~g~~  231 (513)
                                  ...+.. ..                     .+.+++||++....++.++|+|||||++|||++ +|..
T Consensus       187 ------------~~~~~~-~~---------------------~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~  232 (296)
T cd05095         187 ------------RIQGRA-VL---------------------PIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQ  232 (296)
T ss_pred             ------------eccCcC-cC---------------------ccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCC
Confidence                        000000 00                     112355666666788999999999999999997 4778


Q ss_pred             CCCCCCcceecccccc-------ccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        232 PYGRLKNTEVVDRVQR-------GIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       232 pf~~~~~~~~~~~i~~-------~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      ||...+..+++..+..       ....+.+            .||..++..||++.+++.
T Consensus       233 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         233 PYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             CccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            8876665554432211       1111111            578888899998888764

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.66  E-value=3.9e-17  Score=162.17  Aligned_cols=56  Identities=18%  Similarity=0.151  Sum_probs=48.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||+|+||+++.++
T Consensus        83 ~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~  138 (290)
T cd05580          83 VPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG  138 (290)
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC
Confidence            36899999998874   468889999999999999999999999999999996665553

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0695|consensus

Probab=99.66  E-value=1.5e-17  Score=158.79  Aligned_cols=120  Identities=22%  Similarity=0.367  Sum_probs=95.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ++||+|--++.+.+   .++++.++.+..+|+.||.|||++|||+||||..|||++..|+           -|+      
T Consensus       333 v~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaegh-----------ikl------  392 (593)
T KOG0695|consen  333 VNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGH-----------IKL------  392 (593)
T ss_pred             ecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCc-----------eee------
Confidence            47899998888876   3689999999999999999999999999999999977666664           233      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|.|+++.                                                .+++|+..          
T Consensus       393 ------tdygmcke------------------------------------------------~l~~gd~t----------  408 (593)
T KOG0695|consen  393 ------TDYGMCKE------------------------------------------------GLGPGDTT----------  408 (593)
T ss_pred             ------cccchhhc------------------------------------------------CCCCCccc----------
Confidence                  67777761                                                12333322          


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCC
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYG  234 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~  234 (513)
                         ...+||+.|++||.++..                          .|+..+|+|++|++++||++ |+.||+
T Consensus       409 ---stfcgtpnyiapeilrge--------------------------eygfsvdwwalgvlmfemma-grspfd  452 (593)
T KOG0695|consen  409 ---STFCGTPNYIAPEILRGE--------------------------EYGFSVDWWALGVLMFEMMA-GRSPFD  452 (593)
T ss_pred             ---ccccCCCcccchhhhccc--------------------------ccCceehHHHHHHHHHHHHc-CCCCcc
Confidence               345688888887776543                          68999999999999999999 999996

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.66  E-value=4.5e-17  Score=158.82  Aligned_cols=55  Identities=24%  Similarity=0.301  Sum_probs=47.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++.++.   .+++..++.++.|++.||+|||+++|+||||||+||+++.+
T Consensus        81 ~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~  135 (264)
T cd06626          81 CSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHN  135 (264)
T ss_pred             CCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence            36899999998764   35788999999999999999999999999999999555443

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.66  E-value=3e-17  Score=159.79  Aligned_cols=162  Identities=19%  Similarity=0.297  Sum_probs=114.0

Q ss_pred             CCCCcHHHHHHhcCC-CCCCchhHHHHHHHHHHHHHHHHH-----hcceeccccCcccccccCccccccccCCccCCCce
Q psy17476          1 MRHGSLLNYLRRHEN-TLGGNVGLLLDMCIQVCKGMAYLE-----RHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKV   74 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~gl~ylH-----~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~   74 (513)
                      +++|+|.+++.+... ...+++..++.++.|++.||+|||     +.+|+||||||+||+++.++           ..++
T Consensus        83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~-----------~~kl  151 (265)
T cd08217          83 CEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANN-----------NVKL  151 (265)
T ss_pred             ccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCC-----------CEEE
Confidence            367899999987421 224788999999999999999999     88999999999996655443           3344


Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEee
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMD  154 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  154 (513)
                                  .||+++....                                                          
T Consensus       152 ------------~d~g~~~~~~----------------------------------------------------------  161 (265)
T cd08217         152 ------------GDFGLAKILG----------------------------------------------------------  161 (265)
T ss_pred             ------------eccccccccc----------------------------------------------------------
Confidence                        6777655100                                                          


Q ss_pred             cCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCC
Q psy17476        155 DTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYG  234 (513)
Q Consensus       155 ~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~  234 (513)
                      ....   ......++..|+|||                          ++....++.++|+||||+++|+|++ |..||.
T Consensus       162 ~~~~---~~~~~~~~~~~~~pE--------------------------~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~  211 (265)
T cd08217         162 HDSS---FAKTYVGTPYYMSPE--------------------------QLNHMSYDEKSDIWSLGCLIYELCA-LSPPFT  211 (265)
T ss_pred             CCcc---cccccccCCCccChh--------------------------hhcCCCCCchhHHHHHHHHHHHHHH-CCCccc
Confidence            0000   000112444455554                          4444567889999999999999999 999998


Q ss_pred             CCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        235 RLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+..++.+.+..+.....+            +||...+..||++++++.+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         212 ARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             CcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            87766666666555443333            5788888899999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.66  E-value=1.7e-17  Score=164.00  Aligned_cols=57  Identities=16%  Similarity=0.164  Sum_probs=47.5

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++.+......+++..++.++.|++.||+|||+++|+||||||+||+++.++
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~  138 (285)
T cd07861          82 SMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKG  138 (285)
T ss_pred             CCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCC
Confidence            378999988754333578999999999999999999999999999999996655443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.66  E-value=2.4e-17  Score=164.61  Aligned_cols=54  Identities=22%  Similarity=0.283  Sum_probs=46.3

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      .|+|.+++.+....  +++..++.++.|++.||+|||+++|+||||||+||+++.+
T Consensus        87 ~~~l~~~l~~~~~~--~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~  140 (301)
T cd07873          87 DKDLKQYLDDCGNS--INMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINER  140 (301)
T ss_pred             ccCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCC
Confidence            37899999876543  5788999999999999999999999999999999665544

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.66  E-value=3.6e-17  Score=159.25  Aligned_cols=167  Identities=20%  Similarity=0.239  Sum_probs=108.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++++||||+|+||+++.++           ..++      
T Consensus        75 ~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~-----------~~~l------  134 (265)
T cd05579          75 LPGGDLASLLENVG---SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNG-----------HLKL------  134 (265)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCC-----------CEEE------
Confidence            46889999998865   468889999999999999999999999999999996655543           2233      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++......                                         .......+.            
T Consensus       135 ------~dfg~~~~~~~~-----------------------------------------~~~~~~~~~------------  155 (265)
T cd05579         135 ------TDFGLSKVGLVR-----------------------------------------RQINLNDDE------------  155 (265)
T ss_pred             ------EecccchhcccC-----------------------------------------ccccccccc------------
Confidence                  566665411000                                         000000000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......++..                          +++||++....++.++|+||+|+++||+++ |..||......+
T Consensus       156 ~~~~~~~~~~~--------------------------~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~-g~~p~~~~~~~~  208 (265)
T cd05579         156 KEDKRIVGTPD--------------------------YIAPEVILGQGHSKTVDWWSLGCILYEFLV-GIPPFHGETPEE  208 (265)
T ss_pred             ccccCcccCcc--------------------------ccCHHHhcCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence            00000112233                          344555555567889999999999999999 999998777766


Q ss_pred             eccccccccccCCC-------------CCcCCCCCCHHHH---HHHHcC
Q psy17476        241 VVDRVQRGIILEKP-------------KAWYVGDMSRQRA---ESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-------------~~w~~~~~~R~~a---eeLL~~  273 (513)
                      ....+..+....+.             +||...+..||++   .++|.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~  257 (265)
T cd05579         209 IFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH  257 (265)
T ss_pred             HHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence            66555432221111             3566667777766   666654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.66  E-value=4e-17  Score=180.51  Aligned_cols=59  Identities=19%  Similarity=0.291  Sum_probs=46.9

Q ss_pred             CCCCcHHHHHHhcCC--------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHEN--------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~--------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      ++||+|.+++.+...        ....++..+..++.||+.||+|||++||+||||||+||+++.++
T Consensus        84 ~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg  150 (932)
T PRK13184         84 IEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFG  150 (932)
T ss_pred             CCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCC
Confidence            478999999986321        11245667889999999999999999999999999996665544

>KOG0665|consensus

Probab=99.66  E-value=2.7e-17  Score=156.78  Aligned_cols=127  Identities=16%  Similarity=0.187  Sum_probs=96.0

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .++|.+++.-     .++..++..+..|+++|+.|||+.||+||||||+||++..+++           .||        
T Consensus       104 ~~nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~-----------lKi--------  159 (369)
T KOG0665|consen  104 DANLCQVILM-----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCT-----------LKI--------  159 (369)
T ss_pred             hhHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhh-----------eee--------
Confidence            3566777662     3577899999999999999999999999999999977777653           245        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++.+..                                                                 
T Consensus       160 ----~dfg~ar~e~~-----------------------------------------------------------------  170 (369)
T KOG0665|consen  160 ----LDFGLARTEDT-----------------------------------------------------------------  170 (369)
T ss_pred             ----ccchhhcccCc-----------------------------------------------------------------
Confidence                78888773211                                                                 


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                             .-.+.|-.+.                -.+.|||++...+|...+||||+||++.||++ |...|.+.+..+.+
T Consensus       171 -------~~~mtpyVvt----------------Ryyrapevil~~~~ke~vdiwSvGci~gEli~-~~Vlf~g~d~idQ~  226 (369)
T KOG0665|consen  171 -------DFMMTPYVVT----------------RYYRAPEVILGMGYKENVDIWSVGCIMGELIL-GTVLFPGKDHIDQW  226 (369)
T ss_pred             -------ccccCchhhe----------------eeccCchheeccCCcccchhhhhhhHHHHHhh-ceEEecCchHHHHH
Confidence                   1112222211                12357888999999999999999999999999 99999988776666


Q ss_pred             cccc
Q psy17476        243 DRVQ  246 (513)
Q Consensus       243 ~~i~  246 (513)
                      .++.
T Consensus       227 ~ki~  230 (369)
T KOG0665|consen  227 NKII  230 (369)
T ss_pred             HHHH
Confidence            5554

>KOG0586|consensus

Probab=99.66  E-value=1.1e-16  Score=164.68  Aligned_cols=139  Identities=22%  Similarity=0.412  Sum_probs=107.0

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .+|.|++||.+++..   .+..++.++.|++.|++|||+++|||||||++|           +|+|.++..||       
T Consensus       138 ~~ge~~~yl~~~gr~---~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eN-----------ilL~~~mnikI-------  196 (596)
T KOG0586|consen  138 SGGELFDYLVKHGRM---KEKEARAKFRQIVSAVEYCHSKNIVHRDLKAEN-----------ILLDENMNIKI-------  196 (596)
T ss_pred             cCchhHHHHHhcccc---hhhhhhhhhHHHHHHHHHHhhcceeccccchhh-----------cccccccceee-------
Confidence            479999999998864   568999999999999999999999999999999           66666666677       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           +||+++.                                                 .|..|..            
T Consensus       197 -----aDfgfS~-------------------------------------------------~~~~~~~------------  210 (596)
T KOG0586|consen  197 -----ADFGFST-------------------------------------------------FFDYGLM------------  210 (596)
T ss_pred             -----eccccce-------------------------------------------------eeccccc------------
Confidence                 7888765                                                 0111111            


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                       ....+|+..|.|||+..+.+      |.                   +..+|+||+|+++|-|+. |.+||++.+..++
T Consensus       211 -lqt~cgsppyAaPEl~~g~~------y~-------------------gpe~D~Wslgvvly~LV~-GsLPFDG~~lk~L  263 (596)
T KOG0586|consen  211 -LQTFCGSPPYAAPELFNGKK------YD-------------------GPEVDIWSLGVVLYALVE-GSLPFDGQNLKEL  263 (596)
T ss_pred             -ccccCCCCCccChHhhcCcc------cC-------------------Ccceehhhhhhhheeeee-cccccCCcccccc
Confidence             12345777777777654432      22                   788999999999999998 9999999999888


Q ss_pred             cccccc-ccccCCC
Q psy17476        242 VDRVQR-GIILEKP  254 (513)
Q Consensus       242 ~~~i~~-~~~~~~p  254 (513)
                      ..++.. ..+.+..
T Consensus       264 r~rvl~gk~rIp~~  277 (596)
T KOG0586|consen  264 RPRVLRGKYRIPFY  277 (596)
T ss_pred             cchheeeeecccce
Confidence            877754 3555544

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.66  E-value=5.1e-17  Score=157.77  Aligned_cols=158  Identities=23%  Similarity=0.323  Sum_probs=107.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++++|.+++.++.   .+++..+..++.|++.||+|||+.+|+||||||+||+++.+           ...++      
T Consensus        84 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~-----------~~~kl------  143 (258)
T cd06632          84 VPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTN-----------GVVKL------  143 (258)
T ss_pred             cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC-----------CCEEE------
Confidence            36899999998764   35888999999999999999999999999999999555443           23444      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++.-.                                                          ....   
T Consensus       144 ------~d~~~~~~~----------------------------------------------------------~~~~---  156 (258)
T cd06632         144 ------ADFGMAKQV----------------------------------------------------------VEFS---  156 (258)
T ss_pred             ------ccCccceec----------------------------------------------------------cccc---
Confidence                  677665400                                                          0000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccccc-ccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTR-FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                       ......|+..|++|                          |.+.... ++.++|+||+||++|++++ |..||......
T Consensus       157 -~~~~~~~~~~y~~p--------------------------e~~~~~~~~~~~~D~~slG~~l~~l~~-g~~pf~~~~~~  208 (258)
T cd06632         157 -FAKSFKGSPYWMAP--------------------------EVIAQQGGYGLAADIWSLGCTVLEMAT-GKPPWSQLEGV  208 (258)
T ss_pred             -cccccCCCcceeCH--------------------------HHhcCCCCCCchhhhHHHHHHHHHHHh-CCCCcccCcHH
Confidence             00011234444444                          4444444 7899999999999999999 99999766543


Q ss_pred             eecccccc-ccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQR-GIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~-~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +....+.. ...+..+            +||..++..|+.+.+++.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         209 AAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             HHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence            33333322 1121111            4677788888888888765

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.66  E-value=6.8e-17  Score=158.04  Aligned_cols=54  Identities=22%  Similarity=0.361  Sum_probs=47.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccC
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSL   57 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~   57 (513)
                      +++|+|.+++.+..   ++++..+..++.|++.||+|||+++++||||||+||+++.
T Consensus        85 ~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~  138 (268)
T cd06630          85 MAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDS  138 (268)
T ss_pred             cCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence            46799999998754   4688899999999999999999999999999999965543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG1989|consensus

Probab=99.66  E-value=2.7e-17  Score=175.60  Aligned_cols=57  Identities=23%  Similarity=0.324  Sum_probs=50.8

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcc--eeccccCcccccccCcc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHN--YIHRETKKSLYPSSLNE   59 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~--iiHrdikp~N~~~~~~~   59 (513)
                      +||+|.|||...... .|++.++++|+.|+|.|+++||...  |||||||-|||||+.++
T Consensus       125 ~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g  183 (738)
T KOG1989|consen  125 KGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADG  183 (738)
T ss_pred             cCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCC
Confidence            469999999986554 3799999999999999999999997  99999999997777776

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.65  E-value=2.2e-17  Score=163.16  Aligned_cols=54  Identities=22%  Similarity=0.343  Sum_probs=46.2

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      .|+|.+++.+....  +++..++.++.||++||.|||+++|+||||||+||+++.+
T Consensus        82 ~~~l~~~~~~~~~~--~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~  135 (284)
T cd07839          82 DQDLKKYFDSCNGD--IDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKN  135 (284)
T ss_pred             CCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCC
Confidence            47899988875433  6899999999999999999999999999999999655544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG1006|consensus

Probab=99.65  E-value=1.6e-17  Score=154.48  Aligned_cols=42  Identities=19%  Similarity=0.240  Sum_probs=35.4

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHhc-ceeccccCcccccccCcc
Q psy17476         18 GGNVGLLLDMCIQVCKGMAYLERH-NYIHRETKKSLYPSSLNE   59 (513)
Q Consensus        18 ~~~~~~~~~~~~qi~~gl~ylH~~-~iiHrdikp~N~~~~~~~   59 (513)
                      -+++..+-.|..-++.||+||-+. .|||||+||+|||++..|
T Consensus       163 ~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G  205 (361)
T KOG1006|consen  163 RIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHG  205 (361)
T ss_pred             cCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCC
Confidence            368889999999999999999975 799999999995554444

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.65  E-value=3.8e-17  Score=161.05  Aligned_cols=51  Identities=14%  Similarity=0.133  Sum_probs=44.3

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPS   55 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~   55 (513)
                      .|+|.+++.....  .+++..++.++.|++.||+|||+++|+||||||+||++
T Consensus        83 ~~~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l  133 (282)
T cd07831          83 DMNLYELIKGRKR--PLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI  133 (282)
T ss_pred             CccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE
Confidence            4789999887543  36899999999999999999999999999999999443

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.65  E-value=4e-17  Score=157.27  Aligned_cols=56  Identities=9%  Similarity=0.043  Sum_probs=48.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+..   ++++..+..++.|++.||+|||+++|+||||||+||+++.++
T Consensus        67 ~~~~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~  122 (237)
T cd05576          67 AEGGKLWSHISKFL---NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRG  122 (237)
T ss_pred             CCCCCHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC
Confidence            46899999998764   368899999999999999999999999999999996555543

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.65  E-value=7.5e-17  Score=156.20  Aligned_cols=162  Identities=22%  Similarity=0.321  Sum_probs=112.8

Q ss_pred             CCCCcHHHHHHhcC-CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHE-NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++++|.+++.+.. ....+++..+..++.|++.||+|||+++++|+||+|+||+++.++           ..++     
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~-----------~~~l-----  144 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG-----------LVKL-----  144 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCC-----------cEEE-----
Confidence            35789999998853 112478999999999999999999999999999999996665543           2233     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .||+++...                                                          ....  
T Consensus       145 -------~d~~~~~~~----------------------------------------------------------~~~~--  157 (258)
T cd08215         145 -------GDFGISKVL----------------------------------------------------------SSTV--  157 (258)
T ss_pred             -------CCccceeec----------------------------------------------------------ccCc--
Confidence                   566654300                                                          0000  


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                       .......|+..|                          ++||.+....++.++|+||+|+++|+|++ |..||...+..
T Consensus       158 -~~~~~~~~~~~y--------------------------~~pe~~~~~~~~~~~Dv~slG~~~~~l~~-g~~p~~~~~~~  209 (258)
T cd08215         158 -DLAKTVVGTPYY--------------------------LSPELCQNKPYNYKSDIWSLGCVLYELCT-LKHPFEGENLL  209 (258)
T ss_pred             -ceecceeeeecc--------------------------cChhHhccCCCCccccHHHHHHHHHHHHc-CCCCCCCCcHH
Confidence             000001133334                          44555555677899999999999999998 99999877766


Q ss_pred             eeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++...+.+....+.|            .||...+..|+++.++|.+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         210 ELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            666555444333333            4788889999999998865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.65  E-value=4.1e-17  Score=166.18  Aligned_cols=51  Identities=20%  Similarity=0.189  Sum_probs=43.3

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccC
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSL   57 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~   57 (513)
                      .++|.+++.++    .+++..++.++.|+++||.|||++||+||||||+||+++.
T Consensus        99 ~~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~  149 (342)
T cd07854          99 ETDLANVLEQG----PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT  149 (342)
T ss_pred             cccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC
Confidence            36788887653    3578899999999999999999999999999999965543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.65  E-value=7.9e-17  Score=159.41  Aligned_cols=157  Identities=20%  Similarity=0.318  Sum_probs=107.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh-cceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER-HNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~-~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.+++.+.+   ++++..++.++.|++.||.|||+ ++++||||||+||+++.++           ..++     
T Consensus        85 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~-----------~~~l-----  145 (284)
T cd06620          85 MDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG-----------QIKL-----  145 (284)
T ss_pred             CCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC-----------cEEE-----
Confidence            46899999988754   46888999999999999999997 6899999999996655543           2344     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||++....                                                         . .   
T Consensus       146 -------~d~gl~~~~~---------------------------------------------------------~-~---  157 (284)
T cd06620         146 -------CDFGVSGELI---------------------------------------------------------N-S---  157 (284)
T ss_pred             -------ccCCcccchh---------------------------------------------------------h-h---
Confidence                   6777654100                                                         0 0   


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                        ......|+..|                          ++||++....++.++|+||+||++|++++ |..||......
T Consensus       158 --~~~~~~~~~~~--------------------------~aPE~~~~~~~~~~~Di~slG~~l~~l~t-g~~p~~~~~~~  208 (284)
T cd06620         158 --IADTFVGTSTY--------------------------MSPERIQGGKYTVKSDVWSLGISIIELAL-GKFPFAFSNID  208 (284)
T ss_pred             --ccCccccCccc--------------------------CCHHHHccCCCCccchHHHHHHHHHHHHh-CCCCCcccchh
Confidence              00001133344                          45555555677899999999999999999 99999755432


Q ss_pred             -----------eeccccccccccC-----CC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 -----------EVVDRVQRGIILE-----KP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 -----------~~~~~i~~~~~~~-----~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                                 +....+.....+.     .+        +||..++..||++.+++.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~  266 (284)
T cd06620         209 DDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM  266 (284)
T ss_pred             hhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence                       1112221111111     11        5788889999999998875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.65  E-value=5.1e-17  Score=160.49  Aligned_cols=56  Identities=20%  Similarity=0.241  Sum_probs=45.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      |++++|..++.+..   .+++..++.++.|++.||+|||+++|+||||||+||+++.++
T Consensus        82 ~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~  137 (286)
T cd07847          82 CDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG  137 (286)
T ss_pred             cCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC
Confidence            45667776665433   368999999999999999999999999999999996655443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.64  E-value=8.5e-17  Score=160.15  Aligned_cols=164  Identities=26%  Similarity=0.466  Sum_probs=106.9

Q ss_pred             CCCCcHHHHHHhcCC---------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCC
Q psy17476          1 MRHGSLLNYLRRHEN---------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIR   71 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~---------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~   71 (513)
                      +++|+|.+++.....         ...+++..+..++.|++.||+|||+++++||||||+||+++.++           .
T Consensus        99 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~-----------~  167 (295)
T cd05097          99 MENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHY-----------T  167 (295)
T ss_pred             CCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCC-----------c
Confidence            468999999976421         11357889999999999999999999999999999996554432           3


Q ss_pred             CceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEE
Q psy17476         72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYE  151 (513)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  151 (513)
                      .++            .|||++....                                                 .+....
T Consensus       168 ~kl------------~dfg~~~~~~-------------------------------------------------~~~~~~  186 (295)
T cd05097         168 IKI------------ADFGMSRNLY-------------------------------------------------SGDYYR  186 (295)
T ss_pred             EEe------------cccccccccc-------------------------------------------------cCccee
Confidence            344            7777765100                                                 000000


Q ss_pred             EeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee-cCC
Q psy17476        152 VMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT-CGK  230 (513)
Q Consensus       152 ~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t-~g~  230 (513)
                                ......++.                          .+++||++....++.++|+|||||++|||++ ++.
T Consensus       187 ----------~~~~~~~~~--------------------------~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~  230 (295)
T cd05097         187 ----------IQGRAVLPI--------------------------RWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKE  230 (295)
T ss_pred             ----------ccCcCcCce--------------------------eecChhhhccCCcCchhhHHHHHHHHHHHHHcCCC
Confidence                      000001122                          3455666666678999999999999999986 366


Q ss_pred             CCCCCCCcceecccccc-----cc------ccCCC--------CCcCCCCCCHHHHHHHHc
Q psy17476        231 MPYGRLKNTEVVDRVQR-----GI------ILEKP--------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       231 ~pf~~~~~~~~~~~i~~-----~~------~~~~p--------~~w~~~~~~R~~aeeLL~  272 (513)
                      .||...+..+++..+.+     +.      ....|        +||..++..||++.+++.
T Consensus       231 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         231 QPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             CCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            78876665554433211     00      00111        588888889998888764

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.64  E-value=9.4e-17  Score=160.84  Aligned_cols=157  Identities=18%  Similarity=0.239  Sum_probs=109.3

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .|+|.+++..+..  ++++..+..++.|++.||.|||+.+|+||||+|+||+++.++           ..++        
T Consensus        98 ~g~l~~~~~~~~~--~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~-----------~~kL--------  156 (307)
T cd06607          98 LGSASDILEVHKK--PLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPG-----------TVKL--------  156 (307)
T ss_pred             CCCHHHHHHHccc--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCC-----------CEEE--------
Confidence            4788888876554  368899999999999999999999999999999996555443           2344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .||+++...                                                          ..       
T Consensus       157 ----~dfg~~~~~----------------------------------------------------------~~-------  167 (307)
T cd06607         157 ----ADFGSASLV----------------------------------------------------------SP-------  167 (307)
T ss_pred             ----eecCcceec----------------------------------------------------------CC-------
Confidence                677765410                                                          00       


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .....++..|+|||.+...                       ....++.++|+||||+++|||+| |..||...+.....
T Consensus       168 ~~~~~~~~~y~aPE~~~~~-----------------------~~~~~~~~sDv~s~G~il~el~t-g~~p~~~~~~~~~~  223 (307)
T cd06607         168 ANSFVGTPYWMAPEVILAM-----------------------DEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSAL  223 (307)
T ss_pred             CCCccCCccccCceeeecc-----------------------CCCCCCcccchHHHHHHHHHHHc-CCCCCCCccHHHHH
Confidence            0011255567777765321                       12357889999999999999999 99999766554433


Q ss_pred             cccccccccCC-------------CCCcCCCCCCHHHHHHHHcC
Q psy17476        243 DRVQRGIILEK-------------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       243 ~~i~~~~~~~~-------------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+.....+..             .+||..++..||++.+++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         224 YHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             HHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            33322211111             15788999999999999875

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG1027|consensus

Probab=99.64  E-value=1.3e-16  Score=168.54  Aligned_cols=167  Identities=20%  Similarity=0.325  Sum_probs=106.8

Q ss_pred             CcHHHHHHhcCCCCCCch-hHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          4 GSLLNYLRRHENTLGGNV-GLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         4 g~L~~~l~~~~~~~~~~~-~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      -+|.+++..+........ -..+..+.|+++||++||+.+||||||||.||||+.+.      .+...+++|        
T Consensus       587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~------~~~~~ra~i--------  652 (903)
T KOG1027|consen  587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPS------ADGTLRAKI--------  652 (903)
T ss_pred             hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccC------CCcceeEEe--------
Confidence            478899988521111111 24578999999999999999999999999998877742      123356666        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          +|||++|.                                     +++     +.-+|+                .
T Consensus       653 ----SDfglsKk-------------------------------------l~~-----~~sS~~----------------r  670 (903)
T KOG1027|consen  653 ----SDFGLSKK-------------------------------------LAG-----GKSSFS----------------R  670 (903)
T ss_pred             ----cccccccc-------------------------------------cCC-----Ccchhh----------------c
Confidence                89999881                                     000     111111                1


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .....|+.||++||.+...                          .-+.++||+|+||++|..++.|..||...-..+. 
T Consensus       671 ~s~~sGt~GW~APE~L~~~--------------------------~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~-  723 (903)
T KOG1027|consen  671 LSGGSGTSGWQAPEQLRED--------------------------RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA-  723 (903)
T ss_pred             ccCCCCcccccCHHHHhcc--------------------------ccCcccchhhcCceEEEEecCCccCCCchHHhhh-
Confidence            1223478888887776543                          3366899999999999999988999964432211 


Q ss_pred             cccccccc---c-CCC---------CCcCCCCCCHHHHHHHHcC
Q psy17476        243 DRVQRGII---L-EKP---------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       243 ~~i~~~~~---~-~~p---------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.+...+.   + +.+         +-...++..||.|.++|.+
T Consensus       724 NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  724 NILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNH  767 (903)
T ss_pred             hhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCC
Confidence            01110000   0 011         2256777888888888876

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.64  E-value=9.6e-17  Score=158.52  Aligned_cols=55  Identities=22%  Similarity=0.365  Sum_probs=46.5

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|.+++.+.... .+++..++.++.|++.||.|||+++++|+||||+||+++.+
T Consensus        89 ~~~l~~~l~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~  143 (287)
T cd07838          89 DQDLATYLSKCPKP-GLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSD  143 (287)
T ss_pred             ccCHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccC
Confidence            36899998875432 46899999999999999999999999999999999555544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.64  E-value=8.2e-17  Score=159.71  Aligned_cols=56  Identities=16%  Similarity=0.089  Sum_probs=48.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++....   ++++..+..++.|++.||.|||+++++||||||+||+++.++
T Consensus        87 ~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~  142 (290)
T cd05613          87 INGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG  142 (290)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCC
Confidence            57899999998764   468889999999999999999999999999999996655443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG4236|consensus

Probab=99.64  E-value=5.4e-16  Score=155.92  Aligned_cols=147  Identities=21%  Similarity=0.408  Sum_probs=108.1

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +||....|-...+. -+++...+.+..||+.||.|||-++|+|.||||+|          |||.+..--+.+++      
T Consensus       646 ~GDMLEMILSsEkg-RL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPEN----------VLLas~~~FPQvKl------  708 (888)
T KOG4236|consen  646 HGDMLEMILSSEKG-RLPERITKFLVTQILVALRYLHFKNIVHCDLKPEN----------VLLASASPFPQVKL------  708 (888)
T ss_pred             cchHHHHHHHhhcc-cchHHHHHHHHHHHHHHHHHhhhcceeeccCCchh----------eeeccCCCCCceee------
Confidence            68888877775543 37999999999999999999999999999999999          45554433333322      


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          +|||+++  .                                          .++-+|+                 
T Consensus       709 ----CDFGfAR--i------------------------------------------IgEksFR-----------------  723 (888)
T KOG4236|consen  709 ----CDFGFAR--I------------------------------------------IGEKSFR-----------------  723 (888)
T ss_pred             ----cccccee--e------------------------------------------cchhhhh-----------------
Confidence                7777776  0                                          0111111                 


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                       ++                          |-|+|-+.|||++.++.|+..-|+||.|+++|--++ |..||..  .++|-
T Consensus       724 -rs--------------------------VVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLS-GTFPFNE--dEdIn  773 (888)
T KOG4236|consen  724 -RS--------------------------VVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLS-GTFPFNE--DEDIN  773 (888)
T ss_pred             -hh--------------------------hcCCccccCHHHHhhccccccccceeeeEEEEEEec-ccccCCC--ccchh
Confidence             11                          224555556777888899999999999999999999 9999854  45677


Q ss_pred             cccccccccCCCCCcCCCC
Q psy17476        243 DRVQRGIILEKPKAWYVGD  261 (513)
Q Consensus       243 ~~i~~~~~~~~p~~w~~~~  261 (513)
                      +.|++..-.-+|.+|..-.
T Consensus       774 dQIQNAaFMyPp~PW~eis  792 (888)
T KOG4236|consen  774 DQIQNAAFMYPPNPWSEIS  792 (888)
T ss_pred             HHhhccccccCCCchhhcC
Confidence            8888887777888897643

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.64  E-value=6.2e-17  Score=159.81  Aligned_cols=153  Identities=20%  Similarity=0.322  Sum_probs=101.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|..+.       .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        81 ~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~-----------~~~l------  136 (279)
T cd06619          81 MDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRG-----------QVKL------  136 (279)
T ss_pred             CCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCC-----------CEEE------
Confidence            3677776542       247788999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                         ...    
T Consensus       137 ------~dfg~~~~~~---------------------------------------------------------~~~----  149 (279)
T cd06619         137 ------CDFGVSTQLV---------------------------------------------------------NSI----  149 (279)
T ss_pred             ------eeCCcceecc---------------------------------------------------------ccc----
Confidence                  7787765100                                                         000    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc-
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT-  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~-  239 (513)
                        .....|+..|+|||+                          +....++.++|+||+||++|+|++ |..||...... 
T Consensus       150 --~~~~~~~~~y~aPE~--------------------------~~~~~~~~~~DvwslG~~l~~l~~-g~~pf~~~~~~~  200 (279)
T cd06619         150 --AKTYVGTNAYMAPER--------------------------ISGEQYGIHSDVWSLGISFMELAL-GRFPYPQIQKNQ  200 (279)
T ss_pred             --ccCCCCChhhcCcee--------------------------ecCCCCCCcchHHHHHHHHHHHHh-CCCCchhhcccc
Confidence              001124445555554                          444567899999999999999999 99999653321 


Q ss_pred             ------eeccccccccccC--CC-----------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 ------EVVDRVQRGIILE--KP-----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ------~~~~~i~~~~~~~--~p-----------~~w~~~~~~R~~aeeLL~~  273 (513)
                            +....+.......  .+           +||..++..|+++++++.+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         201 GSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             cccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence                  1111111111111  10           5788888899999988875

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.64  E-value=1.2e-16  Score=155.68  Aligned_cols=56  Identities=16%  Similarity=0.112  Sum_probs=48.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+..   ++++..+..++.|+++||.|||+++++|+||||+||+++.++
T Consensus        82 ~~~~~L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~  137 (258)
T cd05578          82 LLGGDLRYHLSQKV---KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQG  137 (258)
T ss_pred             CCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCC
Confidence            46899999998863   468899999999999999999999999999999996665543

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.64  E-value=1e-16  Score=157.30  Aligned_cols=55  Identities=25%  Similarity=0.274  Sum_probs=47.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||.|||+++++||||||+||+++.+
T Consensus        90 ~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~  144 (272)
T cd06629          90 VPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDAD  144 (272)
T ss_pred             CCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCC
Confidence            36899999998874   46888999999999999999999999999999999655444

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0669|consensus

Probab=99.64  E-value=4.7e-17  Score=150.16  Aligned_cols=146  Identities=16%  Similarity=0.278  Sum_probs=105.3

Q ss_pred             cHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccccc
Q psy17476          5 SLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAI   84 (513)
Q Consensus         5 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   84 (513)
                      ||...|.....+  ++...++.+++++..||.|+|+..|+|||+||+|+||+.+|+   |        ++          
T Consensus       109 DLaGlLsn~~vr--~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgi---l--------kl----------  165 (376)
T KOG0669|consen  109 DLAGLLSNRKVR--FSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGI---L--------KL----------  165 (376)
T ss_pred             hHHHHhcCcccc--ccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCce---E--------Ee----------
Confidence            666766665444  477799999999999999999999999999999999999985   2        33          


Q ss_pred             CCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeee
Q psy17476         85 EGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK  164 (513)
Q Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  164 (513)
                        +|||+++--.                                                       .-+......+  .
T Consensus       166 --ADFGlar~fs-------------------------------------------------------~~~n~~kpry--t  186 (376)
T KOG0669|consen  166 --ADFGLARAFS-------------------------------------------------------TSKNVVKPRY--T  186 (376)
T ss_pred             --ecccccccee-------------------------------------------------------cccccCCCCc--c
Confidence              7888876100                                                       0000000000  1


Q ss_pred             cCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceeccc
Q psy17476        165 DKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDR  244 (513)
Q Consensus       165 ~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~  244 (513)
                      ++.-|..|.|||.+                         ++++.|+.+.|+|+.||++.||.| +.+-+++....+.+..
T Consensus       187 nrvvTLwYrppEll-------------------------LG~r~yg~~iDiWgAgCimaeMwt-rspimqgnteqqql~~  240 (376)
T KOG0669|consen  187 NRVVTLWYRPPELL-------------------------LGDREYGPPIDIWGAGCIMAEMWT-RSPIMQGNTEQQQLHL  240 (376)
T ss_pred             cceeeeecCCHHHh-------------------------hcccccCCcchhHhHHHHHHHHHc-cCccccCChHHHHHHH
Confidence            12234456666654                         456789999999999999999999 9999999888888887


Q ss_pred             cccccccCCCCCcC
Q psy17476        245 VQRGIILEKPKAWY  258 (513)
Q Consensus       245 i~~~~~~~~p~~w~  258 (513)
                      |..-.....++-|+
T Consensus       241 Is~LcGs~tkevWP  254 (376)
T KOG0669|consen  241 ISQLCGSITKEVWP  254 (376)
T ss_pred             HHHHhccCCcccCC
Confidence            77555555555564

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.64  E-value=7.5e-17  Score=159.33  Aligned_cols=55  Identities=20%  Similarity=0.336  Sum_probs=46.2

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      .++|.+++...... .+++..+..++.|++.||+|||+++++||||+|+||+++.+
T Consensus        82 ~~~l~~~~~~~~~~-~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~  136 (284)
T cd07860          82 HQDLKKFMDASPLS-GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE  136 (284)
T ss_pred             ccCHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence            36888888775433 47889999999999999999999999999999999655444

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.64  E-value=1.1e-16  Score=157.89  Aligned_cols=57  Identities=16%  Similarity=0.095  Sum_probs=49.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++.+.... .+++..+..++.|++.||.|||+++++||||||+||+++.+
T Consensus        75 ~~~~~L~~~l~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~  131 (277)
T cd05577          75 MNGGDLKYHIYNVGEP-GFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDH  131 (277)
T ss_pred             CCCCcHHHHHHHcCcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC
Confidence            4689999999886543 46889999999999999999999999999999999655544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.64  E-value=7.2e-17  Score=157.61  Aligned_cols=158  Identities=23%  Similarity=0.322  Sum_probs=107.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh-cceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER-HNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~-~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++++|.+++.+...  .+++..+..++.|++.||+|||+ .+++||||||+||+++.++           ..++     
T Consensus        81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~-----------~~~l-----  142 (265)
T cd06605          81 MDGGSLDKILKEVQG--RIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG-----------QIKL-----  142 (265)
T ss_pred             cCCCcHHHHHHHccC--CCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC-----------CEEE-----
Confidence            357899999988643  46888999999999999999999 9999999999996555443           3344     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||++....                                                         ...   
T Consensus       143 -------~d~g~~~~~~---------------------------------------------------------~~~---  155 (265)
T cd06605         143 -------CDFGVSGQLV---------------------------------------------------------NSL---  155 (265)
T ss_pred             -------eecccchhhH---------------------------------------------------------HHH---
Confidence                   6666553100                                                         000   


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC--
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK--  237 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~--  237 (513)
                         .....++..                          +++||++....++.++|+||+|+++|+|++ |..||...+  
T Consensus       156 ---~~~~~~~~~--------------------------y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~-g~~p~~~~~~~  205 (265)
T cd06605         156 ---AKTFVGTSS--------------------------YMAPERIQGNDYSVKSDIWSLGLSLIELAT-GRFPYPPENDP  205 (265)
T ss_pred             ---hhcccCChh--------------------------ccCHHHHcCCCCCchhhHHHHHHHHHHHHh-CCCCCCccccc
Confidence               000113333                          445555556678999999999999999999 999996542  


Q ss_pred             ---cceeccccccccccCCC-------------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 ---NTEVVDRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ---~~~~~~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~  273 (513)
                         ..+....+.....+..+             .||..++..|+++.+++.+
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         206 PDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             cccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence               11222222222221111             4788899999999999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.64  E-value=8.3e-17  Score=159.00  Aligned_cols=54  Identities=22%  Similarity=0.247  Sum_probs=47.4

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +|+|.+++.....  ++++..++.++.||+.||+|||+++++|+||||+||+++.+
T Consensus        82 ~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~  135 (286)
T cd07832          82 PSDLSEVLRDEER--PLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISAD  135 (286)
T ss_pred             CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCC
Confidence            7899999987653  46899999999999999999999999999999999655544

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.64  E-value=1.1e-16  Score=155.18  Aligned_cols=160  Identities=24%  Similarity=0.333  Sum_probs=112.0

Q ss_pred             CCCCcHHHHHHhcCC-CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHEN-TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++++|.+++.+... ...+++..+..++.|++.||+|||+++++||||+|+||+++.++           ..++     
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~-----------~~kl-----  144 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAND-----------LVKI-----  144 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCC-----------cEEE-----
Confidence            368899999987321 12468889999999999999999999999999999996554432           2233     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .||+++.-..-                                                          .   
T Consensus       145 -------~d~g~~~~~~~----------------------------------------------------------~---  156 (256)
T cd08530         145 -------GDLGISKVLKK----------------------------------------------------------N---  156 (256)
T ss_pred             -------eeccchhhhcc----------------------------------------------------------C---
Confidence                   56665541000                                                          0   


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                        ......++..|+|||                          .+....++.++|+||+|+++||+++ |..||...+..
T Consensus       157 --~~~~~~~~~~~~~Pe--------------------------~~~~~~~~~~~D~~slG~~~~~l~~-g~~p~~~~~~~  207 (256)
T cd08530         157 --MAKTQIGTPHYMAPE--------------------------VWKGRPYSYKSDIWSLGCLLYEMAT-FAPPFEARSMQ  207 (256)
T ss_pred             --CcccccCCccccCHH--------------------------HHCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHH
Confidence              000011344455554                          4445567889999999999999999 99999887776


Q ss_pred             eeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++...+..+..++.+            .||...+..||++++++.+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         208 DLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             HHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            666555544433332            5777888899999888875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0596|consensus

Probab=99.64  E-value=5.3e-17  Score=164.41  Aligned_cols=168  Identities=18%  Similarity=0.298  Sum_probs=107.9

Q ss_pred             cHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccccc
Q psy17476          5 SLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAI   84 (513)
Q Consensus         5 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   84 (513)
                      ||...|++.....  +.-.++.|.+|+++++.++|.+||||.||||.|          .||.+  .+.|+          
T Consensus       445 DL~kiL~k~~~~~--~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPAN----------FLlVk--G~LKL----------  500 (677)
T KOG0596|consen  445 DLNKILKKKKSID--PDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPAN----------FLLVK--GRLKL----------  500 (677)
T ss_pred             cHHHHHHhccCCC--chHHHHHHHHHHHHHHHHHHHhceeecCCCccc----------EEEEe--eeEEe----------
Confidence            6888888876543  222899999999999999999999999999999          33332  23344          


Q ss_pred             CCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeee
Q psy17476         85 EGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK  164 (513)
Q Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  164 (513)
                        -|||.++-                                                  -..+++.|+..+        
T Consensus       501 --IDFGIA~a--------------------------------------------------I~~DTTsI~kds--------  520 (677)
T KOG0596|consen  501 --IDFGIANA--------------------------------------------------IQPDTTSIVKDS--------  520 (677)
T ss_pred             --eeechhcc--------------------------------------------------cCccccceeecc--------
Confidence              67777661                                                  011122222222        


Q ss_pred             cCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc-ceecc
Q psy17476        165 DKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TEVVD  243 (513)
Q Consensus       165 ~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~-~~~~~  243 (513)
                       ..||..||+||.+...+.-  +....-             --..+.++||||+||++|+|+- |++||....+ ..-+.
T Consensus       521 -QvGT~NYMsPEAl~~~~s~--~~~~~~-------------k~Ki~r~SDvWSLGCILYqMvY-gktPf~~~~n~~aKl~  583 (677)
T KOG0596|consen  521 -QVGTVNYMSPEALTDMSSS--RENGKS-------------KIKISRKSDVWSLGCILYQMVY-GKTPFGQIINQIAKLH  583 (677)
T ss_pred             -ccCcccccCHHHHhhcccc--ccCCCc-------------ceeecCccchhhhhhHHHHHHh-cCCchHHHHHHHHHHH
Confidence             3488999999887655421  000000             0135789999999999999997 9999975542 11222


Q ss_pred             ccccc----cccCCC----------CCcCCCCCCHHHHHHHHcC
Q psy17476        244 RVQRG----IILEKP----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       244 ~i~~~----~~~~~p----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .|..-    ..+..|          .|.+.++..|++..++|.+
T Consensus       584 aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  584 AITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             hhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            22211    111122          3667888888888888876

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.64  E-value=4.1e-17  Score=158.63  Aligned_cols=55  Identities=25%  Similarity=0.385  Sum_probs=47.6

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      ++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+||+++.++
T Consensus        81 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~  135 (260)
T PF00069_consen   81 PGGSLQDYLQKNK---PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENG  135 (260)
T ss_dssp             TTEBHHHHHHHHS---SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTS
T ss_pred             ccccccccccccc---cccccccccccccccccccccccccccccccccccccccccc
Confidence            5679999999544   468999999999999999999999999999999997666544

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.64  E-value=7.4e-17  Score=160.27  Aligned_cols=54  Identities=17%  Similarity=0.196  Sum_probs=45.4

Q ss_pred             CcHHHHHHhcCC--CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccC
Q psy17476          4 GSLLNYLRRHEN--TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSL   57 (513)
Q Consensus         4 g~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~   57 (513)
                      |+|.+++.....  ..++++..++.++.||++||.|||+++|+||||||+||+++.
T Consensus        90 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~  145 (295)
T cd07837          90 SDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK  145 (295)
T ss_pred             cCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec
Confidence            689999876432  224789999999999999999999999999999999965544

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.64  E-value=5.4e-17  Score=161.62  Aligned_cols=55  Identities=13%  Similarity=0.150  Sum_probs=47.8

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +|+|.+++.+...  .+++..+..++.||++||+|||+++|+||||||+||+++.++
T Consensus        85 ~~~L~~~i~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~  139 (298)
T cd07841          85 ETDLEKVIKDKSI--VLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDG  139 (298)
T ss_pred             CCCHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCC
Confidence            7899999987652  368899999999999999999999999999999996665544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.63  E-value=7.5e-17  Score=163.78  Aligned_cols=52  Identities=19%  Similarity=0.286  Sum_probs=43.5

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      .++|.+++...    .+++..++.++.|++.||+|||+++|+||||||+||+++.+
T Consensus        91 ~~~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~  142 (336)
T cd07849          91 ETDLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTN  142 (336)
T ss_pred             ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC
Confidence            35777777543    36888999999999999999999999999999999655544

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG1035|consensus

Probab=99.63  E-value=6.3e-17  Score=176.77  Aligned_cols=172  Identities=19%  Similarity=0.359  Sum_probs=106.8

Q ss_pred             cHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccccc
Q psy17476          5 SLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAI   84 (513)
Q Consensus         5 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   84 (513)
                      .|+++++++...  -....++++++||++||.|+|++|||||||||.||+++.           .-..||          
T Consensus       682 ll~~iI~~N~~~--~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~-----------~~~VKI----------  738 (1351)
T KOG1035|consen  682 LLRDIIRRNHFN--SQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDS-----------RNSVKI----------  738 (1351)
T ss_pred             HHHHHHHhcccc--hhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcC-----------CCCeee----------
Confidence            456666665422  146689999999999999999999999999999954443           334566          


Q ss_pred             CCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeee
Q psy17476         85 EGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK  164 (513)
Q Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  164 (513)
                        +|||++....+ ..++.+                                ....+.+.+.|..        .  ...+
T Consensus       739 --GDFGLAt~~~~-~~~~~d--------------------------------~~~~~~~~~~g~~--------~--~~~T  773 (1351)
T KOG1035|consen  739 --GDFGLATDLKE-NLESID--------------------------------QDLSFSTNRAGSN--------D--GDLT  773 (1351)
T ss_pred             --cccccchhhhh-hhhhHh--------------------------------hccCccccccCCC--------C--cccc
Confidence              99999873110 000000                                0000000000000        0  0001


Q ss_pred             cCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccc---cccccCccccceeeeeeeeecCCCCCC-CCCcce
Q psy17476        165 DKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYT---RFSSKSDVWAYGVLMWEVFTCGKMPYG-RLKNTE  240 (513)
Q Consensus       165 ~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~Dvws~G~~l~el~t~g~~pf~-~~~~~~  240 (513)
                      ...||.-|++                          ||.+...   +|+.|+|+||+|++++||+-    ||. .+..-.
T Consensus       774 s~VGTalYvA--------------------------PEll~~~~~~~Yn~KiDmYSLGIVlFEM~y----PF~TsMERa~  823 (1351)
T KOG1035|consen  774 SQVGTALYVA--------------------------PELLSDTSSNKYNSKIDMYSLGIVLFEMLY----PFGTSMERAS  823 (1351)
T ss_pred             cccceeeeec--------------------------HHHhcccccccccchhhhHHHHHHHHHHhc----cCCchHHHHH
Confidence            1224444555                          4444443   59999999999999999985    564 444556


Q ss_pred             eccccccccccCCC-----C----------CcCCCCCCHHHHHHHHcCC
Q psy17476        241 VVDRVQRGIILEKP-----K----------AWYVGDMSRQRAESILKQE  274 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----~----------~w~~~~~~R~~aeeLL~~~  274 (513)
                      ++..++++.-+.++     +          -..+++..||+|.+||.+.
T Consensus       824 iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~  872 (1351)
T KOG1035|consen  824 ILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSE  872 (1351)
T ss_pred             HHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhcc
Confidence            67777765554442     1          1367899999999999874

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.63  E-value=1e-16  Score=160.23  Aligned_cols=55  Identities=15%  Similarity=0.222  Sum_probs=45.9

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|.+++.+...  .+++..++.++.|++.||+|||+++++||||||+||+++.++
T Consensus       102 ~~~l~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~  156 (310)
T cd07865         102 EHDLAGLLSNKNV--KFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDG  156 (310)
T ss_pred             CcCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCC
Confidence            4678888876543  368889999999999999999999999999999996655443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.63  E-value=1.6e-16  Score=156.78  Aligned_cols=163  Identities=23%  Similarity=0.342  Sum_probs=107.7

Q ss_pred             CCcHHHHHHhc-CCCCCCchhHHHHHHHHHHHHHHHHHhc-ceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          3 HGSLLNYLRRH-ENTLGGNVGLLLDMCIQVCKGMAYLERH-NYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         3 ~g~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~gl~ylH~~-~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      .|+|.+++... .....+++..+..++.|++.||+|||++ +++||||||+||+++.++           ..++      
T Consensus        83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~-----------~~kl------  145 (283)
T cd06617          83 DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG-----------QVKL------  145 (283)
T ss_pred             cccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC-----------CEEE------
Confidence            47888888763 2223478999999999999999999998 999999999996555443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                         +..    
T Consensus       146 ------~dfg~~~~~~---------------------------------------------------------~~~----  158 (283)
T cd06617         146 ------CDFGISGYLV---------------------------------------------------------DSV----  158 (283)
T ss_pred             ------eecccccccc---------------------------------------------------------ccc----
Confidence                  7777765100                                                         000    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc-c
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-T  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~-~  239 (513)
                       ......++..|+|||.+....                      ....++.++|+||+||++|||++ |..||..... .
T Consensus       159 -~~~~~~~~~~y~aPE~~~~~~----------------------~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~  214 (283)
T cd06617         159 -AKTIDAGCKPYMAPERINPEL----------------------NQKGYDVKSDVWSLGITMIELAT-GRFPYDSWKTPF  214 (283)
T ss_pred             -ccccccCCccccChhhcCCcc----------------------cccccCccccchhhHHHHHHHHh-CCCCCCccccCH
Confidence             000112555677777653211                      12457889999999999999999 9999965322 1


Q ss_pred             eeccccccccccCCC-------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.+..+.++..+..+             .||..++..|+.+.+++.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  261 (283)
T cd06617         215 QQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH  261 (283)
T ss_pred             HHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            222222222111111             4788899999999998875

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.63  E-value=1.1e-16  Score=162.54  Aligned_cols=53  Identities=19%  Similarity=0.244  Sum_probs=45.3

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +|+|.+++....   .+++..+..++.|++.||+|||+++|+||||||+||+++.+
T Consensus        91 ~~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~  143 (334)
T cd07855          91 ESDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNED  143 (334)
T ss_pred             hhhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC
Confidence            468888887654   36889999999999999999999999999999999655544

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.63  E-value=1.4e-16  Score=157.71  Aligned_cols=160  Identities=23%  Similarity=0.328  Sum_probs=109.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++++|.+++..+..  .+++..+..++.|++.||+|||++||+|+||||+||+++.++           ..++      
T Consensus        97 ~~~~~L~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~-----------~~~l------  157 (286)
T cd06614          97 MDGGSLTDIITQNFV--RMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDG-----------SVKL------  157 (286)
T ss_pred             cCCCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCC-----------CEEE------
Confidence            357999999998762  368889999999999999999999999999999996665544           2233      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++....-                                                         .. .  
T Consensus       158 ------~d~~~~~~~~~---------------------------------------------------------~~-~--  171 (286)
T cd06614         158 ------ADFGFAAQLTK---------------------------------------------------------EK-S--  171 (286)
T ss_pred             ------Cccchhhhhcc---------------------------------------------------------ch-h--
Confidence                  56655430000                                                         00 0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++.+|+||                          |.+....++.++|+||||+++|+|++ |..||...++..
T Consensus       172 -~~~~~~~~~~y~~P--------------------------E~~~~~~~~~~~Dv~slGvil~~l~~-g~~p~~~~~~~~  223 (286)
T cd06614         172 -KRNSVVGTPYWMAP--------------------------EVIKRKDYGPKVDIWSLGIMCIEMAE-GEPPYLREPPLR  223 (286)
T ss_pred             -hhccccCCcccCCH--------------------------hHhcCCCCCCccccHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence             00001133344444                          44455567899999999999999999 999998766544


Q ss_pred             eccccccccccC------CC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILE------KP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~------~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.......      .+        .||..++..|+++.+++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         224 ALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             HHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            333332221111      11        4788889999999998875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.63  E-value=7.5e-17  Score=159.26  Aligned_cols=56  Identities=18%  Similarity=0.236  Sum_probs=47.6

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      .|+|.+++..+.....+++..+..++.|++.||+|||+++|+||||||+||+++.+
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~  136 (284)
T cd07836          81 DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKR  136 (284)
T ss_pred             CccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC
Confidence            36899999886644457999999999999999999999999999999999655443

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.63  E-value=1.8e-16  Score=158.97  Aligned_cols=157  Identities=20%  Similarity=0.230  Sum_probs=108.4

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .|+|.+++.....  ++++..+..++.|++.||.|||+++++||||||+||+++.++           ..++        
T Consensus        98 ~~~l~~~~~~~~~--~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~-----------~~kl--------  156 (308)
T cd06634          98 LGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG-----------LVKL--------  156 (308)
T ss_pred             CCCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCC-----------cEEE--------
Confidence            4788888876544  368889999999999999999999999999999996555443           3344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||++...                                                          ..       
T Consensus       157 ----~dfg~~~~~----------------------------------------------------------~~-------  167 (308)
T cd06634         157 ----GDFGSASIM----------------------------------------------------------AP-------  167 (308)
T ss_pred             ----CCcccceee----------------------------------------------------------cC-------
Confidence                777765410                                                          00       


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .....++..|+|||.+...                       ....++.++|+|||||++|||++ |..||...+..+..
T Consensus       168 ~~~~~~~~~y~aPE~~~~~-----------------------~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~~~  223 (308)
T cd06634         168 ANXFVGTPYWMAPEVILAM-----------------------DEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSAL  223 (308)
T ss_pred             cccccCCccccCHHHHhhc-----------------------ccCCCCcccchHHHHHHHHHHHc-CCCCCccccHHHHH
Confidence            0011244556666553211                       12356889999999999999999 99998766554444


Q ss_pred             cccccccccCC-------------CCCcCCCCCCHHHHHHHHcC
Q psy17476        243 DRVQRGIILEK-------------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       243 ~~i~~~~~~~~-------------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+.++..+..             .+||...+..|+.+++++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         224 YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             HHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence            44433322211             15888999999999999876

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG2052|consensus

Probab=99.63  E-value=1.4e-16  Score=157.70  Aligned_cols=55  Identities=27%  Similarity=0.410  Sum_probs=49.6

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhc--------ceeccccCcccccccCccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERH--------NYIHRETKKSLYPSSLNEI   60 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~--------~iiHrdikp~N~~~~~~~~   60 (513)
                      ++|||+|||.++    +++.+.+..++..+|+||++||..        .|.|||||..||||..|+.
T Consensus       292 e~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~  354 (513)
T KOG2052|consen  292 EHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT  354 (513)
T ss_pred             cCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc
Confidence            689999999996    478889999999999999999975        3999999999998888874

>KOG2345|consensus

Probab=99.63  E-value=1e-16  Score=147.79  Aligned_cols=173  Identities=20%  Similarity=0.328  Sum_probs=109.6

Q ss_pred             CCCcHHHHHHhcCCCC-CCchhHHHHHHHHHHHHHHHHHhcc--eeccccCcccccccCccccccccCCccCCCceEEEe
Q psy17476          2 RHGSLLNYLRRHENTL-GGNVGLLLDMCIQVCKGMAYLERHN--YIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVAL   78 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~-~~~~~~~~~~~~qi~~gl~ylH~~~--iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~   78 (513)
                      ..|+|.+++.+..... .+++.++..|+.+|+.||.+||+..  ..||||||.|||.+.++           .+.+    
T Consensus       106 ~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~-----------~~vl----  170 (302)
T KOG2345|consen  106 KRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSG-----------LPVL----  170 (302)
T ss_pred             ccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCC-----------ceEE----
Confidence            3699999999854332 3799999999999999999999998  99999999995444432           3333    


Q ss_pred             ccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCc
Q psy17476         79 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE  158 (513)
Q Consensus        79 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  158 (513)
                              .|||-+.-.++++...++..                                                 .-.
T Consensus       171 --------~D~GS~~~a~i~i~~~~~a~-------------------------------------------------~lQ  193 (302)
T KOG2345|consen  171 --------MDLGSATQAPIQIEGSRQAL-------------------------------------------------RLQ  193 (302)
T ss_pred             --------EeccCccccceEeechHHHH-------------------------------------------------HHH
Confidence                    67776654444433322210                                                 000


Q ss_pred             cceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC-
Q psy17476        159 HWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK-  237 (513)
Q Consensus       159 ~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~-  237 (513)
                      +|..   ..-|..|-|||+..-+                       .+...+.++|||||||++|+|+. |..||...- 
T Consensus       194 e~a~---e~Ct~pyRAPELf~vk-----------------------~~~ti~ertDIWSLGCtLYa~mf-~~sPfe~~~~  246 (302)
T KOG2345|consen  194 EWAE---ERCTIPYRAPELFNVK-----------------------SHCTITERTDIWSLGCTLYAMMF-GESPFERIYQ  246 (302)
T ss_pred             HHHH---HhCCCcccCchheecc-----------------------cCcccccccchhhhhHHHHHHHH-cCCcchHHhh
Confidence            1211   1124556666654322                       12355899999999999999998 999996432 


Q ss_pred             -cceeccccccccccCCC-------------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 -NTEVVDRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 -~~~~~~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~  273 (513)
                       ...+.-.+..+....+.             .+...++..||.+.+++..
T Consensus       247 ~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  247 QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence             23333333332221111             2456677777777776653

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.63  E-value=1e-16  Score=162.44  Aligned_cols=53  Identities=17%  Similarity=0.245  Sum_probs=45.6

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|.+++..+.   ++++..++.++.|++.||+|||++||+||||||+||+++.+
T Consensus        89 ~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~  141 (332)
T cd07857          89 EADLHQIIRSGQ---PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNAD  141 (332)
T ss_pred             cCCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCC
Confidence            578988887654   46889999999999999999999999999999999655544

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.63  E-value=1.8e-16  Score=154.57  Aligned_cols=161  Identities=20%  Similarity=0.266  Sum_probs=109.1

Q ss_pred             CCCCcHHHHHHhcC-CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHE-NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++++|.+++.+.. ....+++..++.++.|++.||.|||+++++|+||||+||+++.+            ..++     
T Consensus        84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~------------~~~l-----  146 (260)
T cd08222          84 CEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNN------------LLKI-----  146 (260)
T ss_pred             CCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecC------------CEee-----
Confidence            46899999997632 12247899999999999999999999999999999999655432            1234     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .||++++..                                                         .... . 
T Consensus       147 -------~d~g~~~~~---------------------------------------------------------~~~~-~-  160 (260)
T cd08222         147 -------GDFGVSRLL---------------------------------------------------------MGSC-D-  160 (260)
T ss_pred             -------cccCceeec---------------------------------------------------------CCCc-c-
Confidence                   677665410                                                         0000 0 


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                        ......|+..|+                          +||.+....++.++|+||+|+++|+|++ |..||......
T Consensus       161 --~~~~~~~~~~~~--------------------------~pe~~~~~~~~~~~Dv~slG~~~~~l~~-~~~~~~~~~~~  211 (260)
T cd08222         161 --LATTFTGTPYYM--------------------------SPEALKHQGYDSKSDIWSLGCILYEMCC-LAHAFEGQNFL  211 (260)
T ss_pred             --cccCCCCCcCcc--------------------------CHHHHccCCCCchhhHHHHHHHHHHHHh-CCCCCCCccHH
Confidence              000111333444                          4555555567889999999999999999 99999766555


Q ss_pred             eeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++...+..+..+..+            +||..++..||++.+++.+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         212 SVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             HHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence            544444333332222            4777888888888888865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.62  E-value=1.4e-16  Score=162.94  Aligned_cols=52  Identities=17%  Similarity=0.126  Sum_probs=43.6

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++...     +++..+..++.|++.||+|||++||+||||||+||+++.++
T Consensus       104 ~~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~  155 (353)
T cd07850         104 DANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  155 (353)
T ss_pred             CCCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC
Confidence            46788877653     57889999999999999999999999999999996555543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.62  E-value=1.2e-16  Score=159.12  Aligned_cols=158  Identities=17%  Similarity=0.325  Sum_probs=107.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++...    .+++..++.++.|++.||+|||++|++||||||+||+++.++           ..++      
T Consensus        99 ~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~-----------~~~l------  157 (292)
T cd06657          99 LEGGALTDIVTHT----RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDG-----------RVKL------  157 (292)
T ss_pred             CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC-----------CEEE------
Confidence            4688999987653    357889999999999999999999999999999996665543           2234      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                         .....  
T Consensus       158 ------~dfg~~~~~~---------------------------------------------------------~~~~~--  172 (292)
T cd06657         158 ------SDFGFCAQVS---------------------------------------------------------KEVPR--  172 (292)
T ss_pred             ------cccccceecc---------------------------------------------------------ccccc--
Confidence                  6666554100                                                         00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        .....|+.+|+|||+                          +....++.++|+||+|+++|||++ |..||...+..+
T Consensus       173 --~~~~~~~~~y~~pE~--------------------------~~~~~~~~~~Dv~slGvil~el~t-g~~p~~~~~~~~  223 (292)
T cd06657         173 --RKSLVGTPYWMAPEL--------------------------ISRLPYGPEVDIWSLGIMVIEMVD-GEPPYFNEPPLK  223 (292)
T ss_pred             --ccccccCccccCHHH--------------------------hcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence              001124445555554                          444467889999999999999999 999997665544


Q ss_pred             eccccccccccC--------------CCCCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILE--------------KPKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~--------------~p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+....+..              ..+||..++..|+++.+++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         224 AMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             HHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence            333332221111              115788888899999998875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.62  E-value=2.4e-16  Score=158.69  Aligned_cols=157  Identities=19%  Similarity=0.235  Sum_probs=109.5

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .|+|.+++..+..  ++++..+..++.|++.||.|||+++|+||||||+||+++.++           ..++        
T Consensus       108 ~g~l~~~~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~-----------~~kl--------  166 (317)
T cd06635         108 LGSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG-----------QVKL--------  166 (317)
T ss_pred             CCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCC-----------CEEE--------
Confidence            4788888877654  368899999999999999999999999999999996554443           2344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .||+++....                                                          .       
T Consensus       167 ----~dfg~~~~~~----------------------------------------------------------~-------  177 (317)
T cd06635         167 ----ADFGSASIAS----------------------------------------------------------P-------  177 (317)
T ss_pred             ----ecCCCccccC----------------------------------------------------------C-------
Confidence                6676654100                                                          0       


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .....|+..|+|||++...                       ....++.++|+|||||++|||++ |..||......+..
T Consensus       178 ~~~~~~~~~y~aPE~~~~~-----------------------~~~~~~~~~Dv~slGvil~el~~-g~~p~~~~~~~~~~  233 (317)
T cd06635         178 ANSFVGTPYWMAPEVILAM-----------------------DEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSAL  233 (317)
T ss_pred             cccccCCccccChhhhhcC-----------------------CCCCCCccccHHHHHHHHHHHHh-CCCCCCCccHHHHH
Confidence            0011245566666654211                       12356889999999999999999 99999776655544


Q ss_pred             cccccccccCCC-------------CCcCCCCCCHHHHHHHHcC
Q psy17476        243 DRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       243 ~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+.....++.+             +||...+..|+.+.+++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  277 (317)
T cd06635         234 YHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKH  277 (317)
T ss_pred             HHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence            444333222111             4788889999999998875

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.62  E-value=2e-16  Score=155.00  Aligned_cols=160  Identities=14%  Similarity=0.276  Sum_probs=107.9

Q ss_pred             CCCCcHHHHHHhcC-CCCCCchhHHHHHHHHHHHHHHHHHh-cceeccccCcccccccCccccccccCCccCCCceEEEe
Q psy17476          1 MRHGSLLNYLRRHE-NTLGGNVGLLLDMCIQVCKGMAYLER-HNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVAL   78 (513)
Q Consensus         1 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~gl~ylH~-~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~   78 (513)
                      +++|+|.+++.... ....+++..++.++.|++.||.|||+ .+++||||||+||+++.++           ..++    
T Consensus        91 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~-----------~~~l----  155 (269)
T cd08528          91 IEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDD-----------KVTI----  155 (269)
T ss_pred             CCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCC-----------cEEE----
Confidence            36789999886521 22246888999999999999999996 6899999999996554443           3344    


Q ss_pred             ccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCc
Q psy17476         79 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE  158 (513)
Q Consensus        79 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  158 (513)
                              .|||++....                                                          .. .
T Consensus       156 --------~dfg~~~~~~----------------------------------------------------------~~-~  168 (269)
T cd08528         156 --------TDFGLAKQKQ----------------------------------------------------------PE-S  168 (269)
T ss_pred             --------ecccceeecc----------------------------------------------------------cc-c
Confidence                    6777654100                                                          00 0


Q ss_pred             cceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc
Q psy17476        159 HWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN  238 (513)
Q Consensus       159 ~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~  238 (513)
                         ......|+..|++||                          ++....++.++|+||||+++|||++ |..||...+.
T Consensus       169 ---~~~~~~~~~~~~~Pe--------------------------~~~~~~~~~~~Dv~slG~ll~~l~~-g~~p~~~~~~  218 (269)
T cd08528         169 ---KLTSVVGTILYSCPE--------------------------IVKNEPYGEKADVWAFGCILYQMCT-LQPPFYSTNM  218 (269)
T ss_pred             ---ccccccCcccCcChh--------------------------hhcCCCCchHHHHHHHHHHHHHHHh-CCCcccccCH
Confidence               001112344455544                          4445567899999999999999999 9999976665


Q ss_pred             ceeccccccccccCCC-------------CCcCCCCCCHHHHHHHHc
Q psy17476        239 TEVVDRVQRGIILEKP-------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       239 ~~~~~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~  272 (513)
                      ......+..+...+.+             +||..++..||++.++..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~  265 (269)
T cd08528         219 LSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSA  265 (269)
T ss_pred             HHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence            5444444433322221             478888888888887754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.62  E-value=1.9e-16  Score=156.97  Aligned_cols=58  Identities=24%  Similarity=0.247  Sum_probs=47.4

Q ss_pred             CCCCcHHHHHHhcC-CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHE-NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++.+.. ....+++..+..++.|++.||+|||+.+++||||+|+||+++.+
T Consensus        83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~  141 (287)
T cd06621          83 CEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRK  141 (287)
T ss_pred             cCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecC
Confidence            46899999887632 22246888999999999999999999999999999999655443

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.62  E-value=1.8e-16  Score=156.35  Aligned_cols=158  Identities=21%  Similarity=0.282  Sum_probs=110.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++    .+++..+..++.|++.||.|||+++++|+||||+||+++.++           ..++      
T Consensus        84 ~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~-----------~~~l------  142 (277)
T cd06641          84 LGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-----------EVKL------  142 (277)
T ss_pred             CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCC-----------CEEE------
Confidence            3678999998754    357889999999999999999999999999999996655443           2334      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++...     .                                                     .... 
T Consensus       143 ------~dfg~~~~~~-----~-----------------------------------------------------~~~~-  157 (277)
T cd06641         143 ------ADFGVAGQLT-----D-----------------------------------------------------TQIK-  157 (277)
T ss_pred             ------eecccceecc-----c-----------------------------------------------------chhh-
Confidence                  6776654100     0                                                     0000 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        .....++..|+|||++                          ....++.++|+||+||++|+|++ |..||.......
T Consensus       158 --~~~~~~~~~y~~PE~~--------------------------~~~~~~~~~Dv~slG~~l~~l~~-g~~p~~~~~~~~  208 (277)
T cd06641         158 --RNTFVGTPFWMAPEVI--------------------------KQSAYDSKADIWSLGITAIELAK-GEPPHSELHPMK  208 (277)
T ss_pred             --hccccCCccccChhhh--------------------------ccCCCCchhhHHHHHHHHHHHHc-CCCCCCccchHH
Confidence              0011244556666554                          33456888999999999999999 999998766555


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+..+..+..+            .||..++..|+++.+++.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         209 VLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            55544433322211            4788889999999999876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.62  E-value=2e-16  Score=157.01  Aligned_cols=54  Identities=24%  Similarity=0.343  Sum_probs=45.1

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +|+|.+++..+..  ++++..++.++.|++.||+|||+++|+||||||+||+++.+
T Consensus        86 ~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~  139 (291)
T cd07870          86 HTDLAQYMIQHPG--GLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYL  139 (291)
T ss_pred             cCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCC
Confidence            4788888876543  35788899999999999999999999999999999665544

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.61  E-value=1.4e-16  Score=157.72  Aligned_cols=41  Identities=24%  Similarity=0.276  Sum_probs=36.1

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHhc-ceeccccCcccccccCc
Q psy17476         18 GGNVGLLLDMCIQVCKGMAYLERH-NYIHRETKKSLYPSSLN   58 (513)
Q Consensus        18 ~~~~~~~~~~~~qi~~gl~ylH~~-~iiHrdikp~N~~~~~~   58 (513)
                      .+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus       103 ~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~  144 (288)
T cd06616         103 VIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRN  144 (288)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccC
Confidence            468899999999999999999985 99999999999665544

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.61  E-value=2.4e-16  Score=159.49  Aligned_cols=53  Identities=23%  Similarity=0.241  Sum_probs=45.7

Q ss_pred             CcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         4 g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      ++|.+++.+..   ++++..++.++.|++.||+|||++||+||||||+||+++.++
T Consensus        88 ~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~  140 (330)
T cd07834          88 TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNC  140 (330)
T ss_pred             hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            57888887754   468999999999999999999999999999999996655543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.61  E-value=2.2e-16  Score=158.25  Aligned_cols=55  Identities=20%  Similarity=0.204  Sum_probs=46.4

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++.....  .+++..+..++.|++.||+|||+++++||||||+||+++.++
T Consensus        91 ~~~l~~~l~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~  145 (309)
T cd07845          91 EQDLASLLDNMPT--PFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG  145 (309)
T ss_pred             CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            4688888887543  468899999999999999999999999999999996665543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.61  E-value=2e-16  Score=152.48  Aligned_cols=56  Identities=23%  Similarity=0.368  Sum_probs=48.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++++|.+++.....  .+++..+..++.|++.||.|||+++++||||+|+||+++.+
T Consensus        79 ~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~  134 (253)
T cd05122          79 CSGGSLKDLLKSTNQ--TLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSD  134 (253)
T ss_pred             CCCCcHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccC
Confidence            357999999988643  46888999999999999999999999999999999665554

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.61  E-value=1.4e-16  Score=170.31  Aligned_cols=57  Identities=12%  Similarity=0.076  Sum_probs=43.4

Q ss_pred             CCcHHHHHHhcCCC--CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENT--LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~--~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|.+++......  .......++.++.|++.||+|||+++||||||||+|||++.++
T Consensus       246 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~  304 (501)
T PHA03210        246 DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG  304 (501)
T ss_pred             ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            46788888764211  0123557788999999999999999999999999996665554

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.61  E-value=1.9e-16  Score=156.43  Aligned_cols=55  Identities=24%  Similarity=0.301  Sum_probs=46.6

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|.+++...... .+++..+..++.|++.||+|||+++++||||+|+||+++.+
T Consensus        81 ~~~l~~~~~~~~~~-~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~  135 (283)
T cd07835          81 DLDLKKYMDSSPLT-GLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDRE  135 (283)
T ss_pred             CcCHHHHHhhCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCC
Confidence            46899999876532 36899999999999999999999999999999999655443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.61  E-value=2.1e-16  Score=156.18  Aligned_cols=56  Identities=21%  Similarity=0.285  Sum_probs=45.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++++|..+.....   ++++..++.++.|++.||+|||+.+|+||||+|+||+++.++
T Consensus        82 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~  137 (286)
T cd07846          82 VDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSG  137 (286)
T ss_pred             CCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC
Confidence            35677777665543   368899999999999999999999999999999996655443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.61  E-value=2.2e-16  Score=156.61  Aligned_cols=54  Identities=20%  Similarity=0.270  Sum_probs=46.3

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      .|+|.+++.+...  .+++..++.++.|+++||.|||+++|+||||||+||+++.+
T Consensus        86 ~~~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~  139 (291)
T cd07844          86 DTDLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISER  139 (291)
T ss_pred             CCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCC
Confidence            3689999987654  36888999999999999999999999999999999555444

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.61  E-value=2.1e-16  Score=157.15  Aligned_cols=53  Identities=21%  Similarity=0.269  Sum_probs=44.0

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCccccccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSS   56 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~   56 (513)
                      .|+|.+++...... .+++..+..++.||+.||+|||+++|+||||||+||+++
T Consensus        84 ~~~l~~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~  136 (294)
T PLN00009         84 DLDLKKHMDSSPDF-AKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLID  136 (294)
T ss_pred             cccHHHHHHhCCCC-CcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEE
Confidence            46888888765432 357888999999999999999999999999999995544

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.60  E-value=1.6e-16  Score=157.97  Aligned_cols=55  Identities=16%  Similarity=0.101  Sum_probs=47.1

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++..+..  .+++..++.++.|++.||+|||+++|+||||||+||+++.++
T Consensus        89 ~~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~  143 (293)
T cd07843          89 EHDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRG  143 (293)
T ss_pred             CcCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC
Confidence            4689999887654  368999999999999999999999999999999996665543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.60  E-value=4.5e-16  Score=151.63  Aligned_cols=56  Identities=29%  Similarity=0.349  Sum_probs=48.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh-cceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER-HNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~-~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+..   ++++..+..++.|++.||+|||+ .+++||||+|+||+++.++
T Consensus        81 ~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~  137 (264)
T cd06623          81 MDGGSLADLLKKVG---KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKG  137 (264)
T ss_pred             cCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCC
Confidence            46799999998863   46899999999999999999999 9999999999996665554

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0666|consensus

Probab=99.60  E-value=2.9e-16  Score=148.96  Aligned_cols=70  Identities=20%  Similarity=0.253  Sum_probs=56.2

Q ss_pred             cHHHHHHhcCCC--CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          5 SLLNYLRRHENT--LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         5 ~L~~~l~~~~~~--~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      ||...|+-|+..  .-++...+++++.||+.|+.|||++=|+||||||.||||..++.       ...++||        
T Consensus       113 DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgp-------erG~VKI--------  177 (438)
T KOG0666|consen  113 DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGP-------ERGRVKI--------  177 (438)
T ss_pred             hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCC-------ccCeeEe--------
Confidence            677777775532  23788899999999999999999999999999999988777742       2345566        


Q ss_pred             ccCCCCccccc
Q psy17476         83 AIEGGDLSLEK   93 (513)
Q Consensus        83 ~~~~~~~~l~~   93 (513)
                          +|||+++
T Consensus       178 ----aDlGlaR  184 (438)
T KOG0666|consen  178 ----ADLGLAR  184 (438)
T ss_pred             ----ecccHHH
Confidence                8899887

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.60  E-value=7.7e-16  Score=151.94  Aligned_cols=55  Identities=18%  Similarity=0.338  Sum_probs=47.2

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +|+|.+++...... .+++..+..++.|++.||.|||+++++|+||||+||+++.+
T Consensus        81 ~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~  135 (283)
T cd07830          81 EGNLYQLMKDRKGK-PFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGP  135 (283)
T ss_pred             CCCHHHHHHhcccc-cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC
Confidence            78999999886522 46889999999999999999999999999999999555443

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.60  E-value=4.8e-16  Score=157.95  Aligned_cols=53  Identities=21%  Similarity=0.241  Sum_probs=45.6

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +|+|.+++.++.   .+++..+..++.|++.||.|||+++++||||||+||+++.+
T Consensus        92 ~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~  144 (337)
T cd07858          92 DTDLHQIIRSSQ---TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN  144 (337)
T ss_pred             CCCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC
Confidence            478888887654   46899999999999999999999999999999999655444

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.59  E-value=5.8e-16  Score=154.88  Aligned_cols=55  Identities=16%  Similarity=0.189  Sum_probs=45.0

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .++|.+++.....  .+++..++.++.|+++||+|||+++|+||||||+||+++.++
T Consensus        98 ~~~l~~~~~~~~~--~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~  152 (311)
T cd07866          98 DHDLSGLLENPSV--KLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQG  152 (311)
T ss_pred             CcCHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            3567777766433  368999999999999999999999999999999996655543

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.59  E-value=5.7e-16  Score=155.77  Aligned_cols=157  Identities=17%  Similarity=0.222  Sum_probs=108.0

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .|+|.+++.....  ++++..+..++.|++.||.|||++||+||||||+||+++.++           ..++        
T Consensus       104 ~~~l~~~l~~~~~--~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~-----------~~kL--------  162 (313)
T cd06633         104 LGSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG-----------QVKL--------  162 (313)
T ss_pred             CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCC-----------CEEE--------
Confidence            4788888877554  368889999999999999999999999999999996655543           2233        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .||+++....                                                                 .
T Consensus       163 ----~dfg~~~~~~-----------------------------------------------------------------~  173 (313)
T cd06633         163 ----ADFGSASKSS-----------------------------------------------------------------P  173 (313)
T ss_pred             ----eecCCCcccC-----------------------------------------------------------------C
Confidence                5666543100                                                                 0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .....|+..|+|||++...                       ....++.++|+||+||++|||++ |..||...+.....
T Consensus       174 ~~~~~~~~~y~aPE~~~~~-----------------------~~~~~~~~sDv~slGvil~el~~-g~~p~~~~~~~~~~  229 (313)
T cd06633         174 ANSFVGTPYWMAPEVILAM-----------------------DEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSAL  229 (313)
T ss_pred             CCCccccccccChhhcccc-----------------------CCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Confidence            0011255667777765321                       12356889999999999999999 99999776654433


Q ss_pred             cccccccccCC-------------CCCcCCCCCCHHHHHHHHcC
Q psy17476        243 DRVQRGIILEK-------------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       243 ~~i~~~~~~~~-------------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+.....+..             .+||...+..|+.+.+++.+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         230 YHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             HHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            33322211111             14788888899999998876

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.59  E-value=4.4e-16  Score=150.57  Aligned_cols=157  Identities=20%  Similarity=0.271  Sum_probs=106.6

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      ++|+|.+++.+..   .+++..+..++.|++.||.|||+.+++|+||||+||+++.++           ..++       
T Consensus        76 ~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~-----------~~~l-------  134 (250)
T cd05123          76 PGGELFSHLSKEG---RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADG-----------HIKL-------  134 (250)
T ss_pred             CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCC-----------cEEE-------
Confidence            5899999998865   468889999999999999999999999999999996665543           2233       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .||+++.-..                                                          ...   .
T Consensus       135 -----~d~~~~~~~~----------------------------------------------------------~~~---~  148 (250)
T cd05123         135 -----TDFGLAKELS----------------------------------------------------------SEG---S  148 (250)
T ss_pred             -----eecCcceecc----------------------------------------------------------cCC---C
Confidence                 5666543000                                                          000   0


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      ......++.+|++||.                          +.....+.++|+||||+++|++++ |..||...+..++
T Consensus       149 ~~~~~~~~~~~~~Pe~--------------------------~~~~~~~~~~D~~slG~~~~~l~~-g~~p~~~~~~~~~  201 (250)
T cd05123         149 RTNTFCGTPEYLAPEV--------------------------LLGKGYGKAVDWWSLGVLLYEMLT-GKPPFYAEDRKEI  201 (250)
T ss_pred             cccCCcCCccccChHH--------------------------hCCCCCCchhhHHHHHHHHHHHHH-CCCCCCCCCHHHH
Confidence            0011124455555554                          444456889999999999999999 9999987766555


Q ss_pred             ccccccccccCCC------------CCcCCCCCCHHHH---HHHHcC
Q psy17476        242 VDRVQRGIILEKP------------KAWYVGDMSRQRA---ESILKQ  273 (513)
Q Consensus       242 ~~~i~~~~~~~~p------------~~w~~~~~~R~~a---eeLL~~  273 (513)
                      ...+... ..+.|            +||..++..|+.+   ++++.+
T Consensus       202 ~~~~~~~-~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~  247 (250)
T cd05123         202 YEKILKD-PLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAH  247 (250)
T ss_pred             HHHHhcC-CCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence            5554432 12222            4566777777777   566543

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=5.7e-16  Score=149.90  Aligned_cols=159  Identities=22%  Similarity=0.337  Sum_probs=106.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++++|.+++.+..   .+++..+..++.|++.||.|||+++|+||||||+||+++.++           ..++      
T Consensus        81 ~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~-----------~~~l------  140 (254)
T cd06627          81 AENGSLRQIIKKFG---PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDG-----------VVKL------  140 (254)
T ss_pred             CCCCcHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCC-----------CEEE------
Confidence            35789999998763   468999999999999999999999999999999996655543           2234      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++....                                                          ....  
T Consensus       141 ------~d~~~~~~~~----------------------------------------------------------~~~~--  154 (254)
T cd06627         141 ------ADFGVATKLN----------------------------------------------------------DVSK--  154 (254)
T ss_pred             ------eccccceecC----------------------------------------------------------CCcc--
Confidence                  6666654100                                                          0000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..|++||+                          .....++.++|+||+|+++|+|++ |..||...+...
T Consensus       155 -~~~~~~~~~~y~~pe~--------------------------~~~~~~~~~~Dv~~lG~~l~~l~~-g~~p~~~~~~~~  206 (254)
T cd06627         155 -DDASVVGTPYWMAPEV--------------------------IEMSGASTASDIWSLGCTVIELLT-GNPPYYDLNPMA  206 (254)
T ss_pred             -cccccccchhhcCHhh--------------------------hcCCCCCcchhHHHHHHHHHHHHh-CCCCCCCccHHH
Confidence             0001124445555554                          444456889999999999999999 999997655443


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+......+.+            .||...+..|+++.+++.+
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  251 (254)
T cd06627         207 ALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH  251 (254)
T ss_pred             HHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence            33333222222222            3566777778887777754

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.59  E-value=5.6e-16  Score=153.19  Aligned_cols=54  Identities=22%  Similarity=0.163  Sum_probs=41.9

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++.|..++.+ ..  ++++..+..++.|++.||+|||+++++||||||+||+++.+
T Consensus        83 ~~~~l~~~~~~-~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~  136 (288)
T cd07833          83 ERTLLELLEAS-PG--GLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSES  136 (288)
T ss_pred             CCCHHHHHHhc-CC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC
Confidence            44455444433 32  36888999999999999999999999999999999555443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.59  E-value=5.9e-16  Score=152.19  Aligned_cols=55  Identities=20%  Similarity=0.257  Sum_probs=48.8

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      ++|+|.+++.+..   .+++..+..++.|++.||+|||+++++|+||||+||+++.++
T Consensus        85 ~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~  139 (280)
T cd05581          85 PNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDM  139 (280)
T ss_pred             CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC
Confidence            5899999998865   468899999999999999999999999999999997666554

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.59  E-value=7.4e-16  Score=153.46  Aligned_cols=161  Identities=20%  Similarity=0.346  Sum_probs=103.8

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh-cceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER-HNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~-~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      +++|.+++.....  .+++..+..++.|++.||+|||+ .+|+||||+|+||+++.+           ...++       
T Consensus        97 ~~~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~-----------~~~kL-------  156 (296)
T cd06618          97 STCLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDAS-----------GNVKL-------  156 (296)
T ss_pred             CcCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCC-----------CCEEE-------
Confidence            4567777666443  46888999999999999999997 599999999999554433           33455       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .|||++....                                                         + ...   
T Consensus       157 -----~dfg~~~~~~---------------------------------------------------------~-~~~---  170 (296)
T cd06618         157 -----CDFGISGRLV---------------------------------------------------------D-SKA---  170 (296)
T ss_pred             -----Cccccchhcc---------------------------------------------------------C-CCc---
Confidence                 7777654100                                                         0 000   


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc-ce
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE  240 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~-~~  240 (513)
                       .....++..|++||++....                      ....++.++|+||||+++|||++ |..||..... .+
T Consensus       171 -~~~~~~~~~y~aPE~~~~~~----------------------~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~~  226 (296)
T cd06618         171 -KTRSAGCAAYMAPERIDPPD----------------------PNPKYDIRADVWSLGISLVELAT-GQFPYKNCKTEFE  226 (296)
T ss_pred             -ccCCCCCccccCHhhcCCCC----------------------CccccccchhHHHHHHHHHHHHh-CCCCCCcchhHHH
Confidence             00011445566666553221                      01246889999999999999999 9999975332 23


Q ss_pred             ecccccccccc--CC----C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIIL--EK----P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~--~~----p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+..+......  +.    +        +||..++..||.+++++.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         227 VLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            33222211111  11    1        5788888999999988875

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0664|consensus

Probab=99.59  E-value=6.7e-17  Score=150.63  Aligned_cols=121  Identities=17%  Similarity=0.297  Sum_probs=87.7

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccccccCCCCcccccCCeE
Q psy17476         18 GGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEY   97 (513)
Q Consensus        18 ~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   97 (513)
                      +++.+.++-+++||+.||.|||+.+|+||||||-|+|++.|.    +       .||            .||||++-+..
T Consensus       152 ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNC----v-------LKI------------CDFGLARvee~  208 (449)
T KOG0664|consen  152 ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNC----I-------LKI------------CDFGLARTWDQ  208 (449)
T ss_pred             CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCc----e-------EEe------------cccccccccch
Confidence            578889999999999999999999999999999997777763    2       366            89999882110


Q ss_pred             EeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCc
Q psy17476         98 EVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNY  177 (513)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~  177 (513)
                            +                                                    +.  -......-|..|.+||.
T Consensus       209 ------d----------------------------------------------------~~--~hMTqEVVTQYYRAPEi  228 (449)
T KOG0664|consen  209 ------R----------------------------------------------------DR--LNMTHEVVTQYYRAPEL  228 (449)
T ss_pred             ------h----------------------------------------------------hh--hhhHHHHHHHHhccHHH
Confidence                  0                                                    00  00000011223333333


Q ss_pred             eeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceecccccc
Q psy17476        178 VKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQR  247 (513)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~i~~  247 (513)
                      +                         .+.+.|+.++||||.||++.|++. .+..|...++.+.++.|..
T Consensus       229 L-------------------------MGaRhYs~AvDiWSVGCIFaELLg-RrILFQAq~PiqQL~lItd  272 (449)
T KOG0664|consen  229 L-------------------------MGARRYTGAVDIWSVGCIFAELLQ-RKILFQAAGPIEQLQMIID  272 (449)
T ss_pred             h-------------------------hcchhhcCccceehhhHHHHHHHh-hhhhhhccChHHHHHHHHH
Confidence            2                         235679999999999999999998 8999998888877777753

>KOG0670|consensus

Probab=99.59  E-value=1.6e-15  Score=152.51  Aligned_cols=132  Identities=15%  Similarity=0.256  Sum_probs=101.9

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .-+|..+|++.+..+||....++.|+.|+..||..|-.-||+|.||||.||||+....              .+++    
T Consensus       517 slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~--------------iLKL----  578 (752)
T KOG0670|consen  517 SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKN--------------ILKL----  578 (752)
T ss_pred             hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcc--------------eeee----
Confidence            3589999999888889999999999999999999999999999999999987777642              2333    


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          +|||-+.-                                                                    
T Consensus       579 ----CDfGSA~~--------------------------------------------------------------------  586 (752)
T KOG0670|consen  579 ----CDFGSASF--------------------------------------------------------------------  586 (752)
T ss_pred             ----ccCccccc--------------------------------------------------------------------
Confidence                45554320                                                                    


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                       .+..--..|+.+.+                    +.|||-|.+.+|+...|+||.||+|||+.| |++.|++..+..++
T Consensus       587 -~~eneitPYLVSRF--------------------YRaPEIiLG~~yd~~iD~WSvgctLYElYt-GkIlFpG~TNN~ML  644 (752)
T KOG0670|consen  587 -ASENEITPYLVSRF--------------------YRAPEIILGLPYDYPIDTWSVGCTLYELYT-GKILFPGRTNNQML  644 (752)
T ss_pred             -cccccccHHHHHHh--------------------ccCcceeecCcccCCccceeeceeeEEeec-cceecCCCCcHHHH
Confidence             00001122333333                    346777888999999999999999999999 99999999888877


Q ss_pred             cccc
Q psy17476        243 DRVQ  246 (513)
Q Consensus       243 ~~i~  246 (513)
                      ....
T Consensus       645 rl~m  648 (752)
T KOG0670|consen  645 RLFM  648 (752)
T ss_pred             HHHH
Confidence            6554

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.58  E-value=6.7e-16  Score=154.90  Aligned_cols=55  Identities=16%  Similarity=0.224  Sum_probs=45.6

Q ss_pred             CCcHHHHHHhcCC--CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccC
Q psy17476          3 HGSLLNYLRRHEN--TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSL   57 (513)
Q Consensus         3 ~g~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~   57 (513)
                      +++|.+++..+..  ...+++..++.++.|++.||+|||+++|+||||||+||+++.
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~  143 (316)
T cd07842          87 EHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMG  143 (316)
T ss_pred             CcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcC
Confidence            4678888766432  224788899999999999999999999999999999976665

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG3653|consensus

Probab=99.58  E-value=5.7e-16  Score=154.55  Aligned_cols=54  Identities=22%  Similarity=0.278  Sum_probs=48.8

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhc---------ceeccccCcccccccCcc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERH---------NYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~---------~iiHrdikp~N~~~~~~~   59 (513)
                      ++|||.+||+.|.    ++|....+|+..++.||+|||+.         .|+|||||.+||||..|.
T Consensus       291 ~kGsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~Dl  353 (534)
T KOG3653|consen  291 PKGSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDL  353 (534)
T ss_pred             cCCcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCC
Confidence            6899999999984    68999999999999999999975         499999999998777775

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.58  E-value=8.2e-16  Score=156.19  Aligned_cols=53  Identities=21%  Similarity=0.117  Sum_probs=44.9

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++.+.    .+++..++.++.|++.||+|||++||+||||||+||+++.++
T Consensus        92 ~~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~  144 (337)
T cd07852          92 ETDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDC  144 (337)
T ss_pred             ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            36888888765    357889999999999999999999999999999996665543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.58  E-value=4.9e-16  Score=154.90  Aligned_cols=54  Identities=19%  Similarity=0.223  Sum_probs=45.0

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      .|+|.+++..+..  .++++.++.++.|++.||+|||+++|+||||||+||+++.+
T Consensus        99 ~~~l~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~  152 (302)
T cd07864          99 DHDLMGLLESGLV--HFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNK  152 (302)
T ss_pred             CccHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence            3578888776533  46899999999999999999999999999999999555443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.58  E-value=6.3e-16  Score=156.83  Aligned_cols=54  Identities=13%  Similarity=0.162  Sum_probs=46.2

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++....   .+++..+..++.|++.||+|||+++|+||||||+||+++.++
T Consensus       103 ~~~l~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~  156 (335)
T PTZ00024        103 ASDLKKVVDRKI---RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKG  156 (335)
T ss_pred             ccCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCC
Confidence            478999987644   358889999999999999999999999999999996665543

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.57  E-value=4.7e-16  Score=158.45  Aligned_cols=52  Identities=19%  Similarity=0.253  Sum_probs=44.6

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|.+++...    .+++..++.++.|++.||+|||++||+||||||+||+++.+
T Consensus       103 ~~~L~~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~  154 (343)
T cd07851         103 GADLNNIVKCQ----KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED  154 (343)
T ss_pred             CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC
Confidence            57888888763    36888999999999999999999999999999999555443

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.57  E-value=1.2e-15  Score=164.59  Aligned_cols=147  Identities=12%  Similarity=0.080  Sum_probs=89.6

Q ss_pred             CCCCcHHHHHHhcCCCC-----------------CCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcccccc
Q psy17476          1 MRHGSLLNYLRRHENTL-----------------GGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFI   63 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~-----------------~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~   63 (513)
                      +++|+|.+++.......                 ......+..++.|++.||+|||+++||||||||+|||++.      
T Consensus       217 ~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~------  290 (566)
T PLN03225        217 EGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSE------  290 (566)
T ss_pred             cCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeC------
Confidence            35789999988653211                 0123346789999999999999999999999999954432      


Q ss_pred             ccCCccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCC
Q psy17476         64 LWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLS  143 (513)
Q Consensus        64 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  143 (513)
                          .....|+            .|||+++....                                              
T Consensus       291 ----~~~~~KL------------~DFGlA~~l~~----------------------------------------------  308 (566)
T PLN03225        291 ----GSGSFKI------------IDLGAAADLRV----------------------------------------------  308 (566)
T ss_pred             ----CCCcEEE------------EeCCCcccccc----------------------------------------------
Confidence                2334566            78888751000                                              


Q ss_pred             CCCCCEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeee
Q psy17476        144 LEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMW  223 (513)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~  223 (513)
                         +..           .......++.+|++||.+.....   .+..+.......++|+ +....++.++||||+||++|
T Consensus       309 ---~~~-----------~~~~~~~~t~~Y~APE~~~~~~~---~~~~~~~~~~~~~sp~-l~~~~~~~k~DVwSlGviL~  370 (566)
T PLN03225        309 ---GIN-----------YIPKEFLLDPRYAAPEQYIMSTQ---TPSAPSAPVATALSPV-LWQLNLPDRFDIYSAGLIFL  370 (566)
T ss_pred             ---ccc-----------cCCcccccCCCccChHHhhccCC---CCCCccccccccccch-hccccCCCCcccHHHHHHHH
Confidence               000           00012236778899985422110   0011111222233343 33346788899999999999


Q ss_pred             eeeecCCCCCC
Q psy17476        224 EVFTCGKMPYG  234 (513)
Q Consensus       224 el~t~g~~pf~  234 (513)
                      ||++ +..|++
T Consensus       371 el~~-~~~~~~  380 (566)
T PLN03225        371 QMAF-PNLRSD  380 (566)
T ss_pred             HHHh-CcCCCc
Confidence            9998 666543

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.57  E-value=8.5e-16  Score=151.42  Aligned_cols=55  Identities=18%  Similarity=0.311  Sum_probs=46.7

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .++|.+++.....  .+++..+..++.|++.||.|||+++|+|+||||+||+++.++
T Consensus        81 ~~~l~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~  135 (283)
T cd05118          81 DTDLYKLIKDRQR--GLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEG  135 (283)
T ss_pred             CCCHHHHHHhhcc--cCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCC
Confidence            4688888888543  468889999999999999999999999999999996655443

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.56  E-value=9.5e-16  Score=151.91  Aligned_cols=55  Identities=15%  Similarity=0.075  Sum_probs=47.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++.++.   .+++..++.++.|++.||+|||+.+++||||||+||+++.+
T Consensus        87 ~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~  141 (288)
T cd05583          87 VNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSE  141 (288)
T ss_pred             CCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC
Confidence            46899999998754   36888999999999999999999999999999999655443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.56  E-value=1.4e-15  Score=150.06  Aligned_cols=54  Identities=20%  Similarity=0.181  Sum_probs=45.7

Q ss_pred             CcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         4 g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      ++|.+++.+...  .+++..++.++.|++.||+|||+++++|+||||+||+++.++
T Consensus        84 ~~l~~~~~~~~~--~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~  137 (287)
T cd07840          84 HDLTGLLDSPEV--KFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDG  137 (287)
T ss_pred             ccHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCC
Confidence            588888877543  468889999999999999999999999999999996555543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.56  E-value=1.3e-15  Score=150.09  Aligned_cols=54  Identities=22%  Similarity=0.340  Sum_probs=46.5

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      .++|.+++.++..  .+++..+..++.|++.||+|||+++|+||||+|+||+++.+
T Consensus        81 ~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~  134 (282)
T cd07829          81 DMDLKKYLDKRPG--PLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRD  134 (282)
T ss_pred             CcCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCC
Confidence            4689999998642  36889999999999999999999999999999999555443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.56  E-value=8.1e-16  Score=156.87  Aligned_cols=52  Identities=19%  Similarity=0.253  Sum_probs=44.0

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +|+|.+++..+    .+++..++.++.|++.||+|||+++|+||||||+||+++.+
T Consensus       105 ~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~  156 (345)
T cd07877         105 GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED  156 (345)
T ss_pred             ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCC
Confidence            67888877653    25888999999999999999999999999999999655444

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.55  E-value=2.3e-15  Score=173.88  Aligned_cols=51  Identities=12%  Similarity=0.065  Sum_probs=44.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHH---hcceeccccCcccccccC
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLE---RHNYIHRETKKSLYPSSL   57 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH---~~~iiHrdikp~N~~~~~   57 (513)
                      |++|+|.+++++      +++..+..++.|+|.||+|||   +.+|+||||||+||+++.
T Consensus       765 ~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~  818 (968)
T PLN00113        765 IEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG  818 (968)
T ss_pred             CCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC
Confidence            579999999963      478899999999999999999   668999999999955443

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.54  E-value=3.7e-15  Score=144.19  Aligned_cols=54  Identities=22%  Similarity=0.318  Sum_probs=47.9

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      ++++|.+++.+..   .+++..+..++.|++.||+|||+.+++|+||+|+||+++.+
T Consensus        84 ~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~  137 (260)
T cd06606          84 SGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSD  137 (260)
T ss_pred             CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCC
Confidence            5899999998865   46889999999999999999999999999999999665554

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.53  E-value=1.2e-15  Score=155.39  Aligned_cols=41  Identities=17%  Similarity=0.204  Sum_probs=36.1

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476         18 GGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus        18 ~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      .++++.+..++.|++.||+|||+++|+||||||+||+++.+
T Consensus       113 ~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~  153 (342)
T cd07879         113 PLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNED  153 (342)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence            36888999999999999999999999999999999555443

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.53  E-value=3.4e-15  Score=164.92  Aligned_cols=80  Identities=19%  Similarity=0.216  Sum_probs=62.5

Q ss_pred             CCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceeccccccccccCC--------------CCCcC
Q psy17476        193 NGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEK--------------PKAWY  258 (513)
Q Consensus       193 ~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~--------------p~~w~  258 (513)
                      -|++.+|+||++....|+.++|||||||++|||++ |..||......+++..+........              ..+|.
T Consensus       541 vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~Ellt-G~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~  619 (669)
T cd05610         541 LGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLT-GIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLT  619 (669)
T ss_pred             eeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcc
Confidence            35778999999999999999999999999999999 9999988776666555532211111              03677


Q ss_pred             CCCCCHHHHHHHHcC
Q psy17476        259 VGDMSRQRAESILKQ  273 (513)
Q Consensus       259 ~~~~~R~~aeeLL~~  273 (513)
                      .++..|+.+.++|.+
T Consensus       620 ~dP~~R~ta~e~l~h  634 (669)
T cd05610         620 MDPTKRAGLKELKQH  634 (669)
T ss_pred             cChhHCcCHHHHHhC
Confidence            788888888888876

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.53  E-value=2.9e-15  Score=151.68  Aligned_cols=52  Identities=19%  Similarity=0.226  Sum_probs=43.6

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|.++++..    ++++..+..++.|+++||+|||+++|+||||||+||+++.+
T Consensus        93 ~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~  144 (328)
T cd07856          93 GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINEN  144 (328)
T ss_pred             ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCC
Confidence            57888888653    35778899999999999999999999999999999555443

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.52  E-value=3e-15  Score=152.53  Aligned_cols=52  Identities=17%  Similarity=0.227  Sum_probs=43.9

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|.+++...    .+++..++.++.|++.||+|||+++|+||||||+||+++.+
T Consensus       103 ~~~l~~~~~~~----~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~  154 (343)
T cd07880         103 GTDLGKLMKHE----KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNED  154 (343)
T ss_pred             CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence            56788877643    36888999999999999999999999999999999655443

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0662|consensus

Probab=99.51  E-value=6.5e-15  Score=129.63  Aligned_cols=142  Identities=20%  Similarity=0.350  Sum_probs=98.8

Q ss_pred             cHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccccc
Q psy17476          5 SLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAI   84 (513)
Q Consensus         5 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   84 (513)
                      +|..|......  .++.+.++.++.|++.||.|+|+++++|||+||.|+||+.+|.           .|+          
T Consensus        86 dlkkyfdslng--~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~nge-----------lkl----------  142 (292)
T KOG0662|consen   86 DLKKYFDSLNG--DLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGE-----------LKL----------  142 (292)
T ss_pred             HHHHHHHhcCC--cCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCc-----------EEe----------
Confidence            45566555332  3688899999999999999999999999999999977777763           345          


Q ss_pred             CCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeee
Q psy17476         85 EGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK  164 (513)
Q Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  164 (513)
                        .|||+++-                   .|+.           |+-|                               .
T Consensus       143 --adfglara-------------------fgip-----------vrcy-------------------------------s  159 (292)
T KOG0662|consen  143 --ADFGLARA-------------------FGIP-----------VRCY-------------------------------S  159 (292)
T ss_pred             --cccchhhh-------------------cCCc-----------eEee-------------------------------e
Confidence              88888871                   1110           0000                               0


Q ss_pred             cCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceeccc
Q psy17476        165 DKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDR  244 (513)
Q Consensus       165 ~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~  244 (513)
                      ...-+.-|.||..+-                         +.+-|+...|+||.||++.|+...|.+.|++.+..+.+.+
T Consensus       160 aevvtlwyrppdvlf-------------------------gakly~tsidmwsagcifaelanagrplfpg~dvddqlkr  214 (292)
T KOG0662|consen  160 AEVVTLWYRPPDVLF-------------------------GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR  214 (292)
T ss_pred             ceeeeeeccCcceee-------------------------eeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHH
Confidence            001233456666553                         3346899999999999999999889999998887766666


Q ss_pred             cccccccCCCCCc
Q psy17476        245 VQRGIILEKPKAW  257 (513)
Q Consensus       245 i~~~~~~~~p~~w  257 (513)
                      |-.....|....|
T Consensus       215 if~~lg~p~ed~w  227 (292)
T KOG0662|consen  215 IFRLLGTPTEDQW  227 (292)
T ss_pred             HHHHhCCCccccC
Confidence            6543333334444

>KOG0595|consensus

Probab=99.50  E-value=4.1e-14  Score=139.30  Aligned_cols=79  Identities=27%  Similarity=0.396  Sum_probs=68.6

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC------HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      .+|.+.+.||+|+||.||+|+++.+...+++|...+.      .+....|+.||+.++|||||+|+.++...+.+|||||
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            5788888899999999999999987777777743332      3457889999999999999999999999999999999


Q ss_pred             cCCCC
Q psy17476        503 TSSFR  507 (513)
Q Consensus       503 ~~~~G  507 (513)
                      ||.||
T Consensus        90 yC~gG   94 (429)
T KOG0595|consen   90 YCNGG   94 (429)
T ss_pred             eCCCC
Confidence            99975

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.48  E-value=1.8e-14  Score=137.65  Aligned_cols=157  Identities=20%  Similarity=0.286  Sum_probs=107.6

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      ++|+|.+++.....   +++..+..++.|++.++.|||+++|+|+||+|+||+++.++           ..++       
T Consensus        70 ~~~~L~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~-----------~~~l-------  128 (244)
T smart00220       70 DGGDLFDLLKKRGR---LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDG-----------HVKL-------  128 (244)
T ss_pred             CCCCHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCC-----------cEEE-------
Confidence            56799999987542   57889999999999999999999999999999996665543           2233       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .||+++.....                                                          ..    
T Consensus       129 -----~d~~~~~~~~~----------------------------------------------------------~~----  141 (244)
T smart00220      129 -----ADFGLARQLDP----------------------------------------------------------GG----  141 (244)
T ss_pred             -----ccccceeeecc----------------------------------------------------------cc----
Confidence                 66665541000                                                          00    


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCC-CCcce
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGR-LKNTE  240 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~-~~~~~  240 (513)
                      ......++..|+|||.                          +....++.++|+||+|+++|++++ |..||.. .+...
T Consensus       142 ~~~~~~~~~~~~~pE~--------------------------~~~~~~~~~~Di~slG~~l~~l~~-~~~p~~~~~~~~~  194 (244)
T smart00220      142 LLTTFVGTPEYMAPEV--------------------------LLGKGYGKAVDVWSLGVILYELLT-GKPPFPGDDQLLE  194 (244)
T ss_pred             ccccccCCcCCCCHHH--------------------------HccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcHHH
Confidence            0011124444555554                          444467889999999999999999 9999977 44444


Q ss_pred             eccccccccccC------CC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILE------KP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~------~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.+.+..+....      .+        +||..++..||.+.+++..
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~  241 (244)
T smart00220      195 LFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQH  241 (244)
T ss_pred             HHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhC
Confidence            444444333321      11        4677888888888888764

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1151|consensus

Probab=99.44  E-value=1.4e-13  Score=136.16  Aligned_cols=135  Identities=24%  Similarity=0.411  Sum_probs=96.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhc--ceeccccCcccccccCccccccccCCccCCCceEEEe
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERH--NYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVAL   78 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~--~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~   78 (513)
                      .+|.+|+-||+.++   -+++..++.|+-||+.||.||-+.  .|||-||||-|          |||.+..-+..|.+  
T Consensus       550 ceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgN----------ILLv~GtacGeIKI--  614 (775)
T KOG1151|consen  550 CEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGN----------ILLVNGTACGEIKI--  614 (775)
T ss_pred             cCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCcc----------EEEecCcccceeEe--
Confidence            36889999999987   358999999999999999999987  49999999999          56665544443333  


Q ss_pred             ccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCc
Q psy17476         79 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE  158 (513)
Q Consensus        79 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  158 (513)
                              .||||++     ++++...+                                                 ..+
T Consensus       615 --------TDFGLSK-----IMdddSy~-------------------------------------------------~vd  632 (775)
T KOG1151|consen  615 --------TDFGLSK-----IMDDDSYN-------------------------------------------------SVD  632 (775)
T ss_pred             --------eecchhh-----hccCCccC-------------------------------------------------ccc
Confidence                    8999987     22211100                                                 000


Q ss_pred             cceeeecCCCccccccCCcee-eccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCC
Q psy17476        159 HWWKVKDKNGSVGYIPSNYVK-EKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRL  236 (513)
Q Consensus       159 ~~~~~~~~~g~~g~~pp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~  236 (513)
                      .--......||.-|+|||-.. +.+.                       ...+.++||||+|+++|..+. |+.||...
T Consensus       633 GmeLTSQgAGTYWYLPPEcFvVgkeP-----------------------PKIsnKVDVWSvGVIFyQClY-GrKPFGhn  687 (775)
T KOG1151|consen  633 GMELTSQGAGTYWYLPPECFVVGKEP-----------------------PKISNKVDVWSVGVIFYQCLY-GRKPFGHN  687 (775)
T ss_pred             ceeeecccCceeeecCcceeecCCCC-----------------------CccccceeeEeeehhhhhhhc-cCCCCCCc
Confidence            001112345888899998543 3221                       156899999999999999987 99999643

>KOG1345|consensus

Probab=99.43  E-value=1.3e-13  Score=129.01  Aligned_cols=53  Identities=15%  Similarity=0.165  Sum_probs=43.6

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      |.|||..-+...    |+-+.-.+.++.|+++|+.|||++++||||||.+||||...
T Consensus       105 P~gdL~snv~~~----GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~  157 (378)
T KOG1345|consen  105 PRGDLRSNVEAA----GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA  157 (378)
T ss_pred             ccchhhhhcCcc----cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC
Confidence            568887665553    46677889999999999999999999999999999654443

>KOG1290|consensus

Probab=99.43  E-value=1.8e-13  Score=137.16  Aligned_cols=57  Identities=26%  Similarity=0.408  Sum_probs=50.3

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhc-ceeccccCcccccccCccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERH-NYIHRETKKSLYPSSLNEI   60 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~-~iiHrdikp~N~~~~~~~~   60 (513)
                      |-+|+.+|++...+ +++...++.|++||+.||.|||++ ||||.||||+|||+...++
T Consensus       169 GdnLLklI~~s~Yr-Glpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~  226 (590)
T KOG1290|consen  169 GDNLLKLIKYSNYR-GLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEI  226 (590)
T ss_pred             hhHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecccc
Confidence            45899999997666 688899999999999999999997 7999999999988777654

>KOG1152|consensus

Probab=99.40  E-value=1.5e-13  Score=140.18  Aligned_cols=54  Identities=17%  Similarity=0.156  Sum_probs=46.6

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      ++-||++||..+.+   +++..++-|++||+.|+++||+.||||||||-+||.++.+
T Consensus       653 ~gIDLFd~IE~kp~---m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~  706 (772)
T KOG1152|consen  653 EGIDLFDFIEFKPR---MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSN  706 (772)
T ss_pred             CCcchhhhhhccCc---cchHHHHHHHHHHHhccccccccCceecccccccEEEecC
Confidence            45689999999864   5899999999999999999999999999999999433333

>KOG0192|consensus

Probab=99.39  E-value=4.8e-13  Score=135.74  Aligned_cols=88  Identities=41%  Similarity=0.630  Sum_probs=74.5

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC-----HHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-----EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-----~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      ...|++..+++...+.||+|+||+||+|.|++...|++++.....     .++|.+|+.+|++++|||||+|+|+|.+..
T Consensus        33 ~~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~  112 (362)
T KOG0192|consen   33 LPEEEIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP  112 (362)
T ss_pred             ccceecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            356788888888888999999999999999987555555433222     358999999999999999999999999877


Q ss_pred             -eeEEEEccCCCCc
Q psy17476        496 -PIYIVTDTSSFRL  508 (513)
Q Consensus       496 -~~~lV~E~~~~Gl  508 (513)
                       ..+||||||++|.
T Consensus       113 ~~~~iVtEy~~~Gs  126 (362)
T KOG0192|consen  113 GSLCIVTEYMPGGS  126 (362)
T ss_pred             CceEEEEEeCCCCc
Confidence             7999999999986

>KOG0587|consensus

Probab=99.38  E-value=4.6e-13  Score=142.72  Aligned_cols=165  Identities=18%  Similarity=0.248  Sum_probs=113.7

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .+||..|+++.-... -+.|+.+..|++.++.||.+||.+.+||||||-.|||+..++           .+|+       
T Consensus       104 ~gGSVTDLVKn~~g~-rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~-----------~VKL-------  164 (953)
T KOG0587|consen  104 GGGSVTDLVKNTKGN-RLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENA-----------EVKL-------  164 (953)
T ss_pred             CCccHHHHHhhhccc-chhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccC-----------cEEE-------
Confidence            479999999985532 479999999999999999999999999999999994444432           3333       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .|||++.-.+.                                               ..|              
T Consensus       165 -----vDFGvSaQlds-----------------------------------------------T~g--------------  178 (953)
T KOG0587|consen  165 -----VDFGVSAQLDS-----------------------------------------------TVG--------------  178 (953)
T ss_pred             -----eeeeeeeeeec-----------------------------------------------ccc--------------
Confidence                 45555531000                                               000              


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      +.....|++.||+||.++-.+..                     ...|+..+|+||+|++..||-- |.+|+..+.+...
T Consensus       179 rRnT~iGtP~WMAPEViac~e~~---------------------d~tyd~R~D~WsLGITaIElad-G~PPl~DmHPmra  236 (953)
T KOG0587|consen  179 RRNTFIGTPYWMAPEVIACDESP---------------------DATYDYRSDLWSLGITAIEMAE-GAPPLCDMHPMRA  236 (953)
T ss_pred             cccCcCCCcccccceeeecccCC---------------------CCCcccccchhhccceeehhcC-CCCCccCcchhhh
Confidence            00112367777777777644321                     1368899999999999999999 9999988877665


Q ss_pred             ccccccccccCC--CC------------CcCCCCCCHHHHHHHHcC
Q psy17476        242 VDRVQRGIILEK--PK------------AWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       242 ~~~i~~~~~~~~--p~------------~w~~~~~~R~~aeeLL~~  273 (513)
                      +-.|-...++..  |.            |.-.+...||...++|.+
T Consensus       237 LF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  237 LFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             hccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence            555543322221  22            344666788888888876

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.37  E-value=2.4e-13  Score=128.75  Aligned_cols=55  Identities=20%  Similarity=0.285  Sum_probs=47.2

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      ++|+|.+++......  +++..+..++.|++.++.|||.++++|+||+|+|++++.+
T Consensus        80 ~~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~  134 (225)
T smart00221       80 EGGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMD  134 (225)
T ss_pred             CCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence            567999999886532  5788999999999999999999999999999999665554

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1167|consensus

Probab=99.36  E-value=6.9e-13  Score=131.23  Aligned_cols=41  Identities=17%  Similarity=0.169  Sum_probs=36.4

Q ss_pred             CchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476         19 GNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus        19 ~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      ++...++.+++.+++||.++|.+|||||||||+|+|.+...
T Consensus       129 l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t  169 (418)
T KOG1167|consen  129 LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRT  169 (418)
T ss_pred             CCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccccc
Confidence            45679999999999999999999999999999997666653

>KOG0668|consensus

Probab=99.35  E-value=1.8e-13  Score=124.99  Aligned_cols=40  Identities=13%  Similarity=0.032  Sum_probs=35.1

Q ss_pred             CchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476         19 GNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus        19 ~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      ++.-.++.++.|+++||.|+||+||+|||+||.|+.|+..
T Consensus       129 l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~  168 (338)
T KOG0668|consen  129 LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHE  168 (338)
T ss_pred             hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechh
Confidence            4555789999999999999999999999999999666654

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.35  E-value=6e-13  Score=140.70  Aligned_cols=58  Identities=17%  Similarity=0.216  Sum_probs=45.4

Q ss_pred             CCCCcHHHHHHhcCCC---------------------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENT---------------------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~---------------------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      |++|+|.++|+.....                     ..+++..++.++.|++.||.|||+++|+||||||+||+++.+
T Consensus       267 ~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~  345 (507)
T PLN03224        267 ESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVD  345 (507)
T ss_pred             CCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCC
Confidence            5788999988753211                     023567889999999999999999999999999999554443

>KOG0615|consensus

Probab=99.32  E-value=3.4e-12  Score=125.86  Aligned_cols=81  Identities=20%  Similarity=0.259  Sum_probs=69.3

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC-----------HHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-----------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-----------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      -.+.|.+.+.||+|+||.|.+|..+.++..+|+|...+.           .....+|++||++|+|||||+++++++..+
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d  249 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD  249 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence            345688889999999999999999998888877743221           123578999999999999999999999999


Q ss_pred             eeEEEEccCCCC
Q psy17476        496 PIYIVTDTSSFR  507 (513)
Q Consensus       496 ~~~lV~E~~~~G  507 (513)
                      ..|||||||.||
T Consensus       250 s~YmVlE~v~GG  261 (475)
T KOG0615|consen  250 SSYMVLEYVEGG  261 (475)
T ss_pred             ceEEEEEEecCc
Confidence            999999999997

>KOG0600|consensus

Probab=99.31  E-value=8.2e-13  Score=133.21  Aligned_cols=85  Identities=22%  Similarity=0.389  Sum_probs=72.0

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCCH------HHHHHHHHHHhcCCCCceeceeeEEEeC--CeeE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSE------DDFIEEAKVMTRLQHQNLVQLYGVCSKH--RPIY  498 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~------~~f~~E~~il~~l~HpNIV~l~g~~~~~--~~~~  498 (513)
                      ..+.|+.+++||+|+||.||+++...+++++|+|....+.      .-..+||.||++|+|||||+|.++.++.  ..+|
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY  194 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY  194 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence            3456888899999999999999999988888877544433      2357899999999999999999999887  6899


Q ss_pred             EEEccCCCCcccc
Q psy17476        499 IVTDTSSFRLGLL  511 (513)
Q Consensus       499 lV~E~~~~Gl~~~  511 (513)
                      ||+|||+..|..|
T Consensus       195 lVFeYMdhDL~GL  207 (560)
T KOG0600|consen  195 LVFEYMDHDLSGL  207 (560)
T ss_pred             EEEecccchhhhh
Confidence            9999999999433

>KOG1026|consensus

Probab=99.31  E-value=9.2e-13  Score=140.76  Aligned_cols=86  Identities=34%  Similarity=0.539  Sum_probs=70.6

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeCc------eeeE--EeecCCC--CHHHHHHHHHHHhcCCCCceeceeeEE
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGS------IDVA--MMKEGTM--SEDDFIEEAKVMTRLQHQNLVQLYGVC  491 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~------~~v~--~~k~~~~--~~~~f~~E~~il~~l~HpNIV~l~g~~  491 (513)
                      ...++++.++++.+.||+|+||+||+|...+-      ..|+  ++|....  ..++|.+|+++|..++|||||+|+|+|
T Consensus       479 ~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC  558 (774)
T KOG1026|consen  479 KVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVC  558 (774)
T ss_pred             ceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE
Confidence            34589999999999999999999999987532      2233  3333222  235899999999999999999999999


Q ss_pred             EeCCeeEEEEccCCCC
Q psy17476        492 SKHRPIYIVTDTSSFR  507 (513)
Q Consensus       492 ~~~~~~~lV~E~~~~G  507 (513)
                      .+++++|+|+|||..|
T Consensus       559 ~~~~P~~MvFEYm~~G  574 (774)
T KOG1026|consen  559 REGDPLCMVFEYMDHG  574 (774)
T ss_pred             ccCCeeEEEEEecccc
Confidence            9999999999999875

>KOG1187|consensus

Probab=99.30  E-value=2.5e-12  Score=131.18  Aligned_cols=89  Identities=27%  Similarity=0.426  Sum_probs=73.5

Q ss_pred             CCCCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC---HHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      ++.++..-.+++|.....||+|+||.||+|...++..+++++.....   ..+|.+|+.+|.+++|||||+|+|||.+.+
T Consensus        65 fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~  144 (361)
T KOG1187|consen   65 FSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGG  144 (361)
T ss_pred             eeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCC
Confidence            34455566678888889999999999999999887555555533322   467999999999999999999999999988


Q ss_pred             -eeEEEEccCCCC
Q psy17476        496 -PIYIVTDTSSFR  507 (513)
Q Consensus       496 -~~~lV~E~~~~G  507 (513)
                       ..+||+|||++|
T Consensus       145 ~~~~LVYEym~nG  157 (361)
T KOG1187|consen  145 EHRLLVYEYMPNG  157 (361)
T ss_pred             ceEEEEEEccCCC
Confidence             499999999996

>KOG1094|consensus

Probab=99.27  E-value=2.1e-12  Score=132.09  Aligned_cols=84  Identities=32%  Similarity=0.580  Sum_probs=72.3

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC----CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM----SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~----~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      -+++++.+.+.+.||+|.||+|.+|.......||+++....    ...+|.+||++|.+|+|||||+|+|+|..++++++
T Consensus       533 ~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicm  612 (807)
T KOG1094|consen  533 VEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCM  612 (807)
T ss_pred             hhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHH
Confidence            37888999999999999999999999887556655543222    13689999999999999999999999999999999


Q ss_pred             EEccCCCC
Q psy17476        500 VTDTSSFR  507 (513)
Q Consensus       500 V~E~~~~G  507 (513)
                      |||||++|
T Consensus       613 I~EYmEnG  620 (807)
T KOG1094|consen  613 ITEYMENG  620 (807)
T ss_pred             HHHHHhcC
Confidence            99999986

>KOG0575|consensus

Probab=99.24  E-value=2.1e-11  Score=126.01  Aligned_cols=80  Identities=20%  Similarity=0.261  Sum_probs=70.5

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      ..|..++.||+|+|+.||+++...++.++|.|...       ...+...+||+|.++|+|||||+++++|++.+++|||.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            56899999999999999999997777777766433       23467899999999999999999999999999999999


Q ss_pred             ccCCCCc
Q psy17476        502 DTSSFRL  508 (513)
Q Consensus       502 E~~~~Gl  508 (513)
                      |+|++|.
T Consensus        98 ELC~~~s  104 (592)
T KOG0575|consen   98 ELCHRGS  104 (592)
T ss_pred             EecCCcc
Confidence            9999975

>KOG0196|consensus

Probab=99.23  E-value=6.9e-12  Score=132.20  Aligned_cols=87  Identities=33%  Similarity=0.601  Sum_probs=71.9

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCc----eeeE--EeecCCCC--HHHHHHHHHHHhcCCCCceeceeeEEEeCCe
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGS----IDVA--MMKEGTMS--EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~----~~v~--~~k~~~~~--~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  496 (513)
                      ||+.+.+.+.++||.|.||+|++|+++..    ..||  ++|..-..  ..+|+.|+.||-+++||||++|.|+.+...+
T Consensus       625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~P  704 (996)
T KOG0196|consen  625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKP  704 (996)
T ss_pred             hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCce
Confidence            78888999999999999999999998642    2233  33333322  3479999999999999999999999999999


Q ss_pred             eEEEEccCCCCc-ccc
Q psy17476        497 IYIVTDTSSFRL-GLL  511 (513)
Q Consensus       497 ~~lV~E~~~~Gl-~~~  511 (513)
                      +|||+|||++|- ..+
T Consensus       705 vMIiTEyMENGsLDsF  720 (996)
T KOG0196|consen  705 VMIITEYMENGSLDSF  720 (996)
T ss_pred             eEEEhhhhhCCcHHHH
Confidence            999999999985 443

>KOG0663|consensus

Probab=99.22  E-value=3.4e-12  Score=122.79  Aligned_cols=85  Identities=25%  Similarity=0.408  Sum_probs=73.5

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCCHH------HHHHHHHHHhcCCCCceeceeeEEEeC--CeeEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSED------DFIEEAKVMTRLQHQNLVQLYGVCSKH--RPIYIV  500 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~~------~f~~E~~il~~l~HpNIV~l~g~~~~~--~~~~lV  500 (513)
                      ++|+.+..|++|+||.||+|+.+.+..++|+|..+.+.+      .-++||.+|.+++|||||.+-.+..-.  +.+|||
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            578888999999999999999999999999887665543      358999999999999999999988643  579999


Q ss_pred             EccCCCCcccccC
Q psy17476        501 TDTSSFRLGLLAD  513 (513)
Q Consensus       501 ~E~~~~Gl~~~~~  513 (513)
                      ||||+..|.+|++
T Consensus       156 Me~~EhDLksl~d  168 (419)
T KOG0663|consen  156 MEYVEHDLKSLME  168 (419)
T ss_pred             HHHHHhhHHHHHH
Confidence            9999999977653

>KOG4257|consensus

Probab=99.21  E-value=1.4e-11  Score=126.74  Aligned_cols=85  Identities=26%  Similarity=0.568  Sum_probs=69.9

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeCc----eeeEEeecCCC-----CHHHHHHHHHHHhcCCCCceeceeeEEE
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGS----IDVAMMKEGTM-----SEDDFIEEAKVMTRLQHQNLVQLYGVCS  492 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~----~~v~~~k~~~~-----~~~~f~~E~~il~~l~HpNIV~l~g~~~  492 (513)
                      ..+++.++.+++.+.||+|.||.||+|.+...    ...+++|..+.     +.+.|++|+.+|++++|||||+|+|+|+
T Consensus       382 rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~  461 (974)
T KOG4257|consen  382 RNYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV  461 (974)
T ss_pred             CcceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee
Confidence            46789999999999999999999999998532    22234443322     2467999999999999999999999998


Q ss_pred             eCCeeEEEEccCCCC
Q psy17476        493 KHRPIYIVTDTSSFR  507 (513)
Q Consensus       493 ~~~~~~lV~E~~~~G  507 (513)
                      + .+++||||+++-|
T Consensus       462 e-~P~WivmEL~~~G  475 (974)
T KOG4257|consen  462 E-QPMWIVMELAPLG  475 (974)
T ss_pred             c-cceeEEEecccch
Confidence            6 6899999999876

>KOG0605|consensus

Probab=99.20  E-value=2.7e-11  Score=123.29  Aligned_cols=83  Identities=19%  Similarity=0.308  Sum_probs=74.8

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC-------HHHHHHHHHHHhcCCCCceeceeeEEEeCCee
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      .+..++|++++.||+|+||.||+++-++++.++|+|...++       .+....|-.||...++|+||+||..|.+.+++
T Consensus       137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L  216 (550)
T KOG0605|consen  137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL  216 (550)
T ss_pred             cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence            45678999999999999999999999999999998865543       24578899999999999999999999999999


Q ss_pred             EEEEccCCCC
Q psy17476        498 YIVTDTSSFR  507 (513)
Q Consensus       498 ~lV~E~~~~G  507 (513)
                      ||||||++||
T Consensus       217 YLiMEylPGG  226 (550)
T KOG0605|consen  217 YLIMEYLPGG  226 (550)
T ss_pred             EEEEEecCCc
Confidence            9999999998

>KOG1095|consensus

Probab=99.20  E-value=2.8e-11  Score=133.94  Aligned_cols=84  Identities=33%  Similarity=0.532  Sum_probs=69.4

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCc------eeeEEeecCCCC----HHHHHHHHHHHhcCCCCceeceeeEEEeC
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGS------IDVAMMKEGTMS----EDDFIEEAKVMTRLQHQNLVQLYGVCSKH  494 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~------~~v~~~k~~~~~----~~~f~~E~~il~~l~HpNIV~l~g~~~~~  494 (513)
                      +++.+.+++.+.||+|+||.||+|.+.+.      ..|++++.....    ..+|++|+.+|++++|||||+++|+|.+.
T Consensus       688 ~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~  767 (1025)
T KOG1095|consen  688 EVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS  767 (1025)
T ss_pred             cCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC
Confidence            36688899999999999999999998753      224444433221    34799999999999999999999999999


Q ss_pred             CeeEEEEccCCCCc
Q psy17476        495 RPIYIVTDTSSFRL  508 (513)
Q Consensus       495 ~~~~lV~E~~~~Gl  508 (513)
                      .+.+|++|||+||=
T Consensus       768 ~~~~i~leyM~gGD  781 (1025)
T KOG1095|consen  768 GPPLILLEYMEGGD  781 (1025)
T ss_pred             CCcEEEehhcccCc
Confidence            99999999999973

>KOG0591|consensus

Probab=99.17  E-value=9.8e-13  Score=123.75  Aligned_cols=81  Identities=22%  Similarity=0.378  Sum_probs=67.2

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC------CHHHHHHHHHHHhcCCCCceeceee-EEEeCCe-eE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM------SEDDFIEEAKVMTRLQHQNLVQLYG-VCSKHRP-IY  498 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~------~~~~f~~E~~il~~l~HpNIV~l~g-~~~~~~~-~~  498 (513)
                      ...+|+++++||.|+||.||++....++..+|.|....      ..++...|+.+|++|+|||||++|+ .+.++.. ++
T Consensus        17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln   96 (375)
T KOG0591|consen   17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN   96 (375)
T ss_pred             cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence            45689999999999999999999887777777664332      2357899999999999999999999 5555544 99


Q ss_pred             EEEccCCCC
Q psy17476        499 IVTDTSSFR  507 (513)
Q Consensus       499 lV~E~~~~G  507 (513)
                      ||||||.+|
T Consensus        97 ivmE~c~~G  105 (375)
T KOG0591|consen   97 IVMELCDAG  105 (375)
T ss_pred             HHHHhhccc
Confidence            999999886

>KOG0606|consensus

Probab=99.16  E-value=4.6e-12  Score=137.79  Aligned_cols=92  Identities=18%  Similarity=0.273  Sum_probs=71.3

Q ss_pred             CCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceeccccccccccCCCCCcCCCCCCHHHHHHHHc
Q psy17476        193 NGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILK  272 (513)
Q Consensus       193 ~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p~~w~~~~~~R~~aeeLL~  272 (513)
                      -|+|.+.|||+|....|+..+|+|++|+++||.+- |..||.+..+++++..+......-+...|...+..+..++.||.
T Consensus       219 cgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLV-gcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~  297 (1205)
T KOG0606|consen  219 CGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLV-GCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLR  297 (1205)
T ss_pred             cCCccccChhhhhhhccCCCccHHHHHHHHHHHhe-eeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHH
Confidence            37788888999999999999999999999999999 99999999999998888655444444466666777777777776


Q ss_pred             C-----CCCCceEEEeec
Q psy17476        273 Q-----EDKEGCFVVRNS  285 (513)
Q Consensus       273 ~-----~~~~g~fliR~s  285 (513)
                      +     ....|.|.+...
T Consensus       298 qnp~~Rlgt~ga~evk~h  315 (1205)
T KOG0606|consen  298 QNPLCRLGTGGALEVKQH  315 (1205)
T ss_pred             hChHhhcccchhhhhhhc
Confidence            5     223455555443

>KOG0581|consensus

Probab=99.16  E-value=5.1e-11  Score=116.60  Aligned_cols=84  Identities=20%  Similarity=0.252  Sum_probs=73.7

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC-----HHHHHHHHHHHhcCCCCceeceeeEEEeCC-eeE
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-----EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR-PIY  498 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-----~~~f~~E~~il~~l~HpNIV~l~g~~~~~~-~~~  498 (513)
                      .+..++++....||+|+.|.||++.++.+..++|+|.....     .+++.+|++|++.++|||||++||+|..+. .++
T Consensus        75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~is  154 (364)
T KOG0581|consen   75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEIS  154 (364)
T ss_pred             ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEE
Confidence            35566888899999999999999999999999998865222     357899999999999999999999999988 599


Q ss_pred             EEEccCCCCc
Q psy17476        499 IVTDTSSFRL  508 (513)
Q Consensus       499 lV~E~~~~Gl  508 (513)
                      |+||||.+|-
T Consensus       155 I~mEYMDgGS  164 (364)
T KOG0581|consen  155 ICMEYMDGGS  164 (364)
T ss_pred             eehhhcCCCC
Confidence            9999999985

>KOG0580|consensus

Probab=99.15  E-value=1.1e-11  Score=114.33  Aligned_cols=82  Identities=23%  Similarity=0.384  Sum_probs=72.1

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC-------HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      ..++|.+++.||+|.||.||.|+.+.+.-++++|...++       ..++.+|++|-+.|+||||+++||++.+...+||
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL   99 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL   99 (281)
T ss_pred             chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence            345899999999999999999999988888888853322       3568899999999999999999999999999999


Q ss_pred             EEccCCCCc
Q psy17476        500 VTDTSSFRL  508 (513)
Q Consensus       500 V~E~~~~Gl  508 (513)
                      ++||.++|-
T Consensus       100 ilEya~~ge  108 (281)
T KOG0580|consen  100 ILEYAPRGE  108 (281)
T ss_pred             EEEecCCch
Confidence            999999873

>KOG0593|consensus

Probab=99.15  E-value=8.4e-12  Score=118.66  Aligned_cols=79  Identities=22%  Similarity=0.396  Sum_probs=66.4

Q ss_pred             CceeEeEecccccceEEEEEEeCceeeEEeecC--CCC----HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG--TMS----EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       430 ~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~--~~~----~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      .|+.+..+|+|+||.||+|+.++++.++|+|.-  +.+    .+-.++|+++|++|+|||+|.|+.+|.....++||+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            466677899999999999999999888776631  111    23478999999999999999999999999999999999


Q ss_pred             CCCCc
Q psy17476        504 SSFRL  508 (513)
Q Consensus       504 ~~~Gl  508 (513)
                      |+.-+
T Consensus        83 ~dhTv   87 (396)
T KOG0593|consen   83 CDHTV   87 (396)
T ss_pred             cchHH
Confidence            97643

>KOG0597|consensus

Probab=99.15  E-value=1.3e-11  Score=126.06  Aligned_cols=81  Identities=25%  Similarity=0.417  Sum_probs=70.7

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC---H---HHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS---E---DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~---~---~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      ++|.+.+.||+|+||.||||+.+.+..++++|...+.   .   ..+.+|++|++.++|||||.++..|++..++++|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            3677788999999999999999999999888854332   2   348899999999999999999999999999999999


Q ss_pred             cCCCCcc
Q psy17476        503 TSSFRLG  509 (513)
Q Consensus       503 ~~~~Gl~  509 (513)
                      ||.|.|-
T Consensus        82 ~a~g~L~   88 (808)
T KOG0597|consen   82 YAVGDLF   88 (808)
T ss_pred             hhhhhHH
Confidence            9999773

>KOG0598|consensus

Probab=99.12  E-value=1.2e-10  Score=113.86  Aligned_cols=82  Identities=20%  Similarity=0.315  Sum_probs=72.8

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeE
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIY  498 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  498 (513)
                      +..++|++.+.||+|+||+||..+.+++.+++|+|...+       .......|..||.+++||+||+|+-.|.+.+.+|
T Consensus        22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy  101 (357)
T KOG0598|consen   22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY  101 (357)
T ss_pred             CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence            346799999999999999999999999999998885433       2345788999999999999999999999999999


Q ss_pred             EEEccCCCC
Q psy17476        499 IVTDTSSFR  507 (513)
Q Consensus       499 lV~E~~~~G  507 (513)
                      ||+||+.||
T Consensus       102 lVld~~~GG  110 (357)
T KOG0598|consen  102 LVLDYLNGG  110 (357)
T ss_pred             EEEeccCCc
Confidence            999999997

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.12  E-value=1.1e-10  Score=121.41  Aligned_cols=86  Identities=36%  Similarity=0.592  Sum_probs=70.5

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeCc-----eeeEEeecCCC-----CHHHHHHHHHHHhcCC-CCceeceeeE
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-----IDVAMMKEGTM-----SEDDFIEEAKVMTRLQ-HQNLVQLYGV  490 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~-----~~v~~~k~~~~-----~~~~f~~E~~il~~l~-HpNIV~l~g~  490 (513)
                      ..|+++.+.|++++.||+|+||.||+|.+...     ...+++|....     ..+.|.+|+.+|++++ |||||+++|+
T Consensus        30 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~  109 (400)
T cd05105          30 SRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGA  109 (400)
T ss_pred             CceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEE
Confidence            47889999999999999999999999987432     12234442221     1356899999999996 9999999999


Q ss_pred             EEeCCeeEEEEccCCCC
Q psy17476        491 CSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       491 ~~~~~~~~lV~E~~~~G  507 (513)
                      |.....+|||||||++|
T Consensus       110 ~~~~~~~~lv~Ey~~~g  126 (400)
T cd05105         110 CTKSGPIYIITEYCFYG  126 (400)
T ss_pred             EccCCceEEEEEecCCC
Confidence            99999999999999987

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0195|consensus

Probab=99.09  E-value=1.9e-11  Score=114.49  Aligned_cols=138  Identities=22%  Similarity=0.405  Sum_probs=93.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcc-eeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHN-YIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~-iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      ||.|||++.|+..... -++..++.+++.++|.||+|||+.. +|     |.-.|.+.+     ++.|+...++|.....
T Consensus       269 mp~gslynvlhe~t~v-vvd~sqav~faldiargmaflhslep~i-----pr~~lns~h-----vmidedltarismad~  337 (448)
T KOG0195|consen  269 MPFGSLYNVLHEQTSV-VVDHSQAVRFALDIARGMAFLHSLEPMI-----PRFYLNSKH-----VMIDEDLTARISMADT  337 (448)
T ss_pred             ccchHHHHHHhcCccE-EEecchHHHHHHHHHhhHHHHhhcchhh-----hhhhcccce-----EEecchhhhheecccc
Confidence            7899999999997654 3688899999999999999999974 44     223333332     5566666667644333


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                      .|++.+.                                                                         
T Consensus       338 kfsfqe~-------------------------------------------------------------------------  344 (448)
T KOG0195|consen  338 KFSFQEV-------------------------------------------------------------------------  344 (448)
T ss_pred             eeeeecc-------------------------------------------------------------------------
Confidence            3321110                                                                         


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccc---cccCccccceeeeeeeeecCCCCCCCC
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRF---SSKSDVWAYGVLMWEVFTCGKMPYGRL  236 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~Dvws~G~~l~el~t~g~~pf~~~  236 (513)
                           ...-++.+|+||.                          ++.++-   -.++|+|||++++||+.| .+.||...
T Consensus       345 -----gr~y~pawmspea--------------------------lqrkped~n~raadmwsfaillwel~t-revpfadl  392 (448)
T KOG0195|consen  345 -----GRAYSPAWMSPEA--------------------------LQRKPEDLNIRAADMWSFAILLWELNT-REVPFADL  392 (448)
T ss_pred             -----ccccCcccCCHHH--------------------------HhcCchhcchhhhhHHHHHHHHHHhhc-cccccccC
Confidence                 0011233444444                          333322   356899999999999999 99999999


Q ss_pred             Ccceecccc-ccccccCCC
Q psy17476        237 KNTEVVDRV-QRGIILEKP  254 (513)
Q Consensus       237 ~~~~~~~~i-~~~~~~~~p  254 (513)
                      ++.|.--+| .+|.|+..|
T Consensus       393 spmecgmkialeglrv~ip  411 (448)
T KOG0195|consen  393 SPMECGMKIALEGLRVHIP  411 (448)
T ss_pred             CchhhhhhhhhccccccCC
Confidence            988775555 567776655

>KOG0193|consensus

Probab=99.08  E-value=1.4e-10  Score=119.71  Aligned_cols=88  Identities=32%  Similarity=0.635  Sum_probs=77.6

Q ss_pred             CCCCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCCH---HHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSE---DDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~---~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      .+...|+|+.+++.++..||+|+||+||+|.|.+.++|.+++....+.   +.|.+|+.++++-+|.||+-++|+|...+
T Consensus       382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~  461 (678)
T KOG0193|consen  382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP  461 (678)
T ss_pred             ccccccccCHHHhhccceeccccccceeecccccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence            345689999999999999999999999999999988877777655543   57999999999999999999999999765


Q ss_pred             eeEEEEccCCCC
Q psy17476        496 PIYIVTDTSSFR  507 (513)
Q Consensus       496 ~~~lV~E~~~~G  507 (513)
                      . .||+.+|+|.
T Consensus       462 ~-AIiTqwCeGs  472 (678)
T KOG0193|consen  462 L-AIITQWCEGS  472 (678)
T ss_pred             e-eeeehhccCc
Confidence            5 9999999984

>KOG0590|consensus

Probab=99.07  E-value=1.9e-10  Score=124.45  Aligned_cols=52  Identities=17%  Similarity=0.121  Sum_probs=44.8

Q ss_pred             cHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          5 SLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         5 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      ||+.++.+...   +....+..+++|++.|++|||+.||.|||+||+|+++..++
T Consensus       406 Dlf~~~~~~~~---~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g  457 (601)
T KOG0590|consen  406 DLFSLVMSNGK---LTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENG  457 (601)
T ss_pred             HHHHHHhcccc---cchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCC
Confidence            88888888632   46668999999999999999999999999999997766665

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.06  E-value=7.4e-11  Score=109.51  Aligned_cols=54  Identities=26%  Similarity=0.386  Sum_probs=46.9

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccC
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSL   57 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~   57 (513)
                      ++++|.+++.....  .+++..+..++.+++.+|+|||+++++|+||+|.||+++.
T Consensus        74 ~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~  127 (215)
T cd00180          74 EGGSLKDLLKENEG--KLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS  127 (215)
T ss_pred             CCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeC
Confidence            46899999988642  3588899999999999999999999999999999966555

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0659|consensus

Probab=99.06  E-value=7.7e-11  Score=110.35  Aligned_cols=83  Identities=22%  Similarity=0.359  Sum_probs=68.4

Q ss_pred             CceeEeEecccccceEEEEEEeCceeeEEeecCCCC------HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       430 ~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      .|...+.||+|.||.||+|+...+++.+|+|.....      ....++|++.|+.++|+|||.|+++|...+.+.||+||
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            566778999999999999998877665554433222      23578999999999999999999999999999999999


Q ss_pred             CCCCccccc
Q psy17476        504 SSFRLGLLA  512 (513)
Q Consensus       504 ~~~Gl~~~~  512 (513)
                      |+..|..++
T Consensus        83 m~tdLe~vI   91 (318)
T KOG0659|consen   83 MPTDLEVVI   91 (318)
T ss_pred             ccccHHHHh
Confidence            998885544

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.06  E-value=1.9e-10  Score=118.79  Aligned_cols=86  Identities=27%  Similarity=0.471  Sum_probs=70.2

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEe-----CceeeEEeecCCC-----CHHHHHHHHHHHhcC-CCCceeceeeE
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWR-----GSIDVAMMKEGTM-----SEDDFIEEAKVMTRL-QHQNLVQLYGV  490 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~-----~~~~v~~~k~~~~-----~~~~f~~E~~il~~l-~HpNIV~l~g~  490 (513)
                      ..|.++.++|++.+.||+|+||.||+|++.     ++...+++|....     ..+.+.+|+.+|+.+ +|||||+++++
T Consensus        28 ~~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~  107 (375)
T cd05104          28 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGA  107 (375)
T ss_pred             cccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeee
Confidence            467888899999999999999999999753     2233445553221     234688999999999 89999999999


Q ss_pred             EEeCCeeEEEEccCCCC
Q psy17476        491 CSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       491 ~~~~~~~~lV~E~~~~G  507 (513)
                      |......++|||||+||
T Consensus       108 ~~~~~~~~lv~E~~~~g  124 (375)
T cd05104         108 CTVGGPTLVITEYCCYG  124 (375)
T ss_pred             eccCCcceeeehhccCC
Confidence            99999999999999986

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.05  E-value=5.9e-10  Score=109.11  Aligned_cols=83  Identities=27%  Similarity=0.376  Sum_probs=67.4

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeC---ceeeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceeeEEEeCCee
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~---~~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      +...+|++.+.||+|+||.||+|.++.   ....+++|....  +   ...|.+|+.+|++++|||||+++|++..++..
T Consensus         2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   81 (266)
T cd05064           2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM   81 (266)
T ss_pred             CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence            456789999999999999999998752   233445553221  1   24689999999999999999999999999999


Q ss_pred             EEEEccCCCCc
Q psy17476        498 YIVTDTSSFRL  508 (513)
Q Consensus       498 ~lV~E~~~~Gl  508 (513)
                      +|||||+++|.
T Consensus        82 ~lv~e~~~~~~   92 (266)
T cd05064          82 MIVTEYMSNGA   92 (266)
T ss_pred             EEEEEeCCCCc
Confidence            99999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0574|consensus

Probab=99.04  E-value=1.1e-11  Score=117.59  Aligned_cols=85  Identities=22%  Similarity=0.375  Sum_probs=73.7

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCC--CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccCC
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM--SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS  505 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~--~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~~  505 (513)
                      .+-|.+..+||+|+||.||++.++.++.|+++|....  +-+++.+|+.||++++.|+||++||.|-....++||||||.
T Consensus        32 EEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG  111 (502)
T KOG0574|consen   32 EEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG  111 (502)
T ss_pred             HHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence            3557788899999999999999999988888876544  45789999999999999999999999999999999999998


Q ss_pred             CCc-cccc
Q psy17476        506 FRL-GLLA  512 (513)
Q Consensus       506 ~Gl-~~~~  512 (513)
                      .|. +.++
T Consensus       112 AGSiSDI~  119 (502)
T KOG0574|consen  112 AGSISDIM  119 (502)
T ss_pred             CCcHHHHH
Confidence            775 5443

>KOG0611|consensus

Probab=99.04  E-value=6.5e-11  Score=116.42  Aligned_cols=80  Identities=25%  Similarity=0.333  Sum_probs=68.4

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC----HH---HHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS----ED---DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~----~~---~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      ...|.+.+.||+|.||+|-+++....++++++|...++    .+   .+.+|++||+.|+||||+++|.+|+..+.+.||
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv  131 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV  131 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence            35688888999999999999998777777777744332    23   467899999999999999999999999999999


Q ss_pred             EccCCCC
Q psy17476        501 TDTSSFR  507 (513)
Q Consensus       501 ~E~~~~G  507 (513)
                      |||..+|
T Consensus       132 MEYaS~G  138 (668)
T KOG0611|consen  132 MEYASGG  138 (668)
T ss_pred             EEecCCc
Confidence            9999987

>KOG4721|consensus

Probab=99.04  E-value=8.2e-11  Score=120.14  Aligned_cols=83  Identities=29%  Similarity=0.440  Sum_probs=70.7

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      .+.|+|+.+.+..++-||.|+-|.||+|+++.. .||++|....    =.-+|+.|++|+||||+.|.|+|+...-+|||
T Consensus       116 ~e~WeiPFe~IsELeWlGSGaQGAVF~Grl~ne-tVAVKKV~el----kETdIKHLRkLkH~NII~FkGVCtqsPcyCIi  190 (904)
T KOG4721|consen  116 EELWEIPFEEISELEWLGSGAQGAVFLGRLHNE-TVAVKKVREL----KETDIKHLRKLKHPNIITFKGVCTQSPCYCII  190 (904)
T ss_pred             hhhccCCHHHhhhhhhhccCcccceeeeeccCc-eehhHHHhhh----hhhhHHHHHhccCcceeeEeeeecCCceeEEe
Confidence            467999999999999999999999999998764 5666664321    12368889999999999999999999999999


Q ss_pred             EccCCCCc
Q psy17476        501 TDTSSFRL  508 (513)
Q Consensus       501 ~E~~~~Gl  508 (513)
                      ||||+.|=
T Consensus       191 MEfCa~Gq  198 (904)
T KOG4721|consen  191 MEFCAQGQ  198 (904)
T ss_pred             eecccccc
Confidence            99999873

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.04  E-value=3.4e-10  Score=114.91  Aligned_cols=85  Identities=27%  Similarity=0.513  Sum_probs=67.9

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeC-----ceeeEEeecCCC-----CHHHHHHHHHHHhcC-CCCceeceeeEE
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVAMMKEGTM-----SEDDFIEEAKVMTRL-QHQNLVQLYGVC  491 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-----~~~v~~~k~~~~-----~~~~f~~E~~il~~l-~HpNIV~l~g~~  491 (513)
                      .|+++.++|++.+.||+|+||.||+|.+..     ....+++|....     ....+.+|+.+|+++ +|||||+++++|
T Consensus         1 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   80 (338)
T cd05102           1 QWEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGAC   80 (338)
T ss_pred             CcccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence            378899999999999999999999998632     223455553321     124689999999999 899999999998


Q ss_pred             EeC-CeeEEEEccCCCC
Q psy17476        492 SKH-RPIYIVTDTSSFR  507 (513)
Q Consensus       492 ~~~-~~~~lV~E~~~~G  507 (513)
                      ... ..+++|||||++|
T Consensus        81 ~~~~~~~~lv~ey~~~g   97 (338)
T cd05102          81 TKPNGPLMVIVEFCKYG   97 (338)
T ss_pred             cCCCCceEEEEecCCCC
Confidence            764 4689999999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.04  E-value=3.5e-10  Score=117.69  Aligned_cols=87  Identities=36%  Similarity=0.597  Sum_probs=70.9

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeC-----ceeeEEeecCCC---C--HHHHHHHHHHHhcCC-CCceeceee
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVAMMKEGTM---S--EDDFIEEAKVMTRLQ-HQNLVQLYG  489 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-----~~~v~~~k~~~~---~--~~~f~~E~~il~~l~-HpNIV~l~g  489 (513)
                      ...|+++.+++.+.+.||+|+||.||+|.+.+     ....+++|....   .  .+.+++|+++|.++. |||||+++|
T Consensus        29 ~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~  108 (401)
T cd05107          29 DSAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLG  108 (401)
T ss_pred             CCcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence            34689999999999999999999999998753     222344442221   1  246889999999997 999999999


Q ss_pred             EEEeCCeeEEEEccCCCC
Q psy17476        490 VCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       490 ~~~~~~~~~lV~E~~~~G  507 (513)
                      +|.....++||||||++|
T Consensus       109 ~~~~~~~~~iv~E~~~~g  126 (401)
T cd05107         109 ACTKGGPIYIITEYCRYG  126 (401)
T ss_pred             EEccCCCcEEEEeccCCC
Confidence            999999999999999986

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0661|consensus

Probab=99.04  E-value=2e-11  Score=122.51  Aligned_cols=85  Identities=24%  Similarity=0.375  Sum_probs=72.5

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC---CHHHH--HHHHHHHhcCC-CCceeceeeEEEeCC-eeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM---SEDDF--IEEAKVMTRLQ-HQNLVQLYGVCSKHR-PIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~---~~~~f--~~E~~il~~l~-HpNIV~l~g~~~~~~-~~~lV~  501 (513)
                      +.|.+.++||.|+||.||+|+.+.+..++|+|..+.   +-++.  ++|+.-|++|+ |||||+|..++.+.+ .+|+||
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf   89 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF   89 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence            568888999999999999999988888787775432   23343  68999999998 999999999999887 999999


Q ss_pred             ccCCCCcccccC
Q psy17476        502 DTSSFRLGLLAD  513 (513)
Q Consensus       502 E~~~~Gl~~~~~  513 (513)
                      |||+..|..|++
T Consensus        90 E~Md~NLYqLmK  101 (538)
T KOG0661|consen   90 EFMDCNLYQLMK  101 (538)
T ss_pred             HhhhhhHHHHHh
Confidence            999999987764

>KOG0576|consensus

Probab=99.03  E-value=5.1e-11  Score=123.82  Aligned_cols=54  Identities=20%  Similarity=0.230  Sum_probs=44.1

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +|+|.+.-+--.   ++++.++..++++.++||+|||+.|=+|||||-.|||++..|
T Consensus        96 ggslQdiy~~Tg---plselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~g  149 (829)
T KOG0576|consen   96 GGSLQDIYHVTG---PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEG  149 (829)
T ss_pred             CCcccceeeecc---cchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccC
Confidence            567766443332   689999999999999999999999999999999996555554

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.02  E-value=9.2e-10  Score=111.57  Aligned_cols=82  Identities=21%  Similarity=0.267  Sum_probs=71.0

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC-----HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-----EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-----~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      +..++|+..+.||+|+||.||++....++..+++|.....     .+.+.+|+++|++++|||||++++++..++.+++|
T Consensus         2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (331)
T cd06649           2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   81 (331)
T ss_pred             CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            4567899999999999999999999877777776643321     24689999999999999999999999999999999


Q ss_pred             EccCCCC
Q psy17476        501 TDTSSFR  507 (513)
Q Consensus       501 ~E~~~~G  507 (513)
                      ||||++|
T Consensus        82 ~e~~~~~   88 (331)
T cd06649          82 MEHMDGG   88 (331)
T ss_pred             eecCCCC
Confidence            9999986

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.02  E-value=8.5e-10  Score=107.16  Aligned_cols=81  Identities=59%  Similarity=1.023  Sum_probs=67.5

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccC
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS  504 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~  504 (513)
                      +.++|++.+.||+|+||.||++.++....++++..  ......+|.+|+.+|++++||||+++++++...+..++||||+
T Consensus         2 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~   81 (256)
T cd05114           2 NPSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM   81 (256)
T ss_pred             CHHHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence            34678899999999999999998876544443332  2334568999999999999999999999999999999999999


Q ss_pred             CCC
Q psy17476        505 SFR  507 (513)
Q Consensus       505 ~~G  507 (513)
                      ++|
T Consensus        82 ~~~   84 (256)
T cd05114          82 ENG   84 (256)
T ss_pred             CCC
Confidence            987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.02  E-value=7.4e-10  Score=112.40  Aligned_cols=82  Identities=21%  Similarity=0.249  Sum_probs=70.4

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC-----HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-----EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-----~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      +..++|++.+.||+|+||.||++....+..++++|.....     .+.+.+|+++|++++|||||+++++|..++.++||
T Consensus         2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (333)
T cd06650           2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   81 (333)
T ss_pred             cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence            4567899999999999999999999877676666643221     24688999999999999999999999999999999


Q ss_pred             EccCCCC
Q psy17476        501 TDTSSFR  507 (513)
Q Consensus       501 ~E~~~~G  507 (513)
                      |||+++|
T Consensus        82 ~e~~~~~   88 (333)
T cd06650          82 MEHMDGG   88 (333)
T ss_pred             EecCCCC
Confidence            9999986

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0585|consensus

Probab=99.02  E-value=4.1e-10  Score=113.13  Aligned_cols=81  Identities=23%  Similarity=0.336  Sum_probs=68.3

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC------------------HHHHHHHHHHHhcCCCCceecee
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS------------------EDDFIEEAKVMTRLQHQNLVQLY  488 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~------------------~~~f~~E~~il~~l~HpNIV~l~  488 (513)
                      ...+|++.+.||+|+||+|.+++.....+++|+|...+.                  .+...+||.||++|+|||||+|+
T Consensus        95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li  174 (576)
T KOG0585|consen   95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI  174 (576)
T ss_pred             ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence            346899999999999999999999888888877732221                  24688999999999999999999


Q ss_pred             eEEEeC--CeeEEEEccCCCC
Q psy17476        489 GVCSKH--RPIYIVTDTSSFR  507 (513)
Q Consensus       489 g~~~~~--~~~~lV~E~~~~G  507 (513)
                      .+..+.  +.+|||+|||..|
T Consensus       175 EvLDDP~s~~~YlVley~s~G  195 (576)
T KOG0585|consen  175 EVLDDPESDKLYLVLEYCSKG  195 (576)
T ss_pred             EeecCcccCceEEEEEeccCC
Confidence            998764  5799999999976

>KOG0032|consensus

Probab=99.02  E-value=5.1e-10  Score=114.66  Aligned_cols=80  Identities=26%  Similarity=0.336  Sum_probs=68.5

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcCC-CCceeceeeEEEeCCeeEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRLQ-HQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l~-HpNIV~l~g~~~~~~~~~l  499 (513)
                      ...|++.+.||.|.||.||+++.+.++..+++|...+       +.+.+.+|+.||+++. |||||++++++++...++|
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            4578888999999999999999998766665553222       2357899999999998 9999999999999999999


Q ss_pred             EEccCCCC
Q psy17476        500 VTDTSSFR  507 (513)
Q Consensus       500 V~E~~~~G  507 (513)
                      |||+|.||
T Consensus       114 vmEL~~GG  121 (382)
T KOG0032|consen  114 VMELCEGG  121 (382)
T ss_pred             EEEecCCc
Confidence            99999987

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.01  E-value=8.7e-10  Score=107.35  Aligned_cols=84  Identities=44%  Similarity=0.714  Sum_probs=71.4

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeecC--CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG--TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~--~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      |.+..++|++.+.||+|+||.||+|...+...+++++..  ....+.+.+|+.++++++|+||+++++++...+..++||
T Consensus         1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05072           1 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT   80 (261)
T ss_pred             CcCchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence            778889999999999999999999997765555444322  223567999999999999999999999999999999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      ||+++|
T Consensus        81 e~~~~~   86 (261)
T cd05072          81 EYMAKG   86 (261)
T ss_pred             ecCCCC
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.01  E-value=8.2e-10  Score=114.24  Aligned_cols=78  Identities=19%  Similarity=0.211  Sum_probs=67.1

Q ss_pred             CceeEeEecccccceEEEEEEeCceeeEEeecCCCC-------HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       430 ~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      .|++.+.||+|+||.||++....+...+++|.....       .+.+.+|+.+|++++|||||++++++.+.+.+|||||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            578899999999999999999887777766643221       2358899999999999999999999999999999999


Q ss_pred             cCCCC
Q psy17476        503 TSSFR  507 (513)
Q Consensus       503 ~~~~G  507 (513)
                      ||+||
T Consensus        82 ~~~gg   86 (381)
T cd05626          82 YIPGG   86 (381)
T ss_pred             cCCCC
Confidence            99987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=98.99  E-value=1.4e-09  Score=108.64  Aligned_cols=82  Identities=28%  Similarity=0.503  Sum_probs=66.0

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeC----------------ceeeEEeecCCC--C---HHHHHHHHHHHhcCCCCce
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRG----------------SIDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNL  484 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~----------------~~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNI  484 (513)
                      ++..+|.+.+.||+|+||.||+|.+..                ....+++|....  .   ..+|.+|+.+|++++||||
T Consensus         2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni   81 (304)
T cd05096           2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNI   81 (304)
T ss_pred             CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCe
Confidence            356788999999999999999998643                222345553222  1   2468999999999999999


Q ss_pred             eceeeEEEeCCeeEEEEccCCCC
Q psy17476        485 VQLYGVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       485 V~l~g~~~~~~~~~lV~E~~~~G  507 (513)
                      |++++++...+..+||||||++|
T Consensus        82 v~~~~~~~~~~~~~lv~e~~~~~  104 (304)
T cd05096          82 IRLLGVCVDEDPLCMITEYMENG  104 (304)
T ss_pred             eEEEEEEecCCceEEEEecCCCC
Confidence            99999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=98.99  E-value=1.6e-09  Score=110.34  Aligned_cols=85  Identities=20%  Similarity=0.306  Sum_probs=69.3

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCce-eeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSI-DVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~-~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      +.+..++|++.+.||+|+||.||+|.++... ..+++|...       ...+.+.+|+.+|+.++|||||++++++.+++
T Consensus        25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~  104 (340)
T PTZ00426         25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES  104 (340)
T ss_pred             CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC
Confidence            4566788999999999999999999876543 344444221       12346889999999999999999999999999


Q ss_pred             eeEEEEccCCCCc
Q psy17476        496 PIYIVTDTSSFRL  508 (513)
Q Consensus       496 ~~~lV~E~~~~Gl  508 (513)
                      .+|||||||++|-
T Consensus       105 ~~~lv~Ey~~~g~  117 (340)
T PTZ00426        105 YLYLVLEFVIGGE  117 (340)
T ss_pred             EEEEEEeCCCCCc
Confidence            9999999999873

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=98.99  E-value=1.5e-09  Score=105.73  Aligned_cols=84  Identities=46%  Similarity=0.890  Sum_probs=70.7

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      |+++.++|++.+.||+|+||.||+|.+.....++++..  .....++|.+|+++|++++||||+++++++...+..|+||
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05068           1 WEIDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT   80 (261)
T ss_pred             CccchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence            67888999999999999999999999766544443332  2223567999999999999999999999999999999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      ||+++|
T Consensus        81 e~~~~~   86 (261)
T cd05068          81 ELMKYG   86 (261)
T ss_pred             ecccCC
Confidence            999765

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=98.99  E-value=1.5e-09  Score=109.91  Aligned_cols=80  Identities=20%  Similarity=0.301  Sum_probs=68.5

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      .++|.+.+.||+|+||.||+|..+.+...+++|...       ...+.+.+|+.+|++++|||||++++++..++.+|+|
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   96 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL   96 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence            468999999999999999999998776666666322       1234688999999999999999999999999999999


Q ss_pred             EccCCCC
Q psy17476        501 TDTSSFR  507 (513)
Q Consensus       501 ~E~~~~G  507 (513)
                      ||||++|
T Consensus        97 ~e~~~~~  103 (329)
T PTZ00263         97 LEFVVGG  103 (329)
T ss_pred             EcCCCCC
Confidence            9999986

>KOG0616|consensus

Probab=98.99  E-value=7.9e-10  Score=105.12  Aligned_cols=81  Identities=25%  Similarity=0.328  Sum_probs=72.3

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC-------HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      ..++|+..+.||.|+||+|.+.+.+.++..+|+|..++.       .+...+|.++|+.+.||++|+|++.|.+...+||
T Consensus        42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lym  121 (355)
T KOG0616|consen   42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYM  121 (355)
T ss_pred             chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEE
Confidence            446899999999999999999999998888888865443       2457889999999999999999999999999999


Q ss_pred             EEccCCCC
Q psy17476        500 VTDTSSFR  507 (513)
Q Consensus       500 V~E~~~~G  507 (513)
                      ||||++||
T Consensus       122 vmeyv~GG  129 (355)
T KOG0616|consen  122 VMEYVPGG  129 (355)
T ss_pred             EEeccCCc
Confidence            99999998

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.98  E-value=1.1e-09  Score=112.98  Aligned_cols=79  Identities=19%  Similarity=0.227  Sum_probs=67.3

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC-------HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      ++|.+.+.||+|+||.||++....++..+++|.....       .+.+.+|+++|++++|||||++++++.+...+||||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            3688899999999999999998877777766643221       235788999999999999999999999999999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      |||+||
T Consensus        81 E~~~gg   86 (377)
T cd05629          81 EFLPGG   86 (377)
T ss_pred             eCCCCC
Confidence            999886

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.98  E-value=1.3e-09  Score=112.85  Aligned_cols=78  Identities=19%  Similarity=0.235  Sum_probs=67.2

Q ss_pred             CceeEeEecccccceEEEEEEeCceeeEEeecCCCC-------HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       430 ~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      .|...+.||+|+||.||++....+...+++|.....       .+.+.+|+.+|++++|||||++++++.+++.+|||||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            578899999999999999999877777666643321       2357889999999999999999999999999999999


Q ss_pred             cCCCC
Q psy17476        503 TSSFR  507 (513)
Q Consensus       503 ~~~~G  507 (513)
                      ||++|
T Consensus        82 ~~~gg   86 (382)
T cd05625          82 YIPGG   86 (382)
T ss_pred             CCCCC
Confidence            99987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.97  E-value=1.5e-09  Score=111.97  Aligned_cols=80  Identities=18%  Similarity=0.202  Sum_probs=68.5

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      ++|++.+.||+|+||.||++....++..+++|....       ..+.+.+|+++|++++||||+++++.+.+++.+||||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            368899999999999999999887777777764322       2345789999999999999999999999999999999


Q ss_pred             ccCCCCc
Q psy17476        502 DTSSFRL  508 (513)
Q Consensus       502 E~~~~Gl  508 (513)
                      |||++|-
T Consensus        81 E~~~~g~   87 (376)
T cd05598          81 DYIPGGD   87 (376)
T ss_pred             eCCCCCc
Confidence            9999873

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=98.97  E-value=7.3e-10  Score=114.35  Aligned_cols=88  Identities=27%  Similarity=0.528  Sum_probs=71.3

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCc-----eeeEEeecCCC--C---HHHHHHHHHHHhcC-CCCceeceee
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-----IDVAMMKEGTM--S---EDDFIEEAKVMTRL-QHQNLVQLYG  489 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~-----~~v~~~k~~~~--~---~~~f~~E~~il~~l-~HpNIV~l~g  489 (513)
                      ...|.++.++|++.+.||+|+||.||++.+...     ...+++|....  .   .+.+.+|+.+|+.+ +|+|||++++
T Consensus        30 ~~~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~  109 (374)
T cd05106          30 NEKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLG  109 (374)
T ss_pred             cccccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEee
Confidence            356888999999999999999999999986432     22345553221  1   24588999999999 8999999999


Q ss_pred             EEEeCCeeEEEEccCCCCc
Q psy17476        490 VCSKHRPIYIVTDTSSFRL  508 (513)
Q Consensus       490 ~~~~~~~~~lV~E~~~~Gl  508 (513)
                      +|....++++|||||++|-
T Consensus       110 ~~~~~~~~~lv~ey~~~g~  128 (374)
T cd05106         110 ACTHGGPVLVITEYCCYGD  128 (374)
T ss_pred             EecCCCCeEEeHhhccCCc
Confidence            9999999999999999863

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.97  E-value=1.6e-09  Score=111.32  Aligned_cols=79  Identities=16%  Similarity=0.241  Sum_probs=67.4

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      ++|++.+.||+|+||.||++....++..+++|....       ....+.+|+.+|+.++||||+++++++.+++.+||||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            368899999999999999999987766666664322       1235778999999999999999999999999999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      |||+||
T Consensus        81 E~~~~g   86 (364)
T cd05599          81 EYLPGG   86 (364)
T ss_pred             CCCCCc
Confidence            999987

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.96  E-value=1.5e-09  Score=107.56  Aligned_cols=82  Identities=22%  Similarity=0.344  Sum_probs=69.0

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-----CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-----SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-----~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      .++|++.+.||+|+||.||+|..+.++..+++|....     ....+.+|++++++++||||+++++++..+...++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE   83 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence            3578999999999999999999887766666663221     23467899999999999999999999999899999999


Q ss_pred             cCCCCcc
Q psy17476        503 TSSFRLG  509 (513)
Q Consensus       503 ~~~~Gl~  509 (513)
                      |+++.|.
T Consensus        84 ~~~~~l~   90 (288)
T cd07871          84 YLDSDLK   90 (288)
T ss_pred             CCCcCHH
Confidence            9998763

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.96  E-value=2.5e-09  Score=103.99  Aligned_cols=84  Identities=50%  Similarity=0.869  Sum_probs=71.5

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      |+++.++|.+.+.||+|+||.||++...+...++++..  .....+++.+|+.++++++|+||+++++++......++||
T Consensus         1 ~~~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (261)
T cd05034           1 WEIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT   80 (261)
T ss_pred             CccchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence            77889999999999999999999999876544443332  2334578999999999999999999999999888999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      ||+++|
T Consensus        81 e~~~~~   86 (261)
T cd05034          81 EYMSKG   86 (261)
T ss_pred             eccCCC
Confidence            999886

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG1164|consensus

Probab=98.96  E-value=4e-10  Score=113.80  Aligned_cols=56  Identities=20%  Similarity=0.218  Sum_probs=47.0

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      -|-||.++....... .++..++..++.|++.+|.+||+.|+|||||||+|+.+...
T Consensus       103 ~G~sL~dl~~~~~~~-~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~  158 (322)
T KOG1164|consen  103 LGPSLEDLRKRNPPG-RFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQS  158 (322)
T ss_pred             cCccHHHHHHhCCCC-CcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCC
Confidence            467899988776522 36888999999999999999999999999999999665554

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=98.96  E-value=1.5e-09  Score=105.88  Aligned_cols=84  Identities=35%  Similarity=0.735  Sum_probs=72.4

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC---CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM---SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~---~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      |++...++.+.+.||+|+||.||+|.+++....+++|....   ...++.+|++++++++||||+++++++.....+++|
T Consensus         1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (263)
T cd05052           1 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII   80 (263)
T ss_pred             CCCchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEE
Confidence            67788899999999999999999999987666666664322   235789999999999999999999999999999999


Q ss_pred             EccCCCC
Q psy17476        501 TDTSSFR  507 (513)
Q Consensus       501 ~E~~~~G  507 (513)
                      |||+++|
T Consensus        81 ~e~~~~~   87 (263)
T cd05052          81 TEFMTYG   87 (263)
T ss_pred             EEeCCCC
Confidence            9999876

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.96  E-value=1.7e-09  Score=106.87  Aligned_cols=79  Identities=19%  Similarity=0.400  Sum_probs=67.6

Q ss_pred             CceeEeEecccccceEEEEEEeCceeeEEeecCC------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       430 ~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      +|++.+.||+|+||.||+++.+.+...+++|...      ...+.+.+|+.+|++++||||+++++++...+.+|+||||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY   81 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence            6888999999999999999998776666655321      1234688999999999999999999999999999999999


Q ss_pred             CCCCc
Q psy17476        504 SSFRL  508 (513)
Q Consensus       504 ~~~Gl  508 (513)
                      |++|+
T Consensus        82 ~~~~~   86 (287)
T cd07848          82 VEKNM   86 (287)
T ss_pred             CCCCH
Confidence            99986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.95  E-value=2.3e-09  Score=107.14  Aligned_cols=81  Identities=23%  Similarity=0.321  Sum_probs=68.5

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-----CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-----SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-----~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      .++|++.+.||+|+||.||+|..+.++..+++|....     ....+.+|+.+|++++|||||++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            3679999999999999999999886666666563221     12357899999999999999999999999999999999


Q ss_pred             cCCCCc
Q psy17476        503 TSSFRL  508 (513)
Q Consensus       503 ~~~~Gl  508 (513)
                      ||+++|
T Consensus        84 ~~~~~l   89 (303)
T cd07869          84 YVHTDL   89 (303)
T ss_pred             CCCcCH
Confidence            999877

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=98.94  E-value=2.4e-09  Score=104.15  Aligned_cols=81  Identities=65%  Similarity=1.095  Sum_probs=67.3

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccC
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS  504 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~  504 (513)
                      +.++|++.+.||+|+||.||+|.+.+...++++..  .....++|.+|+.++++++||||+++++++....++++||||+
T Consensus         2 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd05113           2 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM   81 (256)
T ss_pred             ChHHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence            34678999999999999999998876544443332  2234567999999999999999999999999999999999999


Q ss_pred             CCC
Q psy17476        505 SFR  507 (513)
Q Consensus       505 ~~G  507 (513)
                      ++|
T Consensus        82 ~~~   84 (256)
T cd05113          82 SNG   84 (256)
T ss_pred             CCC
Confidence            987

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=98.94  E-value=2.7e-09  Score=109.21  Aligned_cols=83  Identities=17%  Similarity=0.159  Sum_probs=69.0

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      ...++|+..+.||+|+||.||++.+..++..+++|....  .   ...+.+|+++|++++|+|||++++++.....+++|
T Consensus        71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  150 (353)
T PLN00034         71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVL  150 (353)
T ss_pred             CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEE
Confidence            345678888999999999999999886666666664321  1   24688999999999999999999999999999999


Q ss_pred             EccCCCCc
Q psy17476        501 TDTSSFRL  508 (513)
Q Consensus       501 ~E~~~~Gl  508 (513)
                      ||||++|.
T Consensus       151 ~e~~~~~~  158 (353)
T PLN00034        151 LEFMDGGS  158 (353)
T ss_pred             EecCCCCc
Confidence            99999874

>KOG0199|consensus

Probab=98.94  E-value=2.7e-10  Score=119.00  Aligned_cols=84  Identities=38%  Similarity=0.703  Sum_probs=68.8

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeCc----eeeEEee---cCCC--CHHHHHHHHHHHhcCCCCceeceeeEEEe
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGS----IDVAMMK---EGTM--SEDDFIEEAKVMTRLQHQNLVQLYGVCSK  493 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~----~~v~~~k---~~~~--~~~~f~~E~~il~~l~HpNIV~l~g~~~~  493 (513)
                      ...|+.+++.+.+.||+|+||.|++|.|...    +.| ++|   ....  ...+|++|+.+|.+|+|||+|+|||+..+
T Consensus       104 kclIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~V-AVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~  182 (1039)
T KOG0199|consen  104 KCLIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNV-AVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD  182 (1039)
T ss_pred             ceeccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeE-EEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc
Confidence            3467788999999999999999999999742    222 334   2222  34689999999999999999999999987


Q ss_pred             CCeeEEEEccCCCCc
Q psy17476        494 HRPIYIVTDTSSFRL  508 (513)
Q Consensus       494 ~~~~~lV~E~~~~Gl  508 (513)
                       .+++||||+++.|.
T Consensus       183 -qp~mMV~ELaplGS  196 (1039)
T KOG0199|consen  183 -QPAMMVFELAPLGS  196 (1039)
T ss_pred             -chhhHHhhhcccch
Confidence             78999999999874

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.94  E-value=2.3e-09  Score=110.42  Aligned_cols=84  Identities=21%  Similarity=0.290  Sum_probs=71.4

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCe
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  496 (513)
                      +.+..++|++.+.||+|+||.||++....++..+++|....       ....+.+|+.+|+.++||||+++++++.++..
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~  117 (370)
T cd05596          38 LRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKY  117 (370)
T ss_pred             CCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence            45567889999999999999999999987777776664321       12347889999999999999999999999999


Q ss_pred             eEEEEccCCCC
Q psy17476        497 IYIVTDTSSFR  507 (513)
Q Consensus       497 ~~lV~E~~~~G  507 (513)
                      +|||||||+||
T Consensus       118 ~~lv~Ey~~gg  128 (370)
T cd05596         118 LYMVMEYMPGG  128 (370)
T ss_pred             EEEEEcCCCCC
Confidence            99999999987

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0582|consensus

Probab=98.93  E-value=4.3e-09  Score=105.23  Aligned_cols=88  Identities=17%  Similarity=0.220  Sum_probs=78.0

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC-----HHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-----EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-----~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      ...|-+..++|.+..+||.|.-+.||+|++..+..++++|....+     .+.+.+|+..|+.++|||||+++..|..+.
T Consensus        18 ~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~   97 (516)
T KOG0582|consen   18 EKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS   97 (516)
T ss_pred             cccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecc
Confidence            456778889999999999999999999999888888888854332     356889999999999999999999999999


Q ss_pred             eeEEEEccCCCCc
Q psy17476        496 PIYIVTDTSSFRL  508 (513)
Q Consensus       496 ~~~lV~E~~~~Gl  508 (513)
                      .+++||.||.+|.
T Consensus        98 ~LWvVmpfMa~GS  110 (516)
T KOG0582|consen   98 ELWVVMPFMAGGS  110 (516)
T ss_pred             eeEEeehhhcCCc
Confidence            9999999999986

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.93  E-value=2.2e-09  Score=110.29  Aligned_cols=80  Identities=16%  Similarity=0.190  Sum_probs=67.8

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC-------HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      ++|++.+.||+|+||.||++....++..+++|.....       ...+.+|+.+|++++|||||++++++.+...+||||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            4688899999999999999998877666766643321       235788999999999999999999999999999999


Q ss_pred             ccCCCCc
Q psy17476        502 DTSSFRL  508 (513)
Q Consensus       502 E~~~~Gl  508 (513)
                      |||+||-
T Consensus        81 E~~~gg~   87 (363)
T cd05628          81 EFLPGGD   87 (363)
T ss_pred             cCCCCCc
Confidence            9999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.93  E-value=2.1e-09  Score=110.73  Aligned_cols=83  Identities=22%  Similarity=0.299  Sum_probs=70.4

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCee
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      .+..++|++.+.||+|+||.||++....+...+++|....       ..+.+.+|+.+++.++|||||++++++..+..+
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            4456789999999999999999999988777776664321       123578899999999999999999999999999


Q ss_pred             EEEEccCCCC
Q psy17476        498 YIVTDTSSFR  507 (513)
Q Consensus       498 ~lV~E~~~~G  507 (513)
                      |+|||||++|
T Consensus       119 ~lv~Ey~~gg  128 (370)
T cd05621         119 YMVMEYMPGG  128 (370)
T ss_pred             EEEEcCCCCC
Confidence            9999999986

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.93  E-value=2.9e-09  Score=107.91  Aligned_cols=78  Identities=17%  Similarity=0.283  Sum_probs=66.7

Q ss_pred             CceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       430 ~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      +|++.+.||+|+||.||+|....++..+++|....       ....+.+|+.+|++++||||+++++++...+.+|||||
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   81 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME   81 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence            68899999999999999999987666666663221       12468899999999999999999999999999999999


Q ss_pred             cCCCC
Q psy17476        503 TSSFR  507 (513)
Q Consensus       503 ~~~~G  507 (513)
                      ||+||
T Consensus        82 ~~~g~   86 (333)
T cd05600          82 YVPGG   86 (333)
T ss_pred             CCCCC
Confidence            99986

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=98.93  E-value=3e-09  Score=105.40  Aligned_cols=85  Identities=33%  Similarity=0.532  Sum_probs=69.1

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCc-----eeeEEeecCCCC-----HHHHHHHHHHHhcCCCCceeceeeEEEe
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGS-----IDVAMMKEGTMS-----EDDFIEEAKVMTRLQHQNLVQLYGVCSK  493 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~-----~~v~~~k~~~~~-----~~~f~~E~~il~~l~HpNIV~l~g~~~~  493 (513)
                      |++..++|++.+.||+|+||.||+|..++.     ...+++|.....     ...+.+|+.+|+.++||||+++++++..
T Consensus         1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   80 (288)
T cd05061           1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSK   80 (288)
T ss_pred             CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence            788899999999999999999999986531     223455532211     2358899999999999999999999999


Q ss_pred             CCeeEEEEccCCCCc
Q psy17476        494 HRPIYIVTDTSSFRL  508 (513)
Q Consensus       494 ~~~~~lV~E~~~~Gl  508 (513)
                      ....|+||||+++|-
T Consensus        81 ~~~~~lv~e~~~~g~   95 (288)
T cd05061          81 GQPTLVVMELMAHGD   95 (288)
T ss_pred             CCCcEEEEeCCCCCC
Confidence            999999999998753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=98.93  E-value=3.2e-09  Score=103.35  Aligned_cols=83  Identities=42%  Similarity=0.755  Sum_probs=68.9

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      |++..++|++.+.||+|+||.||++...+...++++..  .......|.+|+.+|++++|+||+++++++. .+..++||
T Consensus         1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~   79 (260)
T cd05067           1 WEVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT   79 (260)
T ss_pred             CccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence            78889999999999999999999998776555444332  2334568999999999999999999999875 46789999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      ||+++|
T Consensus        80 e~~~~~   85 (260)
T cd05067          80 EYMENG   85 (260)
T ss_pred             EcCCCC
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.92  E-value=1.5e-09  Score=107.97  Aligned_cols=79  Identities=20%  Similarity=0.303  Sum_probs=67.0

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      ++|++.+.||+|+||.||++....++..+++|....       ..+.+.+|+.+|++++||||+++++++.+...+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            367889999999999999999987666666664321       1245888999999999999999999999999999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      ||+++|
T Consensus        81 e~~~~~   86 (291)
T cd05612          81 EYVPGG   86 (291)
T ss_pred             eCCCCC
Confidence            999986

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0577|consensus

Probab=98.92  E-value=1.5e-10  Score=118.68  Aligned_cols=83  Identities=22%  Similarity=0.335  Sum_probs=69.9

Q ss_pred             CceeEeEecccccceEEEEEEeCceeeEEeecCCCC----H---HHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS----E---DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       430 ~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~----~---~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      -|.-++.||.|+||.||-++...+..|+++|....+    .   ++++.|+++|++++|||+|.+.|+|..+...+||||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            355567899999999999999888788777754433    2   468999999999999999999999999999999999


Q ss_pred             cCCCCccccc
Q psy17476        503 TSSFRLGLLA  512 (513)
Q Consensus       503 ~~~~Gl~~~~  512 (513)
                      ||-|.-+.|+
T Consensus       107 YClGSAsDll  116 (948)
T KOG0577|consen  107 YCLGSASDLL  116 (948)
T ss_pred             HHhccHHHHH
Confidence            9998766554

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=98.92  E-value=3.3e-09  Score=103.54  Aligned_cols=76  Identities=30%  Similarity=0.695  Sum_probs=58.6

Q ss_pred             eeEeEecccccceEEEEEEe----CceeeEEeecC-C-CC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        432 MLLEELGSGQFGVVRRGKWR----GSIDVAMMKEG-T-MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       432 ~~~~~lG~G~fG~V~~g~~~----~~~~v~~~k~~-~-~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      .+.+.||.|+||.||+|.+.    .....+++|.. . ..   .+.|.+|+++|++++||||++++|+|...++.++|||
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence            56789999999999999998    22233344422 1 22   3579999999999999999999999998888999999


Q ss_pred             cCCCC
Q psy17476        503 TSSFR  507 (513)
Q Consensus       503 ~~~~G  507 (513)
                      ||++|
T Consensus        82 ~~~~g   86 (259)
T PF07714_consen   82 YCPGG   86 (259)
T ss_dssp             --TTE
T ss_pred             ccccc
Confidence            99976

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=98.91  E-value=4.3e-09  Score=105.50  Aligned_cols=79  Identities=25%  Similarity=0.260  Sum_probs=67.5

Q ss_pred             CceeEeEecccccceEEEEEEeCceeeEEeecCCCC-----HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccC
Q psy17476        430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-----EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS  504 (513)
Q Consensus       430 ~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-----~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~  504 (513)
                      +|++.+.||+|+||.||++.+..++.++++|.....     ...+.+|+++|++++||||+++++++..++.+++||||+
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~   81 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM   81 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence            688899999999999999998877777766643221     245889999999999999999999999999999999999


Q ss_pred             CCCc
Q psy17476        505 SFRL  508 (513)
Q Consensus       505 ~~Gl  508 (513)
                      ++|.
T Consensus        82 ~~~~   85 (308)
T cd06615          82 DGGS   85 (308)
T ss_pred             CCCc
Confidence            9853

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=98.91  E-value=3.6e-09  Score=103.90  Aligned_cols=84  Identities=30%  Similarity=0.557  Sum_probs=69.6

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCce-----eeEEeecCCCC-----HHHHHHHHHHHhcCCCCceeceeeEEEe
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSI-----DVAMMKEGTMS-----EDDFIEEAKVMTRLQHQNLVQLYGVCSK  493 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~-----~v~~~k~~~~~-----~~~f~~E~~il~~l~HpNIV~l~g~~~~  493 (513)
                      |++..++|++.+.||+|+||.||+|..+...     ..+++|.....     ...|.+|+.+|+.++||||+++++++..
T Consensus         1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~   80 (277)
T cd05032           1 WELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVST   80 (277)
T ss_pred             CccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC
Confidence            6788899999999999999999999886432     34455532211     2468899999999999999999999999


Q ss_pred             CCeeEEEEccCCCC
Q psy17476        494 HRPIYIVTDTSSFR  507 (513)
Q Consensus       494 ~~~~~lV~E~~~~G  507 (513)
                      ....++||||+++|
T Consensus        81 ~~~~~~v~e~~~~~   94 (277)
T cd05032          81 GQPTLVVMELMAKG   94 (277)
T ss_pred             CCCcEEEEecCCCC
Confidence            99999999999865

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>KOG0586|consensus

Probab=98.91  E-value=2.4e-09  Score=111.00  Aligned_cols=80  Identities=20%  Similarity=0.325  Sum_probs=69.4

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC------HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      ..|.+.+.||+|.|++|..+++..+..-+++|..+++      .+.+.+|+++|..|+|||||+|+.+.+....+|+|||
T Consensus        56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~e  135 (596)
T KOG0586|consen   56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVME  135 (596)
T ss_pred             cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEE
Confidence            4678889999999999999999887777777754443      2458899999999999999999999999999999999


Q ss_pred             cCCCCc
Q psy17476        503 TSSFRL  508 (513)
Q Consensus       503 ~~~~Gl  508 (513)
                      |+.+|-
T Consensus       136 ya~~ge  141 (596)
T KOG0586|consen  136 YASGGE  141 (596)
T ss_pred             eccCch
Confidence            999874

>KOG0198|consensus

Probab=98.91  E-value=1.6e-09  Score=107.08  Aligned_cols=80  Identities=23%  Similarity=0.334  Sum_probs=67.1

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC----HHHHHHHHHHHhcCCCCceeceeeEEEeCC--eeEEEEc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS----EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR--PIYIVTD  502 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~----~~~f~~E~~il~~l~HpNIV~l~g~~~~~~--~~~lV~E  502 (513)
                      .++..++.||+|+||.||++...+++...++|.....    .+.+.+|+++|++++|||||+++|.....+  .++|.||
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            4567788999999999999999887677777755444    456899999999999999999999855544  6999999


Q ss_pred             cCCCCc
Q psy17476        503 TSSFRL  508 (513)
Q Consensus       503 ~~~~Gl  508 (513)
                      |+++|-
T Consensus        97 y~~~Gs  102 (313)
T KOG0198|consen   97 YAPGGS  102 (313)
T ss_pred             ccCCCc
Confidence            999975

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=98.90  E-value=3.9e-09  Score=103.03  Aligned_cols=83  Identities=48%  Similarity=0.771  Sum_probs=68.5

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeecC--CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG--TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~--~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      |+++..+|++.+.||+|+||.||+|.+.++..+++++..  ....+.|.+|++++++++||||+++++.+.. ...++||
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~   79 (262)
T cd05071           1 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT   79 (262)
T ss_pred             CCCChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEE
Confidence            677888999999999999999999988776554443332  2335679999999999999999999998754 5689999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      ||+++|
T Consensus        80 e~~~~~   85 (262)
T cd05071          80 EYMSKG   85 (262)
T ss_pred             EcCCCC
Confidence            999986

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.90  E-value=3.4e-09  Score=109.26  Aligned_cols=84  Identities=21%  Similarity=0.287  Sum_probs=71.6

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCe
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  496 (513)
                      +++..++|++.+.||+|+||.||++..+.+...+++|....       ..+.+.+|+.+|+.++||||+++++++..+..
T Consensus        38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (371)
T cd05622          38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY  117 (371)
T ss_pred             cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence            45566899999999999999999999988777777664321       12357889999999999999999999999999


Q ss_pred             eEEEEccCCCC
Q psy17476        497 IYIVTDTSSFR  507 (513)
Q Consensus       497 ~~lV~E~~~~G  507 (513)
                      +|+|||||+||
T Consensus       118 ~~lv~Ey~~gg  128 (371)
T cd05622         118 LYMVMEYMPGG  128 (371)
T ss_pred             EEEEEcCCCCC
Confidence            99999999987

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0583|consensus

Probab=98.90  E-value=3.3e-09  Score=108.59  Aligned_cols=81  Identities=28%  Similarity=0.352  Sum_probs=67.1

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC---------CHHHHHHHHHHHhcCC-CCceeceeeEEEeCCe
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM---------SEDDFIEEAKVMTRLQ-HQNLVQLYGVCSKHRP  496 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~---------~~~~f~~E~~il~~l~-HpNIV~l~g~~~~~~~  496 (513)
                      ....|.+++.||+|+||+|+.|.+..++..+++|....         ..+.+.+|+.+|++++ ||||++++.++.....
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~   94 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK   94 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence            45679999999999999999999887656555553222         1234568999999999 9999999999999999


Q ss_pred             eEEEEccCCCC
Q psy17476        497 IYIVTDTSSFR  507 (513)
Q Consensus       497 ~~lV~E~~~~G  507 (513)
                      +|||||||.||
T Consensus        95 ~~ivmEy~~gG  105 (370)
T KOG0583|consen   95 IYIVMEYCSGG  105 (370)
T ss_pred             EEEEEEecCCc
Confidence            99999999984

>KOG0694|consensus

Probab=98.90  E-value=3.5e-09  Score=111.10  Aligned_cols=84  Identities=19%  Similarity=0.305  Sum_probs=72.8

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcC-CCCceeceeeEEEeCCe
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRL-QHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~  496 (513)
                      .+..++|.++++||+|+||+|+++..+.+..++|+|..++       +.+..+.|.+|+... +||.+++|+.+|.+.++
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            4566789999999999999999999999888887774332       235688899998877 59999999999999999


Q ss_pred             eEEEEccCCCCc
Q psy17476        497 IYIVTDTSSFRL  508 (513)
Q Consensus       497 ~~lV~E~~~~Gl  508 (513)
                      +|+||||+.||-
T Consensus       444 l~fvmey~~Ggd  455 (694)
T KOG0694|consen  444 LFFVMEYVAGGD  455 (694)
T ss_pred             EEEEEEecCCCc
Confidence            999999999985

>KOG0610|consensus

Probab=98.89  E-value=1.1e-09  Score=108.65  Aligned_cols=83  Identities=22%  Similarity=0.258  Sum_probs=72.4

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCCH-------HHHHHHHHHHhcCCCCceeceeeEEEeCCee
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSE-------DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~-------~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      .+...+|++.+.||.|.-|.||++..+++...+|+|..++..       .....|-+||+.++||.++.||+.++.+...
T Consensus        73 ~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~  152 (459)
T KOG0610|consen   73 SLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYS  152 (459)
T ss_pred             ccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecccee
Confidence            455678889999999999999999999988888888655432       2356699999999999999999999999999


Q ss_pred             EEEEccCCCC
Q psy17476        498 YIVTDTSSFR  507 (513)
Q Consensus       498 ~lV~E~~~~G  507 (513)
                      |+|||||+||
T Consensus       153 cl~meyCpGG  162 (459)
T KOG0610|consen  153 CLVMEYCPGG  162 (459)
T ss_pred             EEEEecCCCc
Confidence            9999999997

>smart00252 SH2 Src homology 2 domains

Probab=98.89  E-value=9.5e-09  Score=82.11  Aligned_cols=80  Identities=41%  Similarity=0.691  Sum_probs=64.5

Q ss_pred             CcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       256 ~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      +|+++.++|..|+++|... .+|+|+||.+.+ .+.|++|+..                                     
T Consensus         2 ~w~~g~i~r~~Ae~lL~~~-~~G~FLvR~s~~~~~~~~Lsv~~-------------------------------------   43 (84)
T smart00252        2 PWYHGFISREEAEKLLKNE-GDGDFLVRDSESEPGDYVLSVRV-------------------------------------   43 (84)
T ss_pred             CeecccCCHHHHHHHHhcC-CCcEEEEEcCCCCCCCEEEEEEE-------------------------------------
Confidence            5999999999999999874 489999999976 7778888765                                     


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccC
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNS  397 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~  397 (513)
                                              .+.+.|+.|....++.|++.....|+++.+||++|...+
T Consensus        44 ------------------------~~~~~h~~I~~~~~~~~~l~~~~~F~sl~eLI~~y~~~~   82 (84)
T smart00252       44 ------------------------KGKVKHYRIRRNEDGKFYLDGGRKFPSLVELVEHYQKNS   82 (84)
T ss_pred             ------------------------CCEEEEEEEEECCCCcEEECCCCccCCHHHHHHHHhhCC
Confidence                                    245667777666556777777788999999999998753

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.89  E-value=4.1e-09  Score=106.88  Aligned_cols=79  Identities=23%  Similarity=0.243  Sum_probs=67.3

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      ++|++.+.||+|+||.||++....+...+++|....       ..+.|.+|+.+++.++|+||+++++++.+++.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            368899999999999999999887766776664321       1245888999999999999999999999999999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      |||+||
T Consensus        81 e~~~g~   86 (331)
T cd05597          81 DYYVGG   86 (331)
T ss_pred             ecCCCC
Confidence            999875

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []

Probab=98.89  E-value=3.6e-09  Score=83.07  Aligned_cols=76  Identities=38%  Similarity=0.648  Sum_probs=61.9

Q ss_pred             cCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhccC
Q psy17476        257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKE  335 (513)
Q Consensus       257 w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~~  335 (513)
                      |+++.++|.+|+++|....++|+||||.+.+ .+.|+|+++.                                      
T Consensus         1 W~~g~isr~~Ae~~L~~~~~~G~FLvR~s~~~~~~~~Lsv~~--------------------------------------   42 (77)
T PF00017_consen    1 WFHGFISRQEAERLLMQGKPDGTFLVRPSSSKPGKYVLSVRF--------------------------------------   42 (77)
T ss_dssp             TBEESSHHHHHHHHHHTTSSTTEEEEEEESSSTTSEEEEEEE--------------------------------------
T ss_pred             CcCCCCCHHHHHHHHHhcCCCCeEEEEecccccccccccccc--------------------------------------
Confidence            8999999999999998767899999999975 7788888776                                      


Q ss_pred             CcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcc
Q psy17476        336 GCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH  393 (513)
Q Consensus       336 g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~  393 (513)
                                             .+.+.|+.|....++.+++.....|+++.+||++|
T Consensus        43 -----------------------~~~v~h~~I~~~~~~~~~~~~~~~F~sl~~LV~~y   77 (77)
T PF00017_consen   43 -----------------------DGKVKHFRINRTENGGYFLSDGKKFPSLSDLVEHY   77 (77)
T ss_dssp             -----------------------TTEEEEEEEEEETTSEEESSTSSEBSSHHHHHHHH
T ss_pred             -----------------------ccccEEEEEEecCCceEEccCCCcCCCHHHHHHhC
Confidence                                   24566777777666666767777789999988875

Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.89  E-value=4.4e-09  Score=102.41  Aligned_cols=83  Identities=41%  Similarity=0.634  Sum_probs=68.7

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeecC--CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG--TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~--~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      |++..++|.+.+.||+|+||.||++.......++++...  ....+.|.+|+.+|++++|+||+++++++.. ...++||
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~   79 (260)
T cd05073           1 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT   79 (260)
T ss_pred             CcccccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence            788999999999999999999999987655444443222  2234578999999999999999999999887 7789999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      ||+++|
T Consensus        80 e~~~~~   85 (260)
T cd05073          80 EFMAKG   85 (260)
T ss_pred             EeCCCC
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.88  E-value=6e-09  Score=104.38  Aligned_cols=80  Identities=23%  Similarity=0.381  Sum_probs=68.0

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC-----CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-----SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-----~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      ++|.+.+.||+|+||.||+|+.+.+...+++|....     ....+.+|+.++++++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            578999999999999999999887666666663221     224678999999999999999999999999999999999


Q ss_pred             CCCCc
Q psy17476        504 SSFRL  508 (513)
Q Consensus       504 ~~~Gl  508 (513)
                      ++++|
T Consensus        86 ~~~~l   90 (309)
T cd07872          86 LDKDL   90 (309)
T ss_pred             CCCCH
Confidence            99877

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0201|consensus

Probab=98.88  E-value=5e-10  Score=111.65  Aligned_cols=81  Identities=21%  Similarity=0.287  Sum_probs=71.7

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC-----HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-----EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-----~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      ...|...+.||+|+||.||+|....+.+++++|.....     .++..+|+.++.+++++||.++||.+..+..++|+||
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe   91 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME   91 (467)
T ss_pred             ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence            34566678999999999999999999999988865433     3578899999999999999999999999999999999


Q ss_pred             cCCCCc
Q psy17476        503 TSSFRL  508 (513)
Q Consensus       503 ~~~~Gl  508 (513)
                      ||.||.
T Consensus        92 y~~gGs   97 (467)
T KOG0201|consen   92 YCGGGS   97 (467)
T ss_pred             HhcCcc
Confidence            999987

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.88  E-value=4.9e-09  Score=103.77  Aligned_cols=78  Identities=17%  Similarity=0.156  Sum_probs=64.6

Q ss_pred             ceeEeEecccccceEEEEEEeCceeeEEeecCCCC-------HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        431 LMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       431 ~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      |+..+.||+|+||.||++....+...+++|.....       ...+.+|+.++++++||||+++++++..++.+++||||
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            67788999999999999998766666665533211       23478899999999999999999999999999999999


Q ss_pred             CCCCc
Q psy17476        504 SSFRL  508 (513)
Q Consensus       504 ~~~Gl  508 (513)
                      |++|.
T Consensus        82 ~~~~~   86 (285)
T cd05605          82 MNGGD   86 (285)
T ss_pred             cCCCc
Confidence            99863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.88  E-value=6.3e-09  Score=102.59  Aligned_cols=79  Identities=16%  Similarity=0.219  Sum_probs=67.1

Q ss_pred             CceeEeEecccccceEEEEEEeCceeeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccC
Q psy17476        430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS  504 (513)
Q Consensus       430 ~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~  504 (513)
                      +|++.+.||+|+||.||+|....+...+++|....  .   .++|.+|++++++++||||+++++++...+..++||||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            57788899999999999999877666666664221  1   246889999999999999999999999999999999999


Q ss_pred             CCCc
Q psy17476        505 SFRL  508 (513)
Q Consensus       505 ~~Gl  508 (513)
                      ++|.
T Consensus        82 ~~~~   85 (279)
T cd06619          82 DGGS   85 (279)
T ss_pred             CCCC
Confidence            9975

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.87  E-value=3.2e-09  Score=111.95  Aligned_cols=83  Identities=18%  Similarity=0.164  Sum_probs=66.4

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCCHHHHHHHHHHHhcCCCCceeceeeEEEeC--------CeeE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKH--------RPIY  498 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~--------~~~~  498 (513)
                      ....|++.+.||+|+||.||+|....+...+++|..........+|+.+|++++|||||++++++...        ..++
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~  143 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLN  143 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEE
Confidence            45679999999999999999999887666666664444444556899999999999999999987432        2578


Q ss_pred             EEEccCCCCcc
Q psy17476        499 IVTDTSSFRLG  509 (513)
Q Consensus       499 lV~E~~~~Gl~  509 (513)
                      +|||||+++|.
T Consensus       144 lvmE~~~~~l~  154 (440)
T PTZ00036        144 VVMEFIPQTVH  154 (440)
T ss_pred             EEEecCCccHH
Confidence            99999999873

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=98.87  E-value=6.3e-09  Score=103.03  Aligned_cols=78  Identities=17%  Similarity=0.165  Sum_probs=65.3

Q ss_pred             ceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        431 LMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       431 ~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      |+..+.||+|+||.||++....++..+++|....       ....+.+|+.+|++++|+||+++++++.+.+..++||||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            6778899999999999999887666666663221       123578999999999999999999999999999999999


Q ss_pred             CCCCc
Q psy17476        504 SSFRL  508 (513)
Q Consensus       504 ~~~Gl  508 (513)
                      |++|-
T Consensus        82 ~~~g~   86 (285)
T cd05631          82 MNGGD   86 (285)
T ss_pred             cCCCc
Confidence            99873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=98.87  E-value=4.8e-09  Score=102.11  Aligned_cols=83  Identities=51%  Similarity=0.863  Sum_probs=68.9

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      |++..++|++.+.||+|+||.||++.......+++++.  .....+.|.+|+.+|++++|+||+++++++. ....++||
T Consensus         1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~   79 (260)
T cd05070           1 WEIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVT   79 (260)
T ss_pred             CCCchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEE
Confidence            77888999999999999999999998776555554433  2334567999999999999999999999885 45689999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      ||+++|
T Consensus        80 e~~~~~   85 (260)
T cd05070          80 EYMSKG   85 (260)
T ss_pred             EecCCC
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.87  E-value=1.3e-09  Score=107.87  Aligned_cols=57  Identities=21%  Similarity=0.201  Sum_probs=46.5

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      .+++|.+++........++...+..++.|++.++.|+|+.+++|||+||+|++++.+
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~  137 (384)
T COG0515          81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRD  137 (384)
T ss_pred             CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCC
Confidence            578888777765421135788999999999999999999999999999999665554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	513
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		2e-31
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		2e-31
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		2e-30
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-28
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-28
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		2e-28
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		4e-28
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		4e-28
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		5e-28
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		8e-28
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-27
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-26
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-23
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-23
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-23
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		3e-22
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		7e-22
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		7e-22
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		4e-20
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-19
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		7e-19
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		5e-18
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		6e-18
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		6e-18
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		3e-16
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		4e-16
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-16
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		4e-16
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		4e-16
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		4e-16
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		8e-16
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-15
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		2e-15
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-15
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-15
2ekx_A	110	Solution Structure Of The Human Bmx Sh2 Domain Leng		2e-15
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		2e-15
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		3e-15
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-15
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		3e-15
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		3e-15
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		3e-15
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		3e-15
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		3e-15
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-15
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-15
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		3e-15
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		3e-15
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		3e-15
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		3e-15
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		3e-15
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		3e-15
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		4e-15
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		1e-14
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		1e-14
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-14
2pl0_A	289	Lck Bound To Imatinib Length = 289		1e-14
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-14
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		1e-14
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		1e-14
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-14
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		1e-14
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		1e-14
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		1e-14
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		1e-14
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-14
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-14
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-14
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-14
2ge9_A	125	Solution Structures Of The Sh2 Domain Of Bruton's T		2e-14
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-14
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		2e-14
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-14
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-14
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-14
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		5e-14
3s9k_A	118	Crystal Structure Of The Itk Sh2 Domain Length = 11		6e-14
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-13
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		1e-13
1lui_A	110	Nmr Structures Of Itk Sh2 Domain, Pro287cis Isoform		2e-13
2etz_A	109	The Nmr Minimized Average Structure Of The Itk Sh2		2e-13
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-13
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-13
2k79_B	110	Solution Structure Of The Binary Complex Between Th		2e-13
1gl5_A	67	Nmr Structure Of The Sh3 Domain From The Tec Protei		2e-13
2dm0_A	125	Solution Structure Of The Sh2 Domain Of Human Tyros		3e-13
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		1e-11
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		1e-11
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		3e-11
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		4e-11
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		8e-05
1qly_A	58	Nmr Study Of The Sh3 Domain From Bruton's Tyrosine		4e-11
1aww_A	67	Sh3 Domain From Bruton's Tyrosine Kinase, Nmr, 42 S		6e-11
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		8e-11
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-05
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		8e-11
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		1e-05
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		9e-11
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		2e-05
2yuq_A	85	Solution Structure Of The Sh3 Domain Of Human Tyros		2e-10
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		5e-10
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		5e-10
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		5e-10
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		5e-10
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		5e-10
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		6e-10
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		6e-10
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-09
4fl2_A	636	Structural And Biophysical Characterization Of The		2e-09
4fl2_A	636	Structural And Biophysical Characterization Of The		1e-04
4fl3_A	635	Structural And Biophysical Characterization Of The		2e-09
4fl3_A	635	Structural And Biophysical Characterization Of The		2e-04
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		2e-09
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		2e-09
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		2e-09
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		2e-09
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-09
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-09
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		2e-09
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		2e-09
2lmj_A	66	Itk-Sh3 Length = 66		3e-09
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		3e-09
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-09
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		3e-09
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		5e-09
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		7e-07
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		8e-09
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		1e-04
1awj_A	77	Intramolecular Itk-Proline Complex, Nmr, Minimized		2e-08
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		3e-08
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		3e-06
2k79_A	63	Solution Structure Of The Binary Complex Between Th		3e-08
2rn8_A	64	Nmr Structure Note: Murine Itk Sh3 Domain Length =		3e-08
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		5e-08
1fvr_A	327	Tie2 Kinase Domain Length = 327		5e-08
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		5e-08
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		5e-08
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		2e-04
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		9e-08
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		9e-08
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-07
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		1e-07
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-07
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		1e-07
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		5e-05
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		1e-07
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		6e-04
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		1e-07
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		5e-05
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-07
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		1e-07
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		1e-07
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-07
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		1e-07
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		1e-07
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		5e-05
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-07
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-07
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		1e-07
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		6e-04
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		1e-07
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		1e-04
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		1e-07
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-07
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		1e-07
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		1e-07
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		1e-07
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		1e-07
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		1e-07
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		1e-07
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-07
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-07
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-07
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		1e-07
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		1e-07
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		1e-07
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		1e-04
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		2e-07
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-07
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		1e-04
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-07
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		3e-04
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-07
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		3e-04
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		2e-07
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		7e-06
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		2e-07
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		7e-06
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		2e-07
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		7e-06
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-07
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-06
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		2e-07
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		8e-06
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		2e-07
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		8e-06
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-07
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-06
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		2e-07
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-07
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-06
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		2e-07
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		2e-07
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		8e-06
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		2e-07
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-07
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-06
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-07
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		8e-06
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		2e-07
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		8e-06
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-07
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		8e-06
3h0h_A	73	Human Fyn Sh3 Domain R96i Mutant, Crystal Form I Le		2e-07
1efn_A	59	Hiv-1 Nef Protein In Complex With R96i Mutant Fyn S		3e-07
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		5e-07
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		5e-07
2hda_A	64	Yes Sh3 Domain Length = 64		6e-07
2yt6_A	109	Solution Structure Of The Sh3_1 Domain Of Yamaguchi		7e-07
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		7e-07
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		4e-04
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		8e-07
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		8e-07
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		4e-04
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		9e-07
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		9e-07
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		2e-04
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		1e-06
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		2e-04
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-06
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		2e-05
1wlp_B	138	Solution Structure Of The P22phox-P47phox Complex L		1e-06
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		1e-06
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-05
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		1e-06
3h0f_A	73	Crystal Structure Of The Human Fyn Sh3 R96w Mutant		2e-06
4ag2_C	84	Human Chymase - Fynomer Complex Length = 84		2e-06
3ua6_A	64	Crystal Structure Of The Human Fyn Sh3 Domain Lengt		2e-06
1fyn_A	62	Phosphotransferase Length = 62		2e-06
1m27_C	61	Crystal Structure Of SapFYNSH3SLAM TERNARY COMPLEX		2e-06
1a0n_B	69	Nmr Study Of The Sh3 Domain From Fyn Proto-Oncogene		2e-06
1azg_B	67	Nmr Study Of The Sh3 Domain From Fyn Proto-Oncogene		3e-06
3nhn_A	193	Crystal Structure Of The Src-Family Kinase Hck Sh3-		3e-06
1shf_A	59	Crystal Structure Of The Sh3 Domain In Human Fyn; C		3e-06
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		3e-06
4d8d_A	58	Crystal Structure Of Hiv-1 Nef Fyn-sh3 R96w Variant		3e-06
1avz_C	57	V-1 Nef Protein In Complex With Wild Type Fyn Sh3 D		3e-06
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		3e-06
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		3e-06
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		2e-04
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		3e-06
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		3e-04
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		3e-06
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		2e-04
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		3e-06
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		3e-06
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		3e-04
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		3e-06
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		3e-04
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		3e-06
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		3e-04
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		3e-06
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		3e-04
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		3e-06
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		3e-04
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		3e-06
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		3e-04
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		3e-06
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		3e-04
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		3e-06
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		3e-04
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		3e-06
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		3e-04
3uf4_A	164	Crystal Structure Of A Sh3 And Sh2 Domains Of Fyn P		3e-06
3uf4_A	164	Crystal Structure Of A Sh3 And Sh2 Domains Of Fyn P		4e-05
1u5s_A	71	Nmr Structure Of The Complex Between Nck-2 Sh3 Doma		4e-06
1g83_A	165	Crystal Structure Of Fyn Sh3-Sh2 Length = 165		4e-06
1g83_A	165	Crystal Structure Of Fyn Sh3-Sh2 Length = 165		2e-05
1g83_A	165	Crystal Structure Of Fyn Sh3-Sh2 Length = 165		5e-05
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-06
2fry_A	61	Solution Structure Of The Third Sh3 Domain Of Human		4e-06
1wx6_A	91	Solution Structure Of The Sh3 Domain Of The Human C		4e-06
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		5e-06
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		6e-06
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		6e-06
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		7e-06
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		7e-06
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		7e-06
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		7e-06
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		7e-06
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		7e-06
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		8e-06
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		8e-06
1uec_A	193	Crystal Structure Of Autoinhibited Form Of Tandem S		9e-06
1ng2_A	193	Structure Of Autoinhibited P47phox Length = 193		9e-06
1aot_F	106	Nmr Structure Of The Fyn Sh2 Domain Complexed With		1e-05
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		1e-05
3qwy_A	308	Ced-2 Length = 308		1e-05
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		1e-05
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		1e-05
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
3qwx_X	174	Ced-2 1-174 Length = 174		1e-05
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
1a1a_A	107	C-Src (Sh2 Domain With C188a Mutation) Complexed Wi		1e-05
1a1a_A	107	C-Src (Sh2 Domain With C188a Mutation) Complexed Wi		4e-05
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-05
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-05
2dly_A	121	Solution Structure Of The Sh2 Domain Of Murine Fyn-		2e-05
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		2e-05
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		2e-05
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		2e-05
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-05
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		2e-05
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		2e-05
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		2e-05
4afz_C	84	Human Chymase - Fynomer Complex Length = 84		2e-05
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		2e-05
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		2e-05
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-05
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-05
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-05
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-05
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		2e-05
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-05
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-05
1x2q_A	88	Solution Structure Of The Sh3 Domain Of The Signal		2e-05
1prl_C	64	Two Binding Orientations For Peptides To Src Sh3 Do		3e-05
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-05
1bkl_A	113	Self-Associated Apo Src Sh2 Domain Length = 113		3e-05
1bkl_A	113	Self-Associated Apo Src Sh2 Domain Length = 113		5e-04
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		3e-05
4hck_A	72	Human Hck Sh3 Domain, Nmr, 25 Structures Length = 7		3e-05
1bu1_A	57	Src Family Kinase Hck Sh3 Domain Length = 57		3e-05
1ov3_A	138	Structure Of The P22phox-P47phox Complex Length = 1		3e-05
1o4c_A	108	Crystal Structure Of Sh2 In Complex With Phosphate.		3e-05
1o4c_A	108	Crystal Structure Of Sh2 In Complex With Phosphate.		6e-05
1shd_A	107	Peptide Inhibitors Of Src Sh3-Sh2-Phosphoprotein In		3e-05
1shd_A	107	Peptide Inhibitors Of Src Sh3-Sh2-Phosphoprotein In		8e-05
4hxj_A	60	Crystal Structure Of Sh3:rgt Complex Length = 60		3e-05
2oi3_A	86	Nmr Structure Analysis Of The Hematopoetic Cell Kin		4e-05
1o41_A	108	Crystal Structure Of Sh2 In Complex With Ru78300. L		4e-05
1o41_A	108	Crystal Structure Of Sh2 In Complex With Ru78300. L		7e-05
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		4e-05
3hck_A	107	Nmr Ensemble Of The Uncomplexed Human Hck Sh2 Domai		4e-05
1wa7_A	65	Sh3 Domain Of Human Lyn Tyrosine Kinase Length = 65		4e-05
4afq_C	85	Human Chymase - Fynomer Complex Length = 85		4e-05
1qwe_A	64	C-Src Sh3 Domain Complexed With Ligand App12 Length		4e-05
4f59_A	112	Triple Mutant Src Sh2 Domain Length = 112		4e-05
4f59_A	112	Triple Mutant Src Sh2 Domain Length = 112		1e-04
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		5e-05
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-04
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		5e-05
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		3e-04
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-05
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		5e-05
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		3e-04
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		5e-05
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-05
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		5e-05
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		3e-04
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		5e-05
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		3e-04
1bkm_A	113	Cocrystal Structure Of D-Amino Acid Substituted Pho		5e-05
1bkm_A	113	Cocrystal Structure Of D-Amino Acid Substituted Pho		5e-04
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		5e-05
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		3e-04
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		5e-05
3fj5_A	57	Crystal Structure Of The C-Src-Sh3 Domain Length =		5e-05
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		5e-05
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		4e-04
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		5e-05
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		5e-05
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-05
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-04
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		5e-05
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		3e-04
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		5e-05
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		3e-04
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-05
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-04
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		5e-05
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		4e-04
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		5e-05
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		3e-04
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		5e-05
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		3e-04
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		5e-05
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		3e-04
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		5e-05
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		3e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		5e-05
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-04
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		5e-05
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		3e-04
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		5e-05
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		5e-05
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		3e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		5e-05
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		5e-05
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		5e-05
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		4e-04
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		5e-05
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		4e-04
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		6e-05
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		4e-04
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		6e-05
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		4e-04
2l2p_A	66	Folding Intermediate Of The Fyn Sh3 A39vN53PV55L FR		6e-05
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		6e-05
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		4e-04
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		6e-05
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		6e-05
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		4e-04
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		6e-05
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		3e-04
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		6e-05
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		3e-04
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		6e-05
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		6e-05
1lck_A	175	Sh3-Sh2 Domain Fragment Of Human P56-Lck Tyrosine K		6e-05
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		6e-05
4d8k_A	175	Crystal Structure Of A Sh3-Sh2 Domains Of A Lymphoc		6e-05
1uj0_A	62	Crystal Structure Of Stam2 Sh3 Domain In Complex Wi		7e-05
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		7e-05
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		7e-05
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		7e-05
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		7e-05
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		8e-05
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		8e-05
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		8e-05
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		8e-05
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		9e-05
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		9e-05
2d8j_A	77	Solution Structure Of The Sh3 Domain Of Fyn-Related		9e-05
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		9e-05
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		9e-05
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		9e-05
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		9e-05
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		9e-05
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		9e-05
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		9e-05
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		9e-05
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		9e-05
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		9e-05
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		9e-05
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		9e-05
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		9e-05
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		1e-04
1skj_A	113	Cocrystal Structure Of Urea-Substituted Phosphopept		1e-04
1skj_A	113	Cocrystal Structure Of Urea-Substituted Phosphopept		5e-04
1sha_A	104	Crystal Structure Of The Phosphotyrosine Recognitio		1e-04
1sha_A	104	Crystal Structure Of The Phosphotyrosine Recognitio		6e-04
1p13_A	102	Crystal Structure Of The Src Sh2 Domain Complexed W		1e-04
1p13_A	102	Crystal Structure Of The Src Sh2 Domain Complexed W		6e-04
1wxb_A	68	Solution Structure Of The Sh3 Domain From Human Epi		1e-04
1is0_A	106	Crystal Structure Of A Complex Of The Src Sh2 Domai		1e-04
1is0_A	106	Crystal Structure Of A Complex Of The Src Sh2 Domai		6e-04
1nzl_A	103	Crystal Structure Of Src Sh2 Domain Bound To Doubly		1e-04
1nzl_A	103	Crystal Structure Of Src Sh2 Domain Bound To Doubly		7e-04
1kc2_A	103	Structure Of The Triple (Lys(Beta)d3ala, Asp(Beta)c		1e-04
1kc2_A	103	Structure Of The Triple (Lys(Beta)d3ala, Asp(Beta)c		8e-04
2l0a_A	72	Solution Nmr Structure Of Signal Transducing Adapte		1e-04
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		1e-04
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		1e-04
2k2m_A	68	Structural Basis Of Pxxdy Motif Recognition In Sh3		1e-04
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		1e-04
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		1e-04
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-04
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-04
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-04
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-04
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		2e-04
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		2e-04
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		2e-04
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		2e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		4e-04
2jxb_A	86	Structure Of Cd3epsilon-Nck2 First Sh3 Domain Compl		2e-04
2lqn_A	303	Solution Structure Of Crkl Length = 303		2e-04
2lqw_A	303	Solution Structure Of Phosphorylated Crkl Length =		2e-04
2jw4_A	72	Nmr Solution Structure Of The N-Terminal Sh3 Domain		2e-04
2b86_A	67	Solution Structure Of The First Src Homology 3 Doma		2e-04
3cqt_A	79	N53i V55l Mutant Of Fyn Sh3 Domain Length = 79		2e-04
1f1w_A	104	Src Sh2 Thref1trp Mutant Complexed With The Phospho		3e-04
1gri_A	217	Grb2 Length = 217		3e-04
2js2_A	63	Solution Structure Of First Sh3 Domain Of Adaptor N		3e-04
1x27_A	167	Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding S		4e-04
3reb_B	90	Hiv-1 Nef Protein In Complex With Engineered Hck-Sh		4e-04
1bmb_A	123	Grb2-Sh2 Domain In Complex With KpfyVnvef (Pkf270-9		5e-04
3n84_A	112	Crystal Structure Of The Grb2 Sh2 Domain In Complex		5e-04
1fhs_A	112	The Three-Dimensional Solution Structure Of The Src		5e-04
3rbb_B	61	Hiv-1 Nef Protein In Complex With Engineered Hck Sh		5e-04
2vwf_A	58	Grb2 Sh3c (2) Length = 58		5e-04
3ove_A	117	Crystal Structure Of The Grb2 Sh2 Domain In Complex		5e-04
3imd_A	117	Crystal Structure Of The Grb2 Sh2 Domain In Complex		5e-04
1uhf_A	69	Solution Structure Of The Third Sh3 Domain Of Human		5e-04
3gf9_A	295	Crystal Structure Of Human Intersectin 2 Rhogef Dom		5e-04
2aoa_A	99	Crystal Structures Of A High-affinity Macrocyclic P		6e-04
2d8h_A	80	Solution Structure Of The Sh3 Domain Of Hypothetica		6e-04
1zfp_E	98	Growth Factor Receptor Binding Protein Sh2 Domain C		6e-04
1tze_E	98	Signal Transduction Adaptor Growth Factor, Grb2 Sh2		6e-04
3mxc_A	101	Structures Of Grb2-Sh2 Domain And Aicd Peptide Comp		6e-04
2h46_E	116	Native Domain-Swapped Dimer Crystal Structure Of Th		6e-04
2dl4_A	68	Solution Structure Of The First Sh3 Domain Of Stac		6e-04
1bm2_A	117	Grb2-Sh2 Domain In Complex With Cyclo-[n-Alpha-Acet		6e-04
1fyr_A	114	Dimer Formation Through Domain Swapping In The Crys		6e-04
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		6e-04
1h92_A	63	Sh3 Domain Of Human Lck Tyrosine Kinase Length = 63		6e-04
2a08_A	60	Structure Of The Yeast Yhh6 Sh3 Domain Length = 60		7e-04
2iim_A	62	Sh3 Domain Of Human Lck Length = 62		7e-04
1udl_A	98	The Solution Structure Of The Fifth Sh3 Domain Of I		7e-04
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		7e-04
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		7e-04
2l3s_A	163	Structure Of The Autoinhibited Crk Length = 163		8e-04
1oot_A	60	Crystal Structure Of The Sh3 Domain From A S. Cerev		8e-04
2rol_A	64	Structural Basis Of Pxxdy Motif Recognition In Sh3		9e-04
1kik_A	57	Sh3 Domain Of Lymphocyte Specific Kinase (Lck) Leng		9e-04

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score =  134 bits (336), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 61/94 (64%), Positives = 76/94 (80%), Gaps = 2/94 (2%)
Query: 411 RPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDD 468
           +  P+TAGL +  WEIDP +L  L+ELG+GQFGVV+ GKWRG  DVA  M+KEG+MSED+
Sbjct: 6   KNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE 65
Query: 469 FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           FIEEAKVM  L H+ LVQLYGVC+K RPI+I+T+
Sbjct: 66  FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score =  134 bits (336), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 61/94 (64%), Positives = 76/94 (80%), Gaps = 2/94 (2%)
Query: 411 RPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDD 468
           +  P+TAGL +  WEIDP +L  L+ELG+GQFGVV+ GKWRG  DVA  M+KEG+MSED+
Sbjct: 6   KNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE 65
Query: 469 FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           FIEEAKVM  L H+ LVQLYGVC+K RPI+I+T+
Sbjct: 66  FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 60/90 (66%), Positives = 73/90 (81%), Gaps = 2/90 (2%)
Query: 415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEE 472
            TAGL +  WEIDP +L  L+ELG+GQFGVV+ GKWRG  DVA  M+KEG+MSED+FIEE
Sbjct: 1   GTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEE 60
Query: 473 AKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           AKVM  L H+ LVQLYGVC+K RPI+I+T+
Sbjct: 61  AKVMMNLSHEKLVQLYGVCTKQRPIFIITE 90

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 7/180 (3%)
Query: 331 VKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 387
            ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +   +S+ 
Sbjct: 84  AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 143
Query: 388 EVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRR 447
           ++V Y+  ++ GL  RL T+ C    P T GL+ D WEI    L L  +LG G FG V  
Sbjct: 144 QLVAYYSKHADGLCHRL-TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWM 202
Query: 448 GKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
           G W G+  VA+  +K GTMS + F++EA+VM +L+H+ LVQLY V S+  PIYIVT+  S
Sbjct: 203 GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMS 261

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 7/180 (3%)
Query: 331 VKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 387
            ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +   +S+ 
Sbjct: 84  AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 143
Query: 388 EVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRR 447
           ++V Y+  ++ GL  RL T+ C    P T GL+ D WEI    L L  +LG G FG V  
Sbjct: 144 QLVAYYSKHADGLCHRL-TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWM 202
Query: 448 GKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
           G W G+  VA+  +K GTMS + F++EA+VM +L+H+ LVQLY V S+  PIYIVT+  S
Sbjct: 203 GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMS 261

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 108/177 (61%), Gaps = 7/177 (3%)
Query: 331 VKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 387
            ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +   +S+ 
Sbjct: 167 AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 226
Query: 388 EVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRR 447
           ++V Y+  ++ GL  RL T+ C    P T GL+ D WEI    L L  +LG G FG V  
Sbjct: 227 QLVAYYSKHADGLCHRL-TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWM 285
Query: 448 GKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           G W G+  VA+  +K GTMS + F++EA+VM +L+H+ LVQLY V S+  PIYIVT+
Sbjct: 286 GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTE 341

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score =  122 bits (306), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQH 481
           WEIDP +L  L+ELG+GQFGVV+ GKWRG  DVA  M+KEG+MSED+FIEEAKVM  L H
Sbjct: 4   WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH 63
Query: 482 QNLVQLYGVCSKHRPIYIVTD 502
           + LVQLYGVC+K RPI+I+T+
Sbjct: 64  EKLVQLYGVCTKQRPIFIITE 84

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score =  122 bits (306), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQH 481
           WEIDP +L  L+ELG+GQFGVV+ GKWRG  DVA  M+KEG+MSED+FIEEAKVM  L H
Sbjct: 3   WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH 62
Query: 482 QNLVQLYGVCSKHRPIYIVTD 502
           + LVQLYGVC+K RPI+I+T+
Sbjct: 63  EKLVQLYGVCTKQRPIFIITE 83

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score =  122 bits (306), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQH 481
           WEIDP +L  L+ELG+GQFGVV+ GKWRG  DVA  M+KEG+MSED+FIEEAKVM  L H
Sbjct: 4   WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH 63
Query: 482 QNLVQLYGVCSKHRPIYIVTD 502
           + LVQLYGVC+K RPI+I+T+
Sbjct: 64  EKLVQLYGVCTKQRPIFIITE 84

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score =  121 bits (304), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 108/180 (60%), Gaps = 7/180 (3%)
Query: 331 VKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 387
            ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +   +S+ 
Sbjct: 84  AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 143
Query: 388 EVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRR 447
           ++V Y+  ++ GL  RL T+ C    P T GL+ D WEI    L L  +LG G FG V  
Sbjct: 144 QLVAYYSKHADGLCHRL-TTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWM 202
Query: 448 GKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
           G W G+  VA+  +K GTMS + F++EA+VM +L+H+ LVQLY V S+  PIYIV +  S
Sbjct: 203 GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVGEYMS 261

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 107/179 (59%), Gaps = 7/179 (3%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +    S+ +
Sbjct: 86  ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 145
Query: 389 VVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG 448
           +V Y+  ++ GL  RL T+ C    P T GL+ D WEI    L L  +LG G FG V  G
Sbjct: 146 LVAYYSKHADGLCHRL-TNVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG 204
Query: 449 KWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
            W G+  VA+  +K G MS + F++EA+VM +L+H+ LVQLY V S+  PIYIVT+  S
Sbjct: 205 TWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMS 262

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQN 483
           IDP +L  L+ELG+GQFGVV+ GKWRG  DVA  M+KEG+MSED+FIEEAKVM  L H+ 
Sbjct: 1   IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 60
Query: 484 LVQLYGVCSKHRPIYIVTD 502
           LVQLYGVC+K RPI+I+T+
Sbjct: 61  LVQLYGVCTKQRPIFIITE 79

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 103/177 (58%), Gaps = 9/177 (5%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHR 394
           G F+VR S S+ G  ++SL  +     V HY I   S G+ ++S +   +++ E+V++H 
Sbjct: 127 GSFLVRESESSPGQRSISLRYE---GRVYHYRINTASDGKLYVSSESRFNTLAELVHHHS 183
Query: 395 HNSGGLASRLKTSPCDRPVPATAGLS--HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG 452
             + GL + L      R  P   G+S  +DKWE++  ++ +  +LG GQ+G V  G W+ 
Sbjct: 184 TVADGLITTLHYPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK 243
Query: 453 ---SIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
              ++ V  +KE TM  ++F++EA VM  ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 244 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 300

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 103/177 (58%), Gaps = 9/177 (5%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHR 394
           G F+VR S S+ G  ++SL  +     V HY I   S G+ ++S +   +++ E+V++H 
Sbjct: 166 GSFLVRESESSPGQRSISLRYE---GRVYHYRINTASDGKLYVSSESRFNTLAELVHHHS 222
Query: 395 HNSGGLASRLKTSPCDRPVPATAGLS--HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG 452
             + GL + L      R  P   G+S  +DKWE++  ++ +  +LG GQ+G V  G W+ 
Sbjct: 223 TVADGLITTLHYPAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK 282
Query: 453 ---SIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
              ++ V  +KE TM  ++F++EA VM  ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 283 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 339

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQ 482
           E+   E+ LL+ELGSGQFGVV+ GKW+G  DVA  M+KEG+MSED+F +EA+ M +L H 
Sbjct: 4   ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHP 63
Query: 483 NLVQLYGVCSKHRPIYIVTDTSS 505
            LV+ YGVCSK  PIYIVT+  S
Sbjct: 64  KLVKFYGVCSKEYPIYIVTEYIS 86

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score =  102 bits (253), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 98/172 (56%), Gaps = 8/172 (4%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPHP--HVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
           G F++R+S +TKG Y+LS+    P     VKHY I+    G F++S +    ++ E+V++
Sbjct: 94  GSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDH 153
Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG 452
           ++  + GL  +L + PC    P       D WEI    L L ++LG+GQFG V    +  
Sbjct: 154 YKKGNDGLCQKL-SVPCMSSKPQKP-WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNK 211
Query: 453 SIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
              VA+  MK G+MS + F+ EA VM  LQH  LV+L+ V +K  PIYI+T+
Sbjct: 212 HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-PIYIITE 262

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score =  102 bits (253), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 98/172 (56%), Gaps = 8/172 (4%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPHP--HVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
           G F++R+S +TKG Y+LS+    P     VKHY I+    G F++S +    ++ E+V++
Sbjct: 88  GSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDH 147
Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG 452
           ++  + GL  +L + PC    P       D WEI    L L ++LG+GQFG V    +  
Sbjct: 148 YKKGNDGLCQKL-SVPCMSSKPQKP-WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNK 205
Query: 453 SIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
              VA+  MK G+MS + F+ EA VM  LQH  LV+L+ V +K  PIYI+T+
Sbjct: 206 HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-PIYIITE 256

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQ 480
           KW IDP+EL  ++E+GSGQFG+V  G W     VA+  ++EG MSE+DFIEEA+VM +L 
Sbjct: 2   KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS 61
Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
           H  LVQLYGVC +  PI +VT+
Sbjct: 62  HPKLVQLYGVCLEQAPICLVTE 83

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/80 (56%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQ 480
           KW IDP+EL  ++E+GSGQFG+V  G W     VA+  ++EG MSE+DFIEEA+VM +L 
Sbjct: 4   KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS 63
Query: 481 HQNLVQLYGVCSKHRPIYIV 500
           H  LVQLYGVC +  PI +V
Sbjct: 64  HPKLVQLYGVCLEQAPICLV 83

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 92.0 bits (227), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQN 483
           IDP+EL  ++E+GSGQFG+V  G W     VA+  +KEG+MSEDDFIEEA+VM +L H  
Sbjct: 24  IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPK 83
Query: 484 LVQLYGVCSKHRPIYIV 500
           LVQLYGVC +  PI +V
Sbjct: 84  LVQLYGVCLEQAPICLV 100

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQN 483
           IDP+EL  ++E+GSGQFG+V  G W     VA+  ++EG MSE+DFIEEA+VM +L H  
Sbjct: 4   IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 63
Query: 484 LVQLYGVCSKHRPIYIV 500
           LVQLYGVC +  PI +V
Sbjct: 64  LVQLYGVCLEQAPICLV 80

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 89.0 bits (219), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQN 483
           IDP+EL  ++E+GSGQFG+V  G W     VA+  ++EG MSE+DFIEEA+VM +L H  
Sbjct: 2   IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 61
Query: 484 LVQLYGVCSKHRPIYIV 500
           LVQLYGVC +  PI +V
Sbjct: 62  LVQLYGVCLEQAPICLV 78

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 89.0 bits (219), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQN 483
           IDP+EL  ++E+GSGQFG+V  G W     VA+  ++EG MSE+DFIEEA+VM +L H  
Sbjct: 4   IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 63
Query: 484 LVQLYGVCSKHRPIYIV 500
           LVQLYGVC +  PI +V
Sbjct: 64  LVQLYGVCLEQAPICLV 80

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRL 479
           D WEI    L L++ LG+GQFG V  G W G+  VA+  +K GTMS + F+EEA++M +L
Sbjct: 2   DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKL 61
Query: 480 QHQNLVQLYGVCSKHRPIYIVTD 502
           +H  LVQLY V S+  PIYIVT+
Sbjct: 62  KHDKLVQLYAVVSEE-PIYIVTE 83

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
           T GL+ D WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++EA
Sbjct: 5   TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
           +VM +L+H+ LVQLY V S+  PIYIVT+  S
Sbjct: 65  QVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMS 95

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
           T GL+ D WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++EA
Sbjct: 5   TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
           +VM +L+H+ LVQLY V S+  PIYIVT+  S
Sbjct: 65  QVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMS 95

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
           T GL+ D WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++EA
Sbjct: 5   TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
           +VM +L+H+ LVQLY V S+  PIYIVT+  S
Sbjct: 65  QVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMS 95

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
           T GL+ D WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++EA
Sbjct: 2   TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 61
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +VM +L+H+ LVQLY V S+  PIYIVT+
Sbjct: 62  QVMKKLRHEKLVQLYAVVSEE-PIYIVTE 89

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
           T GL+ D WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++EA
Sbjct: 2   TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 61
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +VM +L+H+ LVQLY V S+  PIYIVT+
Sbjct: 62  QVMKKLRHEKLVQLYAVVSEE-PIYIVTE 89

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
           T GL+ D WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++EA
Sbjct: 5   TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
           +VM +++H+ LVQLY V S+  PIYIVT+  S
Sbjct: 65  QVMKKIRHEKLVQLYAVVSEE-PIYIVTEYMS 95

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKV 475
           +S DKWE++  ++ +  +LG GQFG V  G W+    ++ V  +KE TM  ++F++EA V
Sbjct: 1   MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 60
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
           M  ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 61  MKEIKHPNLVQLLGVCTREPPFYIITEFMTY 91

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
           T GL+ D WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++EA
Sbjct: 5   TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
           +VM +L+H+ LVQLY V S+  PIYIV +  S
Sbjct: 65  QVMKKLRHEKLVQLYAVVSEE-PIYIVIEYMS 95

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
           T GL+ D WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++EA
Sbjct: 5   TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
           +VM +L+H+ LVQLY V S+  PIYIV +  S
Sbjct: 65  QVMKKLRHEKLVQLYAVVSEE-PIYIVCEYMS 95

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
           T GL+ D WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++EA
Sbjct: 5   TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
           +VM +L+H+ LVQLY V S+  PIYIV +  S
Sbjct: 65  QVMKKLRHEKLVQLYAVVSEE-PIYIVIEYMS 95

>pdb|2EKX|A Chain A, Solution Structure Of The Human Bmx Sh2 Domain Length = 110

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 56/77 (72%), Gaps = 3/77 (3%)
Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVPHPH---VKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           K KEG F+VRNSS  G+YT+SL++K  +     VKHYH+  N+  + +L+E +C  SIP+
Sbjct: 30  KGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPK 89
Query: 389 VVNYHRHNSGGLASRLK 405
           +++YH+HNS G+ +RL+
Sbjct: 90  LIHYHQHNSAGMITRLR 106

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEA 473
           T GL+ D WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++EA
Sbjct: 5   TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEA 64
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
           +VM +L+H+ LVQLY V S+  PIYIV +  S
Sbjct: 65  QVMKKLRHEKLVQLYAVVSEE-PIYIVMEYMS 95

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 64  KEIKHPNLVQLLGVCTREPPFYIITEFMTY 93

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKV 475
           +S DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA V
Sbjct: 1   MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 60
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
           M  ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 61  MKEIKHPNLVQLLGVCTREPPFYIITEFMTY 91

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 9   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 69  KEIKHPNLVQLLGVCTREPPFYIITEFMTY 98

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 17  NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 76
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 77  KEIKHPNLVQLLGVCTREPPFYIITEFMTY 106

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 64  KEIKHPNLVQLLGVCTREPPFYIITEFMTY 93

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 9   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 69  KEIKHPNLVQLLGVCTREPPFYIITEFMTY 98

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 8   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 67
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 68  KEIKHPNLVQLLGVCTREPPFYIITEFMTY 97

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 6   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 66  KEIKHPNLVQLLGVCTREPPFYIITEFMTY 95

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 6   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 66  KEIKHPNLVQLLGVCTREPPFYIITEFMTY 95

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 64  KEIKHPNLVQLLGVCTREPPFYIITEFMTY 93

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 9   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 69  KEIKHPNLVQLLGVCTREPPFYIITEFMTY 98

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 5   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 65  KEIKHPNLVQLLGVCTREPPFYIITEFMTY 94

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 64  KEIKHPNLVQLLGVCTREPPFYIITEFMTY 93

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 9   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 69  KEIKHPNLVQLLGVCTREPPFYIITEFMTY 98

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 6   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+T+  ++
Sbjct: 66  KEIKHPNLVQLLGVCTREPPFYIITEFMTY 95

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVM 476
           L+ D WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++EA+VM
Sbjct: 1   LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVM 60
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
            +L+H+ LVQLY V S+  PIYIVT+  S
Sbjct: 61  KKLRHEKLVQLYAVVSEE-PIYIVTEYMS 88

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
            D+WE+    L L+E LG+GQFG V  G + G   VA+  +K+G+MS D F+ EA +M +
Sbjct: 10  EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 69
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
           LQHQ LV+LY V ++  PIYI+T+
Sbjct: 70  LQHQRLVRLYAVVTQE-PIYIITE 92

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
            D+WE+    L L+E LG+GQFG V  G + G   VA+  +K+G+MS D F+ EA +M +
Sbjct: 11  EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 70
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
           LQHQ LV+LY V ++  PIYI+T+
Sbjct: 71  LQHQRLVRLYAVVTQE-PIYIITE 93

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
            D+WE+    L L+E LG+GQFG V  G + G   VA+  +K+G+MS D F+ EA +M +
Sbjct: 11  EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 70
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
           LQHQ LV+LY V ++  PIYI+T+
Sbjct: 71  LQHQRLVRLYAVVTQE-PIYIITE 93

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
            D+WE+    L L+E LG+GQFG V  G + G   VA+  +K+G+MS D F+ EA +M +
Sbjct: 15  EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 74
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
           LQHQ LV+LY V ++  PIYI+T+
Sbjct: 75  LQHQRLVRLYAVVTQE-PIYIITE 97

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
            D+WE+    L L+E LG+GQFG V  G + G   VA+  +K+G+MS D F+ EA +M +
Sbjct: 13  EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 72
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
           LQHQ LV+LY V ++  PIYI+T+
Sbjct: 73  LQHQRLVRLYAVVTQE-PIYIITE 95

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
            D+WE+    L L+E LG+GQFG V  G + G   VA+  +K+G+MS D F+ EA +M +
Sbjct: 5   EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 64
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
           LQHQ LV+LY V ++  PIYI+T+
Sbjct: 65  LQHQRLVRLYAVVTQE-PIYIITE 87

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
            D+WE+    L L+E LG+GQFG V  G + G   VA+  +K+G+MS D F+ EA +M +
Sbjct: 5   EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 64
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
           LQHQ LV+LY V ++  PIYI+T+
Sbjct: 65  LQHQRLVRLYAVVTQE-PIYIITE 87

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 9   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+ +  ++
Sbjct: 69  KEIKHPNLVQLLGVCTREPPFYIIIEFMTY 98

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRL 479
           D+WE+    L L+E LG+GQFG V  G + G   VA+  +K+G+MS D F+ EA +M +L
Sbjct: 1   DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 60
Query: 480 QHQNLVQLYGVCSKHRPIYIVTD 502
           QHQ LV+LY V ++  PIYI+T+
Sbjct: 61  QHQRLVRLYAVVTQE-PIYIITE 82

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
            D+WE+    L L+E LG+GQFG V  G + G   VA+  +K+G+MS D F+ EA +M +
Sbjct: 14  EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 73
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
           LQHQ LV+LY V ++  PIYI+T+
Sbjct: 74  LQHQRLVRLYAVVTQE-PIYIITE 96

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
            D+WE+    L L+E LG+GQFG V  G + G   VA+  +K+G+MS D F+ EA +M +
Sbjct: 7   EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 66
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
           LQHQ LV+LY V ++  PIYI+T+
Sbjct: 67  LQHQRLVRLYAVVTQE-PIYIITE 89

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
            D+WE+    L L+E LG+GQFG V  G + G   VA+  +K+G+MS D F+ EA +M +
Sbjct: 5   EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 64
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
           LQHQ LV+LY V ++  PIYI+T+
Sbjct: 65  LQHQRLVRLYAVVTQE-PIYIITE 87

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+ +  ++
Sbjct: 64  KEIKHPNLVQLLGVCTREPPFYIIIEFMTY 93

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 5   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+ +  ++
Sbjct: 65  KEIKHPNLVQLLGVCTREPPFYIIIEFMTY 94

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+ +  ++
Sbjct: 64  KEIKHPNLVQLLGVCTREPPFYIIIEFMTY 93

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
            D+WE+    L L+E LG+GQFG V  G + G   VA+  +K+G+MS D F+ EA +M +
Sbjct: 6   EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 65
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
           LQHQ LV+LY V ++  PIYI+T+
Sbjct: 66  LQHQRLVRLYAVVTQE-PIYIITE 88

>pdb|2GE9|A Chain A, Solution Structures Of The Sh2 Domain Of Bruton's Tyrosine Kinase Length = 125

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
           KEG F+VR+SS  G YT+S++ K    P   ++HY +    + +++L+EKH   +IPE++
Sbjct: 32  KEGGFIVRDSSKAGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPELI 91
Query: 391 NYHRHNSGGLASRLK--TSPCDRPVPAT 416
           NYH+HNS GL SRLK   S  ++  P+T
Sbjct: 92  NYHQHNSAGLISRLKYPVSQQNKNAPST 119

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           S DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 23  SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 82
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
             ++H NLVQL GVC+   P YIVT+
Sbjct: 83  KEIKHPNLVQLLGVCTLEPPFYIVTE 108

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRL 479
           D WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++EA+VM +L
Sbjct: 2   DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL 61
Query: 480 QHQNLVQLYGVCSKHRPIYIVTDTSS 505
           +H+ LVQLY V S+  PIYIVT+  S
Sbjct: 62  RHEKLVQLYAVVSEE-PIYIVTEYMS 86

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTMSEDDFIEEAKVM 476
           S DKWE++  ++ +  +LG GQ+G V  G W+    ++ V  +KE TM  ++F++EA VM
Sbjct: 2   SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
             ++H NLVQL GVC++  P YI+ +  ++
Sbjct: 62  KEIKHPNLVQLLGVCTREPPFYIIIEFMTY 91

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRL 479
           D WEI    + L++ LG+GQFG V  G +  S  VA+  +K GTMS   F+EEA +M  L
Sbjct: 6   DAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL 65
Query: 480 QHQNLVQLYGVCSKHRPIYIVTD 502
           QH  LV+LY V ++  PIYI+T+
Sbjct: 66  QHDKLVRLYAVVTREEPIYIITE 88

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 418 GLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKV 475
           G     WEI    + L+++LG+GQFG V  G +  S  VA+  +K GTMS   F+EEA +
Sbjct: 1   GAMDPAWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANL 60
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           M  LQH  LV+LY V +K  PIYI+T+
Sbjct: 61  MKTLQHDKLVRLYAVVTKEEPIYIITE 87

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 56/82 (68%), Gaps = 3/82 (3%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQ 480
           +WE+    L L+E LG+GQFG V  G + G   VA+  +K+G+MS D F+ EA +M +LQ
Sbjct: 3   EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ 62
Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
           HQ LV+LY V ++  PIYI+T+
Sbjct: 63  HQRLVRLYAVVTQE-PIYIITE 83

>pdb|3S9K|A Chain A, Crystal Structure Of The Itk Sh2 Domain Length = 118

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQ--NSRGEFFLSEKHCCHSIPE 388
           KEG F+VR+S T G YT+S++TK     +P +KHYHIK+  +S   ++++EK+   SIP 
Sbjct: 30  KEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPL 89
Query: 389 VVNYHRHNSGGLASRLKTSPCDRP 412
           ++ YH++N GGL +RL+   C  P
Sbjct: 90  LIQYHQYNGGGLVTRLRYPVCGSP 113

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQH 481
           WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++EA+VM +L+H
Sbjct: 2   WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH 61
Query: 482 QNLVQLYGVCSKHRPIYIVTDTSS 505
           + LVQLY V S+  PIYIVT+  S
Sbjct: 62  EKLVQLYAVVSEE-PIYIVTEYMS 84

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 336 GCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHR 394
           G F+VR S+   G YTL +  +     V+HY I  ++  +  + E+    ++ ++V ++ 
Sbjct: 102 GLFLVRESTNYPGDYTLCVSCE---GKVEHYRIMYHA-SKLSIDEEVYFENLMQLVEHYT 157
Query: 395 HNSGGLASRL-KTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS 453
            ++ GL +RL K    +  V A        W ++  EL LL+ +G G+FG V  G +RG+
Sbjct: 158 TDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGN 217
Query: 454 IDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHR-PIYIVTD 502
                  +   +   F+ EA VMT+L+H NLVQL GV  + +  +YIVT+
Sbjct: 218 KVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267

>pdb|1LUI|A Chain A, Nmr Structures Of Itk Sh2 Domain, Pro287cis Isoform, Ensemble Of 20 Low Energy Structures Length = 110

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQ--NSRGEFFLSEKHCCHSIPE 388
           KEG F+VR+S T G YT+S++TK     +P +KHYHIK+  +S   ++++EK+   SIP 
Sbjct: 28  KEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPL 87
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
           ++ YH++N GGL +RL+   C
Sbjct: 88  LIQYHQYNGGGLVTRLRYPVC 108

>pdb|2ETZ|A Chain A, The Nmr Minimized Average Structure Of The Itk Sh2 Domain Bound To A Phosphopeptide Length = 109

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQ--NSRGEFFLSEKHCCHSIPE 388
           KEG F+VR+S T G YT+S++TK     +P +KHYHIK+  +S   ++++EK+   SIP 
Sbjct: 28  KEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPL 87
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
           ++ YH++N GGL +RL+   C
Sbjct: 88  LIQYHQYNGGGLVTRLRYPVC 108

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRL 479
           D WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++EA+VM +L
Sbjct: 1   DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL 60
Query: 480 QHQNLVQLYGVCSKHRPIYIVTDTSS 505
           +H+ LVQLY V S+  PI IVT+  S
Sbjct: 61  RHEKLVQLYAVVSEE-PIXIVTEYMS 85

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTR 478
            D WE+    L L+E LG+GQ G V  G + G   VA+  +K+G+MS D F+ EA +M +
Sbjct: 5   EDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 64
Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
           LQHQ LV+LY V ++  PIYI+T+
Sbjct: 65  LQHQRLVRLYAVVTQE-PIYIITE 87

>pdb|2K79|B Chain B, Solution Structure Of The Binary Complex Between The Sh3 And Sh2 Domain Of Interleukin-2 Tyrosine Kinase Length = 110

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 334 KEGCFVVRNSSTKGLYTLSLYTKV---PHPHVKHYHIKQ--NSRGEFFLSEKHCCHSIPE 388
           KEG F+VR+S T G YT+S++TK     +P +KHYHIK+  +S   ++++EK+   SIP 
Sbjct: 29  KEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPL 88
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
           ++ YH++N GGL +RL+   C
Sbjct: 89  LIQYHQYNGGGLVTRLRYPVC 109

>pdb|1GL5|A Chain A, Nmr Structure Of The Sh3 Domain From The Tec Protein Tyrosine Kinase Length = 67

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELL 184
            ++VVA+Y F+A E  DL LE+G EY +++    HWW+ +DK GS GYIPSNYV  K+  
Sbjct: 2   SEIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKKSN 61
Query: 185 GLQKYD 190
            L +YD
Sbjct: 62  NLDQYD 67

>pdb|2DM0|A Chain A, Solution Structure Of The Sh2 Domain Of Human Tyrosine- Protein Kinase Txk Length = 125

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/77 (41%), Positives = 53/77 (68%), Gaps = 3/77 (3%)
Query: 332 KDKEGCFVVRNSSTKGLYTLSLYT---KVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           + KEG F+VR+S   G YT+S++    +     +KHY IK+N  G+++++E+H   SIPE
Sbjct: 35  ESKEGAFIVRDSRHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHAFQSIPE 94
Query: 389 VVNYHRHNSGGLASRLK 405
           ++ YH+HN+ GL +RL+
Sbjct: 95  LIWYHQHNAAGLMTRLR 111

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 19/181 (10%)
Query: 328 IPEVKDKEGCFVVRNSSTKGLYTLS-LYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSI 386
           + E+    G F+VR S  K  Y LS L+  +P    +H+ I+  S    +  E     SI
Sbjct: 25  VAELLVHSGDFLVRESQGKQEYVLSVLWDGLP----RHFIIQ--SLDNLYRLEGEGFPSI 78
Query: 387 PEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVR 446
           P ++++       L  +       R VP       DKW ++  +L+L E++G G FG V 
Sbjct: 79  PLLIDHLLSTQQPLTKKSGVV-LHRAVP------KDKWVLNHEDLVLGEQIGRGNFGEVF 131
Query: 447 RGKWRGSIDVAMMKEG--TMSED---DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
            G+ R    +  +K    T+  D    F++EA+++ +  H N+V+L GVC++ +PIYIV 
Sbjct: 132 SGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191
Query: 502 D 502
           +
Sbjct: 192 E 192

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 19/181 (10%)
Query: 328 IPEVKDKEGCFVVRNSSTKGLYTLS-LYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSI 386
           + E+    G F+VR S  K  Y LS L+  +P    +H+ I+  S    +  E     SI
Sbjct: 25  VAELLVHSGDFLVRESQGKQEYVLSVLWDGLP----RHFIIQ--SLDNLYRLEGEGFPSI 78
Query: 387 PEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVR 446
           P ++++       L  +       R VP       DKW ++  +L+L E++G G FG V 
Sbjct: 79  PLLIDHLLSTQQPLTKKSGVV-LHRAVP------KDKWVLNHEDLVLGEQIGRGNFGEVF 131
Query: 447 RGKWRGSIDVAMMKEG--TMSED---DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
            G+ R    +  +K    T+  D    F++EA+++ +  H N+V+L GVC++ +PIYIV 
Sbjct: 132 SGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191
Query: 502 D 502
           +
Sbjct: 192 E 192

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRL 479
           D WEI    L L ++LG+GQFG V    +     VA+  MK G+MS + F+ EA VM  L
Sbjct: 8   DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL 67
Query: 480 QHQNLVQLYGVCSKHRPIYIVTD 502
           QH  LV+L+ V +K  PIYI+T+
Sbjct: 68  QHDKLVKLHAVVTKE-PIYIITE 89

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 43/53 (81%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
           + Y +F+++SDVW++GV++WE+FT GK P+ +L NTEV++ + +G +LE+P+ 
Sbjct: 207 IMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRV 259

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 430 ELMLLEELGSGQFGVVRRG--------KWRGSIDVAMMKEGTMS-EDDFIEEAKVMTRLQ 480
           +++L  ELG G FG V           K +  + V  +K+ T++   DF  EA+++T LQ
Sbjct: 16  DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ 75
Query: 481 HQNLVQLYGVCSKHRPIYIV 500
           H+++V+ YGVC    P+ +V
Sbjct: 76  HEHIVKFYGVCGDGDPLIMV 95

>pdb|1QLY|A Chain A, Nmr Study Of The Sh3 Domain From Bruton's Tyrosine Kinase, 20 Structures Length = 58

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
           K VVALY +  +   DL L KG EY +++++   WW+ +DKNG  GYIPSNYV E E
Sbjct: 2   KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE 58

>pdb|1AWW|A Chain A, Sh3 Domain From Bruton's Tyrosine Kinase, Nmr, 42 Structures Length = 67

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
           K VVALY +  +   DL L KG EY +++++   WW+ +DKNG  GYIPSNYV E E
Sbjct: 9   KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE 65

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 41/51 (80%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
           Y +F+++SDVW++GV++WE+FT GK P+ +L NTE +D + +G  LE+P+A
Sbjct: 234 YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA 284

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 430 ELMLLEELGSGQFGVVRRGKW--------RGSIDVAMMKEGTMS-EDDFIEEAKVMTRLQ 480
           +++L  ELG G FG V   +         +  + V  +KE + S   DF  EA+++T LQ
Sbjct: 42  DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ 101
Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
           HQ++V+ +GVC++ RP+ +V +
Sbjct: 102 HQHIVRFFGVCTEGRPLLMVFE 123

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 41/51 (80%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
           Y +F+++SDVW++GV++WE+FT GK P+ +L NTE +D + +G  LE+P+A
Sbjct: 211 YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA 261

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 430 ELMLLEELGSGQFGVVRRGKW--------RGSIDVAMMKEGTMS-EDDFIEEAKVMTRLQ 480
           +++L  ELG G FG V   +         +  + V  +KE + S   DF  EA+++T LQ
Sbjct: 19  DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ 78
Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
           HQ++V+ +GVC++ RP+ +V +
Sbjct: 79  HQHIVRFFGVCTEGRPLLMVFE 100

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 41/51 (80%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
           Y +F+++SDVW++GV++WE+FT GK P+ +L NTE +D + +G  LE+P+A
Sbjct: 205 YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA 255

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 430 ELMLLEELGSGQFGVVRRGKW--------RGSIDVAMMKEGTMS-EDDFIEEAKVMTRLQ 480
           +++L  ELG G FG V   +         +  + V  +KE + S   DF  EA+++T LQ
Sbjct: 13  DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ 72
Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
           HQ++V+ +GVC++ RP+ +V +
Sbjct: 73  HQHIVRFFGVCTEGRPLLMVFE 94

>pdb|2YUQ|A Chain A, Solution Structure Of The Sh3 Domain Of Human Tyrosine- Protein Kinase ItkTSK Length = 85

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 48/74 (64%)
Query: 117 RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
           R+P       VV+ALY ++  +  +L+L +  EY ++D ++ HWW+V+D+NG  GY+PS+
Sbjct: 11  RRPLWEPEETVVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSS 70
Query: 177 YVKEKELLGLQKYD 190
           Y+ EK    L+ Y+
Sbjct: 71  YLVEKSPNNLETYE 84

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSE----DDFIEEAKV 475
           I   +L LLE+LG G FGVVRRG+W        S+ V  +K   +S+    DDFI E   
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
           M  L H+NL++LYGV     P+ +VT+ +   LG L D
Sbjct: 65  MHSLDHRNLIRLYGVVLTP-PMKMVTELAP--LGSLLD 99

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSE----DDFIEEAKV 475
           I   +L LLE+LG G FGVVRRG+W        S+ V  +K   +S+    DDFI E   
Sbjct: 9   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
           M  L H+NL++LYGV     P+ +VT+ +   LG L D
Sbjct: 69  MHSLDHRNLIRLYGVVLTP-PMKMVTELAP--LGSLLD 103

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSE----DDFIEEAKV 475
           I   +L LLE+LG G FGVVRRG+W        S+ V  +K   +S+    DDFI E   
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
           M  L H+NL++LYGV     P+ +VT+ +   LG L D
Sbjct: 65  MHSLDHRNLIRLYGVVLTP-PMKMVTELAP--LGSLLD 99

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSE----DDFIEEAKV 475
           I   +L LLE+LG G FGVVRRG+W        S+ V  +K   +S+    DDFI E   
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
           M  L H+NL++LYGV     P+ +VT+ +   LG L D
Sbjct: 65  MHSLDHRNLIRLYGVVLTP-PMKMVTELAP--LGSLLD 99

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSE----DDFIEEAKV 475
           I   +L LLE+LG G FGVVRRG+W        S+ V  +K   +S+    DDFI E   
Sbjct: 9   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
           M  L H+NL++LYGV     P+ +VT+ +   LG L D
Sbjct: 69  MHSLDHRNLIRLYGVVLTP-PMKMVTELAP--LGSLLD 103

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSE----DDFIEEAKV 475
           I   +L LLE+LG G FGVVRRG+W        S+ V  +K   +S+    DDFI E   
Sbjct: 15  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
           M  L H+NL++LYGV     P+ +VT+ +   LG L D
Sbjct: 75  MHSLDHRNLIRLYGVVLTP-PMKMVTELAP--LGSLLD 109

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSE----DDFIEEAKV 475
           I   +L LLE+LG G FGVVRRG+W        S+ V  +K   +S+    DDFI E   
Sbjct: 15  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFRLGLLAD 513
           M  L H+NL++LYGV     P+ +VT+ +   LG L D
Sbjct: 75  MHSLDHRNLIRLYGVVLTP-PMKMVTELAP--LGSLLD 109

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 40/51 (78%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKA 256
           Y +F+++SDVW+ GV++WE+FT GK P+ +L N EV++ + +G +L++P+ 
Sbjct: 204 YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRT 254

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
           + +NY +FSSKSDVW++GVLMWE F+ G+ PY  +K +EV   +++G
Sbjct: 543 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 589

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 118/304 (38%), Gaps = 64/304 (21%)
Query: 245 VQRGIILEKPK-------------AWYVGDMSRQRAESI-LKQEDKEGCFVVRNSSTKGL 290
           +++ II +KP+              W+ G +SR+ +E I L      G F++R     G 
Sbjct: 144 LEQAIISQKPQLEKLIATTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGS 203
Query: 291 YTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD-----KEGCFVVRNSST 345
           Y L L   +    V HY I ++  G+  + E     ++ ++ +      +G   V     
Sbjct: 204 YALCL---LHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKADGLLRVLTVPC 260
Query: 346 KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK 405
           + + T         P +   H    S G      K   +S P+    HR +S    +R +
Sbjct: 261 QKIGTQGNVNFGGRPQLPGSHPATWSAGGIISRIK--SYSFPKPG--HRKSSPAQGNRQE 316
Query: 406 TSPCDRPV-PATAGLSHDKW---------------------EIDPAE------LMLLE-- 435
           ++    P  P  A  + DK                      EI P E      L+ LE  
Sbjct: 317 STVSFNPYEPELAPWAADKGPQREALPMDTEVYESPYADPEEIRPKEVYLDRKLLTLEDK 376
Query: 436 ELGSGQFGVVRRGKWRGSIDVAMMKEGTMS--------EDDFIEEAKVMTRLQHQNLVQL 487
           ELGSG FG V++G ++    V  +    +         +D+ + EA VM +L +  +V++
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 488 YGVC 491
            G+C
Sbjct: 437 IGIC 440

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
           + +NY +FSSKSDVW++GVLMWE F+ G+ PY  +K +EV   +++G
Sbjct: 542 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 588

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 118/304 (38%), Gaps = 64/304 (21%)
Query: 245 VQRGIILEKPK-------------AWYVGDMSRQRAESI-LKQEDKEGCFVVRNSSTKGL 290
           +++ II +KP+              W+ G +SR+ +E I L      G F++R     G 
Sbjct: 143 LEQAIISQKPQLEKLIATTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGS 202
Query: 291 YTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD-----KEGCFVVRNSST 345
           Y L L   +    V HY I ++  G+  + E     ++ ++ +      +G   V     
Sbjct: 203 YALCL---LHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKADGLLRVLTVPC 259
Query: 346 KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK 405
           + + T         P +   H    S G      K   +S P+    HR +S    +R +
Sbjct: 260 QKIGTQGNVNFGGRPQLPGSHPATWSAGGIISRIK--SYSFPKPG--HRKSSPAQGNRQE 315
Query: 406 TSPCDRPV-PATAGLSHDKW---------------------EIDPAE------LMLLE-- 435
           ++    P  P  A  + DK                      EI P E      L+ LE  
Sbjct: 316 STVSFNPYEPELAPWAADKGPQREALPMDTEVFESPFADPEEIRPKEVYLDRKLLTLEDK 375
Query: 436 ELGSGQFGVVRRGKWRGSIDVAMMKEGTMS--------EDDFIEEAKVMTRLQHQNLVQL 487
           ELGSG FG V++G ++    V  +    +         +D+ + EA VM +L +  +V++
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 488 YGVC 491
            G+C
Sbjct: 436 IGIC 439

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
           + +NY +FSSKSDVW++GVLMWE F+ G+ PY  +K +EV   +++G
Sbjct: 198 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 244

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
           + +NY +FSSKSDVW++GVLMWE F+ G+ PY  +K +EV   +++G
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 246

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
           + +NY +FSSKSDVW++GVLMWE F+ G+ PY  +K +EV   +++G
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 246

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
           + +NY +FSSKSDVW++GVLMWE F+ G+ PY  +K +EV   +++G
Sbjct: 190 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 236

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
           + +NY +FSSKSDVW++GVLMWE F+ G+ PY  +K +EV   +++G
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 230

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
           + +NY +FSSKSDVW++GVLMWE F+ G+ PY  +K +EV   +++G
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 230

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
           + +NY +FSSKSDVW++GVLMWE F+ G+ PY  +K +EV   +++G
Sbjct: 178 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 224

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
           + +NY +FSSKSDVW++GVLMWE F+ G+ PY  +K +EV   +++G
Sbjct: 180 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 226

>pdb|2LMJ|A Chain A, Itk-Sh3 Length = 66

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 41/55 (74%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
           VV+ALY ++  +  +L+L +  EY ++D ++ HWW+V+D+NG  GY+PS+Y+ EK
Sbjct: 10  VVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSSYLVEK 64

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQN 483
           W ++  EL LL+ +G G+FG V  G +RG+       +   +   F+ EA VMT+L+H N
Sbjct: 16  WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSN 75
Query: 484 LVQLYGVCSKHR-PIYIVTD 502
           LVQL GV  + +  +YIVT+
Sbjct: 76  LVQLLGVIVEEKGGLYIVTE 95

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQN 483
           W ++  EL LL+ +G G+FG V  G +RG+       +   +   F+ EA VMT+L+H N
Sbjct: 1   WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSN 60
Query: 484 LVQLYGVCSKHR-PIYIVTD 502
           LVQL GV  + +  +YIVT+
Sbjct: 61  LVQLLGVIVEEKGGLYIVTE 80

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQN 483
           W ++  EL LL+ +G G+FG V  G +RG+       +   +   F+ EA VMT+L+H N
Sbjct: 7   WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSN 66
Query: 484 LVQLYGVCSKHR-PIYIVTD 502
           LVQL GV  + +  +YIVT+
Sbjct: 67  LVQLLGVIVEEKGGLYIVTE 86

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + +N+ +FSS+SDVW+YGV MWE  + G+ PY ++K  EV+  +++G  +E P
Sbjct: 509 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 561

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 58/268 (21%)
Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNSSTKGLYTLSL-YTKVPHPHVKHYHIKQNSR 314
           WY   ++R+ AE  L      +G F++R    +G Y LSL Y K     V HY I Q+  
Sbjct: 163 WYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKT----VYHYLISQDKA 218
Query: 315 GEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 374
           G      K+C   IPE            +    L+ L  Y K+    + +   +      
Sbjct: 219 G------KYC---IPE-----------GTKFDTLWQLVEYLKLKADGLIYCLKEACPNSS 258
Query: 375 FFLSEKHCCHSIPEVVNYHRH--------NSGGLA---SRLKTSPCDRPVPATAGLSHDK 423
              +      ++P   +   H        NS G     +R+ +    RP+P    +    
Sbjct: 259 ASNASGAAAPTLPAHPSTLTHPQRRIDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESP 318
Query: 424 WEIDPAEL----MLLE---------ELGSGQFGVVRRGKWR---GSIDVAM--MKEGTMS 465
           +  DP EL    + L+         ELG G FG VR+G +R     IDVA+  +K+GT  
Sbjct: 319 FS-DPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK 377
Query: 466 ED--DFIEEAKVMTRLQHQNLVQLYGVC 491
            D  + + EA++M +L +  +V+L GVC
Sbjct: 378 ADTEEMMREAQIMHQLDNPYIVRLIGVC 405

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + +N+ +FSS+SDVW+YGV MWE  + G+ PY ++K  EV+  +++G  +E P
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 235

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 7/63 (11%)
Query: 436 ELGSGQFGVVRRGKWR---GSIDVAM--MKEGTMSED--DFIEEAKVMTRLQHQNLVQLY 488
           ELG G FG VR+G +R     IDVA+  +K+GT   D  + + EA++M +L +  +V+L 
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 489 GVC 491
           GVC
Sbjct: 77  GVC 79

>pdb|1AWJ|A Chain A, Intramolecular Itk-Proline Complex, Nmr, Minimized Average Structure Length = 77

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 112 DKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVG 171
           ++   ++P++ +    V+ALY ++  +  +L+L    EY ++D ++ HWW+V+DKNG  G
Sbjct: 11  NRRSFQEPEETL----VIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEG 66
Query: 172 YIPSNYVKEK 181
           Y PS+Y+ EK
Sbjct: 67  YAPSSYLVEK 76

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + ++Y +F+S SDVW++G++MWEV T G+ PY  L N EV+  +  G  L  P
Sbjct: 220 EAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP 272

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGS-------IDVAMMKEGTMSED--DFIEEAKV 475
           EI P+ +   + +G+G+FG V +G  + S       + +  +K G   +   DF+ EA +
Sbjct: 40  EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 99
Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           M +  H N+++L GV SK++P+ I+T+
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITE 126

>pdb|2K79|A Chain A, Solution Structure Of The Binary Complex Between The Sh3 And Sh2 Domain Of Interleukin-2 Tyrosine Kinase Length = 63

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
           +V+ALY ++  +  +L+L    EY ++D ++ HWW+V+DKNG  GY PS+Y+ EK
Sbjct: 7   LVIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVEK 61

>pdb|2RN8|A Chain A, Nmr Structure Note: Murine Itk Sh3 Domain Length = 64

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
           +V+ALY ++  +  +L+L    EY ++D ++ HWW+V+DKNG  GY PS+Y+ EK
Sbjct: 7   LVIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVEK 61

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + LNY+ +++ SDVW+YGVL+WE+ + G  PY  +   E+ +++ +G  LEKP
Sbjct: 201 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 253

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + LNY+ +++ SDVW+YGVL+WE+ + G  PY  +   E+ +++ +G  LEKP
Sbjct: 211 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 263

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + LNY+ +++ SDVW+YGVL+WE+ + G  PY  +   E+ +++ +G  LEKP
Sbjct: 208 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 260

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG++MWEV + G+ PY  + N +V+  ++ G  L  P
Sbjct: 218 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAP 270

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR--GSIDVAM----MKEGTMSED--DFIEEAKVM 476
           E+D + + +   +G+G+FG V  G+ +  G  DVA+    +K G   +   DF+ EA +M
Sbjct: 39  ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIM 98
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N+V L GV ++ +P+ IV +
Sbjct: 99  GQFDHPNVVHLEGVVTRGKPVMIVIE 124

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF+S SDVW +GV MWE+   G  P+  +KN +V+ R++ G  L  P
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 614

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF+S SDVW +GV MWE+   G  P+  +KN +V+ R++ G  L  P
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 614

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 249 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 295

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           Y R++++SDVWAYGV++WE+F+ G  PY  + + EV+  V+ G IL  P+
Sbjct: 250 YNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPE 299

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 263 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 309

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG++MWEV + G+ PY  + N +V+  ++ G  L  P
Sbjct: 189 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPP 241

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSED--DFIEEAKVM 476
           EID + + + + +G G+FG V  G+ +        + +  +K G   +   DF+ EA +M
Sbjct: 10  EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N++ L GV +K +P+ I+T+
Sbjct: 70  GQFDHPNIIHLEGVVTKCKPVMIITE 95

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 269

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
           D  E+    + L+  LG G FG V  G+  G         + V  + E    +D  DF+ 
Sbjct: 24  DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           EA ++++L HQN+V+  GV  +  P +I+ +
Sbjct: 84  EALIISKLNHQNIVRCIGVSLQSLPRFILLE 114

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG++MWEV + G+ PY  + N +V+  ++ G  L  P
Sbjct: 204 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPP 256

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSED--DFIEEAKVM 476
           EID + + + + +G G+FG V  G+ +        + +  +K G   +   DF+ EA +M
Sbjct: 25  EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 84
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N++ L GV +K +P+ I+T+
Sbjct: 85  GQFDHPNIIHLEGVVTKCKPVMIITE 110

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 229 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 275

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 239 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 285

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 269

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 269

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 283

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG++MWEV + G+ PY  + N +V+  ++ G  L  P
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPP 235

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVAMMKEGTMSED--DFIEEAKVM 476
           EID + + + + +G G+FG V  G+ +        + +  +K G   +   DF+ EA +M
Sbjct: 4   EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N++ L GV +K +P+ I+T+
Sbjct: 64  GQFDHPNIIHLEGVVTKCKPVMIITE 89

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 240 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 286

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 283

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 283

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
           D  E+    + L+  LG G FG V  G+  G         + V  + E    +D  DF+ 
Sbjct: 38  DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           EA ++++L HQN+V+  GV  +  P +I+ +
Sbjct: 98  EALIISKLNHQNIVRCIGVSLQSLPRFILLE 128

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + + +F+S SDVW+YG++MWEV + G+ PY  + N +V+  V+ G  L  P
Sbjct: 197 EAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSP 249

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGS------IDVAMMKEGTMSED--DFIEEAKVM 476
           EI+ + + +   +G+G+FG V  G+ +        + +  +K G   +   DF+ EA +M
Sbjct: 18  EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIM 77
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N++ L GV +K +P+ IVT+
Sbjct: 78  GQFDHPNIIHLEGVVTKSKPVMIVTE 103

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF+S SDVW +GV MWE+   G  P+  +KN +V+ R++ G  L  P
Sbjct: 186 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 236

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 222 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 268

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 222 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 268

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 214 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 260

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF+S SDVW +GV MWE+   G  P+  +KN +V+ R++ G  L  P
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF+S SDVW +GV MWE+   G  P+  +KN +V+ R++ G  L  P
Sbjct: 181 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 231

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF+S SDVW +GV MWE+   G  P+  +KN +V+ R++ G  L  P
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 239

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF+S SDVW +GV MWE+   G  P+  +KN +V+ R++ G  L  P
Sbjct: 212 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 262

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF+S SDVW +GV MWE+   G  P+  +KN +V+ R++ G  L  P
Sbjct: 187 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 237

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF+S SDVW +GV MWE+   G  P+  +KN +V+ R++ G  L  P
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF+S SDVW +GV MWE+   G  P+  +KN +V+ R++ G  L  P
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF+S SDVW +GV MWE+   G  P+  +KN +V+ R++ G  L  P
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 180 EKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT 239
           +K+LL  +    +  + LE IH    + +++ +SDVW+YGV +WE+ T G  PY  L+  
Sbjct: 187 DKQLLYSEAKTPIKWMALESIH----FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA 242
Query: 240 EVVDRVQRGIILEKPK 255
           EV D +++G  L +P+
Sbjct: 243 EVPDLLEKGERLAQPQ 258

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG++MWEV + G+ PY  + N +V++ +++   L  P
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPP 262

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVV------RRGKWRGSIDVAMMKEGTMSED--DFIEEAKVM 476
           EID + + + + +G+G+FG V        GK    + +  +K G   +   DF+ EA +M
Sbjct: 29  EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 88
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N++ L GV +K  P+ I+T+
Sbjct: 89  GQFDHPNVIHLEGVVTKSTPVMIITE 114

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 180 EKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT 239
           +K+LL  +    +  + LE IH    + +++ +SDVW+YGV +WE+ T G  PY  L+  
Sbjct: 169 DKQLLYSEAKTPIKWMALESIH----FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA 224
Query: 240 EVVDRVQRGIILEKPK 255
           EV D +++G  L +P+
Sbjct: 225 EVPDLLEKGERLAQPQ 240

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG++MWEV + G+ PY  + N +V++ +++   L  P
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPP 236

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRG------KWRGSIDVAMMKEGTMSED--DFIEEAKVM 476
           EID + + + + +G+G+FG V  G      K    + +  +K G   +   DF+ EA +M
Sbjct: 3   EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 62
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N++ L GV +K  P+ I+T+
Sbjct: 63  GQFDHPNVIHLEGVVTKSTPVMIITE 88

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + +  FSS SDVW++GV+MWEV   G+ PY  + N +V+  V+ G  L  P
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAP 276

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 414 PATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWR--GSIDVAM----MKEGTMSED 467
           P  AG S  + EI+ + + + + +GSG  G V  G+ R  G  DV +    +K G     
Sbjct: 35  PGRAGRSFTR-EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ 93
Query: 468 --DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
             DF+ EA +M +  H N+++L GV ++ R   IVT+
Sbjct: 94  RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE 130

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + +  FSS SDVW++GV+MWEV   G+ PY  + N +V+  V+ G  L  P
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAP 276

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 414 PATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWR--GSIDVAM----MKEGTMSED 467
           P  AG S  + EI+ + + + + +GSG  G V  G+ R  G  DV +    +K G     
Sbjct: 35  PGRAGRSFTR-EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ 93
Query: 468 --DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
             DF+ EA +M +  H N+++L GV ++ R   IVT+
Sbjct: 94  RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE 130

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG+++WEV + G+ PY  + N +V+  V  G  L  P
Sbjct: 218 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 270

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
           E+D   + + + +G+G+FG V  G+ +       S+ +  +K G   +   DF+ EA +M
Sbjct: 39  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N+++L GV +K +P+ IVT+
Sbjct: 99  GQFDHPNIIRLEGVVTKSKPVMIVTE 124

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG+++WEV + G+ PY  + N +V+  V  G  L  P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
           E+D   + + + +G+G+FG V  G+ +       S+ +  +K G   +   DF+ EA +M
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG+++WEV + G+ PY  + N +V+  V  G  L  P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
           E+D   + + + +G+G+FG V  G+ +       S+ +  +K G   +   DF+ EA +M
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG+++WEV + G+ PY  + N +V+  V  G  L  P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
           E+D   + + + +G+G+FG V  G+ +       S+ +  +K G   +   DF+ EA +M
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG+++WEV + G+ PY  + N +V+  V  G  L  P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
           E+D   + + + +G+G+FG V  G+ +       S+ +  +K G   +   DF+ EA +M
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG+++WEV + G+ PY  + N +V+  V  G  L  P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
           E+D   + + + +G+G+FG V  G+ +       S+ +  +K G   +   DF+ EA +M
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG+++WEV + G+ PY  + N +V+  V  G  L  P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
           E+D   + + + +G+G+FG V  G+ +       S+ +  +K G   +   DF+ EA +M
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF++ SDVW + V MWE+ + GK P+  L+N +V+  +++G  L KP
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKP 236

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG+++WEV + G+ PY  + N +V+  V  G  L  P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
           E+D   + + + +G+G+FG V  G+ +       S+ +  +K G   +   DF+ EA +M
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF++ SDVW + V MWE+ + GK P+  L+N +V+  +++G  L KP
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKP 232

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG+++WEV + G+ PY  + N +V+  V  G  L  P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
           E+D   + + + +G+G+FG V  G+ +       S+ +  +K G   +   DF+ EA +M
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF++ SDVW + V MWE+ + GK P+  L+N +V+  +++G  L KP
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKP 248

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG+++WEV + G+ PY  + N +V+  V  G  L  P
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
           E+D   + + + +G+G+FG V  G+ +       S+ +  +K G   +   DF+ EA +M
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N+++L GV +K +P+ IVT+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTE 126

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG+++WEV + G+ PY  + N +V+  V  G  L  P
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 243

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
           E+D   + + + +G+G+FG V  G+ +       S+ +  +K G   +   DF+ EA +M
Sbjct: 12  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N+++L GV +K +P+ IVT+
Sbjct: 72  GQFDHPNIIRLEGVVTKSKPVMIVTE 97

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG+++WEV + G+ PY  + N +V+  V  G  L  P
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 243

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
           E+D   + + + +G+G+FG V  G+ +       S+ +  +K G   +   DF+ EA +M
Sbjct: 12  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N+++L GV +K +P+ IVT+
Sbjct: 72  GQFDHPNIIRLEGVVTKSKPVMIVTE 97

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + Y +F+S SDVW+YG+++WEV + G+ PY  + N +V+  V  G  L  P
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 260

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR------GSIDVAMMKEGTMSED--DFIEEAKVM 476
           E+D   + + + +G+G+FG V  G+ +       S+ +  +K G   +   DF+ EA +M
Sbjct: 29  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +  H N+++L GV +K +P+ IVT+
Sbjct: 89  GQFDHPNIIRLEGVVTKSKPVMIVTE 114

>pdb|3H0H|A Chain A, Human Fyn Sh3 Domain R96i Mutant, Crystal Form I Length = 73

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY ++AI   DLS  KG ++++++ ++  WW+ +    G  GYIPSNYV
Sbjct: 19  VALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 69

>pdb|1EFN|A Chain A, Hiv-1 Nef Protein In Complex With R96i Mutant Fyn Sh3 Domain Length = 59

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY ++AI   DLS  KG ++++++ ++  WW+ +    G  GYIPSNYV
Sbjct: 4   VALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 54

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA---MMKEGTMSE--DDFIE 471
             +  D  +I   +L + E++G+G FG V R +W GS DVA   +M++   +E  ++F+ 
Sbjct: 25  GAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNEFLR 83
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           E  +M RL+H N+V   G  ++   + IVT+
Sbjct: 84  EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA---MMKEGTMSE--DDFIE 471
             +  D  +I   +L + E++G+G FG V R +W GS DVA   +M++   +E  ++F+ 
Sbjct: 25  GAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNEFLR 83
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           E  +M RL+H N+V   G  ++   + IVT+
Sbjct: 84  EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114

>pdb|2HDA|A Chain A, Yes Sh3 Domain Length = 64

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           + VALY ++A    DLS +KG  ++++++T+  WW+ +    G  GYIPSNYV
Sbjct: 7   IFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKNGYIPSNYV 59

>pdb|2YT6|A Chain A, Solution Structure Of The Sh3_1 Domain Of Yamaguchi Sarcoma Viral (V-Yes) Oncogene Homolog 1 Length = 109

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           + VALY ++A    DLS +KG  ++++++T+  WW+ +    G  GYIPSNYV
Sbjct: 29  IFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYV 81

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 192 VNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIIL 251
           +  + LE IH    Y +F+ +SDVW+YGV +WE+ T G  PY  +   E+ D +++G  L
Sbjct: 183 IKWMALECIH----YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERL 238
Query: 252 EKP 254
            +P
Sbjct: 239 PQP 241

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-------RGSIDVAMMKE--GTMSEDDFIEEAKVMTRL 479
            EL  ++ LGSG FG V +G W       +  + + ++ E  G  +  +F++EA +M  +
Sbjct: 15  TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 74
Query: 480 QHQNLVQLYGVC 491
            H +LV+L GVC
Sbjct: 75  DHPHLVRLLGVC 86

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSE-DDFIEEAKVMTRLQHQNL 484
           ID  E+ + E +G G FGVV + KWR   DVA+ +  + SE   FI E + ++R+ H N+
Sbjct: 5   IDYKEIEVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESESERKAFIVELRQLSRVNHPNI 63
Query: 485 VQLYGVC 491
           V+LYG C
Sbjct: 64  VKLYGAC 70

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 195 LTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + LE IH    Y +F+ +SDVW+YGV +WE+ T G  PY  +   E+ D +++G  L +P
Sbjct: 209 MALECIH----YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQP 264

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 429 AELMLLEELGSGQFGVVRRGKW-------RGSIDVAMMKE--GTMSEDDFIEEAKVMTRL 479
            EL  ++ LGSG FG V +G W       +  + + ++ E  G  +  +F++EA +M  +
Sbjct: 38  TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 480 QHQNLVQLYGVC 491
            H +LV+L GVC
Sbjct: 98  DHPHLVRLLGVC 109

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSE-DDFIEEAKVMTRLQHQNL 484
           ID  E+ + E +G G FGVV + KWR   DVA+ +  + SE   FI E + ++R+ H N+
Sbjct: 6   IDYKEIEVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESESERKAFIVELRQLSRVNHPNI 64
Query: 485 VQLYGVC 491
           V+LYG C
Sbjct: 65  VKLYGAC 71

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK---AWY 258
           + + Y +FS  SD+W+YGV++WEVF+ G  PY    N +VV+ ++   +L  P    AW 
Sbjct: 217 EAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWV 276
Query: 259 VGDM 262
              M
Sbjct: 277 YALM 280

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMK---EGTMSEDDFIEEA 473
           EI  + +  +EELG  +FG V +G   G        ++ +  +K   EG + E+ F  EA
Sbjct: 22  EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE-FRHEA 80
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
            +  RLQH N+V L GV +K +P+ ++    S
Sbjct: 81  MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCS 112

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK---AWY 258
           + + Y +FS  SD+W+YGV++WEVF+ G  PY    N +VV+ ++   +L  P    AW 
Sbjct: 200 EAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWV 259
Query: 259 VGDM 262
              M
Sbjct: 260 YALM 263

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMK---EGTMSEDDFIEEA 473
           EI  + +  +EELG  +FG V +G   G        ++ +  +K   EG + E+ F  EA
Sbjct: 5   EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE-FRHEA 63
Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS 505
            +  RLQH N+V L GV +K +P+ ++    S
Sbjct: 64  MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCS 95

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + + +F+S SD W+YG++MWEV + G+ PY  + N +V++ +++   L  P
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPP 245

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGS------IDVAMMKEGTMSED--DFIEEAKVM 476
           EID + + + E +G+G+FG V RG+ +        + +  +K G       +F+ EA +M
Sbjct: 12  EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIM 71
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            + +H N+++L GV +   P+ I+T+
Sbjct: 72  GQFEHPNIIRLEGVVTNSMPVMILTE 97

>pdb|1WLP|B Chain B, Solution Structure Of The P22phox-P47phox Complex Length = 138

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 18/121 (14%)
Query: 77  ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNG---------IRKPDQMIRP 125
           A+  ++   G +++L  G   EV++ ++  WW  ++K K G         +  PD+   P
Sbjct: 15  AIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDP 74
Query: 126 KV------VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           +        VA+  + A+EG ++SL +G   EV+    + WW ++ K+   GY PS Y++
Sbjct: 75  EPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR-KDDVTGYFPSMYLQ 133
Query: 180 E 180
           +
Sbjct: 134 K 134

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 35/53 (66%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + + + +F+S SD W+YG++MWEV + G+ PY  + N +V++ +++   L  P
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPP 243

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGS------IDVAMMKEGTMSED--DFIEEAKVM 476
           EID + + + E +G+G+FG V RG+ +        + +  +K G       +F+ EA +M
Sbjct: 10  EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIM 69
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            + +H N+++L GV +   P+ I+T+
Sbjct: 70  GQFEHPNIIRLEGVVTNSMPVMILTE 95

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI---EEAKVMTRLQ 480
           WEI+ +E+ML   +GSG FG V +GKW G + V ++K    + + F     E  V+ + +
Sbjct: 31  WEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTR 90
Query: 481 HQNLVQLYGVCSKHRPIYIVT 501
           H N++   G  +K   + IVT
Sbjct: 91  HVNILLFMGYMTKDN-LAIVT 110

>pdb|3H0F|A Chain A, Crystal Structure Of The Human Fyn Sh3 R96w Mutant Length = 73

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY ++A    DLS  KG ++++++ ++  WW+ +    G  GYIPSNYV
Sbjct: 19  VALYDYEAWTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 69

>pdb|4AG2|C Chain C, Human Chymase - Fynomer Complex Length = 84

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY + A    DLS  KG +++++D     WW+ +    G  GYIPSNYV
Sbjct: 10  VALYDYNATRWTDLSFHKGEKFQILDGDSGDWWEARSLTTGETGYIPSNYV 60

>pdb|3UA6|A Chain A, Crystal Structure Of The Human Fyn Sh3 Domain Length = 64

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY ++A    DLS  KG ++++++ ++  WW+ +    G  GYIPSNYV
Sbjct: 9   VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 59

>pdb|1FYN|A Chain A, Phosphotransferase Length = 62

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY ++A    DLS  KG ++++++ ++  WW+ +    G  GYIPSNYV
Sbjct: 8   VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 58

>pdb|1M27|C Chain C, Crystal Structure Of SapFYNSH3SLAM TERNARY COMPLEX Length = 61

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY ++A    DLS  KG ++++++ ++  WW+ +    G  GYIPSNYV
Sbjct: 5   VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 55

>pdb|1A0N|B Chain B, Nmr Study Of The Sh3 Domain From Fyn Proto-Oncogene Tyrosine Kinase Complexed With The Synthetic Peptide P2l Corresponding To Residues 91-104 Of The P85 Subunit Of Pi3- Kinase, Family Of 25 Structures Length = 69

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY ++A    DLS  KG ++++++ ++  WW+ +    G  GYIPSNYV
Sbjct: 9   VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 59

>pdb|1AZG|B Chain B, Nmr Study Of The Sh3 Domain From Fyn Proto-Oncogene Tyrosine Kinase Kinase Complexed With The Synthetic Peptide P2l Corresponding To Residues 91-104 Of The P85 Subunit Of Pi3-Kinase, Minimized Average (Probmap) Structure Length = 67

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY ++A    DLS  KG ++++++ ++  WW+ +    G  GYIPSNYV
Sbjct: 7   VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 57

>pdb|3NHN|A Chain A, Crystal Structure Of The Src-Family Kinase Hck Sh3-Sh2-Linker Regulatory Region Length = 193

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPH--PHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
           G F++R+S +TKG Y+LS+    P     VKHY I+    G F++S +    ++ E+V++
Sbjct: 95  GSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDH 154
Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAEL 431
           ++  + GL  +L        VP  +      WE D  EL
Sbjct: 155 YKKGNDGLCQKLS-------VPCMSSKPQKPWEKDAWEL 186

>pdb|1SHF|A Chain A, Crystal Structure Of The Sh3 Domain In Human Fyn; Comparison Of The Three-Dimensional Structures Of Sh3 Domains In Tyrosine Kinases And Spectrin Length = 59

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY ++A    DLS  KG ++++++ ++  WW+ +    G  GYIPSNYV
Sbjct: 5   VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 55

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 408 PCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG-----KWRG---SIDVAMM 459
           P    V A   L   KWE     L+L + LG G+FG V +      K R    ++ V M+
Sbjct: 2   PLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML 61
Query: 460 KEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
           KE     +  D + E  V+ ++ H ++++LYG CS+  P+ ++ + + +
Sbjct: 62  KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY 110

>pdb|4D8D|A Chain A, Crystal Structure Of Hiv-1 Nef Fyn-sh3 R96w Variant Length = 58

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY ++A    DLS  KG ++++++ ++  WW+ +    G  GYIPSNYV
Sbjct: 5   VALYDYEAWTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 55

>pdb|1AVZ|C Chain C, V-1 Nef Protein In Complex With Wild Type Fyn Sh3 Domain Length = 57

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY ++A    DLS  KG ++++++ ++  WW+ +    G  GYIPSNYV
Sbjct: 4   VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 54

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 408 PCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG-----KWRG---SIDVAMM 459
           P    V A   L   KWE     L+L + LG G+FG V +      K R    ++ V M+
Sbjct: 2   PLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML 61
Query: 460 KEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
           KE     +  D + E  V+ ++ H ++++LYG CS+  P+ ++ + + +
Sbjct: 62  KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY 110

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           F++ SDVW++GV++WE+ T  + PY  L N +V+  V  G +L+KP
Sbjct: 239 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 284

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
           D+WE+   ++ +  ELG G FG+V  G  +G +              + A M+E      
Sbjct: 40  DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 95
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +F+ EA VM      ++V+L GV S+ +P  ++ +
Sbjct: 96  EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 130

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           F++ SDVW++GV++WE+ T  + PY  L N +V+  V  G +L+KP
Sbjct: 217 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 262

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
           D+WE+   ++ +  ELG G FG+V  G  +G +              + A M+E      
Sbjct: 18  DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 73
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +F+ EA VM      ++V+L GV S+ +P  ++ +
Sbjct: 74  EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           F++ SDVW++GV++WE+ T  + PY  L N +V+  V  G +L+KP
Sbjct: 207 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 252

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
           D+WE+   ++ +  ELG G FG+V  G  +G +              + A M+E      
Sbjct: 8   DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 63
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +F+ EA VM      ++V+L GV S+ +P  ++ +
Sbjct: 64  EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 98

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 408 PCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG-----KWRG---SIDVAMM 459
           P    V A   L   KWE     L+L + LG G+FG V +      K R    ++ V M+
Sbjct: 2   PLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML 61
Query: 460 KEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSF 506
           KE     +  D + E  V+ ++ H ++++LYG CS+  P+ ++ + + +
Sbjct: 62  KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY 110

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           F++ SDVW++GV++WE+ T  + PY  L N +V+  V  G +L+KP
Sbjct: 217 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 262

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
           D+WE+   ++ +  ELG G FG+V  G  +G +              + A M+E      
Sbjct: 18  DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 73
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +F+ EA VM      ++V+L GV S+ +P  ++ +
Sbjct: 74  EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           F++ SDVW++GV++WE+ T  + PY  L N +V+  V  G +L+KP
Sbjct: 210 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 255

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
           D+WE+   ++ +  ELG G FG+V  G  +G +              + A M+E      
Sbjct: 11  DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 66
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +F+ EA VM      ++V+L GV S+ +P  ++ +
Sbjct: 67  EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 101

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           F++ SDVW++GV++WE+ T  + PY  L N +V+  V  G +L+KP
Sbjct: 211 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 256

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
           D+WE+   ++ +  ELG G FG+V  G  +G +              + A M+E      
Sbjct: 12  DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 67
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +F+ EA VM      ++V+L GV S+ +P  ++ +
Sbjct: 68  EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 102

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           F++ SDVW++GV++WE+ T  + PY  L N +V+  V  G +L+KP
Sbjct: 208 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 253

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
           D+WE+   ++ +  ELG G FG+V  G  +G +              + A M+E      
Sbjct: 9   DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 64
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +F+ EA VM      ++V+L GV S+ +P  ++ +
Sbjct: 65  EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 99

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           F++ SDVW++GV++WE+ T  + PY  L N +V+  V  G +L+KP
Sbjct: 204 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 249

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
           D+WE+   ++ +  ELG G FG+V  G  +G +              + A M+E      
Sbjct: 5   DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 60
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +F+ EA VM      ++V+L GV S+ +P  ++ +
Sbjct: 61  EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 95

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           F++ SDVW++GV++WE+ T  + PY  L N +V+  V  G +L+KP
Sbjct: 202 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 247

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
           D+WE+   ++ +  ELG G FG+V  G  +G +              + A M+E      
Sbjct: 3   DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 58
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +F+ EA VM      ++V+L GV S+ +P  ++ +
Sbjct: 59  EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 93

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           F++ SDVW++GV++WE+ T  + PY  L N +V+  V  G +L+KP
Sbjct: 211 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 256

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
           D+WE+   ++ +  ELG G FG+V  G  +G +              + A M+E      
Sbjct: 12  DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 67
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +F+ EA VM      ++V+L GV S+ +P  ++ +
Sbjct: 68  EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 102

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           F++ SDVW++GV++WE+ T  + PY  L N +V+  V  G +L+KP
Sbjct: 204 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 249

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 18/99 (18%)
Query: 418 GLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGT 463
           G   D+WE+   ++ +  ELG G FG+V  G  +G +              + A M+E  
Sbjct: 1   GSVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 464 MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
               +F+ EA VM      ++V+L GV S+ +P  ++ +
Sbjct: 61  ----EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 95

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           F++ SDVW++GV++WE+ T  + PY  L N +V+  V  G +L+KP
Sbjct: 210 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 255

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI--------------DVAMMKEGTMSED 467
           D+WE+   ++ +  ELG G FG+V  G  +G +              + A M+E      
Sbjct: 11  DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---- 66
Query: 468 DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +F+ EA VM      ++V+L GV S+ +P  ++ +
Sbjct: 67  EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 101

>pdb|3UF4|A Chain A, Crystal Structure Of A Sh3 And Sh2 Domains Of Fyn Protein (Proto- Concogene Tyrosine-Protein Kinase Fyn) From Mus Musculus At 1.98 A Resolution Length = 164

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY ++A    DLS  KG ++++++ ++  WW+ +    G  GYIPSNYV
Sbjct: 8   VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 58

>pdb|3UF4|A Chain A, Crystal Structure Of A Sh3 And Sh2 Domains Of Fyn Protein (Proto- Concogene Tyrosine-Protein Kinase Fyn) From Mus Musculus At 1.98 A Resolution Length = 164

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 20/125 (16%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGD 261
           Q+LN    SS+ D W    L     T G+  Y        VD +Q        + WY G 
Sbjct: 30  QILN----SSEGDWWEARSL-----TTGETGYIPSNYVAPVDSIQ-------AEEWYFGK 73
Query: 262 MSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 317
           + R+ AE  +L   +  G F++R S +TKG Y+LS+  +      HVKHY I++   G +
Sbjct: 74  LGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDXKGDHVKHYKIRKLDNGGY 133
Query: 318 FLSEK 322
           +++ +
Sbjct: 134 YITTR 138

>pdb|1U5S|A Chain A, Nmr Structure Of The Complex Between Nck-2 Sh3 Domain And Pinch-1 Lim4 Domain Length = 71

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYV 178
           VV  LYPF ++   +L+ EKG   EV++  +    WWK K+  G VG +P NYV
Sbjct: 8   VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYV 61

>pdb|1G83|A Chain A, Crystal Structure Of Fyn Sh3-Sh2 Length = 165

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY ++A    DLS  KG ++++++ ++  WW+ +    G  GYIPSNYV
Sbjct: 7   VALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 57

>pdb|1G83|A Chain A, Crystal Structure Of Fyn Sh3-Sh2 Length = 165

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 20/125 (16%)
Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGD 261
           Q+LN    SS+ D W    L     T G+  Y        VD +Q        + WY G 
Sbjct: 29  QILN----SSEGDWWEARSL-----TTGETGYIPSNYVAPVDSIQ-------AEEWYFGK 72
Query: 262 MSRQRAE-SILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 317
           + R+ AE  +L   +  G F++R S +TKG Y+LS+  +  +   HVKHY I++   G +
Sbjct: 73  LGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGY 132
Query: 318 FLSEK 322
           +++ +
Sbjct: 133 YITTR 137

>pdb|1G83|A Chain A, Crystal Structure Of Fyn Sh3-Sh2 Length = 165

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 333 DKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV 389
           +  G F++R S +TKG Y+LS+  +  +   HVKHY I++   G ++++ +    ++ ++
Sbjct: 87  NPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQL 146
Query: 390 VNYHRHNSGGLASRL 404
           V ++   + GL+SRL
Sbjct: 147 VQHYSERAAGLSSRL 161

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
           P  AG+S        KWE    +L L + LG G FG V   +  G          ++ V 
Sbjct: 14  PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
           M+K+    ED  D + E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 74  MLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124

>pdb|2FRY|A Chain A, Solution Structure Of The Third Sh3 Domain Of Human Nck2 Adaptor Protein Length = 61

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYV 178
           VV  LYPF ++   +L+ EKG   EV++  +    WWK K+  G VG +P NYV
Sbjct: 4   VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYV 57

>pdb|1WX6|A Chain A, Solution Structure Of The Sh3 Domain Of The Human Cytoplasmic Protein Nck2 Length = 91

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYV 178
           VV  LYPF ++   +L+ EKG   EV++  +    WWK K+  G VG +P NYV
Sbjct: 19  VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYV 72

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           ++SKSDVWA+GV MWE+ T G  PY  ++N E+ D +  G  L++P+
Sbjct: 226 YTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPE 272

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
           S D WEI   ++ + + +GSG FG V +GKW G + V M+     +      F  E  V+
Sbjct: 1   SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
            + +H N++   G  +K + + IVT
Sbjct: 61  RKTRHVNILLFMGYSTKPQ-LAIVT 84

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
           S D WEI   ++ + + +GSG FG V +GKW G + V M+     +      F  E  V+
Sbjct: 4   SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
            + +H N++   G  +K + + IVT
Sbjct: 64  RKTRHVNILLFMGYSTKPQ-LAIVT 87

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
           S D WEI   ++ + + +GSG FG V +GKW G + V M+     +      F  E  V+
Sbjct: 4   SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
            + +H N++   G  +K + + IVT
Sbjct: 64  RKTRHVNILLFMGYSTKPQ-LAIVT 87

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
           S D WEI   ++ + + +GSG FG V +GKW G + V M+     +      F  E  V+
Sbjct: 19  SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 78
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
            + +H N++   G  +K + + IVT
Sbjct: 79  RKTRHVNILLFMGYSTKPQ-LAIVT 102

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
           S D WEI   ++ + + +GSG FG V +GKW G + V M+     +      F  E  V+
Sbjct: 3   SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 62
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
            + +H N++   G  +K + + IVT
Sbjct: 63  RKTRHVNILLFMGYSTKPQ-LAIVT 86

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
           S D WEI   ++ + + +GSG FG V +GKW G + V M+     +      F  E  V+
Sbjct: 15  SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
            + +H N++   G  +K + + IVT
Sbjct: 75  RKTRHVNILLFMGYSTKPQ-LAIVT 98

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
           S D WEI   ++ + + +GSG FG V +GKW G + V M+     +      F  E  V+
Sbjct: 27  SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
            + +H N++   G  +K + + IVT
Sbjct: 87  RKTRHVNILLFMGYSTKPQ-LAIVT 110

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
           S D WEI   ++ + + +GSG FG V +GKW G + V M+     +      F  E  V+
Sbjct: 27  SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
            + +H N++   G  +K + + IVT
Sbjct: 87  RKTRHVNILLFMGYSTKPQ-LAIVT 110

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
           S D WEI   ++ + + +GSG FG V +GKW G + V M+     +      F  E  V+
Sbjct: 26  SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 85
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
            + +H N++   G  +K + + IVT
Sbjct: 86  RKTRHVNILLFMGYSTKPQ-LAIVT 109

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
           +S+KSDVW+YGVL+WE+F+ G  PY G   + +   R++ G+ +  P+
Sbjct: 278 YSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPE 325

>pdb|1UEC|A Chain A, Crystal Structure Of Autoinhibited Form Of Tandem Sh3 Domain Of P47phox Length = 193

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 18/121 (14%)
Query: 77  ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNG---------IRKPDQMIRP 125
           A+  ++   G +++L  G   EV++ ++  WW  ++K K G         +  PD+   P
Sbjct: 16  AIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDP 75
Query: 126 KV------VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           +        VA+  + A+EG ++SL +G   EV+    + WW ++ K+   GY PS Y++
Sbjct: 76  EPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR-KDDVTGYFPSMYLQ 134
Query: 180 E 180
           +
Sbjct: 135 K 135

>pdb|1NG2|A Chain A, Structure Of Autoinhibited P47phox Length = 193

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 18/121 (14%)
Query: 77  ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNG---------IRKPDQMIRP 125
           A+  ++   G +++L  G   EV++ ++  WW  ++K K G         +  PD+   P
Sbjct: 16  AIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDP 75
Query: 126 KV------VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           +        VA+  + A+EG ++SL +G   EV+    + WW ++ K+   GY PS Y++
Sbjct: 76  EPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR-KDDVTGYFPSMYLQ 134
Query: 180 E 180
           +
Sbjct: 135 K 135

>pdb|1AOT|F Chain F, Nmr Structure Of The Fyn Sh2 Domain Complexed With A Phosphotyrosyl Peptide, Minimized Average Structure Length = 106

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 319 LSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEF 375
           L  K     +    +  G F++R S +TKG Y+LS+  +  +   HVKHY I++   G +
Sbjct: 12  LGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGY 71
Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRL 404
           +++ +    ++ ++V ++   + GL+SRL
Sbjct: 72  YITTRAQFETLQQLVQHYSERAAGLSSRL 100

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 17/94 (18%)
Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP------------K 255
           RF+ +SDVW+YGV +WE+ T G  PY  +   E+ D +++G  L +P            K
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVK 256
Query: 256 AWYVGDMSRQRAESILKQ-----EDKEGCFVVRN 284
            W +    R R   ++ +      D +   V++N
Sbjct: 257 CWMIDSECRPRFRELVSEFSRMARDPQRFVVIQN 290

>pdb|3QWY|A Chain A, Ced-2 Length = 308

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           +VVV  + F      DL  E+G   E++  T + WW+ ++  G+ G +P+NYV+
Sbjct: 148 EVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQ 201

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
           P  AG+S        KWE    +L L + LG G FG V   +  G          ++ V 
Sbjct: 14  PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
           M+K+    +D  D + E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
           P  AG+S        KWE    +L L + LG G FG V   +  G          ++ V 
Sbjct: 14  PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
           M+K+    +D  D + E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
           P  AG+S        KWE    +L L + LG G FG V   +  G          ++ V 
Sbjct: 14  PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
           M+K+    +D  D + E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
           P  AG+S        KWE    +L L + LG G FG V   +  G          ++ V 
Sbjct: 14  PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
           M+K+    +D  D + E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
           P  AG+S        KWE    +L L + LG G FG V   +  G          ++ V 
Sbjct: 14  PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
           M+K+    +D  D + E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYAS 124

>pdb|3QWX|X Chain X, Ced-2 1-174 Length = 174

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           +VVV  + F      DL  E+G   E++  T + WW+ ++  G+ G +P+NYV+
Sbjct: 119 EVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQ 172

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
           P  AG+S        KWE    +L L + LG G FG V   +  G          ++ V 
Sbjct: 14  PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
           M+K+    +D  D + E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYAS 124

>pdb|1A1A|A Chain A, C-Src (Sh2 Domain With C188a Mutation) Complexed With Ace-Formyl Phosphotyr-Glu-(N,N-Dipentyl Amine) Length = 107

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 253 KPKAWYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
           + + WY G ++R+ +E +L   E+  G F+VR S +TKG Y+LS+  +      +VKHY 
Sbjct: 5   QAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYSLSVSDFDNAKGLNVKHYK 64
Query: 309 IKQNSRGEFFLSEKHCCHSIPEV 331
           I++   G F+++ +   +S+ ++
Sbjct: 65  IRKLDSGGFYITSRTQFNSLQQL 87

>pdb|1A1A|A Chain A, C-Src (Sh2 Domain With C188a Mutation) Complexed With Ace-Formyl Phosphotyr-Glu-(N,N-Dipentyl Amine) Length = 107

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 331 VKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 387
            ++  G F+VR S +TKG Y+LS+  +      +VKHY I++   G F+++ +   +S+ 
Sbjct: 26  AENPRGTFLVRESETTKGAYSLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 85
Query: 388 EVVNYHRHNSGGLASRLKT 406
           ++V Y+  ++ GL  RL T
Sbjct: 86  QLVAYYSKHADGLCHRLTT 104

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVMTR 478
           D WEI   ++ + + +GSG FG V +GKW G + V M+     +      F  E  V+ +
Sbjct: 1   DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 479 LQHQNLVQLYGVCSKHRPIYIVT 501
            +H N++   G  +K + + IVT
Sbjct: 61  TRHVNILLFMGYSTKPQ-LAIVT 82

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVMTR 478
           D WEI   ++ + + +GSG FG V +GKW G + V M+     +      F  E  V+ +
Sbjct: 1   DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 479 LQHQNLVQLYGVCSKHRPIYIVT 501
            +H N++   G  +K + + IVT
Sbjct: 61  TRHVNILLFMGYSTKPQ-LAIVT 82

>pdb|2DLY|A Chain A, Solution Structure Of The Sh2 Domain Of Murine Fyn-Related Kinase Length = 121

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 320 SEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLS 378
           +EK   +S    +++ G F++R S S KG ++LS+   +    VKHY I++   G FFL+
Sbjct: 28  AEKQLLYS----ENQTGAFLIRESESQKGDFSLSV---LDEGVVKHYRIRRLDEGGFFLT 80
Query: 379 EKHCCHSIPEVVNYHRHNSGGLASRLKTSPC 409
            +    ++ E VNY+   S GL  +L+  PC
Sbjct: 81  RRKVFSTLNEFVNYYTTTSDGLCVKLE-KPC 110

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 19/112 (16%)
Query: 413 VPATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDV 456
            P  AG+S        KWE    +L L + LG G FG V   +  G          ++ V
Sbjct: 59  TPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAV 118
Query: 457 AMMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
            M+K+    +D  D + E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 119 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 170

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++  SDVWA+GV MWE+ T G+ PY  ++N E+ + +  G  L++P
Sbjct: 216 YTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQP 261

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   RF++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPE 251

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
           P  AG+S        KWE    +L L + LG G FG V   +  G          ++ V 
Sbjct: 1   PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK 60
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
           M+K+    +D  D + E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 61  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 111

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIE 471
           D+WE+   ++ LL ELG G FG+V  G  R  I         V  + E     +  +F+ 
Sbjct: 10  DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           EA VM      ++V+L GV SK +P  +V +
Sbjct: 70  EASVMKGFTCHHVVRLLGVVSKGQPTLVVME 100

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
           P  AG+S        KWE    +L L + LG G FG V   +  G          ++ V 
Sbjct: 3   PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK 62
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
           M+K+    +D  D + E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 63  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 113

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 19/112 (16%)
Query: 413 VPATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDV 456
            P  AG+S        KWE    +L L + LG G FG V   +  G          ++ V
Sbjct: 5   TPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAV 64
Query: 457 AMMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
            M+K+    +D  D + E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 65  KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 116

>pdb|4AFZ|C Chain C, Human Chymase - Fynomer Complex Length = 84

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY + A    DLS  KG ++++++     WW+ +    G  GYIPSNYV
Sbjct: 10  VALYDYNATRWTDLSFHKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYV 60

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIE 471
           D+WE+   ++ LL ELG G FG+V  G  R  I         V  + E     +  +F+ 
Sbjct: 11  DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 70
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           EA VM      ++V+L GV SK +P  +V +
Sbjct: 71  EASVMKGFTCHHVVRLLGVVSKGQPTLVVME 101

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIE 471
           D+WE+   ++ LL ELG G FG+V  G  R  I         V  + E     +  +F+ 
Sbjct: 10  DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           EA VM      ++V+L GV SK +P  +V +
Sbjct: 70  EASVMKGFTCHHVVRLLGVVSKGQPTLVVME 100

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVLMWE+FT G  PY  +   E+   ++ G  ++KP
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
           P  AG+S        KWE    +L L + LG G FG V   +  G          ++ V 
Sbjct: 14  PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
           M+K+    +D  D + E ++M  + +H+N++ L G C++  P+Y++   +S
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYAS 124

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVLMWE+FT G  PY  +   E+   ++ G  ++KP
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 281

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVA 457
           P  AG+S        KWE    +L L + LG G FG V   +  G          ++ V 
Sbjct: 14  PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
           M+K+    +D  D + E ++M  + +H+N++ L G C++  P+Y++   +S
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYAS 124

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIE 471
           D+WE+   ++ LL ELG G FG+V  G  R  I         V  + E     +  +F+ 
Sbjct: 10  DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           EA VM      ++V+L GV SK +P  +V +
Sbjct: 70  EASVMKGFTCHHVVRLLGVVSKGQPTLVVME 100

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIE 471
           D+WE+   ++ LL ELG G FG+V  G  R  I         V  + E     +  +F+ 
Sbjct: 10  DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           EA VM      ++V+L GV SK +P  +V +
Sbjct: 70  EASVMKGFTCHHVVRLLGVVSKGQPTLVVME 100

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIE 471
           D+WE+   ++ LL ELG G FG+V  G  R  I         V  + E     +  +F+ 
Sbjct: 10  DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           EA VM      ++V+L GV SK +P  +V +
Sbjct: 70  EASVMKGFTCHHVVRLLGVVSKGQPTLVVME 100

>pdb|1X2Q|A Chain A, Solution Structure Of The Sh3 Domain Of The Signal Transducing Adaptor Molecule 2 Length = 88

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
           V ALY F+A+E  +L+ + G    V+DD+  +WWK ++  G +G  PSN+V
Sbjct: 20  VRALYDFEAVEDNELTFKHGEIIIVLDDSDANWWKGENHRG-IGLFPSNFV 69

>pdb|1PRL|C Chain C, Two Binding Orientations For Peptides To Src Sh3 Domain: Development Of A General Model For Sh3-Ligand Interactions Length = 64

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY +++    DLS +KG   +++++T+  WW       G  GYIPSNYV
Sbjct: 11  VALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLTTGQTGYIPSNYV 61

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIE 471
           D+WE+   ++ LL ELG G FG+V  G  R  I         V  + E     +  +F+ 
Sbjct: 7   DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 66
Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           EA VM      ++V+L GV SK +P  +V +
Sbjct: 67  EASVMKGFTCHHVVRLLGVVSKGQPTLVVME 97

>pdb|1BKL|A Chain A, Self-Associated Apo Src Sh2 Domain Length = 113

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 257 WYVGDMSRQRAES-ILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
           WY G ++R+ +ES +L  E+  G F+VR S +TKG Y LS+  +      +VKHY I++ 
Sbjct: 6   WYFGKITRRESESLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 65
Query: 313 SRGEFFLSEK 322
             G F+++ +
Sbjct: 66  DSGGFYITSR 75

>pdb|1BKL|A Chain A, Self-Associated Apo Src Sh2 Domain Length = 113

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +    S+ +
Sbjct: 24  ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 83
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
           +V Y+  ++ GL  RL T+ C
Sbjct: 84  LVAYYSKHADGLCHRL-TNVC 103

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DFIEE 472
           KWE     L   + LGSG FG V      G      SI VA  M+KE   S +    + E
Sbjct: 39  KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSE 98
Query: 473 AKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
            K+MT+L  H+N+V L G C+   PIY++ +
Sbjct: 99  LKMMTQLGSHENIVNLLGACTLSGPIYLIFE 129

>pdb|4HCK|A Chain A, Human Hck Sh3 Domain, Nmr, 25 Structures Length = 72

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           +VVALY ++AI   DLS +KG +  V++++ E WWK +       GYIPSNYV
Sbjct: 11  IVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYV 62

>pdb|1BU1|A Chain A, Src Family Kinase Hck Sh3 Domain Length = 57

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           +VVALY ++AI   DLS +KG +  V++++ E WWK +       GYIPSNYV
Sbjct: 2   IVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYV 53

>pdb|1OV3|A Chain A, Structure Of The P22phox-P47phox Complex Length = 138

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 77  ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNG---------IRKPDQMIRP 125
           A+  ++   G +++L  G   EV++ ++  WW  ++K K G         +  PD+   P
Sbjct: 16  AIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDP 75
Query: 126 KV------VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           +        VA+  + A+EG ++SL +G   EV+    + WW ++ K+   GY PS Y++
Sbjct: 76  EPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR-KDDVTGYFPSMYLQ 134

>pdb|1O4C|A Chain A, Crystal Structure Of Sh2 In Complex With Phosphate. Length = 108

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 253 KPKAWYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
           + + WY G ++R+ +E +L   E+  G F+VR S +TKG Y LS+  +      +VKHY 
Sbjct: 3   QAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYXLSVSDFDNAKGLNVKHYK 62
Query: 309 IKQNSRGEFFLSEKHCCHSIPEV 331
           I++   G F+++ +   +S+ ++
Sbjct: 63  IRKLDSGGFYITSRTQFNSLQQL 85

>pdb|1O4C|A Chain A, Crystal Structure Of Sh2 In Complex With Phosphate. Length = 108

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +   +S+ +
Sbjct: 25  ENPRGTFLVRESETTKGAYXLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQ 84
Query: 389 VVNYHRHNSGGLASRLKT 406
           +V Y+  ++ GL  RL T
Sbjct: 85  LVAYYSKHADGLCHRLTT 102

>pdb|1SHD|A Chain A, Peptide Inhibitors Of Src Sh3-Sh2-Phosphoprotein Interactions Length = 107

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 253 KPKAWYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
           + + WY G ++R+ +E +L   E+  G F+VR S +TKG Y LS+  +      +VKHY 
Sbjct: 5   QAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYK 64
Query: 309 IKQNSRGEFFLSEKHCCHSIPEV 331
           I++   G F+++ +   +S+ ++
Sbjct: 65  IRKLDSGGFYITSRTQFNSLQQL 87

>pdb|1SHD|A Chain A, Peptide Inhibitors Of Src Sh3-Sh2-Phosphoprotein Interactions Length = 107

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 331 VKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 387
            ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +   +S+ 
Sbjct: 26  AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 85
Query: 388 EVVNYHRHNSGGLASRLKT 406
           ++V Y+  ++ GL  RL T
Sbjct: 86  QLVAYYSKHADGLCHRLTT 104

>pdb|4HXJ|A Chain A, Crystal Structure Of Sh3:rgt Complex Length = 60

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY +++    DLS +KG   +++++T+  WW       G  GYIPSNYV
Sbjct: 6   VALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYV 56

>pdb|2OI3|A Chain A, Nmr Structure Analysis Of The Hematopoetic Cell Kinase Sh3 Domain Complexed With An Artificial High Affinity Ligand (Pd1) Length = 86

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKELL 184
           +VVALY ++AI   DLS +KG +  V++++ E WWK +       GYIPSNYV   + L
Sbjct: 27  IVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYVARVDSL 84

>pdb|1O41|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78300. Length = 108

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 253 KPKAWYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
           + + WY G ++R+ +E +L   E+  G F+VR S +TKG Y LS+  +      +VKHY 
Sbjct: 3   QAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYK 62
Query: 309 IKQNSRGEFFLSEKHCCHSIPEV 331
           I++   G F+++ +   +S+ ++
Sbjct: 63  IRKLDSGGFYITSRTQFNSLQQL 85

>pdb|1O41|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78300. Length = 108

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +   +S+ +
Sbjct: 25  ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQ 84
Query: 389 VVNYHRHNSGGLASRLKT 406
           +V Y+  ++ GL  RL T
Sbjct: 85  LVAYYSKHADGLCHRLTT 102

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFI--------EEAKVM 476
           EID AEL L E +G G FG V R  W G  D   +K      D+ I        +EAK+ 
Sbjct: 3   EIDFAELTLEEIIGIGGFGKVYRAFWIG--DEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
             L+H N++ L GVC K   + +V +
Sbjct: 61  AMLKHPNIIALRGVCLKEPNLCLVME 86

>pdb|3HCK|A Chain A, Nmr Ensemble Of The Uncomplexed Human Hck Sh2 Domain, 20 Structures Length = 107

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 336 GCFVVRNS-STKGLYTLSLYTKVPH--PHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
           G F++R+S +TKG Y+LS+    P     VKHY I+    G F++S +    ++ E+V++
Sbjct: 28  GSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDH 87
Query: 393 HRHNSGGLASRLKTSPC 409
           ++  + GL  +L   PC
Sbjct: 88  YKKGNDGLCQKLSV-PC 103

>pdb|4AFQ|C Chain C, Human Chymase - Fynomer Complex Length = 85

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQE-HWWKVKD-KNGSVGYIPSNYV 178
           VALY ++A    DLS  KG +++++D +    WW+ +    G  GYIPSNYV
Sbjct: 10  VALYDYQADRWTDLSFHKGEKFQILDASPPGDWWEARSLTTGETGYIPSNYV 61

>pdb|1QWE|A Chain A, C-Src Sh3 Domain Complexed With Ligand App12 Length = 64

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY +++    DLS +KG   +++++T+  WW       G  GYIPSNYV
Sbjct: 11  VALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLTTGQTGYIPSNYV 61

>pdb|4F59|A Chain A, Triple Mutant Src Sh2 Domain Length = 112

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 253 KPKAWYVGDMSRQRAESIL-KQEDKEGCFVVRNSST-KGLYTLSL--YTKVPHPHVKHYH 308
           + + WY G ++R+ +E +L   E+  G F+VR S T KG Y LS+  +      +VKHY 
Sbjct: 7   QAEEWYFGKITRRESERLLLNAENPRGTFLVRESETVKGAYALSVSDFDNAKGLNVKHYL 66
Query: 309 IKQNSRGEFFLSEKHCCHSIPEV 331
           I++   G F+++ +   +S+ ++
Sbjct: 67  IRKLDSGGFYITSRTQFNSLQQL 89

>pdb|4F59|A Chain A, Triple Mutant Src Sh2 Domain Length = 112

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 331 VKDKEGCFVVRNSST-KGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 387
            ++  G F+VR S T KG Y LS+  +      +VKHY I++   G F+++ +   +S+ 
Sbjct: 28  AENPRGTFLVRESETVKGAYALSVSDFDNAKGLNVKHYLIRKLDSGGFYITSRTQFNSLQ 87
Query: 388 EVVNYHRHNSGGLASRLKT 406
           ++V Y+  ++ GL  RL T
Sbjct: 88  QLVAYYSKHADGLCHRLTT 106

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 98  MPFGXLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 142

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 123 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 167

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 221 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 266

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 99  MPFGXLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 143

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 242

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 98  MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 142

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
           +WE+    L+L + LG G FG V   +  G           + V M+K     +D  D I
Sbjct: 63  RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 122
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
            E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 123 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 158

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
           +WE+    L+L + LG G FG V   +  G           + V M+K     +D  D I
Sbjct: 15  RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 74
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
            E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 75  SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 110

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 102 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 146

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 245

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 98  MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 142

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241

>pdb|1BKM|A Chain A, Cocrystal Structure Of D-Amino Acid Substituted Phosphopeptide Complex Length = 113

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
           WY G ++R+ +E++L   E+  G F+VR S +TKG Y LS+  +      +VKHY I++ 
Sbjct: 6   WYFGKITRRESEALLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 65
Query: 313 SRGEFFLSEK 322
             G F+++ +
Sbjct: 66  DSGGFYITSR 75

>pdb|1BKM|A Chain A, Cocrystal Structure Of D-Amino Acid Substituted Phosphopeptide Complex Length = 113

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +    S+ +
Sbjct: 24  ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 83
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
           +V Y+  ++ GL  RL T+ C
Sbjct: 84  LVAYYSKHADGLCHRL-TNVC 103

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 108 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 152

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 206 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 251

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
           +WE+    L+L + LG G FG V   +  G           + V M+K     +D  D I
Sbjct: 11  RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 70
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
            E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 71  SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 106

>pdb|3FJ5|A Chain A, Crystal Structure Of The C-Src-Sh3 Domain Length = 57

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           VALY +++    DLS +KG   +++++T+  WW       G  GYIPSNYV
Sbjct: 4   VALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLTTGRTGYIPSNYV 54

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 92  MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 136

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 190 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 235

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
           +WE+    L+L + LG G FG V   +  G           + V M+K     +D  D I
Sbjct: 7   RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 66
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
            E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 67  SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 102

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
           +WE+    L+L + LG G FG V   +  G           + V M+K     +D  D I
Sbjct: 22  RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 81
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
            E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 82  SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 99  MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 143

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 242

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 100 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 144

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 243

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 100 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 144

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 243

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 98  MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 142

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 100 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 144

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 243

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 100 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 144

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 243

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 105 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 149

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 248

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 101 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 145

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 244

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 104 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 148

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 202 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 247

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 98  MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 142

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 101 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 145

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 244

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
           +WE+    L+L + LG G FG V   +  G           + V M+K     +D  D I
Sbjct: 14  RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 73
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
            E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 74  SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 109

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 100 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 144

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 243

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVMTR 478
           D WEI   ++ + + +GSG FG V +GKW G + V M+     +      F  E  V+ +
Sbjct: 1   DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 479 LQHQNLVQLYGVCSKHRPIYIVT 501
            +H N++   G  +  + + IVT
Sbjct: 61  TRHVNILLFMGYSTAPQ-LAIVT 82

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
           +WE+    L+L + LG G FG V   +  G           + V M+K     +D  D I
Sbjct: 22  RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 81
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
            E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 82  SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 101 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 145

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 244

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 105 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 149

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 248

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 102 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 146

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 245

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 105 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 149

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 248

>pdb|2L2P|A Chain A, Folding Intermediate Of The Fyn Sh3 A39vN53PV55L FROM NMR RELAXATION Dispersion Experiments Length = 66

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           ALY ++A    DLS  KG ++++++ ++  WW+V+    G  GYIPS Y+
Sbjct: 12  ALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEVRSLTTGETGYIPSPYL 61

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 98  MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 142

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
           +WE+    L+L + LG G FG V   +  G           + V M+K     +D  D I
Sbjct: 22  RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 81
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
            E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 82  SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 132 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 176

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 230 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 275

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 105 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 149

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 248

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR+
Sbjct: 101 MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMNYLEDRRLVHRD 145

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 244

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+FT G  PY  +   E+   ++ G  ++KP
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP 274

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG----------SIDVAMMKEGTMSED--DFI 470
           +WE+    L+L + LG G FG V   +  G           + V M+K     +D  D I
Sbjct: 22  RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 81
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSS 505
            E ++M  + +H+N++ L G C++  P+Y++ + +S
Sbjct: 82  SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117

>pdb|1LCK|A Chain A, Sh3-Sh2 Domain Fragment Of Human P56-Lck Tyrosine Kinase Complexed With The 10 Residue Synthetic Phosphotyrosyl Peptide Tegqpyqpqpa Length = 175

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 115 GIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYI 173
           G   P   ++  +V+AL+ ++    GDL  EKG +  +++ + E WWK +    G  G+I
Sbjct: 2   GSNPPASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFI 60
Query: 174 PSNYVKEKELL 184
           P N+V +   L
Sbjct: 61  PFNFVAKANSL 71

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVM 476
           + D WEI   ++ + + +GSG FG V +GKW G + V M+     +      F  E  V+
Sbjct: 15  AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
            + +H N++   G  +  + + IVT
Sbjct: 75  RKTRHVNILLFMGYSTAPQ-LAIVT 98

>pdb|4D8K|A Chain A, Crystal Structure Of A Sh3-Sh2 Domains Of A Lymphocyte-Specific Protein Tyrosine Kinase (Lck) From Homo Sapiens At 2.36 A Resolution Length = 175

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 115 GIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYI 173
           G   P   ++  +V+AL+ ++    GDL  EKG +  +++ + E WWK +    G  G+I
Sbjct: 2   GSNPPASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFI 60
Query: 174 PSNYVKEKELL 184
           P N+V +   L
Sbjct: 61  PFNFVAKANSL 71

>pdb|1UJ0|A Chain A, Crystal Structure Of Stam2 Sh3 Domain In Complex With A Ubpy-Derived Peptide Length = 62

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
           V ALY F+A+E  +L+ + G    V+DD+  +WW+ ++  G+ G  PSN+V
Sbjct: 8   VRALYDFEAVEDNELTFKHGELITVLDDSDANWWQGENHRGT-GLFPSNFV 57

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDD--FI 470
           ++KWE     L   + LG+G FG V      G         + V M+K    +++    +
Sbjct: 38  NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
            E K+M+ L QH+N+V L G C+   P+ ++T+
Sbjct: 98  SELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDD--FI 470
           ++KWE     L   + LG+G FG V      G         + V M+K    +++    +
Sbjct: 38  NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
            E K+M+ L QH+N+V L G C+   P+ ++T+
Sbjct: 98  SELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDD--FI 470
           ++KWE     L   + LG+G FG V      G         + V M+K    +++    +
Sbjct: 38  NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
            E K+M+ L QH+N+V L G C+   P+ ++T+
Sbjct: 98  SELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           F++ SD+W++GV++WE+ +  + PY  L N +V+  V  G  L++P
Sbjct: 208 FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 253

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 319

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 265

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDD--FI 470
           ++KWE     L   + LG+G FG V      G         + V M+K    +++    +
Sbjct: 23  NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 82
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
            E K+M+ L QH+N+V L G C+   P+ ++T+
Sbjct: 83  SELKIMSHLGQHENIVNLLGACTHGGPVLVITE 115

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDD--FI 470
           ++KWE     L   + LG+G FG V      G         + V M+K    +++    +
Sbjct: 30  NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 89
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
            E K+M+ L QH+N+V L G C+   P+ ++T+
Sbjct: 90  SELKIMSHLGQHENIVNLLGACTHGGPVLVITE 122

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 261

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 261

>pdb|2D8J|A Chain A, Solution Structure Of The Sh3 Domain Of Fyn-Related Kinase Length = 77

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGS------VGYIPSNYVKE 180
           VAL+ ++A    DLS   G + +V+D + E WW  +  +K G+       GYIPSNYV E
Sbjct: 11  VALFDYQARTAEDLSFRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNYVAE 70

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 259

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 255

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 279

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDD--FI 470
           ++KWE     L   + LG+G FG V      G         + V M+K    +++    +
Sbjct: 38  NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSSF 506
            E K+M+ L QH+N+V L G C+   P+ ++T+   +
Sbjct: 98  SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 259

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 278

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 257

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 260

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 258

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 258

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 260

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 260

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 260

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 252

>pdb|1SKJ|A Chain A, Cocrystal Structure Of Urea-Substituted Phosphopeptide Complex Length = 113

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
           WY G ++R+ +E +L   E+  G F+VR S +TKG Y LS+  +      +VKHY I++ 
Sbjct: 6   WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 65
Query: 313 SRGEFFLSEKHCCHSIPEV 331
             G F+++ +    S+ ++
Sbjct: 66  DSGGFYITSRTQFSSLQQL 84

>pdb|1SKJ|A Chain A, Cocrystal Structure Of Urea-Substituted Phosphopeptide Complex Length = 113

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +    S+ +
Sbjct: 24  ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 83
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
           +V Y+  ++ GL  RL T+ C
Sbjct: 84  LVAYYSKHADGLCHRL-TNVC 103

>pdb|1SHA|A Chain A, Crystal Structure Of The Phosphotyrosine Recognition Domain Sh2 Of V-Src Complexed With Tyrosine-Phosphorylated Peptides Length = 104

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 253 KPKAWYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
           + + WY G ++R+ +E +L   E+  G F+VR S +TKG Y LS+  +      +VKHY 
Sbjct: 1   QAEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYK 60
Query: 309 IKQNSRGEFFLSEK 322
           I++   G F+++ +
Sbjct: 61  IRKLDSGGFYITSR 74

>pdb|1SHA|A Chain A, Crystal Structure Of The Phosphotyrosine Recognition Domain Sh2 Of V-Src Complexed With Tyrosine-Phosphorylated Peptides Length = 104

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +    S+ +
Sbjct: 23  ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 82
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
           +V Y+  ++ GL  RL T+ C
Sbjct: 83  LVAYYSKHADGLCHRL-TNVC 102

>pdb|1P13|A Chain A, Crystal Structure Of The Src Sh2 Domain Complexed With Peptide (Sdpyanfk) Length = 102

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
           WY G ++R+ +E +L   E+  G F+VR S +TKG Y LS+  +      +VKHY I++ 
Sbjct: 4   WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 63
Query: 313 SRGEFFLSEK 322
             G F+++ +
Sbjct: 64  DSGGFYITSR 73

>pdb|1P13|A Chain A, Crystal Structure Of The Src Sh2 Domain Complexed With Peptide (Sdpyanfk) Length = 102

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +    S+ +
Sbjct: 22  ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 81
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
           +V Y+  ++ GL  RL T+ C
Sbjct: 82  LVAYYSKHADGLCHRL-TNVC 101

>pdb|1WXB|A Chain A, Solution Structure Of The Sh3 Domain From Human Epidermal Growth Factor Receptor Pathway Substrate 8-Like Protein Length = 68

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           K V  LY F A    +LS+ K    EV++D ++ WWK++ ++G  GY+P N + E
Sbjct: 8   KYVKILYDFTARNANELSVLKDEVLEVLEDGRQ-WWKLRSRSGQAGYVPCNILGE 61

>pdb|1IS0|A Chain A, Crystal Structure Of A Complex Of The Src Sh2 Domain With Conformationally Constrained Peptide Inhibitor Length = 106

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 253 KPKAWYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYH 308
           + + WY G ++R+ +E +L   E+  G F+VR S +TKG Y LS+  +      +VKHY 
Sbjct: 1   QAEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYK 60
Query: 309 IKQNSRGEFFLSEK 322
           I++   G F+++ +
Sbjct: 61  IRKLDSGGFYITSR 74

>pdb|1IS0|A Chain A, Crystal Structure Of A Complex Of The Src Sh2 Domain With Conformationally Constrained Peptide Inhibitor Length = 106

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +    S+ +
Sbjct: 23  ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 82
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
           +V Y+  ++ GL  RL T+ C
Sbjct: 83  LVAYYSKHADGLCHRL-TNVC 102

>pdb|1NZL|A Chain A, Crystal Structure Of Src Sh2 Domain Bound To Doubly Phosphorylated Peptide Pqpyepyipi Length = 103

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
           WY G ++R+ +E +L   E+  G F+VR S +TKG Y LS+  +      +VKHY I++ 
Sbjct: 4   WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 63
Query: 313 SRGEFFLSEK 322
             G F+++ +
Sbjct: 64  DSGGFYITSR 73

>pdb|1NZL|A Chain A, Crystal Structure Of Src Sh2 Domain Bound To Doubly Phosphorylated Peptide Pqpyepyipi Length = 103

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G F+++ +    S+ +
Sbjct: 22  ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQ 81
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
           +V Y+  ++ GL  RL T+ C
Sbjct: 82  LVAYYSKHADGLCHRL-TNVC 101

>pdb|1KC2|A Chain A, Structure Of The Triple (Lys(Beta)d3ala, Asp(Beta)c8ala, Aspcd2ala) Mutant Of The Src Sh2 Domain Bound To The Pqpyeeipi Peptide Length = 103

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 257 WYVGDMSRQRAES-ILKQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
           WY G ++R+ +E  +L  E+  G F+VR S +TKG Y LS+  +      +V HY I++ 
Sbjct: 4   WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSAFANAKGLNVAHYKIRKL 63
Query: 313 SRGEFFLSEK 322
             G F+++ +
Sbjct: 64  DSGGFYITSR 73

>pdb|1KC2|A Chain A, Structure Of The Triple (Lys(Beta)d3ala, Asp(Beta)c8ala, Aspcd2ala) Mutant Of The Src Sh2 Domain Bound To The Pqpyeeipi Peptide Length = 103

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 332 KDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           ++  G F+VR S +TKG Y LS+  +      +V HY I++   G F+++ +    S+ +
Sbjct: 22  ENPRGTFLVRESETTKGAYCLSVSAFANAKGLNVAHYKIRKLDSGGFYITSRTQFSSLQQ 81
Query: 389 VVNYHRHNSGGLASRLKTSPC 409
           +V Y+  ++ GL  RL T+ C
Sbjct: 82  LVAYYSKHADGLCHRL-TNVC 101

>pdb|2L0A|A Chain A, Solution Nmr Structure Of Signal Transducing Adapter Molecule 1 Stam-1 From Homo Sapiens, Northeast Structural Genomics Consortium Target Hr4479e Length = 72

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
           V A+Y F+A E  +L+ + G    V+DD+  +WWK +   G +G  PSN+V
Sbjct: 20  VRAIYDFEAAEDNELTFKAGEIITVLDDSDPNWWKGETHQG-IGLFPSNFV 69

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 279 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 325

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 229 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 275

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 277 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 323

>pdb|2K2M|A Chain A, Structural Basis Of Pxxdy Motif Recognition In Sh3 Binding Length = 68

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
           K V+  Y F+A    +LS+++    EV+DD+++ WWKV+D  G  GY+P N
Sbjct: 9   KWVLCNYDFQARNSSELSVKQRDVLEVLDDSRK-WWKVRDPAGQEGYVPYN 58

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAP 269

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 270 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 316

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 272 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 318

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 269

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 264 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 310

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLK-NTEVVDRVQRGIILEKP 254
           ++ +SDVW++GVL+WE+F+ G  PY  +K + E   R++ G  +  P
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRE 47
           M  G LL+Y+R H++ +G     LL+ C+Q+ +GM YLE    +HR+
Sbjct: 95  MPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAEGMNYLEDRRLVHRD 139

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 193 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 238

>pdb|2JXB|A Chain A, Structure Of Cd3epsilon-Nck2 First Sh3 Domain Complex Length = 86

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
           +V+A + + A +  +L ++K     ++DD++  WW+V++     GY+PSNYV+ K
Sbjct: 33  IVIAKWDYTAQQDQELDIKKNERLWLLDDSKT-WWRVRNAANRTGYVPSNYVERK 86

>pdb|2LQN|A Chain A, Solution Structure Of Crkl Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V  LY F   +  DL  +KG    +++  +E WW  ++K+G VG IP  YV++
Sbjct: 128 VRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEK 180

>pdb|2LQW|A Chain A, Solution Structure Of Phosphorylated Crkl Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V  LY F   +  DL  +KG    +++  +E WW  ++K+G VG IP  YV++
Sbjct: 128 VRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEK 180

>pdb|2JW4|A Chain A, Nmr Solution Structure Of The N-Terminal Sh3 Domain Of Human Nckalpha Length = 72

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 122 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
           M    VVVA + + A +  +L ++K     ++DD++  WW+V++     G++PSNYV+ K
Sbjct: 4   MAEEVVVVAKFDYVAQQEQELDIKKNERLWLLDDSKS-WWRVRNSMNKTGFVPSNYVERK 62

>pdb|2B86|A Chain A, Solution Structure Of The First Src Homology 3 Domain Of Nck2 Length = 67

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 122 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
           M    +V+A + + A +  +L ++K     ++DD++  WW+V++     GY+PSNYV+ K
Sbjct: 1   MTEEVIVIAKWDYTAQQDQELDIKKNERLWLLDDSKT-WWRVRNAANRTGYVPSNYVERK 59

>pdb|3CQT|A Chain A, N53i V55l Mutant Of Fyn Sh3 Domain Length = 79

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           ALY ++A    DLS  KG ++++++ ++  WW+ +    G  GYIPS Y+
Sbjct: 10  ALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSIYL 59

>pdb|1F1W|A Chain A, Src Sh2 Thref1trp Mutant Complexed With The Phosphopeptide S(Ptr)vnvqn Length = 104

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQN 312
           WY G ++R+ +E +L   E+  G F+VR S +TKG Y LS+  +      +VKHY I++ 
Sbjct: 5   WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 64
Query: 313 SRGEFFL 319
             G F++
Sbjct: 65  DSGGFYI 71

>pdb|1GRI|A Chain A, Grb2 Length = 217

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 245 VQRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPH 303
           + +  I  KP  W+ G + R +AE +L ++  +G F++R S S  G ++LS+        
Sbjct: 48  IPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---ND 104
Query: 304 VKHYHIKQNSRGEFFL 319
           V+H+ + ++  G++FL
Sbjct: 105 VQHFKVLRDGAGKYFL 120

>pdb|2JS2|A Chain A, Solution Structure Of First Sh3 Domain Of Adaptor Nck Length = 63

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 122 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
           M    VVVA + + A +  +L ++K     ++DD++  WW+V++     G++PSNYV+ K
Sbjct: 3   MAEEVVVVAKFDYVAQQEQELDIKKNERLWLLDDSK-SWWRVRNSMNKTGFVPSNYVERK 61

>pdb|1X27|A Chain A, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of P130cas Length = 167

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKELL 184
            +V+AL+ ++    GDL  EKG +  +++ + E WWK +    G  G+IP N+V +   L
Sbjct: 5   NLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFIPFNFVAKANSL 63

>pdb|3REB|B Chain B, Hiv-1 Nef Protein In Complex With Engineered Hck-Sh3 Domain Length = 90

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           +VVALY + +    DLS +KG +  V++++ E WWK +       GYIPSNYV
Sbjct: 5   IVVALYDYVSWSPDDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYV 56

>pdb|1BMB|A Chain A, Grb2-Sh2 Domain In Complex With KpfyVnvef (Pkf270-974) Length = 123

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
           KP  W+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+ + +
Sbjct: 11  KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 67
Query: 312 NSRGEFFL 319
           +  G++FL
Sbjct: 68  DGAGKYFL 75

>pdb|3N84|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A 23-Membered Macrocyclic Ligand Having The Sequence Pyvnvp Length = 112

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 249 IILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHY 307
           +I  KP  W+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+
Sbjct: 1   MIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHF 57
Query: 308 HIKQNSRGEFFL 319
            + ++  G++FL
Sbjct: 58  KVLRDGAGKYFL 69

>pdb|1FHS|A Chain A, The Three-Dimensional Solution Structure Of The Src Homology Domain-2 Of The Growth Factor Receptor Bound Protein-2, Nmr, 18 Structures Length = 112

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
           KP  W+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+ + +
Sbjct: 5   KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 61
Query: 312 NSRGEFFL 319
           +  G++FL
Sbjct: 62  DGAGKYFL 69

>pdb|3RBB|B Chain B, Hiv-1 Nef Protein In Complex With Engineered Hck Sh3 Domain Length = 61

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYV 178
           +VVALY + +    DLS +KG +  V++++ E WWK +       GYIPSNYV
Sbjct: 5   IVVALYDYYSPFSWDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYV 56

>pdb|2VWF|A Chain A, Grb2 Sh3c (2) Length = 58

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
           P  V AL+ F   E G+L   +G    VMD++  +WWK    +G  G  P NYV
Sbjct: 2   PTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWK-GACHGQTGMFPRNYV 54

>pdb|3OVE|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A Pyxn- Derived Tripeptide Length = 117

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
           KP  W+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+ + +
Sbjct: 4   KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 60
Query: 312 NSRGEFFL 319
           +  G++FL
Sbjct: 61  DGAGKYFL 68

>pdb|3IMD|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A Flexible Ac-Py-Q-N-Nh2 Tripeptide Mimic Length = 117

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
           KP  W+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+ + +
Sbjct: 4   KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 60
Query: 312 NSRGEFFL 319
           +  G++FL
Sbjct: 61  DGAGKYFL 68

>pdb|1UHF|A Chain A, Solution Structure Of The Third Sh3 Domain Of Human Intersectin 2(Kiaa1256) Length = 69

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW--KVKDKNGSVGYIPSNYVKEKE 182
           +ALYP+ ++E GDL+  +G E  V     E WW   + D++   G  PSNYVK K+
Sbjct: 12  IALYPYSSVEPGDLTFTEGEEILVTQKDGE-WWTGSIGDRS---GIFPSNYVKPKD 63

>pdb|3GF9|A Chain A, Crystal Structure Of Human Intersectin 2 Rhogef Domain Length = 295

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           V+A+Y + A    +LS  KG    VM+     WW+  + NG  G  PSNYVK
Sbjct: 21  VIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQ-GEINGVTGLFPSNYVK 71

>pdb|2AOA|A Chain A, Crystal Structures Of A High-affinity Macrocyclic Peptide Mimetic In Complex With The Grb2 Sh2 Domain Length = 99

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
           KP  W+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+ + +
Sbjct: 2   KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 58
Query: 312 NSRGEFFL 319
           +  G++FL
Sbjct: 59  DGAGKYFL 66

>pdb|2D8H|A Chain A, Solution Structure Of The Sh3 Domain Of Hypothetical Protein Sh3yl1 Length = 80

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 114 NGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWKVKDKNGSVG 171
           +G  +   + +P  V ALY F+  + GDL+ + G    V+  T  H  WW+ K + G  G
Sbjct: 6   SGHERVGNLNQPIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLR-GQTG 64
Query: 172 YIPSNYV 178
             P+NYV
Sbjct: 65  IFPANYV 71

>pdb|1ZFP|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain Complexed With A Phosphotyrosyl Pentapeptide Length = 98

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
           KP  W+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+ + +
Sbjct: 1   KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 57
Query: 312 NSRGEFFL 319
           +  G++FL
Sbjct: 58  DGAGKYFL 65

>pdb|1TZE|E Chain E, Signal Transduction Adaptor Growth Factor, Grb2 Sh2 Domain Complexed With Phosphotyrosyl Heptapeptide Lys-Pro-Phe-Ptyr-Val-Asn-Val-Nh2 (Kfppyvnc-Nh2) Length = 98

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
           KP  W+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+ + +
Sbjct: 2   KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 58
Query: 312 NSRGEFFL 319
           +  G++FL
Sbjct: 59  DGAGKYFL 66

>pdb|3MXC|A Chain A, Structures Of Grb2-Sh2 Domain And Aicd Peptide Complexes Reveal A Conformational Switch And Their Functional Implications. Length = 101

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
           KP  W+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+ + +
Sbjct: 5   KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 61
Query: 312 NSRGEFFL 319
           +  G++FL
Sbjct: 62  DGAGKYFL 69

>pdb|2H46|E Chain E, Native Domain-Swapped Dimer Crystal Structure Of The Grb2 Sh2 Domain Length = 116

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
           KP  W+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+ + +
Sbjct: 4   KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 60
Query: 312 NSRGEFFL 319
           +  G++FL
Sbjct: 61  DGAGKYFL 68

>pdb|2DL4|A Chain A, Solution Structure Of The First Sh3 Domain Of Stac Protein Length = 68

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           VALY F   E  DL +  G    +++D+ E WWK K ++  +G+ P+N+V+
Sbjct: 11  VALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQD-RIGFFPANFVQ 60

>pdb|1BM2|A Chain A, Grb2-Sh2 Domain In Complex With Cyclo-[n-Alpha-Acetyl-L-Thi Alysyl-O-Phosphotyrosyl-Valyl-Asparagyl-Valyl-Prolyl] (Pkf273-791) Length = 117

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
           KP  W+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+ + +
Sbjct: 10  KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGN---DVQHFKVLR 66
Query: 312 NSRGEFFL 319
           +  G++FL
Sbjct: 67  DGAGKYFL 74

>pdb|1FYR|A Chain A, Dimer Formation Through Domain Swapping In The Crystal Structure Of The Grb2-Sh2 Ac-Pyvnv Complex Length = 114

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
           KP  W+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+ + +
Sbjct: 9   KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLR 65
Query: 312 NSRGEFFL 319
           +  G++FL
Sbjct: 66  DGAGKYFL 73

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWY-VGDMSRQR 266
           ++  K DVW+ GV+++ +  CG  P+G   + E++ RV++G     P  W  V D ++Q 
Sbjct: 198 KYDEKCDVWSCGVILY-ILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQL 256
Query: 267 AESILKQE 274
            + +L  E
Sbjct: 257 VKLMLTYE 264

>pdb|1H92|A Chain A, Sh3 Domain Of Human Lck Tyrosine Kinase Length = 63

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 123 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKE 180
           ++  +V+AL+ ++    GDL  EKG +  +++ + E WWK +    G  G+IP N+V +
Sbjct: 4   LQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFIPFNFVAK 61

>pdb|2A08|A Chain A, Structure Of The Yeast Yhh6 Sh3 Domain Length = 60

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 129 VALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWKVKDKNGSVGYIPSNYVK 179
           VALY F   + GDL+ +KG    ++   D+Q  WW  +  NG  G  P+NYV+
Sbjct: 7   VALYNFAGEQPGDLAFKKGDVITILKKSDSQNDWWTGR-TNGKEGIFPANYVR 58

>pdb|2IIM|A Chain A, Sh3 Domain Of Human Lck Length = 62

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 123 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKE 180
           ++  +V+AL+ ++    GDL  EKG +  +++ + E WWK +    G  G+IP N+V +
Sbjct: 4   LQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFIPFNFVAK 61

>pdb|1UDL|A Chain A, The Solution Structure Of The Fifth Sh3 Domain Of Intersectin 2 (Kiaa1256) Length = 98

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           V+A+Y + A    +LS  KG    VM+     WW+  + NG  G  PSNYVK
Sbjct: 37  VIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQ-GEINGVTGLFPSNYVK 87

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW-YVGDMSRQR 266
           ++  K DVW+ GV+++ +  CG  P+G   + E++ RV++G     P  W  V D ++Q 
Sbjct: 181 KYDEKCDVWSCGVILY-ILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQL 239
Query: 267 AESILKQE 274
            + +L  E
Sbjct: 240 VKLMLTYE 247

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVMTRL 479
           +W+I   +L + E +G G+FG V  G+W G + + ++     +ED    F  E     + 
Sbjct: 27  EWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQT 86
Query: 480 QHQNLVQLYGVCSKHRPIYIVT 501
           +H+N+V   G C     + I+T
Sbjct: 87  RHENVVLFMGACMSPPHLAIIT 108

>pdb|2L3S|A Chain A, Structure Of The Autoinhibited Crk Length = 163

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V AL+ F   +  DL  +KG   ++ D  +E WW  +D +G  G IP  YV++
Sbjct: 4   VRALFDFNGNDDEDLPFKKGDILKIRDKPEEQWWNAEDMDGKRGMIPVPYVEK 56

>pdb|1OOT|A Chain A, Crystal Structure Of The Sh3 Domain From A S. Cerevisiae Hypothetical 40.4 Kda Protein At 1.39 A Resolution Length = 60

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWKVKDKNGSVGYIPSNYVK 179
           PK V ALY F   E GDL   KG    ++   D+Q  WW  +  NG  G  P+NYV+
Sbjct: 4   PKAV-ALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGR-VNGREGIFPANYVE 58

>pdb|2ROL|A Chain A, Structural Basis Of Pxxdy Motif Recognition In Sh3 Binding Length = 64

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
           K V+  Y F+A    +LS+++    EV+DD+++ WWKV+D  G  GY+P N
Sbjct: 8   KWVLCNYDFQARNSSELSVKQRDVLEVLDDSRK-WWKVRDPAGQEGYVPYN 57

>pdb|1KIK|A Chain A, Sh3 Domain Of Lymphocyte Specific Kinase (Lck) Length = 57

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKE 180
           +V+AL+ ++    GDL  EKG +  +++ + E WWK +    G  G+IP N+V +
Sbjct: 2   LVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFIPFNFVAK 55

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	513
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	5e-65
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-17
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-14
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	7e-14
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-63
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-17
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-13
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-62
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-18
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-17
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-13
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-09
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-60
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-19
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-14
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-13
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-60
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-20
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-14
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-57
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	6e-19
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-16
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-13
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	5e-49
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-18
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	8e-18
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-17
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-13
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	3e-44
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-21
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-15
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	7e-40
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	3e-17
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-10
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	9e-39
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-20
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-15
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	5e-38
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-21
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-15
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	6e-38
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-21
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	9e-16
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-37
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	8e-21
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-14
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-37
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-20
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-15
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-36
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-20
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-14
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-35
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-20
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-14
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-34
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-19
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	7e-15
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	2e-32
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	3e-19
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	3e-11
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-32
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-20
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	8e-16
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-32
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-15
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-15
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	7e-32
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	9e-20
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	4e-15
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-31
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	7e-19
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-16
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-31
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	4e-20
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-30
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-09
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-30
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	4e-19
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-15
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-30
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	5e-18
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-12
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	8e-30
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	9e-21
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-14
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-29
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-16
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-16
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-29
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	5e-19
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-09
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-28
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-15
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-14
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-28
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	6e-17
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-10
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-28
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	5e-20
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	9e-15
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-28
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-19
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	5e-16
4aoj_A	329	High affinity nerve growth factor receptor; transf	8e-28
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-19
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-11
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-27
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-18
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-13
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-27
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-15
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-15
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	4e-27
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-27
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	9e-12
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-09
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	5e-27
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-11
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	9e-09
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	8e-27
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	7e-18
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	8e-10
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-26
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	6e-18
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	8e-14
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-26
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-18
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-11
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-26
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-20
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-16
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	2e-26
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	3e-25
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	3e-26
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	2e-14
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	6e-26
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-17
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	4e-11
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	9e-26
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-17
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	8e-12
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-25
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-17
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	7e-12
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-25
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-18
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-12
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-25
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	6e-19
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	7e-11
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-25
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-10
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-08
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-25
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-16
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	5e-10
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-25
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-15
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-15
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	3e-25
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	5e-25
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-17
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-10
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	5e-25
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	6e-25
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	2e-24
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	1e-13
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	2e-24
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	1e-23
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-24
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-07
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-06
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-24
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	6e-19
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-15
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	5e-24
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	8e-17
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	8e-11
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	6e-24
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-09
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	6e-08
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	7e-24
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	1e-14
1awj_A	77	ITK; transferase, regulatory intramolecular comple	7e-24
1awj_A	77	ITK; transferase, regulatory intramolecular comple	5e-14
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	2e-23
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	2e-21
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	2e-23
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	4e-23
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	7e-21
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	5e-23
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	1e-16
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	2e-09
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-23
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-18
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	9e-12
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	3e-22
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	9e-21
2dly_A	121	FYN-related kinase; BRK family kinase, structural	3e-22
2dly_A	121	FYN-related kinase; BRK family kinase, structural	6e-20
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	3e-22
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	9e-13
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	3e-22
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	4e-22
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	1e-13
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	4e-22
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	5e-20
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	5e-22
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	4e-20
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	5e-22
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	3e-20
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	6e-22
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	2e-20
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	6e-22
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	3e-20
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	1e-21
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	1e-12
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	1e-20
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-20
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-18
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-14
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-20
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-07
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-05
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	2e-20
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	7e-20
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	1e-17
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	7e-16
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	2e-20
1wxb_A	68	Epidermal growth factor receptor pathway substrate	3e-20
1wxb_A	68	Epidermal growth factor receptor pathway substrate	6e-12
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	3e-20
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	7e-12
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	3e-20
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	4e-20
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	4e-20
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-20
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-07
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	9e-06
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	5e-20
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	3e-12
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	5e-20
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	7e-20
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	1e-11
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	8e-20
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	4e-18
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	9e-18
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	8e-17
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	8e-20
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	1e-19
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	2e-19
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	4e-19
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-19
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-17
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-13
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-19
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-17
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	8e-13
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	5e-19
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	6e-19
1i07_A	60	Epidermal growth factor receptor kinase substrate	7e-19
1i07_A	60	Epidermal growth factor receptor kinase substrate	3e-11
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	8e-19
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	1e-10
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	9e-19
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-06
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	7e-06
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	1e-18
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	1e-18
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	1e-18
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	2e-18
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	3e-18
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	1e-14
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	1e-09
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	5e-08
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	4e-18
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	3e-14
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	6e-18
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	4e-10
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	6e-18
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	6e-18
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	4e-16
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	2e-17
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	2e-17
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	2e-17
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-17
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-13
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	3e-17
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	3e-17
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	1e-16
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	3e-11
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	5e-10
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	9e-07
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	1e-16
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	2e-16
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	2e-13
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	2e-16
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	3e-15
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	2e-16
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	4e-16
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	2e-16
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	3e-16
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	5e-15
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	7e-16
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	7e-16
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	9e-16
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	2e-15
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	6e-15
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	3e-09
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	2e-15
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	3e-15
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	7e-08
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	3e-15
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	2e-07
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	4e-15
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	2e-12
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	4e-15
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	1e-09
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	4e-15
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	1e-07
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	5e-15
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	5e-15
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	1e-07
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	5e-15
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	8e-08
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	6e-15
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	5e-07
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	6e-15
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	1e-07
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	6e-15
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	7e-15
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	8e-15
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	4e-07
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	1e-14
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	5e-07
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	1e-14
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	6e-13
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	1e-14
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-14
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	1e-14
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	5e-13
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	2e-14
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	2e-13
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	2e-14
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	2e-14
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	1e-12
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	3e-14
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	1e-06
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	3e-14
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	5e-14
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	5e-14
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	2e-12
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	6e-14
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	1e-11
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	1e-11
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	2e-10
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	1e-08
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	5e-04
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	7e-14
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	7e-04
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	7e-14
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	5e-11
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	9e-14
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	3e-05
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	1e-13
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	1e-13
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	2e-11
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	1e-13
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	6e-08
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	2e-13
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	2e-06
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	3e-13
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	3e-07
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-13
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	9e-12
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	7e-13
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	2e-05
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	7e-13
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	4e-06
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	8e-13
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	7e-06
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	1e-12
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	3e-06
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	1e-12
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	2e-06
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	1e-12
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	7e-06
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	2e-12
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	2e-05
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	2e-12
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	1e-05
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	2e-12
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	2e-12
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	2e-12
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	2e-10
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	2e-12
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	4e-06
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	3e-12
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	5e-06
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	3e-12
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	4e-06
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	3e-12
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	3e-12
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	4e-07
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	3e-12
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	1e-05
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	3e-12
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	3e-06
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	4e-12
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	2e-06
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	4e-12
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	4e-05
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	4e-12
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	7e-07
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	5e-12
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	3e-05
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	6e-12
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	3e-05
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	7e-12
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	1e-06
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	8e-12
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	8e-06
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	9e-12
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	2e-06
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	9e-12
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	1e-10
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	9e-12
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	3e-07
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	1e-11
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	3e-06
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	1e-11
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	1e-06
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	1e-11
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	1e-06
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	1e-11
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	3e-06
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-11
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-11
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	7e-04
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	1e-11
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	2e-11
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	1e-07
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	2e-11
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	2e-11
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	1e-05
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	2e-11
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	1e-06
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	2e-11
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	3e-10
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	2e-11
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	2e-05
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	2e-11
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	7e-06
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	2e-11
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	3e-11
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	5e-07
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	3e-11
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	3e-11
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	4e-09
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	2e-06
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-11
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	3e-11
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	3e-11
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	4e-11
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	6e-05
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	4e-11
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	3e-04
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	4e-11
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	4e-05
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	4e-11
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	1e-04
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	5e-11
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	5e-11
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	5e-05
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	5e-11
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	5e-11
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	2e-04
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	6e-11
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	4e-05
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	7e-11
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	7e-11
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	7e-11
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	3e-05
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-11
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-04
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	8e-11
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	1e-04
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	9e-11
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	2e-04
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	9e-11
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	1e-04
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	9e-11
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	9e-11
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	2e-04
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	1e-10
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	1e-10
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	2e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-10
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	1e-10
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	6e-06
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	1e-10
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	8e-05
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	1e-10
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	1e-05
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	1e-10
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	2e-05
3u23_A	65	CD2-associated protein; structural genomics, struc	1e-10
3u23_A	65	CD2-associated protein; structural genomics, struc	3e-04
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	1e-10
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	2e-04
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	2e-10
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	9e-05
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	2e-10
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	3e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-10
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	3e-10
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	3e-10
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	3e-04
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	4e-10
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	2e-04
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-10
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	4e-10
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	4e-10
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	1e-05
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	4e-10
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	2e-04
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	4e-10
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	1e-04
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	4e-10
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	5e-10
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	7e-04
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	5e-10
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	1e-07
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	1e-06
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	9e-04
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	5e-10
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	5e-10
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	3e-05
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-10
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	6e-10
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	7e-04
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	6e-10
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	1e-04
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	7e-10
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	7e-05
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	7e-10
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	2e-05
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	7e-10
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	8e-10
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	7e-05
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	8e-10
3bhy_A	283	Death-associated protein kinase 3; death associate	8e-10
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	9e-10
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	1e-09
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	1e-09
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	5e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-09
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	1e-09
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	3e-04
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-09
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	1e-09
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	8e-05
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	1e-09
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	2e-09
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	1e-04
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	2e-09
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	1e-04
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	2e-09
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-09
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	2e-09
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-09
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-09
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	2e-09
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	3e-04
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	2e-09
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	3e-04
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-09
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens} Length	2e-09
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens} Length	4e-04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-09
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-09
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	3e-09
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	3e-09
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	4e-04
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-09
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	4e-09
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	5e-04
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	4e-09
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	6e-09
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	6e-09
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	1e-04
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	6e-09
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	7e-09
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	8e-09
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	1e-08
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	1e-08
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-08
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	2e-08
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	2e-08
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	2e-08
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	6e-04
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	2e-08
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	3e-08
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	3e-08
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	1e-05
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	3e-08
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	1e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	4e-08
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	5e-08
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	6e-08
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	9e-08
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	1e-07
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	3e-07
3a98_A	184	DOCK2, dedicator of cytokinesis protein 2; protein	4e-07
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	5e-07
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	5e-07
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-07
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	5e-07
1ug1_A	92	KIAA1010 protein; structural genomics, SH3 domain,	8e-07
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	8e-07
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	1e-06
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	4e-04
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	2e-06
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-06
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-06
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-06
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	5e-06
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	5e-06
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	3e-04
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	6e-06
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	7e-06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	8e-06
3r6n_A	450	Desmoplakin; spectrin repeat, SH3 domain, cell adh	8e-06
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	9e-06
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	9e-06
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	9e-06
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-05
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-05
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-05
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-05
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-05
1u3o_A	82	Huntingtin-associated protein-interacting protein;	3e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-05
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	3e-05
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-05
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	3e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	4e-05
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-05
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-05
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	5e-05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	5e-05
2dyl_A	318	Dual specificity mitogen-activated protein kinase	6e-05
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	7e-05
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	8e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-04
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-04
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-04
1uur_A	473	Stata protein, STAT protein; transcription activat	2e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-04
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-04
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-04
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-04
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-04
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-04
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-04
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-04
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-04
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	3e-04
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	3e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-04
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-04
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	5e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-04
3o0g_A	292	Cell division protein kinase 5; kinase activator c	5e-04
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	6e-04
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	6e-04
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	6e-04
2gtj_A	96	FYN-binding protein; SH3, redox, signaling protein	6e-04
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-04
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	8e-04
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	8e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	8e-04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	9e-04

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  218 bits (558), Expect = 5e-65
 Identities = 85/250 (34%), Positives = 134/250 (53%), Gaps = 17/250 (6%)

Query: 260 GDMSRQRAE--SILKQEDKEGCFVVRNSSTKGLYTLSLY-TKVPHPHVKHYHIKQNSRGE 316
            D+S ++ E   I+   + +       S+ +  Y  S Y         + ++  + +R E
Sbjct: 100 TDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRE 159

Query: 317 FFLSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSL--YTKVPHPHVKHYHIKQNSRG 373
              SE+   ++    ++  G F+VR S +TKG Y LS+  +      +VKHY I++   G
Sbjct: 160 ---SERLLLNA----ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSG 212

Query: 374 EFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELML 433
            F+++ +   +S+ ++V Y+  ++ GL  RL T+ C    P T GL+ D WEI    L L
Sbjct: 213 GFYITSRTQFNSLQQLVAYYSKHADGLCHRL-TTVCPTSKPQTQGLAKDAWEIPRESLRL 271

Query: 434 LEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVC 491
             +LG G FG V  G W G+  VA   +K GTMS + F++EA+VM +L+H+ LVQLY V 
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331

Query: 492 SKHRPIYIVT 501
           S+  PIYIVT
Sbjct: 332 SE-EPIYIVT 340

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 83.8 bits (207), Expect = 2e-17
 Identities = 23/54 (42%), Positives = 37/54 (68%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           +   Y RF+ KSDVW++G+L+ E+ T G++PY  + N EV+D+V+RG  +  P 
Sbjct: 434 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 487

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 73.8 bits (181), Expect = 4e-14
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKEL 183
               VALY +++    DLS +KG   +++++T+  WW       G  GYIPSNYV   + 
Sbjct: 85  VTTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS 144

Query: 184 LGLQKYD 190
           +  +++ 
Sbjct: 145 IQAEEWY 151

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 73.0 bits (179), Expect = 7e-14
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M  GSLL++L+         +  L+DM  Q+  GMAY+ER NY+HR
Sbjct: 343 MSKGSLLDFLKGETGKYL-RLPQLVDMAAQIASGMAYVERMNYVHR 387

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  212 bits (541), Expect = 2e-63
 Identities = 85/250 (34%), Positives = 133/250 (53%), Gaps = 17/250 (6%)

Query: 260 GDMSRQRAE--SILKQEDKEGCFVVRNSSTKGLYTLSLY-TKVPHPHVKHYHIKQNSRGE 316
            D+S ++ E   I+   + +       S+ +  Y  S Y         + ++  + +R E
Sbjct: 17  TDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRE 76

Query: 317 FFLSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSLYTK--VPHPHVKHYHIKQNSRG 373
              SE+   ++    ++  G F+VR S +TKG Y LS+         +VKHY I++   G
Sbjct: 77  ---SERLLLNA----ENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSG 129

Query: 374 EFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELML 433
            F+++ +   +S+ ++V Y+  ++ GL  RL T+ C    P T GL+ D WEI    L L
Sbjct: 130 GFYITSRTQFNSLQQLVAYYSKHADGLCHRL-TTVCPTSKPQTQGLAKDAWEIPRESLRL 188

Query: 434 LEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVC 491
             +LG G FG V  G W G+  VA   +K GTMS + F++EA+VM +L+H+ LVQLY V 
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248

Query: 492 SKHRPIYIVT 501
           S+  PIYIVT
Sbjct: 249 SEE-PIYIVT 257

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 82.9 bits (205), Expect = 3e-17
 Identities = 23/54 (42%), Positives = 37/54 (68%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           +   Y RF+ KSDVW++G+L+ E+ T G++PY  + N EV+D+V+RG  +  P 
Sbjct: 351 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 404

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 72.1 bits (177), Expect = 1e-13
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M  GSLL++L+         +  L+DM  Q+  GMAY+ER NY+HR
Sbjct: 260 MSKGSLLDFLKGETGKYL-RLPQLVDMAAQIASGMAYVERMNYVHR 304

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  211 bits (539), Expect = 1e-62
 Identities = 61/175 (34%), Positives = 101/175 (57%), Gaps = 11/175 (6%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
             G F+VR S S+ G  ++SL  +     V HY I   S G+ ++S +   +++ E+V++
Sbjct: 125 INGSFLVRESESSPGQRSISLRYEG---RVYHYRINTASDGKLYVSSESRFNTLAELVHH 181

Query: 393 HRHNSGGLASRLKTSPC---DRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGK 449
           H   + GL + L   P    ++P       ++DKWE++  ++ +  +LG GQ+G V  G 
Sbjct: 182 HSTVADGLITTL-HYPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGV 240

Query: 450 WRG-SIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           W+  S+ VA   +KE TM  ++F++EA VM  ++H NLVQL GVC++  P YI+T
Sbjct: 241 WKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 85.6 bits (212), Expect = 6e-18
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKEL 183
            P + VALY F A     LS+ KG +  V+       W         G++PSNY+     
Sbjct: 42  DPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVN- 100

Query: 184 LGLQKYD 190
             L+K+ 
Sbjct: 101 -SLEKHS 106

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 84.1 bits (208), Expect = 2e-17
 Identities = 22/54 (40%), Positives = 37/54 (68%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + L Y +FS KSDVWA+GVL+WE+ T G  PY  +  ++V + +++   +E+P+
Sbjct: 389 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE 442

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 72.1 bits (177), Expect = 1e-13
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M +G+LL+YLR        +  +LL M  Q+   M YLE+ N+IHR
Sbjct: 298 MTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKNFIHR 342

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 59.4 bits (144), Expect = 1e-09
 Identities = 13/45 (28%), Positives = 17/45 (37%)

Query: 71  RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
            P + VALY F A     LS+ KG +  V+       W       
Sbjct: 42  DPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKN 86

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  203 bits (519), Expect = 4e-60
 Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 8/174 (4%)

Query: 333 DKEGCFVVRNS-STKGLYTLSLYTKVP--HPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV 389
           +  G F++R+S +TKG Y+LS+    P     VKHY I+    G F++S +    ++ E+
Sbjct: 91  NMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQEL 150

Query: 390 VNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGK 449
           V++++  + GL  +L + PC    P       D WEI    L L ++LG+GQFG V    
Sbjct: 151 VDHYKKGNDGLCQKL-SVPCMSSKPQKPW-EKDAWEIPRESLKLEKKLGAGQFGEVWMAT 208

Query: 450 WRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           +     VA   MK G+MS + F+ EA VM  LQH  LV+L+ V +K  PIYI+T
Sbjct: 209 YNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-PIYIIT 261

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 89.0 bits (221), Expect = 3e-19
 Identities = 20/52 (38%), Positives = 36/52 (69%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
            +N+  F+ KSDVW++G+L+ E+ T G++PY  + N EV+  ++RG  + +P
Sbjct: 356 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRP 407

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 75.1 bits (185), Expect = 1e-14
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKELL 184
            +VVALY ++AI   DLS +KG +  V++++   WWK +       GYIPSNYV   +  
Sbjct: 9   IIVVALYDYEAIHHEDLSFQKGDQMVVLEES-GEWWKARSLATRKEGYIPSNYVARVD-- 65

Query: 185 GLQKYD 190
            L+  +
Sbjct: 66  SLETEE 71

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 71.3 bits (175), Expect = 2e-13
 Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M  GSLL++L+  E +    +  L+D   Q+ +GMA++E+ NYIHR
Sbjct: 264 MAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNYIHR 308

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  201 bits (513), Expect = 5e-60
 Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 17/173 (9%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
             G F+VR S  K  Y LS+         +H+ I+       +  E     SIP ++++ 
Sbjct: 31  HSGDFLVRESQGKQEYVLSVLWD---GLPRHFIIQSL--DNLYRLEGEGFPSIPLLIDHL 85

Query: 394 RHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG- 452
                 L  +       R VP       DKW ++  +L+L E++G G FG V  G+ R  
Sbjct: 86  LSTQQPLTKKSG-VVLHRAVP------KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRAD 138

Query: 453 SIDVA--MMKEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           +  VA    +E    +    F++EA+++ +  H N+V+L GVC++ +PIYIV 
Sbjct: 139 NTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 91.2 bits (227), Expect = 4e-20
 Identities = 24/53 (45%), Positives = 36/53 (67%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
            LNY R+SS+SDVW++G+L+WE F+ G  PY  L N +  + V++G  L  P+
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPE 338

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 73.4 bits (181), Expect = 2e-14
 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           ++ G  L +LR     L   V  LL M      GM YLE    IHR
Sbjct: 194 VQGGDFLTFLRTEGARL--RVKTLLQMVGDAAAGMEYLESKCCIHR 237

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  196 bits (500), Expect = 3e-57
 Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 11/173 (6%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
           + G F+VR S +  G YTL +  +     V+HY I  ++  +  + E+    ++ ++V +
Sbjct: 100 ETGLFLVRESTNYPGDYTLCVSCEG---KVEHYRIMYHA-SKLSIDEEVYFENLMQLVEH 155

Query: 393 HRHNSGGLASRL-KTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWR 451
           +  ++ GL +RL K    +  V A        W ++  EL LL+ +G G+FG V  G +R
Sbjct: 156 YTTDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR 215

Query: 452 GSIDVA--MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP-IYIVT 501
           G+  VA   +K    ++  F+ EA VMT+L+H NLVQL GV  + +  +YIVT
Sbjct: 216 GN-KVAVKCIKNDATAQ-AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 88.2 bits (219), Expect = 6e-19
 Identities = 22/53 (41%), Positives = 39/53 (73%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
            L   +FS+KSDVW++G+L+WE+++ G++PY R+   +VV RV++G  ++ P 
Sbjct: 357 ALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD 409

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 79.7 bits (197), Expect = 3e-16
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE-HWWKVKDKNGSVGYIPSNYVKEKE 182
              +A Y F      DL   KG    ++  T++ +W+K K+K G  G IP+NYV+++E
Sbjct: 12  TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 69

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 71.2 bits (175), Expect = 2e-13
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M  GSL++YLR    ++      LL   + VC+ M YLE +N++HR
Sbjct: 269 MAKGSLVDYLRSRGRSVL-GGDCLLKFSLDVCEAMEYLEGNNFVHR 313

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  177 bits (450), Expect = 5e-49
 Identities = 63/331 (19%), Positives = 116/331 (35%), Gaps = 30/331 (9%)

Query: 193 NGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILE 252
           +GL   L       +    +  V+             +      +  E     Q   + +
Sbjct: 92  DGLPCNLRKPCNRPSGLEPQPGVFDCLRDAMVRDYVRQTWKLEGEALEQAIISQAPQVEK 151

Query: 253 KPKA-------WYVGDMSRQRAESILKQ-EDKEGCFVVRNSSTKGLYTLSLYTKVPHPHV 304
                      WY   ++R+ AE  L      +G F++R    +G Y LSL        V
Sbjct: 152 LIATTAHERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYG---KTV 208

Query: 305 KHYHIKQNSRGEFFLSEKHCCHSIPEV------KDKEGCFVVRNSSTKGLYTLSLYTKVP 358
            HY I Q+  G++ + E     ++ ++      K     + ++ +      + +     P
Sbjct: 209 YHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKADGLIYCLKEACPNSSASNASGAAAP 268

Query: 359 HPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAG 418
                   +    R      +                        + TS  + P      
Sbjct: 269 TLPAHPSTLTHPQRR----IDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEE 324

Query: 419 LSHDKWEIDPAELMLLE-ELGSGQFGVVRRGKWR---GSIDVA--MMKEGT--MSEDDFI 470
           L   K  +    L++ + ELG G FG VR+G +R     IDVA  ++K+GT     ++ +
Sbjct: 325 LKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMM 384

Query: 471 EEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
            EA++M +L +  +V+L GVC     + +V 
Sbjct: 385 REAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 87.7 bits (217), Expect = 2e-18
 Identities = 23/51 (45%), Positives = 37/51 (72%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ +FSS+SDVW+YGV MWE  + G+ PY ++K  EV+  +++G  +E P
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 561

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 85.4 bits (211), Expect = 8e-18
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 5/76 (6%)

Query: 257 WYVGDMSRQRAESILKQ-EDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           ++ G +SR  AE  LK     +G F++R    + G Y LSL          H+ I++   
Sbjct: 10  FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVH---DVRFHHFPIERQLN 66

Query: 315 GEFFLSEKHCCHSIPE 330
           G + ++         E
Sbjct: 67  GTYAIAGGKAHCGPAE 82

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 83.8 bits (207), Expect = 3e-17
 Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 5/81 (6%)

Query: 333 DKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN 391
             +G F++R    + G Y LSL          H+ I++   G + ++         E+  
Sbjct: 29  MADGLFLLRQCLRSLGGYVLSLVH---DVRFHHFPIERQLNGTYAIAGGKAHCGPAELCE 85

Query: 392 YHRHNSGGLASRLKTSPCDRP 412
           ++  +  GL   L   PC+RP
Sbjct: 86  FYSRDPDGLPCNL-RKPCNRP 105

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 71.9 bits (176), Expect = 2e-13
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
              G L  +L      +   V  + ++  QV  GM YLE  N++HR
Sbjct: 417 AGGGPLHKFLVGKREEI--PVSNVAELLHQVSMGMKYLEEKNFVHR 460

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  156 bits (397), Expect = 3e-44
 Identities = 62/97 (63%), Positives = 76/97 (78%), Gaps = 3/97 (3%)

Query: 408 PC-DRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTM 464
           P   +  P+TAGL +  WEIDP +L  L+ELG+GQFGVV+ GKWRG  DVA  M+KEG+M
Sbjct: 2   PLGSKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM 61

Query: 465 SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           SED+FIEEAKVM  L H+ LVQLYGVC+K RPI+I+T
Sbjct: 62  SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 92.7 bits (231), Expect = 4e-21
 Identities = 28/53 (52%), Positives = 41/53 (77%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           VL Y++FSSKSD+WA+GVLMWE+++ GKMPY R  N+E  + + +G+ L +P 
Sbjct: 192 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPH 244

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M +G LLNYLR   +        LL+MC  VC+ M YLE   ++HR
Sbjct: 101 MANGCLLNYLREMRHRF--QTQQLLEMCKDVCEAMEYLESKQFLHR 144

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  147 bits (373), Expect = 7e-40
 Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 14/154 (9%)

Query: 362 VKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSH 421
           + +YH   +   +   +E    + +    ++H H+     +            +   L  
Sbjct: 1   MGYYHHHHHHDYDIPTTENLYFNGMGYYHHHHHHDYDIPTTENLYFQGMLAGVSEYELPE 60

Query: 422 -DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVA--MMKEGTMSED--D 468
             +WE+    L+L + LG G FG V   +  G           VA  M+K     +D  D
Sbjct: 61  DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD 120

Query: 469 FIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVT 501
            I E ++M  + +H+N++ L G C++  P+Y++ 
Sbjct: 121 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 154

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 82.4 bits (204), Expect = 3e-17
 Identities = 19/52 (36%), Positives = 32/52 (61%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L    ++ +SDVW++GVL+WE+FT G  PY  +   E+   ++ G  ++KP 
Sbjct: 265 LFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 316

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 61.6 bits (150), Expect = 2e-10
 Identities = 14/59 (23%), Positives = 18/59 (30%), Gaps = 13/59 (22%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL-------------LLDMCIQVCKGMAYLERHNYIHR 46
              G+L  YL+                         L+    QV +GM YL     IHR
Sbjct: 157 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 215

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  142 bits (361), Expect = 9e-39
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)

Query: 390 VNYHRHNSGGLAS----------RLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGS 439
           +++H H+S G  +          +    P     P  AG S    EI+ + + + + +GS
Sbjct: 1   MHHHHHHSSGRENLYFQGKLPEPQFYAEPHTYEEPGRAGRS-FTREIEASRIHIEKIIGS 59

Query: 440 GQFGVVRRGKWR----GSIDVA--MMKEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVC 491
           G  G V  G+ R      + VA   +K G       DF+ EA +M +  H N+++L GV 
Sbjct: 60  GDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV 119

Query: 492 SKHRPIYIVT 501
           ++ R   IVT
Sbjct: 120 TRGRLAMIVT 129

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 90.8 bits (226), Expect = 3e-20
 Identities = 22/52 (42%), Positives = 32/52 (61%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
            + +  FSS SDVW++GV+MWEV   G+ PY  + N +V+  V+ G  L  P
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAP 276

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 75.8 bits (187), Expect = 3e-15
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M +GSL  +LR H+      +  L+ M   V  GM YL    Y+HR
Sbjct: 132 MENGSLDTFLRTHDGQF--TIMQLVGMLRGVGAGMRYLSDLGYVHR 175

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  139 bits (352), Expect = 5e-38
 Identities = 49/81 (60%), Positives = 61/81 (75%), Gaps = 2/81 (2%)

Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQ 480
             E+   E+ LL+ELGSGQFGVV+ GKW+G  DVA  M+KEG+MSED+F +EA+ M +L 
Sbjct: 2   HMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLS 61

Query: 481 HQNLVQLYGVCSKHRPIYIVT 501
           H  LV+ YGVCSK  PIYIVT
Sbjct: 62  HPKLVKFYGVCSKEYPIYIVT 82

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 91.9 bits (229), Expect = 4e-21
 Identities = 30/53 (56%), Positives = 40/53 (75%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           V +Y ++SSKSDVWA+G+LMWEVF+ GKMPY    N+EVV +V +G  L +P 
Sbjct: 176 VFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPH 228

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           + +G LLNYLR H   L      LL+MC  VC+GMA+LE H +IHR
Sbjct: 85  ISNGCLLNYLRSHGKGL--EPSQLLEMCYDVCEGMAFLESHQFIHR 128

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  139 bits (352), Expect = 6e-38
 Identities = 46/81 (56%), Positives = 58/81 (71%), Gaps = 2/81 (2%)

Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQ 480
           KW IDP+EL  ++E+GSGQFG+V  G W     VA   ++EG MSE+DFIEEA+VM +L 
Sbjct: 2   KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS 61

Query: 481 HQNLVQLYGVCSKHRPIYIVT 501
           H  LVQLYGVC +  PI +VT
Sbjct: 62  HPKLVQLYGVCLEQAPICLVT 82

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 92.3 bits (230), Expect = 3e-21
 Identities = 29/53 (54%), Positives = 41/53 (77%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           V +++R+SSKSDVW++GVLMWEVF+ GK+PY    N+EVV+ +  G  L KP+
Sbjct: 176 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 228

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 76.5 bits (189), Expect = 9e-16
 Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M HG L +YLR            LL MC+ VC+GMAYLE    IHR
Sbjct: 85  MEHGCLSDYLRTQRGLF--AAETLLGMCLDVCEGMAYLEEACVIHR 128

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  138 bits (351), Expect = 1e-37
 Identities = 37/85 (43%), Positives = 58/85 (68%), Gaps = 3/85 (3%)

Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG-SIDVA--MMKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+  S+ VA   +KE TM  ++F++EA VM
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63

Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
             ++H NLVQL GVC++  P YI+T
Sbjct: 64  KEIKHPNLVQLLGVCTREPPFYIIT 88

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 91.5 bits (228), Expect = 8e-21
 Identities = 22/53 (41%), Positives = 36/53 (67%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
            L Y +FS KSDVWA+GVL+WE+ T G  PY  +  ++V + +++   +E+P+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE 235

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M +G+LL+YLR        +  +LL M  Q+   M YLE+ N+IHR
Sbjct: 91  MTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKNFIHR 135

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  138 bits (351), Expect = 3e-37
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 12/125 (9%)

Query: 388 EVVNYHRHNSGGLASRLKT--SPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVV 445
              ++H H+   + +             P  A L     EI P+ +   + +G+G+FG V
Sbjct: 2   SYYHHHHHHDYDIPTTENLYFQGAMGSDPNQAVLK-FTTEIHPSCVTRQKVIGAGEFGEV 60

Query: 446 RRGKWRGS-----IDVA--MMKEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRP 496
            +G  + S     + VA   +K G   +   DF+ EA +M +  H N+++L GV SK++P
Sbjct: 61  YKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120

Query: 497 IYIVT 501
           + I+T
Sbjct: 121 MMIIT 125

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 90.5 bits (225), Expect = 4e-20
 Identities = 23/52 (44%), Positives = 34/52 (65%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
            ++Y +F+S SDVW++G++MWEV T G+ PY  L N EV+  +  G  L  P
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP 272

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 76.6 bits (189), Expect = 2e-15
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M +G+L  +LR  +      V  L+ M   +  GM YL   NY+HR
Sbjct: 128 MENGALDKFLREKDGEFS--VLQLVGMLRGIAAGMKYLANMNYVHR 171

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  135 bits (342), Expect = 2e-36
 Identities = 40/82 (48%), Positives = 55/82 (67%), Gaps = 3/82 (3%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRL 479
           D+WE+    L L+E LG+GQFG V  G + G   VA   +K+G+MS D F+ EA +M +L
Sbjct: 6   DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65

Query: 480 QHQNLVQLYGVCSKHRPIYIVT 501
           QHQ LV+LY V ++  PIYI+T
Sbjct: 66  QHQRLVRLYAVVTQ-EPIYIIT 86

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 90.7 bits (226), Expect = 1e-20
 Identities = 21/52 (40%), Positives = 36/52 (69%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
            +NY  F+ KSDVW++G+L+ E+ T G++PY  + N EV+  ++RG  + +P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 232

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 71.9 bits (177), Expect = 4e-14
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M +GSL+++L+         +  LLDM  Q+ +GMA++E  NYIHR
Sbjct: 89  MENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERNYIHR 133

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  132 bits (335), Expect = 2e-35
 Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 5/93 (5%)

Query: 412 PVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDF 469
            V A        W ++  EL LL+ +G G+FG V  G +RG+  VA   +K    ++  F
Sbjct: 4   SVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGN-KVAVKCIKNDATAQ-AF 61

Query: 470 IEEAKVMTRLQHQNLVQLYGVCSKHRP-IYIVT 501
           + EA VMT+L+H NLVQL GV  + +  +YIVT
Sbjct: 62  LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 90.7 bits (226), Expect = 1e-20
 Identities = 22/52 (42%), Positives = 39/52 (75%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
            L   +FS+KSDVW++G+L+WE+++ G++PY R+   +VV RV++G  ++ P
Sbjct: 185 ALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 236

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 72.2 bits (178), Expect = 3e-14
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M  GSL++YLR    ++      LL   + VC+ M YLE +N++HR
Sbjct: 97  MAKGSLVDYLRSRGRSVL-GGDCLLKFSLDVCEAMEYLEGNNFVHR 141

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  131 bits (332), Expect = 3e-34
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 11/120 (9%)

Query: 392 YHRHNSGGLASRLKT--SPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGK 449
            H  N       L+T   P     P    +     E+D   + + + +G+G+FG V  G+
Sbjct: 7   LHFGNGHLKLPGLRTFVDPHTFEDPTQT-VHEFAKELDATNISIDKVVGAGEFGEVCSGR 65

Query: 450 W----RGSIDVA--MMKEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
                +  I VA   +K G   +   DF+ EA +M +  H N+++L GV +K +P+ IVT
Sbjct: 66  LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 88.2 bits (219), Expect = 3e-19
 Identities = 21/52 (40%), Positives = 33/52 (63%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
            + Y +F+S SDVW+YG+++WEV + G+ PY  + N +V+  V  G  L  P
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 75.1 bits (185), Expect = 7e-15
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M +GSL ++LR+H+      V  L+ M   +  GM YL    Y+HR
Sbjct: 128 MENGSLDSFLRKHDAQF--TVIQLVGMLRGIASGMKYLSDMGYVHR 171

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score =  123 bits (309), Expect = 2e-32
 Identities = 38/225 (16%), Positives = 74/225 (32%), Gaps = 72/225 (32%)

Query: 257 WYVGDMS-----RQRAESILKQED-----KEGCFVVRNS-STKGLYTLSLYTKVPHPHVK 305
           W+ G +      R  AE +L +        +G F+VR S +  G YTLS +       V+
Sbjct: 6   WFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRN---GKVQ 62

Query: 306 HYHIKQ---NSRGEFFLSEKHCCHSIPEV------------------------------- 331
           H  I         +FFL++     S+ ++                               
Sbjct: 63  HCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQQVPLRCNEFEMRLSEPVPQTNAHESK 122

Query: 332 ------------------KDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRG 373
                               ++G F+VR  +    Y +S   +     +KH  ++Q   G
Sbjct: 123 EWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAE---GKIKHCRVQQE--G 177

Query: 374 EFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAG 418
           +  +       S+ ++++Y+  +      +L+  P +       G
Sbjct: 178 QTVMLGNSEFDSLVDLISYYEKHPLYRKMKLR-YPINEEALEKIG 221

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 85.7 bits (212), Expect = 3e-19
 Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 5/77 (6%)

Query: 254 PKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNS 313
            K WY   ++R +AE +L +  ++G F+VR  +    Y +S   +     +KH  ++Q  
Sbjct: 121 SKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAE---GKIKHCRVQQE- 176

Query: 314 RGEFFLSEKHCCHSIPE 330
            G+  +       S+ +
Sbjct: 177 -GQTVMLGNSEFDSLVD 192

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 62.2 bits (151), Expect = 3e-11
 Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 11/120 (9%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ---NSRGEFFLSEKHCCHSIPEV 389
            +G F+VR S +  G YTLS +       V+H  I         +FFL++     S+ ++
Sbjct: 35  PDGSFLVRESETFVGDYTLSFWRN---GKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYDL 91

Query: 390 VNYHRHN---SGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVR 446
           + +++           RL           +    H       AE ML+     G F +VR
Sbjct: 92  ITHYQQVPLRCNEFEMRLSEPVPQTNAHESKEWYHASLTRAQAEHMLMRVPRDGAF-LVR 150

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  124 bits (314), Expect = 2e-32
 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 9/91 (9%)

Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVA--MMKEGTM--SEDDFI 470
           +   ++ I   +++L   LG G FG V  G +       I+VA    K+     +++ F+
Sbjct: 2   MGGPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFM 61

Query: 471 EEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
            EA +M  L H ++V+L G+  +  P +I+ 
Sbjct: 62  SEAVIMKNLDHPHIVKLIGIIEEE-PTWIIM 91

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 90.3 bits (225), Expect = 2e-20
 Identities = 21/52 (40%), Positives = 35/52 (67%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
            +N+ RF++ SDVW + V MWE+ + GK P+  L+N +V+  +++G  L KP
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKP 236

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 76.9 bits (190), Expect = 8e-16
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
             +G L +YL R++N+L   V  L+   +Q+CK MAYLE  N +HR
Sbjct: 94  YPYGELGHYLERNKNSL--KVLTLVLYSLQICKAMAYLESINCVHR 137

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  125 bits (316), Expect = 2e-32
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 10/123 (8%)

Query: 389 VVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG 448
           +  YH H+          +   +    +A    D  + +   L  L++LG G FG V   
Sbjct: 1   MSYYHHHHHHDYDIPTTENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMC 60

Query: 449 KWRGSID-----VA--MMKEGTMSE-DDFIEEAKVMTRLQHQNLVQLYGVC--SKHRPIY 498
           ++    D     VA   ++  T     DF  E +++  LQH N+V+  GVC  +  R + 
Sbjct: 61  RYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120

Query: 499 IVT 501
           ++ 
Sbjct: 121 LIM 123

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 77.0 bits (190), Expect = 1e-15
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 15/66 (22%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT---------------CGKMPYGRLKNTEVVDRVQRG 248
           L  ++FS  SDVW++GV+++E+FT                G    G++    +++ ++  
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 279

Query: 249 IILEKP 254
             L +P
Sbjct: 280 GRLPRP 285

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 76.3 bits (188), Expect = 2e-15
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           + +GSL +YL++H+  +      LL    Q+CKGM YL    YIHR
Sbjct: 126 LPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLGTKRYIHR 169

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  122 bits (309), Expect = 7e-32
 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 9/95 (9%)

Query: 415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWR----GSIDVA--MMKEGTMSE-- 466
              G S   +EI    + L   +G GQFG V +G +      ++ VA    K  T     
Sbjct: 1   GAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR 60

Query: 467 DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           + F++EA  M +  H ++V+L GV +++ P++I+ 
Sbjct: 61  EKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIM 94

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 88.4 bits (220), Expect = 9e-20
 Identities = 22/51 (43%), Positives = 33/51 (64%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF+S SDVW +GV MWE+   G  P+  +KN +V+ R++ G  L  P
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 239

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 75.0 bits (185), Expect = 4e-15
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
              G L ++L+  + +L  ++  L+    Q+   +AYLE   ++HR
Sbjct: 97  CTLGELRSFLQVRKYSL--DLASLILYAYQLSTALAYLESKRFVHR 140

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  122 bits (308), Expect = 1e-31
 Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 11/97 (11%)

Query: 415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVA--MMKEGTMSE-- 466
               L      I   +L LLE+LG G FGVVRRG+W      ++ VA   +K   +S+  
Sbjct: 4   GEGPLQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE 63

Query: 467 --DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
             DDFI E   M  L H+NL++LYGV     P+ +VT
Sbjct: 64  AMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVT 99

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 86.1 bits (214), Expect = 7e-19
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQR-GIILEKP 254
            L    FS  SD W +GV +WE+FT G+ P+  L  ++++ ++ + G  L +P
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP 247

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
              GSLL+ LR+H+      +G L    +QV +GM YLE   +IHR
Sbjct: 102 APLGSLLDRLRKHQGHFL--LGTLSRYAVQVAEGMGYLESKRFIHR 145

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  121 bits (307), Expect = 2e-31
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 12/96 (12%)

Query: 418 GLSH---DKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSE 466
           G  H       I   +++L  ELG G FG V   +          + VA   +K+ T++ 
Sbjct: 1   GAMHSGIHVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA 60

Query: 467 -DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
             DF  EA+++T LQH+++V+ YGVC    P+ +V 
Sbjct: 61  RKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVF 96

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 89.6 bits (223), Expect = 4e-20
 Identities = 24/52 (46%), Positives = 43/52 (82%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + Y +F+++SDVW++GV++WE+FT GK P+ +L NTEV++ + +G +LE+P+
Sbjct: 207 IMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPR 258

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 65.3 bits (160), Expect = 6e-12
 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 13/59 (22%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL-------------LLDMCIQVCKGMAYLERHNYIHR 46
           M+HG L  +LR H       V               +L +  Q+  GM YL   +++HR
Sbjct: 99  MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHR 157

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  119 bits (300), Expect = 2e-30
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 11/89 (12%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVA--MMKEGTMS-EDDFIEE 472
            +I   +L+  E LG G F  + +G  R           +V   ++ +   +  + F E 
Sbjct: 3   HKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA 62

Query: 473 AKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           A +M++L H++LV  YGVC       +V 
Sbjct: 63  ASMMSKLSHKHLVLNYGVCVCGDENILVQ 91

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 86.6 bits (215), Expect = 4e-19
 Identities = 12/53 (22%), Positives = 23/53 (43%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + N    +  +D W++G  +WE+ + G  P   L +   +   +    L  PK
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPK 241

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 76.2 bits (188), Expect = 1e-15
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           ++ GSL  YL++++N +  N+   L++  Q+   M +LE +  IH 
Sbjct: 94  VKFGSLDTYLKKNKNCI--NILWKLEVAKQLAAAMHFLEENTLIHG 137

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  120 bits (303), Expect = 2e-30
 Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 24/152 (15%)

Query: 374 EFFLSEKHCCHSIPEVVNYHRHNSGGLA--------SRLKTSPCDR---PVPATAGLSH- 421
            ++    H  + IP   N +   + G          S+L+TS       P    AG +  
Sbjct: 2   SYYHHHHHHDYDIPTTENLYFQGAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSS 61

Query: 422 --DKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DF 469
             D  E+    + L+  LG G FG V  G+  G       + VA   + E    +D  DF
Sbjct: 62  ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 121

Query: 470 IEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           + EA ++++  HQN+V+  GV  +  P +I+ 
Sbjct: 122 LMEALIISKFNHQNIVRCIGVSLQSLPRFILL 153

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 84.8 bits (210), Expect = 5e-18
 Identities = 22/52 (42%), Positives = 33/52 (63%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
                F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 258 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 309

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 68.6 bits (168), Expect = 1e-12
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL----LLDMCIQVCKGMAYLERHNYIHR 46
           M  G L ++LR           L    LL +   +  G  YLE +++IHR
Sbjct: 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR 205

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  117 bits (295), Expect = 8e-30
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 10/92 (10%)

Query: 419 LSHDKWEIDPAELMLLE-ELGSGQFGVVRRGKWRGS---IDVA--MMKEGTMS---EDDF 469
           +   +  +D   L L + ELGSG FG V++G ++       VA  ++K        +D+ 
Sbjct: 6   IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL 65

Query: 470 IEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           + EA VM +L +  +V++ G+C       +V 
Sbjct: 66  LAEANVMQQLDNPYIVRMIGICEAE-SWMLVM 96

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 91.5 bits (228), Expect = 9e-21
 Identities = 25/52 (48%), Positives = 37/52 (71%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
            +NY +FSSKSDVW++GVLMWE F+ G+ PY  +K +EV   +++G  +  P
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 242

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
              G L  YL+++ +        ++++  QV  GM YLE  N++HR
Sbjct: 99  AELGPLNKYLQQNRHV---KDKNIIELVHQVSMGMKYLEESNFVHR 141

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  116 bits (293), Expect = 1e-29
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 10/91 (10%)

Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VA--MMKEGTMSE-DDFIEE 472
            D  + +   L  L++LG G FG V   ++    D     VA   ++  T     DF  E
Sbjct: 2   SDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 61

Query: 473 AKVMTRLQHQNLVQLYGVCSK--HRPIYIVT 501
            +++  LQH N+V+  GVC     R + ++ 
Sbjct: 62  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 92

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 77.7 bits (192), Expect = 4e-16
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 15/66 (22%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFT---------------CGKMPYGRLKNTEVVDRVQRG 248
           L  ++FS  SDVW++GV+++E+FT                G    G++    +++ ++  
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248

Query: 249 IILEKP 254
             L +P
Sbjct: 249 GRLPRP 254

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 76.9 bits (190), Expect = 8e-16
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           + +GSL +YL++H+  +  +   LL    Q+CKGM YL    YIHR
Sbjct: 95  LPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHR 138

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  116 bits (293), Expect = 4e-29
 Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 10/119 (8%)

Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG 452
               S  L  RL  +P  + +P          E     +  + ++G G FG V + +  G
Sbjct: 11  TTLPSELLLDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPG 70

Query: 453 SID------VA--MMKEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
            +       VA  M+KE   ++   DF  EA +M    + N+V+L GVC+  +P+ ++ 
Sbjct: 71  LLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLF 129

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 87.4 bits (217), Expect = 5e-19
 Identities = 23/52 (44%), Positives = 37/52 (71%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + Y R++++SDVWAYGV++WE+F+ G  PY  + + EV+  V+ G IL  P+
Sbjct: 248 IFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPE 299

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 58.9 bits (143), Expect = 1e-09
 Identities = 15/67 (22%), Positives = 22/67 (32%), Gaps = 21/67 (31%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL---------------------LLDMCIQVCKGMAYLE 39
           M +G L  +LR        ++                        L +  QV  GMAYL 
Sbjct: 132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS 191

Query: 40  RHNYIHR 46
              ++HR
Sbjct: 192 ERKFVHR 198

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  115 bits (289), Expect = 1e-28
 Identities = 24/122 (19%), Positives = 43/122 (35%), Gaps = 23/122 (18%)

Query: 391 NYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKW 450
           ++H H+  G    L   P D                    L  + +LG G FG V    +
Sbjct: 5   HHHHHHHHGALEVLFQGPGD------------PTVFHKRYLKKIRDLGEGHFGKVSLYCY 52

Query: 451 RGSID-----VA--MMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHR--PIYI 499
             + D     VA   +K   G      + +E  ++  L H+++++  G C       + +
Sbjct: 53  DPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112

Query: 500 VT 501
           V 
Sbjct: 113 VM 114

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 75.1 bits (185), Expect = 5e-15
 Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 14/67 (20%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGK--------------MPYGRLKNTEVVDRVQRGI 249
           L   +F   SDVW++GV ++E+ T                 +  G++    + + ++RG 
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268

Query: 250 ILEKPKA 256
            L +P  
Sbjct: 269 RLPRPDK 275

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 72.0 bits (177), Expect = 5e-14
 Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 4/46 (8%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           +  GSL +YL RH   L      LL    Q+C+GMAYL   +YIHR
Sbjct: 117 VPLGSLRDYLPRHSIGLA----QLLLFAQQICEGMAYLHAQHYIHR 158

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  115 bits (290), Expect = 2e-28
 Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)

Query: 362 VKHYHIKQNSRGEFFLSEKHCC--HSIPEVVNYHRHNSGGLASRLKTSPCD-RPVPATAG 418
             H+H  Q+      L+++            +    NS     R+ T        P  AG
Sbjct: 5   HHHHHHSQDPPAVHKLTKRIPLRRQVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAG 64

Query: 419 LSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVA--MMKEG 462
           +S        KWE    +L L + LG G FG V   +  G        ++ VA  M+K+ 
Sbjct: 65  VSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 124

Query: 463 TMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVT 501
              +D  D + E ++M  + +H+N++ L G C++  P+Y++ 
Sbjct: 125 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 166

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 81.3 bits (201), Expect = 6e-17
 Identities = 20/52 (38%), Positives = 32/52 (61%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L    ++ +SDVW++GVLMWE+FT G  PY  +   E+   ++ G  ++KP 
Sbjct: 277 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 328

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 60.8 bits (148), Expect = 3e-10
 Identities = 14/59 (23%), Positives = 18/59 (30%), Gaps = 13/59 (22%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL-------------LLDMCIQVCKGMAYLERHNYIHR 46
              G+L  YLR                         L+    Q+ +GM YL     IHR
Sbjct: 169 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR 227

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  113 bits (284), Expect = 3e-28
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 9/88 (10%)

Query: 422 DKWEIDPAELMLLE-ELGSGQFGVVRRGKWR---GSIDVA--MMKEGT--MSEDDFIEEA 473
            K  +    L++ + ELG G FG VR+G +R     IDVA  ++K+GT     ++ + EA
Sbjct: 2   KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 61

Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           ++M +L +  +V+L GVC     + +V 
Sbjct: 62  QIMHQLDNPYIVRLIGVCQAE-ALMLVM 88

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 89.2 bits (222), Expect = 5e-20
 Identities = 23/52 (44%), Positives = 37/52 (71%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
            +N+ +FSS+SDVW+YGV MWE  + G+ PY ++K  EV+  +++G  +E P
Sbjct: 184 CINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 235

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 73.8 bits (182), Expect = 9e-15
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
              G L  +L      +   V  + ++  QV  GM YLE  N++HR
Sbjct: 91  AGGGPLHKFLVGKREEI--PVSNVAELLHQVSMGMKYLEEKNFVHR 134

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  113 bits (285), Expect = 3e-28
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 418 GLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWR-----GSIDVA--MMKE--GTMSEDD 468
            +          EL  L+ LGSG FG V +G W        I V   ++++  G  S   
Sbjct: 2   AMKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQA 61

Query: 469 FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
             +    +  L H ++V+L G+C     + +VT
Sbjct: 62  VTDHMLAIGSLDHAHIVRLLGLCPGS-SLQLVT 93

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 88.1 bits (219), Expect = 2e-19
 Identities = 20/51 (39%), Positives = 35/51 (68%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +++ +++ +SDVW+YGV +WE+ T G  PY  L+  EV D +++G  L +P
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP 239

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 78.1 bits (193), Expect = 5e-16
 Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           +  GSLL+++R+H   LG    LLL+  +Q+ KGM YLE H  +HR
Sbjct: 96  LPLGSLLDHVRQHRGALG--PQLLLNWGVQIAKGMYYLEEHGMVHR 139

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  112 bits (283), Expect = 8e-28
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 9/89 (10%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID------VA--MMKEGTMSE-DDFIEE 472
               I   +++L  ELG G FG V   +    +       VA   +KE + S   DF  E
Sbjct: 34  CVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQRE 93

Query: 473 AKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           A+++T LQHQ++V+ +GVC++ RP+ +V 
Sbjct: 94  AELLTMLQHQHIVRFFGVCTEGRPLLMVF 122

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 88.1 bits (219), Expect = 3e-19
 Identities = 24/52 (46%), Positives = 41/52 (78%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + Y +F+++SDVW++GV++WE+FT GK P+ +L NTE +D + +G  LE+P+
Sbjct: 232 ILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR 283

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 64.6 bits (158), Expect = 2e-11
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 12/58 (20%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL------------LLDMCIQVCKGMAYLERHNYIHR 46
           MRHG L  +LR H        G             LL +  QV  GM YL   +++HR
Sbjct: 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHR 182

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  111 bits (280), Expect = 2e-27
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 10/90 (11%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DFIE 471
           D  E+    + L+  LG G FG V  G+  G       + VA   + E    +D  DF+ 
Sbjct: 23  DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82

Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           EA ++++  HQN+V+  GV  +  P +I+ 
Sbjct: 83  EALIISKFNHQNIVRCIGVSLQSLPRFILM 112

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 85.8 bits (213), Expect = 1e-18
 Identities = 22/52 (42%), Positives = 33/52 (63%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
                F+SK+D W++GVL+WE+F+ G MPY    N EV++ V  G  ++ PK
Sbjct: 217 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 268

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 70.0 bits (172), Expect = 3e-13
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL----LLDMCIQVCKGMAYLERHNYIHR 46
           M  G L ++LR           L    LL +   +  G  YLE +++IHR
Sbjct: 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR 164

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  110 bits (278), Expect = 3e-27
 Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 10/92 (10%)

Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVA--MMKE-GTMSEDDFIE 471
             D    +   L  + +LG G FG V   ++          VA   ++  G   + DF  
Sbjct: 14  CQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 73

Query: 472 EAKVMTRLQHQNLVQLYGVC--SKHRPIYIVT 501
           E +++  L    +V+  GV      + + +V 
Sbjct: 74  EIQILKALHSDFIVKYRGVSYGPGRQSLRLVM 105

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 77.0 bits (190), Expect = 1e-15
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           +  G L ++L+RH   L      LL    Q+CKGM YL     +HR
Sbjct: 108 LPSGCLRDFLQRHRARLD--ASRLLLYSSQICKGMEYLGSRRCVHR 151

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 76.6 bits (189), Expect = 2e-15
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 14/67 (20%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPY--------------GRLKNTEVVDRVQRGI 249
           L+   FS +SDVW++GV+++E+FT                         + +++ ++ G 
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ 261

Query: 250 ILEKPKA 256
            L  P A
Sbjct: 262 RLPAPPA 268

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens} Length = 125

 Score =  105 bits (263), Expect = 4e-27
 Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 7/96 (7%)

Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           + KEG F+VR+SS  G YT+S++ K        ++HY +    + +++L+EKH   +IPE
Sbjct: 30  EGKEGGFIVRDSSKAGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPE 89

Query: 389 VVNYHRHNSGGLASRLKTSPC---DRPVPATAGLSH 421
           ++NYH+HNS GL SRLK  P    ++  P+T    H
Sbjct: 90  LINYHQHNSAGLISRLKY-PVSQQNKNAPSTHHHHH 124

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  110 bits (277), Expect = 4e-27
 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFIEEAKV 475
           S       P++L+  E LG G FG   +   R +   + M   ++    ++  F++E KV
Sbjct: 1   SMPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKV 60

Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVT 501
           M  L+H N+++  GV  K + +  +T
Sbjct: 61  MRCLEHPNVLKFIGVLYKDKRLNFIT 86

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 65.1 bits (159), Expect = 9e-12
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           ++ G+L   ++  ++         +     +  GMAYL   N IHR
Sbjct: 89  IKGGTLRGIIKSMDSQY--PWSQRVSFAKDIASGMAYLHSMNIIHR 132

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 10/46 (21%), Positives = 20/46 (43%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
           ++N   +  K DV+++G+++ E+          L  T       RG
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRG 238

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  109 bits (274), Expect = 5e-27
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)

Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSED---DFIEEAKVM 476
           + D WEI   ++ + + +GSG FG V +GKW G + V M+     +      F  E  V+
Sbjct: 15  AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74

Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
            + +H N++   G  +    + IVT
Sbjct: 75  RKTRHVNILLFMGYSTAP-QLAIVT 98

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 63.9 bits (156), Expect = 2e-11
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
               SL ++L   E      +  L+D+  Q  +GM YL   + IHR
Sbjct: 101 CEGSSLYHHLHASETKF--EMKKLIDIARQTARGMDYLHAKSIIHR 144

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 55.8 bits (135), Expect = 9e-09
 Identities = 17/52 (32%), Positives = 35/52 (67%), Gaps = 3/52 (5%)

Query: 198 ELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE-VVDRVQRG 248
           E+I    +   +S +SDV+A+G++++E+ T G++PY  + N + +++ V RG
Sbjct: 192 EVIRM-QDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIEMVGRG 241

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  109 bits (275), Expect = 8e-27
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 10/90 (11%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DFIE 471
            KWE     L+L + LG G+FG V +              VA  M+KE     +  D + 
Sbjct: 16  PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLS 75

Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           E  V+ ++ H ++++LYG CS+  P+ ++ 
Sbjct: 76  EFNVLKQVNHPHVIKLYGACSQDGPLLLIV 105

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 83.4 bits (207), Expect = 7e-18
 Identities = 17/52 (32%), Positives = 32/52 (61%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L    ++++SDVW++GVL+WE+ T G  PY  +    + + ++ G  +E+P 
Sbjct: 224 LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD 275

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 59.2 bits (144), Expect = 8e-10
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 21/67 (31%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL---------------------LLDMCIQVCKGMAYLE 39
            ++GSL  +LR       G +G                      L+    Q+ +GM YL 
Sbjct: 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167

Query: 40  RHNYIHR 46
               +HR
Sbjct: 168 EMKLVHR 174

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  113 bits (283), Expect = 1e-26
 Identities = 39/198 (19%), Positives = 79/198 (39%), Gaps = 22/198 (11%)

Query: 325 CHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKH----YHIKQNSRGEFFLS-- 378
            +S  E KD++G   ++ +      T++  +     ++      Y    N   + F+   
Sbjct: 273 QYSNSEDKDRKGMLQLKIAGAPEPLTVTAPSLTIAENMADLIDGYCRLVNGATQSFIIRP 332

Query: 379 EKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR-------PVPATAGLSHDKWEIDPAEL 431
           +K    ++P +     +   G+ S   +                    S   +EI    +
Sbjct: 333 QKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERI 392

Query: 432 MLLEELGSGQFGVVRRGKWR----GSIDVA--MMKEGTMSE--DDFIEEAKVMTRLQHQN 483
            L   +G GQFG V +G +      ++ VA    K  T     + F++EA  M +  H +
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 452

Query: 484 LVQLYGVCSKHRPIYIVT 501
           +V+L GV +++ P++I+ 
Sbjct: 453 IVKLIGVITEN-PVWIIM 469

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 86.1 bits (213), Expect = 6e-18
 Identities = 22/51 (43%), Positives = 33/51 (64%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           +N+ RF+S SDVW +GV MWE+   G  P+  +KN +V+ R++ G  L  P
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 614

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 73.0 bits (179), Expect = 8e-14
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
              G L ++L+  + +L  ++  L+    Q+   +AYLE   ++HR
Sbjct: 472 CTLGELRSFLQVRKFSL--DLASLILYAYQLSTALAYLESKRFVHR 515

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  108 bits (271), Expect = 2e-26
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 10/88 (11%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DFIEEA 473
            EI  + +  +EELG  +FG V +G   G      +  VA   +K+        +F  EA
Sbjct: 4   KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63

Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
            +  RLQH N+V L GV +K +P+ ++ 
Sbjct: 64  MLRARLQHPNVVCLLGVVTKDQPLSMIF 91

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 85.0 bits (211), Expect = 1e-18
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + Y +FS  SD+W+YGV++WEVF+ G  PY    N +VV+ ++   +L  P
Sbjct: 202 IMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCP 252

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 63.0 bits (154), Expect = 4e-11
 Identities = 11/59 (18%), Positives = 18/59 (30%), Gaps = 13/59 (22%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL-------------LLDMCIQVCKGMAYLERHNYIHR 46
             HG L  +L                           + +  Q+  GM YL  H+ +H+
Sbjct: 94  CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHK 152

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  108 bits (273), Expect = 2e-26
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 10/85 (11%)

Query: 426 IDPAELMLLEELGSGQFGVVRRGKW-----RGSIDVA--MMKEGTM--SEDDFIEEAKVM 476
           +   E   ++ LGSG FG V +G W     +  I VA   ++E T   +  + ++EA VM
Sbjct: 12  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71

Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
             + + ++ +L G+C     + ++T
Sbjct: 72  ASVDNPHVCRLLGICLTS-TVQLIT 95

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 90.8 bits (226), Expect = 3e-20
 Identities = 17/51 (33%), Positives = 32/51 (62%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + +  ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 79.2 bits (196), Expect = 2e-16
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR
Sbjct: 98  MPFGCLLDYVREHKDNIG--SQYLLNWCVQIAKGMNYLEDRRLVHR 141

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 110

 Score =  102 bits (256), Expect = 2e-26
 Identities = 34/77 (44%), Positives = 54/77 (70%), Gaps = 3/77 (3%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNS 313
           W+ G++SR ++E +L+Q+ KEG F+VRNSS  G+YT+SL++K        VKHYH+  N+
Sbjct: 13  WFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHTNA 72

Query: 314 RGEFFLSEKHCCHSIPE 330
             + +L+E +C  SIP+
Sbjct: 73  ENKLYLAENYCFDSIPK 89

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 110

 Score = 99.2 bits (248), Expect = 3e-25
 Identities = 37/81 (45%), Positives = 56/81 (69%), Gaps = 4/81 (4%)

Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           K KEG F+VRNSS  G+YT+SL++K        VKHYH+  N+  + +L+E +C  SIP+
Sbjct: 30  KGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPK 89

Query: 389 VVNYHRHNSGGLASRLKTSPC 409
           +++YH+HNS G+ +RL+  P 
Sbjct: 90  LIHYHQHNSAGMITRLRH-PV 109

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 85

 Score =  101 bits (253), Expect = 3e-26
 Identities = 28/74 (37%), Positives = 48/74 (64%)

Query: 117 RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
           R+P       VV+ALY ++  +  +L+L +  EY ++D ++ HWW+V+D+NG  GY+PS+
Sbjct: 11  RRPLWEPEETVVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSS 70

Query: 177 YVKEKELLGLQKYD 190
           Y+ EK    L+ Y+
Sbjct: 71  YLVEKSPNNLETYE 84

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 85

 Score = 67.4 bits (165), Expect = 2e-14
 Identities = 18/50 (36%), Positives = 32/50 (64%)

Query: 66  PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           P       VV+ALY ++  +  +L+L +  EY ++D ++ HWW+V+D+NG
Sbjct: 13  PLWEPEETVVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWWRVQDRNG 62

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  106 bits (268), Expect = 6e-26
 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 11/91 (12%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DFIE 471
            KWE     L   + LG+G FG V      G      ++ VA  M+K      +    + 
Sbjct: 16  HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 75

Query: 472 EAKVMTRL-QHQNLVQLYGVCSKHRPIYIVT 501
           E KV++ L  H N+V L G C+   P  ++T
Sbjct: 76  ELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 81.9 bits (203), Expect = 2e-17
 Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
           +    ++ +SDVW+YG+ +WE+F+ G  PY G   +++    ++ G  +  P+
Sbjct: 219 IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 271

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 63.0 bits (154), Expect = 4e-11
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 15/61 (24%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL---------------LLDMCIQVCKGMAYLERHNYIH 45
             +G LLN+LRR  ++   +                  LL    QV KGMA+L   N IH
Sbjct: 109 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIH 168

Query: 46  R 46
           R
Sbjct: 169 R 169

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  106 bits (268), Expect = 9e-26
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRG------KWRGSIDVA--MMKEGTMSED--DFI 470
           ++KWE     L   + LG+G FG V         K    + VA  M+K    +++    +
Sbjct: 38  NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97

Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVT 501
            E K+M+ L QH+N+V L G C+   P+ ++T
Sbjct: 98  SELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 81.9 bits (203), Expect = 3e-17
 Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
           +    ++ +SDVW+YG+L+WE+F+ G  PY G L N++    V+ G  + +P 
Sbjct: 238 IFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA 290

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 65.4 bits (160), Expect = 8e-12
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 11/57 (19%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL-----------LLDMCIQVCKGMAYLERHNYIHR 46
             +G LLN+LRR    L  +              LL    QV +GMA+L   N IHR
Sbjct: 132 CCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHR 188

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  105 bits (265), Expect = 2e-25
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 17/105 (16%)

Query: 407 SPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--M 458
           S  D  VP       D+WE+   ++ +  ELG G FG+V  G  +G         VA   
Sbjct: 10  SAADVYVP-------DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 62

Query: 459 MKEGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           + E     +  +F+ EA VM      ++V+L GV S+ +P  ++ 
Sbjct: 63  VNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 107

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 83.1 bits (206), Expect = 1e-17
 Identities = 21/52 (40%), Positives = 33/52 (63%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L    F++ SDVW++GV++WE+ T  + PY  L N +V+  V  G +L+KP 
Sbjct: 212 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 263

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 65.4 bits (160), Expect = 7e-12
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 7/53 (13%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL-------LLDMCIQVCKGMAYLERHNYIHR 46
           M  G L +YLR     +  N  L       ++ M  ++  GMAYL  + ++HR
Sbjct: 110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 162

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  105 bits (265), Expect = 2e-25
 Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 23/125 (18%)

Query: 391 NYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKW 450
           ++H H+S GL  R      ++          +   ID   L+L + LG G+FG V  G  
Sbjct: 5   HHHHHHSSGLVPRGSEELQNKL---------EDVVIDRNLLILGKILGEGEFGSVMEGNL 55

Query: 451 RG----SIDVA--MMKEGTMSED---DFIEEAKVMTRLQHQNLVQLYGVCSKHRPI---- 497
           +     S+ VA   MK    S+    +F+ EA  M    H N+++L GVC +        
Sbjct: 56  KQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK 115

Query: 498 -YIVT 501
             ++ 
Sbjct: 116 PMVIL 120

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 85.0 bits (211), Expect = 2e-18
 Identities = 23/52 (44%), Positives = 34/52 (65%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L    ++SKSDVWA+GV MWE+ T G  PY  ++N E+ D +  G  L++P+
Sbjct: 221 LADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPE 272

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 67.3 bits (165), Expect = 2e-12
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 1   MRHGSLLNYLRRHENTLGGN---VGLLLDMCIQVCKGMAYLERHNYIHR 46
           M++G L  YL       G     +  LL   + +  GM YL   N++HR
Sbjct: 123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHR 171

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  105 bits (265), Expect = 2e-25
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 8/89 (8%)

Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVA--MMKEGTMSED--DFIEEA 473
                +D  ++   + +G G FG V + + +     +D A   MKE    +D  DF  E 
Sbjct: 17  TIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGEL 76

Query: 474 KVMTRL-QHQNLVQLYGVCSKHRPIYIVT 501
           +V+ +L  H N++ L G C     +Y+  
Sbjct: 77  EVLCKLGHHPNIINLLGACEHRGYLYLAI 105

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 86.9 bits (216), Expect = 6e-19
 Identities = 22/51 (43%), Positives = 36/51 (70%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           LNY+ +++ SDVW+YGVL+WE+ + G  PY  +   E+ +++ +G  LEKP
Sbjct: 213 LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 263

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 62.7 bits (153), Expect = 7e-11
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 13/59 (22%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL-------------LLDMCIQVCKGMAYLERHNYIHR 46
             HG+LL++LR+                        LL     V +GM YL +  +IHR
Sbjct: 108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHR 166

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  104 bits (262), Expect = 2e-25
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 8/85 (9%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA-------MMKEGTMSEDDFIEEAKVM 476
            EID AEL L E +G G FG V R  W G  +VA         ++ + + ++  +EAK+ 
Sbjct: 2   LEIDFAELTLEEIIGIGGFGKVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLF 60

Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
             L+H N++ L GVC K   + +V 
Sbjct: 61  AMLKHPNIIALRGVCLKEPNLCLVM 85

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRV-QRGIILEKPK 255
           V+  + FS  SDVW+YGVL+WE+ T G++P+  +    V   V    + L  P 
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLT-GEVPFRGIDGLAVAYGVAMNKLALPIPS 237

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 7/49 (14%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNY---IHR 46
            R G L   L            +L++  +Q+ +GM YL        IHR
Sbjct: 88  ARGGPLNRVLSGKRIPPD----ILVNWAVQIARGMNYLHDEAIVPIIHR 132

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  105 bits (265), Expect = 2e-25
 Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 11/92 (11%)

Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DFI 470
             KWE     L   + LGSG FG V      G      SI VA  M+KE   S +    +
Sbjct: 37  DLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALM 96

Query: 471 EEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVT 501
            E K+MT+L  H+N+V L G C+   PIY++ 
Sbjct: 97  SELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 80.0 bits (198), Expect = 1e-16
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
           L    ++ KSDVW+YG+L+WE+F+ G  PY G   +      +Q G  +++P 
Sbjct: 246 LFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPF 298

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 60.0 bits (146), Expect = 5e-10
 Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 20/66 (30%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL--------------------LLDMCIQVCKGMAYLER 40
             +G LLNYLR        +                       LL    QV KGM +LE 
Sbjct: 131 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF 190

Query: 41  HNYIHR 46
            + +HR
Sbjct: 191 KSCVHR 196

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  104 bits (262), Expect = 3e-25
 Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 11/91 (12%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVA--MMKE--GTMSEDDFIEE 472
           D    +   L  + +LG G FG V   ++          VA   +K   G     D  +E
Sbjct: 14  DPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKE 73

Query: 473 AKVMTRLQHQNLVQLYGVCSKH--RPIYIVT 501
            +++  L H+N+V+  G+C++     I ++ 
Sbjct: 74  IEILRNLYHENIVKYKGICTEDGGNGIKLIM 104

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 76.6 bits (189), Expect = 1e-15
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 14/65 (21%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKM--------------PYGRLKNTEVVDRVQRGI 249
           L  ++F   SDVW++GV + E+ T                   +G++  T +V+ ++ G 
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 260

Query: 250 ILEKP 254
            L  P
Sbjct: 261 RLPCP 265

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 76.2 bits (188), Expect = 2e-15
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           +  GSL  YL +++N +  N+   L   +Q+CKGM YL    Y+HR
Sbjct: 107 LPSGSLKEYLPKNKNKI--NLKQQLKYAVQICKGMDYLGSRQYVHR 150

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A Length = 112

 Score = 99.2 bits (248), Expect = 3e-25
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
             G F+VR S S+ G  ++SL  +     V HY I   S G+ ++S +   +++ E+V++
Sbjct: 25  INGSFLVRESESSPGQRSISLRYE---GRVYHYRINTASDGKLYVSSESRFNTLAELVHH 81

Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSHD 422
           H   + GL + L      R  P   G+S +
Sbjct: 82  HSTVADGLITTLHYPAPKRNKPTVYGVSPN 111

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  104 bits (262), Expect = 5e-25
 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 19/107 (17%)

Query: 414 PATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVA-- 457
           P  AG+S        KWE    +L L + LG G FG V   +  G        ++ VA  
Sbjct: 14  PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73

Query: 458 MMKEGTMSED--DFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVT 501
           M+K+    +D  D + E ++M  + +H+N++ L G C++  P+Y++ 
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 120

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 81.6 bits (202), Expect = 4e-17
 Identities = 20/52 (38%), Positives = 32/52 (61%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L    ++ +SDVW++GVLMWE+FT G  PY  +   E+   ++ G  ++KP 
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 60.8 bits (148), Expect = 3e-10
 Identities = 14/59 (23%), Positives = 18/59 (30%), Gaps = 13/59 (22%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL-------------LLDMCIQVCKGMAYLERHNYIHR 46
              G+L  YLR                         L+    Q+ +GM YL     IHR
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR 181

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 125

 Score = 98.9 bits (247), Expect = 5e-25
 Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 7/92 (7%)

Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           + KEG F+VR+S   G YT+S++          +KHY IK+N  G+++++E+H   SIPE
Sbjct: 35  ESKEGAFIVRDSRHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHAFQSIPE 94

Query: 389 VVNYHRHNSGGLASRLKTSPCDRP---VPATA 417
           ++ YH+HN+ GL +RL+  P        P++ 
Sbjct: 95  LIWYHQHNAAGLMTRLRY-PVGLMGSSGPSSG 125

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 125

 Score = 98.9 bits (247), Expect = 6e-25
 Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 3/77 (3%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNS 313
           WY  +++R +AE +L+QE KEG F+VR+S   G YT+S++          +KHY IK+N 
Sbjct: 18  WYHRNITRNQAEHLLRQESKEGAFIVRDSRHLGSYTISVFMGARRSTEAAIKHYQIKKND 77

Query: 314 RGEFFLSEKHCCHSIPE 330
            G+++++E+H   SIPE
Sbjct: 78  SGQWYVAERHAFQSIPE 94

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1 Length = 67

 Score = 95.8 bits (239), Expect = 2e-24
 Identities = 33/65 (50%), Positives = 45/65 (69%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLG 185
           ++VVA+Y F+A E  DL LE+G EY +++    HWW+ +DK GS GYIPSNYV  K+   
Sbjct: 3   EIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKKSNN 62

Query: 186 LQKYD 190
           L +YD
Sbjct: 63  LDQYD 67

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1 Length = 67

 Score = 65.0 bits (159), Expect = 1e-13
 Identities = 20/43 (46%), Positives = 30/43 (69%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           ++VVA+Y F+A E  DL LE+G EY +++    HWW+ +DK G
Sbjct: 3   EIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYG 45

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B Length = 118

 Score = 97.0 bits (242), Expect = 2e-24
 Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 5/88 (5%)

Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTK---VPHPHVKHYHIKQ--NSRGEFFLSEKHCCHSI 386
             KEG F+VR+S T G YT+S++TK     +P +KHYHIK+  +S   ++++EK+   SI
Sbjct: 28  TGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSI 87

Query: 387 PEVVNYHRHNSGGLASRLKTSPCDRPVP 414
           P ++ YH++N GGL +RL+   C  P  
Sbjct: 88  PLLIQYHQYNGGGLVTRLRYPVCGSPGI 115

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B Length = 118

 Score = 94.7 bits (236), Expect = 1e-23
 Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 5/79 (6%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTK---VPHPHVKHYHIKQ-- 311
           WY   +SR +AE +L    KEG F+VR+S T G YT+S++TK     +P +KHYHIK+  
Sbjct: 11  WYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETN 70

Query: 312 NSRGEFFLSEKHCCHSIPE 330
           +S   ++++EK+   SIP 
Sbjct: 71  DSPKRYYVAEKYVFDSIPL 89

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  102 bits (255), Expect = 3e-24
 Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 10/118 (8%)

Query: 389 VVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG 448
           + ++H H+           P    +     +  D  +I   +L + E++G+G FG V R 
Sbjct: 1   MKHHHHHHP----MSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRA 56

Query: 449 KWRGSIDVA--MMKEGTMSED---DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           +W GS DVA  ++ E     +   +F+ E  +M RL+H N+V   G  ++   + IVT
Sbjct: 57  EWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRV 245
           VL     + KSDV+++GV++WE+ T  + P+G L   +VV  V
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELAT-LQQPWGNLNPAQVVAAV 251

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 2/48 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNY--IHR 46
           +  GSL   L +       +    L M   V KGM YL   N   +HR
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHR 163

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  102 bits (256), Expect = 3e-24
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 10/85 (11%)

Query: 426 IDPAELMLLEELGSGQFGVVRRGKW-----RGSIDVA--MMKEGTM--SEDDFIEEAKVM 476
           +   E   ++ LGSG FG V +G W     +  I VA   ++E T   +  + ++EA VM
Sbjct: 12  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71

Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVT 501
             + + ++ +L G+C     + ++T
Sbjct: 72  ASVDNPHVCRLLGICLTS-TVQLIT 95

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 87.0 bits (216), Expect = 6e-19
 Identities = 17/51 (33%), Positives = 32/51 (62%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           + +  ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 76.2 bits (188), Expect = 2e-15
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M  G LL+Y+R H++ +G     LL+ C+Q+ KGM YLE    +HR
Sbjct: 98  MPFGCLLDYVREHKDNIG--SQYLLNWCVQIAKGMNYLEDRRLVHR 141

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  101 bits (254), Expect = 5e-24
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 12/92 (13%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG------SIDVA--MMKEGTMSED--DFIE 471
            KWE     L L + LG G FG V      G         VA  M+KEG    +    + 
Sbjct: 20  SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 79

Query: 472 EAKVMTRL-QHQNLVQLYGVCSKH-RPIYIVT 501
           E K++  +  H N+V L G C+K   P+ ++ 
Sbjct: 80  ELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 80.4 bits (199), Expect = 8e-17
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKP 254
           +    ++ +SDVW++GVL+WE+F+ G  PY G   + E   R++ G  +  P
Sbjct: 222 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 62.3 bits (152), Expect = 8e-11
 Identities = 16/59 (27%), Positives = 20/59 (33%), Gaps = 13/59 (22%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL-------------LLDMCIQVCKGMAYLERHNYIHR 46
            + G+L  YLR   N                     L+    QV KGM +L     IHR
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 172

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  101 bits (253), Expect = 6e-24
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 7/103 (6%)

Query: 404 LKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKE 461
           L ++       +   +   +W+I   +L + E +G G+FG V  G+W G  +VA  ++  
Sbjct: 8   LLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDI 65

Query: 462 GTMSED---DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
              +ED    F  E     + +H+N+V   G C     + I+T
Sbjct: 66  ERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
            +  +L + +R  +  L  +V     +  ++ KGM YL     +H+
Sbjct: 111 CKGRTLYSVVRDAKIVL--DVNKTRQIAQEIVKGMGYLHAKGILHK 154

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 53.5 bits (129), Expect = 6e-08
 Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 209 FSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
           FS  SDV+A G + +E+    + P+       ++ ++  G+     +  
Sbjct: 220 FSKHSDVFALGTIWYELHA-REWPFKTQPAEAIIWQMGTGMKPNLSQIG 267

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A Length = 67

 Score = 93.8 bits (234), Expect = 7e-24
 Identities = 29/57 (50%), Positives = 38/57 (66%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
           K VVALY +  +   DL L KG EY +++++   WW+ +DKNG  GYIPSNYV E E
Sbjct: 9   KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE 65

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A Length = 67

 Score = 67.6 bits (166), Expect = 1e-14
 Identities = 19/43 (44%), Positives = 28/43 (65%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           K VVALY +  +   DL L KG EY +++++   WW+ +DKNG
Sbjct: 9   KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNG 51

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A Length = 77

 Score = 94.0 bits (234), Expect = 7e-24
 Identities = 26/65 (40%), Positives = 42/65 (64%)

Query: 117 RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
           R+  Q     +V+ALY ++  +  +L+L    EY ++D ++ HWW+V+DKNG  GY PS+
Sbjct: 12  RRSFQEPEETLVIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSS 71

Query: 177 YVKEK 181
           Y+ EK
Sbjct: 72  YLVEK 76

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A Length = 77

 Score = 66.2 bits (162), Expect = 5e-14
 Identities = 18/50 (36%), Positives = 31/50 (62%)

Query: 66  PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
             Q     +V+ALY ++  +  +L+L    EY ++D ++ HWW+V+DKNG
Sbjct: 14  SFQEPEETLVIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNG 63

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 94.3 bits (235), Expect = 2e-23
 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 8/88 (9%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
             G F+VR S S+ G  ++SL  +     V HY I   + G+ +++ +    ++ E+V++
Sbjct: 36  INGSFLVRESESSPGQLSISLRYE---GRVYHYRINTTADGKVYVTAESRFSTLAELVHH 92

Query: 393 HRHNSGGLASRLKTSPC---DRPVPATA 417
           H   + GL + L   P    ++  P++ 
Sbjct: 93  HSTVADGLVTTLHY-PAPKCNKSGPSSG 119

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 88.5 bits (220), Expect = 2e-21
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 5/75 (6%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           WY G +SR  AE +L      G F+VR S S+ G  ++SL  +     V HY I   + G
Sbjct: 18  WYHGPVSRSAAEYLLSSL-INGSFLVRESESSPGQLSISLRYE---GRVYHYRINTTADG 73

Query: 316 EFFLSEKHCCHSIPE 330
           + +++ +    ++ E
Sbjct: 74  KVYVTAESRFSTLAE 88

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 119

 Score = 93.9 bits (234), Expect = 2e-23
 Identities = 25/162 (15%), Positives = 47/162 (29%), Gaps = 58/162 (35%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           W  G+++R +AE +L +  K+G F+VR S S    Y L +  +     V  Y I  N   
Sbjct: 12  WNHGNITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYR---NCVYTYRILPNEDD 68

Query: 316 EFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEF 375
           +F +                                                        
Sbjct: 69  KFTVQASEGVS------------------------------------------------- 79

Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATA 417
                     + +++ +++  + GL + L+  P       T 
Sbjct: 80  ----MRFFTKLDQLIEFYKKENMGLVTHLQY-PVPLEEEDTG 116

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F* Length = 106

 Score = 92.7 bits (231), Expect = 4e-23
 Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 333 DKEGCFVVRNS-STKGLYTLSLYTKVP--HPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV 389
           +  G F++R S +TKG Y+LS+         HVKHY I++   G ++++ +    ++ ++
Sbjct: 26  NPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQL 85

Query: 390 VNYHRHNSGGLASRLKTSPCDR 411
           V ++   + GL+SRL   P  +
Sbjct: 86  VQHYSERAAGLSSRL-VVPSHK 106

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F* Length = 106

 Score = 86.5 bits (215), Expect = 7e-21
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 4/78 (5%)

Query: 257 WYVGDMSRQRAESILKQ-EDKEGCFVVRNS-STKGLYTLSLYTKVP--HPHVKHYHIKQN 312
           WY G + R+ AE  L    +  G F++R S +TKG Y+LS+         HVKHY I++ 
Sbjct: 7   WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 66

Query: 313 SRGEFFLSEKHCCHSIPE 330
             G ++++ +    ++ +
Sbjct: 67  DNGGYYITTRAQFETLQQ 84

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 99.5 bits (247), Expect = 5e-23
 Identities = 34/183 (18%), Positives = 70/183 (38%), Gaps = 22/183 (12%)

Query: 334 KEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN 391
            +G F+VR++STK  G YTL+L       + K   I     G++  S+     S+ E++N
Sbjct: 30  ADGTFLVRDASTKMHGDYTLTLRKGG---NNKLIKIFH-RDGKYGFSDPLTFSSVVELIN 85

Query: 392 YHRHNS-----GGLASRLKTSPCDR----PVPATAGLSHDKWEIDPAELMLLEELGSGQF 442
           ++R+ S       L  +L   P  +     V     +     ++   E     +  S ++
Sbjct: 86  HYRNESLAQYNPKLDVKLLY-PVSKYQQDQVVKEDNIEAVGKKLH--EYNTQFQEKSREY 142

Query: 443 GVVRRGKWRGSIDVAMMKE----GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIY 498
             +     R S ++ M +        +   F E+ +   R   + + +     ++     
Sbjct: 143 DRLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQTQERYSKEYIEKFKREGNEKEIQR 202

Query: 499 IVT 501
           I+ 
Sbjct: 203 IMH 205

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 80.3 bits (197), Expect = 1e-16
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)

Query: 254 PKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNS 313
            K W VG  +R +AE++L+ + ++G F+VR SS +G Y  S+   V    VKH  I + +
Sbjct: 300 EKTWNVGSSNRNKAENLLRGK-RDGTFLVRESSKQGCYACSV---VVDGEVKHCVINKTA 355

Query: 314 RGEFFLSEKHCCHSIPE 330
            G  F    +   S+ E
Sbjct: 356 TGYGFAEPYNLYSSLKE 372

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 58.7 bits (141), Expect = 2e-09
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
           ++G F+VR SS +G Y  S+   V    VKH  I + + G  F    +   S+ E
Sbjct: 321 RDGTFLVRESSKQGCYACSV---VVDGEVKHCVINKTATGYGFAEPYNLYSSLKE 372

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 98.6 bits (246), Expect = 5e-23
 Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 21/110 (19%)

Query: 413 VPATAGLSH------DKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVA--MMK 460
           +  + G+S       +   I   +  L   LG G+FG VR  + +      + VA  M+K
Sbjct: 1   MLDSLGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK 60

Query: 461 EGTMSED---DFIEEAKVMTRLQHQNLVQLYGVCSKHRP------IYIVT 501
              ++     +F+ EA  M    H ++ +L GV  + R         ++ 
Sbjct: 61  ADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVIL 110

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 84.3 bits (209), Expect = 5e-18
 Identities = 20/52 (38%), Positives = 32/52 (61%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           L    ++  SDVWA+GV MWE+ T G+ PY  ++N E+ + +  G  L++P 
Sbjct: 211 LADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPP 262

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 65.0 bits (159), Expect = 9e-12
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 1   MRHGSLLNYLRRH---ENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M+HG L  +L      EN     +  L+   + +  GM YL   N+IHR
Sbjct: 113 MKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHR 161

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A* Length = 105

 Score = 90.8 bits (226), Expect = 3e-22
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYT--KVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
             G F++R S ST G ++LS+    +     VKHY I+    G F++S +     + E+V
Sbjct: 26  THGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELV 85

Query: 391 NYHRHNSGGLASRLKTSPC 409
            ++ + S GL +RL + PC
Sbjct: 86  RHYTNASDGLCTRL-SRPC 103

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A* Length = 105

 Score = 86.2 bits (214), Expect = 9e-21
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)

Query: 257 WYVGDMSRQRAESILKQ-EDKEGCFVVRNS-STKGLYTLSLYT--KVPHPHVKHYHIKQN 312
           W+  ++SR+ AE  L    +  G F++R S ST G ++LS+    +     VKHY I+  
Sbjct: 6   WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 65

Query: 313 SRGEFFLSEKHCCHSIPE 330
             G F++S +     + E
Sbjct: 66  DNGGFYISPRITFPGLHE 83

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 121

 Score = 91.2 bits (227), Expect = 3e-22
 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%)

Query: 333 DKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN 391
           ++ G F++R S S KG ++LS+  +     VKHY I++   G FFL+ +    ++ E VN
Sbjct: 37  NQTGAFLIRESESQKGDFSLSVLDE---GVVKHYRIRRLDEGGFFLTRRKVFSTLNEFVN 93

Query: 392 YHRHNSGGLASRLKTSPCDRPVPAT 416
           Y+   S GL  +L   PC +   + 
Sbjct: 94  YYTTTSDGLCVKL-EKPCLKIQVSG 117

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 121

 Score = 84.6 bits (210), Expect = 6e-20
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 5/76 (6%)

Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           W+ G + R  AE  L   E++ G F++R S S KG ++LS+  +     VKHY I++   
Sbjct: 18  WFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDE---GVVKHYRIRRLDE 74

Query: 315 GEFFLSEKHCCHSIPE 330
           G FFL+ +    ++ E
Sbjct: 75  GGFFLTRRKVFSTLNE 90

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A Length = 67

 Score = 89.2 bits (222), Expect = 3e-22
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 122 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
           M    +V+A + + A +  +L ++K     ++DD+ + WW+V++     GY+PSNYV+ K
Sbjct: 1   MTEEVIVIAKWDYTAQQDQELDIKKNERLWLLDDS-KTWWRVRNAANRTGYVPSNYVERK 59

Query: 182 ELLGLQKY 189
                  +
Sbjct: 60  LEHHHHHH 67

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A Length = 67

 Score = 62.3 bits (152), Expect = 9e-13
 Identities = 11/47 (23%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 69  MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           M    +V+A + + A +  +L ++K     ++DD+ + WW+V++   
Sbjct: 1   MTEEVIVIAKWDYTAQQDQELDIKKNERLWLLDDS-KTWWRVRNAAN 46

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A Length = 128

 Score = 91.3 bits (227), Expect = 3e-22
 Identities = 22/177 (12%), Positives = 49/177 (27%), Gaps = 62/177 (35%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
            Y G +SR+  E +L     +G +++R+S S  G+Y L +       ++  Y + Q   G
Sbjct: 6   VYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYH---GYIYTYRVSQTETG 62

Query: 316 EFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEF 375
            +                                                         +
Sbjct: 63  SWSAET----------------------------------------------APGVHKRY 76

Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSH----DKWEIDP 428
           F         I  +++  +    G+   L+  P ++   A +        +  ++  
Sbjct: 77  F-------RKIKNLISAFQKPDQGIVIPLQY-PVEKKSSARSTQGTTGIREDPDVCL 125

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens} Length = 86

 Score = 89.5 bits (222), Expect = 4e-22
 Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 118 KPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNY 177
           K   M    +V+A + + A +  +L ++K     ++DD+ + WW+V++     GY+PSNY
Sbjct: 24  KNLHMTEEVIVIAKWDYTAQQDQELDIKKNERLWLLDDS-KTWWRVRNAANRTGYVPSNY 82

Query: 178 VKEK 181
           V+ K
Sbjct: 83  VERK 86

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens} Length = 86

 Score = 65.2 bits (159), Expect = 1e-13
 Identities = 13/74 (17%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 45  HRETKKSLYPS---SLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMD 101
           H + +    P+   +  +   ++    M    +V+A + + A +  +L ++K     ++D
Sbjct: 1   HMKERPPPVPNPDYNSLKKGSLVKNLHMTEEVIVIAKWDYTAQQDQELDIKKNERLWLLD 60

Query: 102 DTQEHWWKVKDKNG 115
           D+ + WW+V++   
Sbjct: 61  DS-KTWWRVRNAAN 73

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A Length = 114

 Score = 90.5 bits (225), Expect = 4e-22
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%)

Query: 333 DKEGCFVVRNS-STKGLYTLSLYTKVPH-PHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
           +K G F++R S S KG ++LS+         VKHY I+    G +++S +    ++  +V
Sbjct: 33  NKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALV 92

Query: 391 NYHRHNSGGLASRLKTSPCDRP 412
            ++     GL  +L T PC   
Sbjct: 93  QHYSKKGDGLCQKL-TLPCVNL 113

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A Length = 114

 Score = 84.3 bits (209), Expect = 5e-20
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)

Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSLYTKVPH-PHVKHYHIKQNS 313
           W+   +SR+ AE  L    +K G F++R S S KG ++LS+         VKHY I+   
Sbjct: 14  WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLD 73

Query: 314 RGEFFLSEKHCCHSIPE 330
            G +++S +    ++  
Sbjct: 74  NGGYYISPRITFPTLQA 90

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 100

 Score = 89.5 bits (223), Expect = 5e-22
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 5/80 (6%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
             G F++R S      Y LS+        V+HY I + + G   L+E     S+PE+VNY
Sbjct: 24  ATGAFLIRVSEKPSADYVLSVRDT---QAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNY 80

Query: 393 HRHNSGGLASRLKTSPCDRP 412
           HR  S     RL  +PC + 
Sbjct: 81  HRAQSLSHGLRL-AAPCRKH 99

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 100

 Score = 84.5 bits (210), Expect = 4e-20
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 257 WYVGDMSRQRAESILKQED-KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           W+ G +SR  A   L+ E    G F++R S      Y LS+        V+HY I + + 
Sbjct: 4   WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDT---QAVRHYKIWRRAG 60

Query: 315 GEFFLSEKHCCHSIPE 330
           G   L+E     S+PE
Sbjct: 61  GRLHLNEAVSFLSLPE 76

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A Length = 112

 Score = 90.1 bits (224), Expect = 5e-22
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 316
           W VG  +R +AE++L+ + ++G F+VR SS +G Y  S+        VKH  I + + G 
Sbjct: 12  WNVGSSNRNKAENLLRGK-RDGTFLVRESSKQGCYACSVVVD---GEVKHCVINKTATGY 67

Query: 317 FFLSEKHCCHSIPE 330
            F    +   S+ E
Sbjct: 68  GFAEPYNLYSSLKE 81

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A Length = 112

 Score = 85.0 bits (211), Expect = 3e-20
 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 9/84 (10%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
           ++G F+VR SS +G Y  S+        VKH  I + + G  F    +   S+ E+V ++
Sbjct: 30  RDGTFLVRESSKQGCYACSVVVD---GEVKHCVINKTATGYGFAEPYNLYSSLKELVLHY 86

Query: 394 RHNS-----GGLASRLKTSPCDRP 412
           +H S       L   L   P    
Sbjct: 87  QHTSLVQHNDSLNVTLAY-PVYAQ 109

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens} Length = 125

 Score = 90.3 bits (224), Expect = 6e-22
 Identities = 15/81 (18%), Positives = 34/81 (41%), Gaps = 1/81 (1%)

Query: 252 EKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQ 311
             P       +SR+ A  +L++    G  ++R  S    Y++++  ++  P +KHY +  
Sbjct: 12  LNPMPACFYTVSRKEATEMLQKNPSLGNMILRPGSDSRNYSITIRQEIDIPRIKHYKVMS 71

Query: 312 NSRGE-FFLSEKHCCHSIPEV 331
             +     L +     ++  V
Sbjct: 72  VGQNYTIELEKPVTLPNLFSV 92

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens} Length = 125

 Score = 86.0 bits (213), Expect = 2e-20
 Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 3/90 (3%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE-FFLSEKHCCHSIPEVVNY 392
             G  ++R  S    Y++++  ++  P +KHY +    +     L +     ++  V++Y
Sbjct: 36  SLGNMILRPGSDSRNYSITIRQEIDIPRIKHYKVMSVGQNYTIELEKPVTLPNLFSVIDY 95

Query: 393 HRHNSGGLASRL--KTSPCDRPVPATAGLS 420
               + G        T       P+  G S
Sbjct: 96  FVKETRGNLRPFIASTDENTGQEPSMEGRS 125

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus} Length = 124

 Score = 90.0 bits (224), Expect = 6e-22
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 243 DRVQRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHP 302
           D V      E  K WY   +SR  AE +L +  ++G F++R       Y ++   +    
Sbjct: 8   DPVPNPNPHES-KPWYYDRLSRGEAEDMLMRIPRDGAFLIRKREGTDSYAITFRARG--- 63

Query: 303 HVKHYHIKQNSRGEFFLSEKHCCHSIPE 330
            VKH  I ++ R  F L       S+ E
Sbjct: 64  KVKHCRINRDGRH-FVLGTSAYFESLVE 90

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus} Length = 124

 Score = 85.4 bits (212), Expect = 3e-20
 Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 12/95 (12%)

Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN 391
             ++G F++R       Y ++   +     VKH  I ++ R  F L       S+ E+V+
Sbjct: 38  IPRDGAFLIRKREGTDSYAITFRARG---KVKHCRINRDGRH-FVLGTSAYFESLVELVS 93

Query: 392 YHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEI 426
           Y+  ++     RL+      PV        +++  
Sbjct: 94  YYEKHALYRKMRLR-----YPVTPE---LLERYSG 120

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens} Length = 72

 Score = 87.7 bits (218), Expect = 1e-21
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
            VVVA + + A +  +L ++K     ++DD+ + WW+V++     G++PSNYV+ K 
Sbjct: 8   VVVVAKFDYVAQQEQELDIKKNERLWLLDDS-KSWWRVRNSMNKTGFVPSNYVERKN 63

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens} Length = 72

 Score = 62.3 bits (152), Expect = 1e-12
 Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
            VVVA + + A +  +L ++K     ++DD+ + WW+V++   
Sbjct: 8   VVVVAKFDYVAQQEQELDIKKNERLWLLDDS-KSWWRVRNSMN 49

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A* Length = 104

 Score = 85.8 bits (213), Expect = 1e-20
 Identities = 22/156 (14%), Positives = 44/156 (28%), Gaps = 58/156 (37%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
            Y G +SR+  E +L     +G +++R+S S  G+Y L +       ++  Y + Q   G
Sbjct: 6   VYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYH---GYIYTYRVSQTETG 62

Query: 316 EFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEF 375
            +        H                                                 
Sbjct: 63  SWSAETAPGVH------------------------------------------------- 73

Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR 411
               K     I  +++  +    G+   L+  P ++
Sbjct: 74  ----KRYFRKIKNLISAFQKPDQGIVIPLQY-PVEK 104

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 90.8 bits (226), Expect = 2e-20
 Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 11/91 (12%)

Query: 422 DKWEI--DPAELMLLEELGSGQFGVVRRGKWRG----SIDVA--MMKEGT--MSEDDFIE 471
               I  +         +G G FGVV  G++       I  A   +   T     + F+ 
Sbjct: 12  KDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLR 71

Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPI-YIVT 501
           E  +M  L H N++ L G+      + +++ 
Sbjct: 72  EGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 85.0 bits (211), Expect = 2e-18
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           L   RF++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQP 250

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 73.1 bits (180), Expect = 2e-14
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M HG LL ++R  +      V  L+   +QV +GM YL    ++HR
Sbjct: 105 MCHGDLLQFIRSPQRNP--TVKDLISFGLQVARGMEYLAEQKFVHR 148

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 90.0 bits (224), Expect = 2e-20
 Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 8/87 (9%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSED---DFIEEAKVM 476
               ID  +L  L +L     G + +G+W+G+ D+   ++K    S     DF EE   +
Sbjct: 3   KHSGIDFKQLNFLTKLNENHSGELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRL 61

Query: 477 TRLQHQNLVQLYGVCSK--HRPIYIVT 501
               H N++ + G C         ++T
Sbjct: 62  RIFSHPNVLPVLGACQSPPAPHPTLIT 88

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRV 245
                  +D+W++ VL+WE+ T  ++P+  L N E+  +V
Sbjct: 185 EDTNRRSADMWSFAVLLWELVT-REVPFADLSNMEIGMKV 223

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNY--IHR 46
           M +GSL N L    N +  +    +   + + +GMA+L          
Sbjct: 91  MPYGSLYNVLHEGTNFVV-DQSQAVKFALDMARGMAFLHTLEPLIPRH 137

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 89.6 bits (222), Expect = 2e-20
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 8/81 (9%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
            +G F++R    +G Y LSL        V HY I Q+  G++ + E     ++ ++V Y 
Sbjct: 181 TDGKFLLRPRKEQGTYALSLIY---GKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYL 237

Query: 394 RHNSGGLASRLKTSPCDRPVP 414
           +  + GL   LK        P
Sbjct: 238 KLKADGLIYCLK-----EACP 253

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 88.4 bits (219), Expect = 7e-20
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 214 DVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQ 273
            V  Y    W++           +  +V   +        P  WY   ++R+ AE  L  
Sbjct: 120 MVRDYVRQTWKLEGEALEQAIISQAPQVEKLIATTAHERMP--WYHSSLTREEAERKLYS 177

Query: 274 ED-KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV 331
               +G F++R    +G Y LSL        V HY I Q+  G++ + E     ++ ++
Sbjct: 178 GAQTDGKFLLRPRKEQGTYALSLIY---GKTVYHYLISQDKAGKYCIPEGTKFDTLWQL 233

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 81.9 bits (202), Expect = 1e-17
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 5/77 (6%)

Query: 257 WYVGDMSRQRAESILKQ-EDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           ++ G +SR  AE  LK     +G F++R    + G Y LSL          H+ I++   
Sbjct: 8   FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHD---VRFHHFPIERQLN 64

Query: 315 GEFFLSEKHCCHSIPEV 331
           G + ++         E+
Sbjct: 65  GTYAIAGGKAHCGPAEL 81

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 76.5 bits (188), Expect = 7e-16
 Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 4/72 (5%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
            +G F++R    + G Y LSL          H+ I++   G + ++         E+  +
Sbjct: 28  ADGLFLLRQCLRSLGGYVLSLVHD---VRFHHFPIERQLNGTYAIAGGKAHCGPAELCEF 84

Query: 393 HRHNSGGLASRL 404
           +  +  GL   L
Sbjct: 85  YSRDPDGLPCNL 96

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 91

 Score = 84.8 bits (210), Expect = 2e-20
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYVKE 180
            VV  LYPF ++   +L+ EKG   EV++  +    WWK K+  G VG +P NYV  
Sbjct: 18  HVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVV 74

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 83.8 bits (208), Expect = 3e-20
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           K V  LY F A    +LS+ K    EV++D    WWK++ ++G  GY+P N + E
Sbjct: 8   KYVKILYDFTARNANELSVLKDEVLEVLEDG-RQWWKLRSRSGQAGYVPCNILGE 61

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 60.0 bits (146), Expect = 6e-12
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           K V  LY F A    +LS+ K    EV++D    WWK++ ++G
Sbjct: 8   KYVKILYDFTARNANELSVLKDEVLEVLEDG-RQWWKLRSRSG 49

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens} Length = 68

 Score = 83.5 bits (207), Expect = 3e-20
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             +  LY F+A    +L++ +G + EV+D + + WW VK++ G  GYIPSN ++ 
Sbjct: 8   LKMQVLYEFEARNPRELTVVQGEKLEVLDHS-KRWWLVKNEAGRSGYIPSNILEP 61

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens} Length = 68

 Score = 60.0 bits (146), Expect = 7e-12
 Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
             +  LY F+A    +L++ +G + EV+D + + WW VK++ G
Sbjct: 8   LKMQVLYEFEARNPRELTVVQGEKLEVLDHS-KRWWLVKNEAG 49

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B Length = 193

 Score = 87.7 bits (217), Expect = 3e-20
 Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 19/132 (14%)

Query: 66  PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI------- 116
           P+ +I      A+  ++   G +++L  G   EV++ ++  WW  +   K G        
Sbjct: 6   PEFIILQTYR-AIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLE 64

Query: 117 --------RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 168
                     P+     +  VA+  + A+EG ++SL +G   EV+    + WW ++ K+ 
Sbjct: 65  PLDSPDETEDPEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR-KDD 123

Query: 169 SVGYIPSNYVKE 180
             GY PS Y+++
Sbjct: 124 VTGYFPSMYLQK 135

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1 Length = 103

 Score = 84.6 bits (210), Expect = 4e-20
 Identities = 24/156 (15%), Positives = 47/156 (30%), Gaps = 58/156 (37%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           +Y G ++++  E++L +   +G F++R+S S  G   L +  K     V  Y I +   G
Sbjct: 5   YYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFK---KLVYSYRIFREKHG 61

Query: 316 EFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEF 375
            + +                                                  ++    
Sbjct: 62  YYRIET----------------------------------------------DAHTPRTI 75

Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR 411
           F        ++ E+V+ +     GL   L   P  R
Sbjct: 76  F-------PNLQELVSKYGKPGQGLVVHLSN-PIMR 103

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1 Length = 71

 Score = 83.5 bits (207), Expect = 4e-20
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQE-HWWKVKDKNGSVGYIPSNYVKEKE 182
            +A Y F      DL   KG    ++  T++ +W+K K+K G  G IP+NYV+++E
Sbjct: 14  CIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 69

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 89.7 bits (223), Expect = 5e-20
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 6/80 (7%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKVMTRLQH 481
             ID  E+ + E +G G FGVV + KWR   DVA   ++  +     FI E + ++R+ H
Sbjct: 3   HMIDYKEIEVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESESE-RKAFIVELRQLSRVNH 60

Query: 482 QNLVQLYGVCSKHRPIYIVT 501
            N+V+LYG C    P+ +V 
Sbjct: 61  PNIVKLYGACLN--PVCLVM 78

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE--VVDRVQRGIILEKPK 255
           V   + +S K DV+++G+++WEV T  + P+  +      ++  V  G      K
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVIT-RRKPFDEIGGPAFRIMWAVHNGTRPPLIK 227

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 46.6 bits (111), Expect = 9e-06
 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 3/49 (6%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNY---IHR 46
              GSL N L   E          +  C+Q  +G+AYL        IHR
Sbjct: 81  AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A Length = 68

 Score = 83.1 bits (206), Expect = 5e-20
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
           P      K V+  Y F+A    +LS+++    EV+DD+   WWKV+D  G  GY+P N +
Sbjct: 2   PLGSGALKWVLCNYDFQARNSSELSVKQRDVLEVLDDS-RKWWKVRDPAGQEGYVPYNIL 60

Query: 179 K 179
            
Sbjct: 61  T 61

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A Length = 68

 Score = 60.8 bits (148), Expect = 3e-12
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 66  PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           P      K V+  Y F+A    +LS+++    EV+DD+   WWKV+D  G
Sbjct: 2   PLGSGALKWVLCNYDFQARNSSELSVKQRDVLEVLDDS-RKWWKVRDPAG 50

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} PDB: 3h0i_A 3h0f_A* Length = 73

 Score = 83.1 bits (206), Expect = 5e-20
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 114 NGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGY 172
            G  +        + VALY ++AI   DLS  KG ++++++ ++  WW+ +    G  GY
Sbjct: 4   TGTLRTRGGTGVTLFVALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGY 63

Query: 173 IPSNYVKEKE 182
           IPSNYV   +
Sbjct: 64  IPSNYVAPVD 73

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens} Length = 68

 Score = 82.7 bits (205), Expect = 7e-20
 Identities = 17/57 (29%), Positives = 30/57 (52%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
           +  +A+  F A + GDL+ +KG    V++   + WW  KD  G+ G +P  Y++   
Sbjct: 11  EEYIAVGDFTAQQVGDLTFKKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEPYS 67

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens} Length = 68

 Score = 59.2 bits (144), Expect = 1e-11
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           +  +A+  F A + GDL+ +KG    V++   + WW  KD  G
Sbjct: 11  EEYIAVGDFTAQQVGDLTFKKGEILLVIEKKPDGWWIAKDAKG 53

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 88.0 bits (218), Expect = 8e-20
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
             G F++R     G Y L L  +     V HY I ++  G+  + E     ++ ++V ++
Sbjct: 180 TNGKFLIRARDNNGSYALCLLHE---GKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHY 236

Query: 394 RHNSGGLASRLKTSPCDR 411
            + + GL   L T PC +
Sbjct: 237 SYKADGLLRVL-TVPCQK 253

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 83.0 bits (205), Expect = 4e-18
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 257 WYVGDMSRQRAESILKQEDKE-GCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           W+ G +SR+ +E I+    K  G F++R     G Y L L  +     V HY I ++  G
Sbjct: 160 WFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHE---GKVLHYRIDKDKTG 216

Query: 316 EFFLSEKHCCHSIPE 330
           +  + E     ++ +
Sbjct: 217 KLSIPEGKKFDTLWQ 231

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 81.9 bits (202), Expect = 9e-18
 Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 257 WYVGDMSRQRAESILKQED-KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           ++ G+++R+ AE  L Q    +G +++R S +  G + LS+          HY I++   
Sbjct: 7   FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGR---KAHHYTIERELN 63

Query: 315 GEFFLSEKHCCHSIPE 330
           G + ++      S  +
Sbjct: 64  GTYAIAGGRTHASPAD 79

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 79.2 bits (195), Expect = 8e-17
 Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 4/89 (4%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
            +G +++R S +  G + LS+          HY I++   G + ++      S  ++ +Y
Sbjct: 27  SDGLYLLRQSRNYLGGFALSVAHGR---KAHHYTIERELNGTYAIAGGRTHASPADLCHY 83

Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSH 421
           H   S GL   LK                
Sbjct: 84  HSQESDGLVCLLKKPFNRPQGVQPKTGPF 112

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A Length = 71

 Score = 82.3 bits (204), Expect = 8e-20
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYVKE 180
            VV  LYPF ++   +L+ EKG   EV++  +    WWK K+  G VG +P NYV  
Sbjct: 7   HVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVV 63

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A Length = 86

 Score = 82.5 bits (204), Expect = 1e-19
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNY 177
            +      +VVALY ++AI   DLS +KG +  V++++ E WWK +       GYIPSNY
Sbjct: 19  REAGSEDIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNY 77

Query: 178 VKEKELL 184
           V   + L
Sbjct: 78  VARVDSL 84

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Length = 302

 Score = 87.8 bits (217), Expect = 2e-19
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 4/74 (5%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 316
           WYVG ++R +AE +L  + ++G F++R SS +G Y  S+         KH  I + + G 
Sbjct: 196 WYVGKINRTQAEEMLSGK-RDGTFLIRESSQRGCYACSVVVD---GDTKHCVIYRTATGF 251

Query: 317 FFLSEKHCCHSIPE 330
            F    +   S+ E
Sbjct: 252 GFAEPYNLYGSLKE 265

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Length = 302

 Score = 87.0 bits (215), Expect = 4e-19
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 9/92 (9%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
           ++G F++R SS +G Y  S+         KH  I + + G  F    +   S+ E+V ++
Sbjct: 214 RDGTFLIRESSQRGCYACSVVVD---GDTKHCVIYRTATGFGFAEPYNLYGSLKELVLHY 270

Query: 394 RHNS-----GGLASRLKTSPCDRPVPATAGLS 420
           +H S       L   L   P   P P     +
Sbjct: 271 QHASLVQHNDALTVTLAH-PVRAPGPGPPSAA 301

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 87.3 bits (217), Expect = 3e-19
 Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 9/92 (9%)

Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVA--MMKEGTMSED--DFI 470
           + H         +   E +G G FG V  G         I  A   +   T   +   F+
Sbjct: 15  VQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFL 74

Query: 471 EEAKVMTRLQHQNLVQLYGVCSKHR-PIYIVT 501
            E  +M    H N++ L G+C +      +V 
Sbjct: 75  TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 82.7 bits (205), Expect = 1e-17
 Identities = 19/51 (37%), Positives = 32/51 (62%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 254

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 68.8 bits (169), Expect = 4e-13
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M+HG L N++R   +     V  L+   +QV KGM YL    ++HR
Sbjct: 109 MKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKYLASKKFVHR 152

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 87.9 bits (218), Expect = 4e-19
 Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 9/92 (9%)

Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG----SIDVA--MMKEGTMSED--DFI 470
           + H         +   E +G G FG V  G         I  A   +   T   +   F+
Sbjct: 79  VQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFL 138

Query: 471 EEAKVMTRLQHQNLVQLYGVCSKHR-PIYIVT 501
            E  +M    H N++ L G+C +      +V 
Sbjct: 139 TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 82.1 bits (203), Expect = 4e-17
 Identities = 19/51 (37%), Positives = 32/51 (62%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP 254
           L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 318

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 69.0 bits (169), Expect = 8e-13
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           M+HG L N++R   +     V  L+   +QV KGM +L    ++HR
Sbjct: 173 MKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFLASKKFVHR 216

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus} Length = 109

 Score = 81.4 bits (201), Expect = 5e-19
 Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKE 182
              + VALY ++A    DLS +KG  ++++++T+  WW+ +    G  GYIPSNYV   +
Sbjct: 26  GVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYVVPAD 85

Query: 183 LLGLQKY 189
            +  +++
Sbjct: 86  SIQAEEW 92

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 80.2 bits (198), Expect = 6e-19
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 8/65 (12%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK--------NGSVGYIPSNY 177
           +  VAL+ ++A    DLS   G + +V+D + E WW  +              GYIPSNY
Sbjct: 8   QYFVALFDYQARTAEDLSFRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNY 67

Query: 178 VKEKE 182
           V E  
Sbjct: 68  VAEDS 72

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A Length = 60

 Score = 79.6 bits (197), Expect = 7e-19
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           K   + Y F A    +LS+ K    E++DD    WWKV++ +G  G++P+N + 
Sbjct: 2   KYAKSKYDFVARNSSELSVMKDDVLEILDDR-RQWWKVRNASGDSGFVPNNILD 54

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A Length = 60

 Score = 57.6 bits (140), Expect = 3e-11
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           K   + Y F A    +LS+ K    E++DD    WWKV++ +G
Sbjct: 2   KYAKSKYDFVARNSSELSVMKDDVLEILDDR-RQWWKVRNASG 43

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A Length = 57

 Score = 79.1 bits (196), Expect = 8e-19
 Identities = 19/55 (34%), Positives = 28/55 (50%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           + V AL+ F   +  DL  +KG    + D  +E WW  +D  G  G IP  YV++
Sbjct: 2   EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 56

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A Length = 57

 Score = 56.0 bits (136), Expect = 1e-10
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           + V AL+ F   +  DL  +KG    + D  +E WW  +D  G
Sbjct: 2   EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEG 44

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 85.4 bits (212), Expect = 9e-19
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 13/93 (13%)

Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVA--MMKEGTMSED--------D 468
                 +   E+   +++G G FG+V +G+       VA   +  G    +        +
Sbjct: 10  KSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69

Query: 469 FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT 501
           F  E  +M+ L H N+V+LYG+     P  +V 
Sbjct: 70  FQREVFIMSNLNHPNIVKLYGLMHN--PPRMVM 100

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 4/48 (8%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNY--IHR 46
           +  G L + L    + +     + L + + +  G+ Y++  N   +HR
Sbjct: 103 VPCGDLYHRLLDKAHPI--KWSVKLRLMLDIALGIEYMQNQNPPIVHR 148

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 46.9 bits (112), Expect = 7e-06
 Identities = 5/34 (14%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV 241
            ++ K+D +++ ++++ + T G+ P+      ++
Sbjct: 204 SYTEKADTYSFAMILYTILT-GEGPFDEYSYGKI 236

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A Length = 79

 Score = 79.3 bits (196), Expect = 1e-18
 Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKE 182
             +  ALY ++A    DLS  KG ++++++ ++  WW+ +    G  GYIPS Y+   +
Sbjct: 5   STLFEALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSIYLAPVD 63

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus} Length = 141

 Score = 81.5 bits (201), Expect = 1e-18
 Identities = 33/173 (19%), Positives = 51/173 (29%), Gaps = 68/173 (39%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK---GLYTLSLYTKVPHPHVKHYHIKQNS 313
           WY G   R+ AE  L + +K+G F++R SS       YTL  +       V +  ++   
Sbjct: 25  WYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFN---KRVYNIPVRFIE 81

Query: 314 RGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRG 373
                                                            K Y + +   G
Sbjct: 82  AT-----------------------------------------------KQYALGKKKNG 94

Query: 374 EFFLSEKHCCHSIPEVVNYHRHNSGGLAS---------RLKTSPCDRPVPATA 417
           E          S+ E+VN H+HN   L           RLK +      P++ 
Sbjct: 95  E------EYFGSVVEIVNSHQHNPLVLIDSQNNTKDSTRLKYAVKVSSGPSSG 141

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A Length = 62

 Score = 78.5 bits (194), Expect = 1e-18
 Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)

Query: 123 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKE 180
           ++  +V+AL+ ++    GDL  EKG +  +++ + E WWK +    G  G+IP N+V +
Sbjct: 4   LQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFIPFNFVAK 61

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A 1qwf_A 1prl_C ... Length = 84

 Score = 79.0 bits (195), Expect = 2e-18
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKE 182
            + VALY + A    DLS  KG ++++++     WW+ +    G  GYIPSNYV   +
Sbjct: 7   TLFVALYDYNATRWTDLSFHKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYVAPVD 64

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 81.4 bits (200), Expect = 3e-18
 Identities = 18/63 (28%), Positives = 33/63 (52%)

Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
             +    +VVV  + F      DL  E+G   E++  T + WW+ ++  G+ G +P+NYV
Sbjct: 112 AYKKPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYV 171

Query: 179 KEK 181
           + +
Sbjct: 172 QIQ 174

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 71.0 bits (173), Expect = 1e-14
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 255 KAWYVGDMSRQRAESILKQ-EDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNS 313
           +++Y   MSR+ A  +L + +   G F++R+SS  G Y+L++        V HY I++  
Sbjct: 12  RSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSRPGEYSLTVREADEGNAVCHYLIERGE 71

Query: 314 RGE------FFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPH 361
             E                 IP + +     V+  +S    Y   +   V    
Sbjct: 72  PKEDGTAAAGVKIANQSFPDIPALLNHFKMRVLTEASLLAAYKKPIIEVVVGTF 125

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 56.3 bits (135), Expect = 1e-09
 Identities = 13/50 (26%), Positives = 23/50 (46%)

Query: 66  PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
             +    +VVV  + F      DL  E+G   E++  T + WW+ ++  G
Sbjct: 112 AYKKPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALG 161

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 52.1 bits (124), Expect = 5e-08
 Identities = 19/101 (18%), Positives = 31/101 (30%), Gaps = 6/101 (5%)

Query: 333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE------FFLSEKHCCHSI 386
              G F++R+SS  G Y+L++        V HY I++    E                 I
Sbjct: 33  VSIGTFLMRDSSRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPDI 92

Query: 387 PEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEID 427
           P ++N+ +      AS L                       
Sbjct: 93  PALLNHFKMRVLTEASLLAAYKKPIIEVVVGTFKFTGERET 133

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A Length = 109

 Score = 78.9 bits (195), Expect = 4e-18
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 5/77 (6%)

Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNS 313
           + W+  +++   AE++L     +G F+ R S S  G +TLS+        V H  I+   
Sbjct: 7   RRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRN---GAVTHIKIQNTG 63

Query: 314 RGEFFLSEKHCCHSIPE 330
              + L       ++ E
Sbjct: 64  DY-YDLYGGEKFATLAE 79

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A Length = 109

 Score = 68.1 bits (167), Expect = 3e-14
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 16/88 (18%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
            +G F+ R S S  G +TLS+        V H  I+      + L       ++ E+V Y
Sbjct: 28  VDGSFLARPSKSNPGDFTLSVRRN---GAVTHIKIQNTGDY-YDLYGGEKFATLAELVQY 83

Query: 393 HRHNSG------GLASRLKTSPCDRPVP 414
           +  + G      G    LK      P+ 
Sbjct: 84  YMEHHGQLKEKNGDVIELK-----YPLN 106

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1 Length = 65

 Score = 76.9 bits (190), Expect = 6e-18
 Identities = 19/57 (33%), Positives = 28/57 (49%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
           + V AL+ F   +  DL  +KG    + D  +E WW  +D  G  G IP  YV++  
Sbjct: 4   EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYH 60

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1 Length = 65

 Score = 54.5 bits (132), Expect = 4e-10
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           + V AL+ F   +  DL  +KG    + D  +E WW  +D  G
Sbjct: 4   EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEG 46

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A Length = 120

 Score = 78.9 bits (195), Expect = 6e-18
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYHIKQNSR 314
           WY GD+SR+     L+    +G F+VR++STK  G YTL+L       + K   I     
Sbjct: 13  WYWGDISREEVNEKLRDT-ADGTFLVRDASTKMHGDYTLTLRKGG---NNKLIKIFH-RD 67

Query: 315 GEFFLSEKHCCHSIPE 330
           G++  S+     S+ E
Sbjct: 68  GKYGFSDPLTFSSVVE 83

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A Length = 120

 Score = 73.9 bits (182), Expect = 4e-16
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 12/91 (13%)

Query: 334 KEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN 391
            +G F+VR++STK  G YTL+L       + K   I     G++  S+     S+ E++N
Sbjct: 31  ADGTFLVRDASTKMHGDYTLTLRKGG---NNKLIKIFH-RDGKYGFSDPLTFSSVVELIN 86

Query: 392 YHRHNS-----GGLASRLKTSPCDRPVPATA 417
           ++R+ S       L  +L   P  +      
Sbjct: 87  HYRNESLAQYNPKLDVKLLY-PVSKYQQDQV 116

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A Length = 65

 Score = 75.5 bits (186), Expect = 2e-17
 Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 7/64 (10%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK-------DKNGSVGYIPSNYV 178
           ++V+ALY ++     +++++KG    +++ T + WWKV+             G++P+ YV
Sbjct: 2   ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYV 61

Query: 179 KEKE 182
           K+ +
Sbjct: 62  KKLD 65

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A Length = 131

 Score = 77.6 bits (191), Expect = 2e-17
 Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 50/154 (32%)

Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNS 313
           K WY   +SR +A ++LK +   G F++R+S S +G Y L+L    P P  + +      
Sbjct: 20  KFWYKPHLSRDQAIALLKDK-DPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVE 78

Query: 314 RGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRG 373
                                                           V+H+ I+   +G
Sbjct: 79  ----------------------------------------------QLVRHFLIETGPKG 92

Query: 374 EFF--LSEKHCCHSIPEVVNYHRHNSGGLASRLK 405
                   +    S+  +V+ H  +   L   L+
Sbjct: 93  VKIKGCPSEPYFGSLSALVSQHSISPISLPCCLR 126

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens} Length = 90

 Score = 76.3 bits (188), Expect = 2e-17
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKELL 184
            +VVALY + +    DLS +KG +  V++++ E WWK +       GYIPSNYV   +  
Sbjct: 4   IIVVALYDYVSWSPDDLSFQKGDQMVVLEESGE-WWKARSLATRKEGYIPSNYVARVDSG 62

Query: 185 GLQKY 189
           G    
Sbjct: 63  GGTSG 67

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 82.7 bits (204), Expect = 3e-17
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 12/92 (13%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSED--DFIE 471
            KWE     L L + LG G FG V      G        ++ V M+KEG    +    + 
Sbjct: 15  SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 74

Query: 472 EAKVMTRL-QHQNLVQLYGVCSKH-RPIYIVT 501
           E K++  +  H N+V L G C+K   P+ ++ 
Sbjct: 75  ELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 70.7 bits (173), Expect = 2e-13
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPY-GRLKNTEVVDRVQRGIILEKPK 255
           +    ++ +SDVW++GVL+WE+F+ G  PY G   + E   R++ G  +  P 
Sbjct: 267 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 319

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 119

 Score = 77.0 bits (190), Expect = 3e-17
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 4/85 (4%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFL-SEKHCCHSIPEVVNY 392
             G F++R S +   YTLS   +       H+ +K    G F +  EK    S+  +V +
Sbjct: 36  PLGSFLIRVSHSHVGYTLSYKAQS---SCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTF 92

Query: 393 HRHNSGGLASRLKTSPCDRPVPATA 417
           H+         L T PC +     +
Sbjct: 93  HQQKPIEPRRELLTQPCRQKDSGPS 117

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 119

 Score = 76.6 bits (189), Expect = 3e-17
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 316
           W+ G +SR+ AE++L+     G F++R S +   YTLS   +       H+ +K    G 
Sbjct: 18  WFHGAISREDAENLLES-QPLGSFLIRVSHSHVGYTLSYKAQS---SCCHFMVKLLDDGT 73

Query: 317 FFL-SEKHCCHSIPE 330
           F +  EK    S+  
Sbjct: 74  FMIPGEKVAHTSLDA 88

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A* Length = 175

 Score = 77.0 bits (189), Expect = 1e-16
 Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 13/155 (8%)

Query: 260 GDMSRQRAESILKQEDKEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYHIKQNSRGEF 317
           GD+  ++ E +   E     +  ++ +T   G    +   K      + +  K  SR + 
Sbjct: 27  GDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKD- 85

Query: 318 FLSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSLYT--KVPHPHVKHYHIKQNSRGE 374
                     +    +  G F++R S ST G ++LS+    +     VKHY I+    G 
Sbjct: 86  ------AERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGG 139

Query: 375 FFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPC 409
           F++S +     + E+V ++ + S GL +RL   PC
Sbjct: 140 FYISPRITFPGLHELVRHYTNASDGLCTRLSR-PC 173

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A* Length = 175

 Score = 61.6 bits (149), Expect = 3e-11
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 254 PKAWYVGDMSRQRAESILKQ-EDKEGCFVVRNS-STKGLYTLSLYT--KVPHPHVKHYHI 309
           P+ W+  ++SR+ AE  L    +  G F++R S ST G ++LS+    +     VKHY I
Sbjct: 73  PEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKI 132

Query: 310 KQNSRGEFFLSEKHCCHSIPE 330
           +    G F++S +     + E
Sbjct: 133 RNLDNGGFYISPRITFPGLHE 153

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A* Length = 175

 Score = 57.8 bits (139), Expect = 5e-10
 Identities = 20/70 (28%), Positives = 35/70 (50%)

Query: 115 GIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIP 174
           G   P   ++  +V+AL+ ++    GDL  EKG +  +++ + E W       G  G+IP
Sbjct: 2   GSNPPASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIP 61

Query: 175 SNYVKEKELL 184
            N+V +   L
Sbjct: 62  FNFVAKANSL 71

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A* Length = 175

 Score = 48.1 bits (114), Expect = 9e-07
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 66  PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           P   ++  +V+AL+ ++    GDL  EKG +  +++ + E W       G
Sbjct: 6   PASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTG 55

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 74.0 bits (182), Expect = 1e-16
 Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 2/65 (3%)

Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNY 177
             + +    +  L  + + +       +G +  V+ D    WWK      G   YIP   
Sbjct: 11  NPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGG-WWKAISLSTGRESYIPGIC 69

Query: 178 VKEKE 182
           V    
Sbjct: 70  VARVS 74

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A* Length = 96

 Score = 74.1 bits (183), Expect = 2e-16
 Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           W+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+ + ++  G
Sbjct: 5   WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGN---DVQHFKVLRDGAG 61

Query: 316 EFFLSEKHCCHSIPE 330
             +       +S+ E
Sbjct: 62  -KYFLWVVKFNSLNE 75

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A* Length = 96

 Score = 64.9 bits (159), Expect = 2e-13
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 5/72 (6%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
            +G F++R S S  G ++LS+        V+H+ + ++  G  +       +S+ E+V+Y
Sbjct: 24  HDGAFLIRESESAPGDFSLSVKFGN---DVQHFKVLRDGAG-KYFLWVVKFNSLNELVDY 79

Query: 393 HRHNSGGLASRL 404
           HR  S     ++
Sbjct: 80  HRSTSVSRNQQI 91

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A Length = 106

 Score = 73.8 bits (182), Expect = 2e-16
 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 6/80 (7%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
           + G F+VR S +  G YTL + +      V+HY I  ++  +  + E+    ++ ++V +
Sbjct: 28  ETGLFLVRESTNYPGDYTLCVSSD---GKVEHYRIMYHA-SKLSIDEEVYFENLMQLVEH 83

Query: 393 HRHNSGGLASRLKTSPCDRP 412
           +  ++ GL +RL   P    
Sbjct: 84  YTSDADGLCTRL-IKPKVME 102

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A Length = 106

 Score = 70.3 bits (173), Expect = 3e-15
 Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 6/75 (8%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           W+ G ++R++AE +L    + G F+VR S +  G YTL + +      V+HY I  ++  
Sbjct: 10  WFHGKITREQAERLLYPP-ETGLFLVRESTNYPGDYTLCVSSD---GKVEHYRIMYHA-S 64

Query: 316 EFFLSEKHCCHSIPE 330
           +  + E+    ++ +
Sbjct: 65  KLSIDEEVYFENLMQ 79

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ... Length = 117

 Score = 74.2 bits (183), Expect = 2e-16
 Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
            +G F++R S S  G ++LS+        V+H+ + ++  G  +       +S+ E+V+Y
Sbjct: 27  HDGAFLIRESESAPGDFSLSVKFG---NDVQHFKVLRDGAG-KYFLWVVKFNSLNELVDY 82

Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSHDKW 424
           HR  S     ++        VP          
Sbjct: 83  HRSTSVSRNQQIFL-RDIEQVPQQPTYVQAHH 113

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ... Length = 117

 Score = 73.5 bits (181), Expect = 4e-16
 Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           W+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+ + ++  G
Sbjct: 8   WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKF---GNDVQHFKVLRDGAG 64

Query: 316 EFFLSEKHCCHSIPE 330
             +       +S+ E
Sbjct: 65  -KYFLWVVKFNSLNE 78

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 72.8 bits (179), Expect = 2e-16
 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT-QEHWWKVKDKNGSVGYIPSNYVK 179
           P     +Y +KA +  +L++E+    EV++D   E W K ++K G VGY+P  Y++
Sbjct: 13  PLTCKVVYSYKASQPDELTIEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQ 68

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 73.9 bits (182), Expect = 3e-16
 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%)

Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNS 313
           K W+ G +S+Q A ++L    +   F+VR S +T G Y+L   T   + +++ + I    
Sbjct: 16  KIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRT---NENIQRFKICPTP 72

Query: 314 RGEFFLSEKHCCHSIPEV 331
             +F +      +SI ++
Sbjct: 73  NNQFMMGG-RYYNSIGDI 89

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 70.4 bits (173), Expect = 5e-15
 Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 9/88 (10%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
           +   F+VR S +T G Y+L   T   + +++ + I      +F +      +SI +++++
Sbjct: 37  QVCSFLVRPSDNTPGDYSLYFRT---NENIQRFKICPTPNNQFMMGG-RYYNSIGDIIDH 92

Query: 393 HRHNSGGLASRLKTSPC---DRPVPATA 417
           +R         LK  P    D+  P++ 
Sbjct: 93  YRKEQIVEGYYLKE-PVPMQDQSGPSSG 119

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 71.1 bits (175), Expect = 7e-16
 Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVM-DDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
              VA+Y F+    G +S+ +G +  +M +D  + W +V+ K G  GY+P++Y++   
Sbjct: 8   GHCVAIYHFEGSSEGTISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVTS 65

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A Length = 63

 Score = 71.1 bits (175), Expect = 7e-16
 Identities = 17/58 (29%), Positives = 24/58 (41%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
           P + VALY F A     LS+ KG +  V+       W         G++PS Y+    
Sbjct: 5   PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSAYITPVN 62

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens} Length = 126

 Score = 72.8 bits (179), Expect = 9e-16
 Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 60/165 (36%)

Query: 249 IILEKPKAWYVGDMSRQRAESILKQED-KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKH 306
            ++ + + W+   +SR  A+ ++ Q+   +G F+VR+S S    + LS+        +KH
Sbjct: 20  HMIHRSQPWFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSH---GQKIKH 76

Query: 307 YHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYH 366
           + I                                            +  +   H +   
Sbjct: 77  FQIIPVEDDGEM-----------------------------------FHTLDDGHTR--- 98

Query: 367 IKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR 411
                              + ++V +++ N G L  +LK   C R
Sbjct: 99  ----------------FTDLIQLVEFYQLNKGVLPCKLKH-YCAR 126

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 76.0 bits (186), Expect = 2e-15
 Identities = 26/169 (15%), Positives = 50/169 (29%), Gaps = 50/169 (29%)

Query: 61  SFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG----- 115
           + +L   +    +VVV  + F      DL  E+G   E++  T + WW+ ++  G     
Sbjct: 136 ASLLAAYKKPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLV 195

Query: 116 --------------------------------------------IRKPDQMIRPKVVVAL 131
                                                       I    ++     V   
Sbjct: 196 PANYVQIQMEFHNDRTSKGASQSSIGSSGGGAERFSSASTSSDNIELQPRLPAKAKVTFD 255

Query: 132 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
               A +   L ++KG    V        +K +  +G +G +P  Y++ 
Sbjct: 256 RVPNAYDPTQLRVKKGQTVLVTQKMSNGMYKAE-LDGQIGSVPHTYLRF 303

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 74.5 bits (182), Expect = 6e-15
 Identities = 18/69 (26%), Positives = 34/69 (49%)

Query: 112 DKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVG 171
            +  +    +    +VVV  + F      DL  E+G   E++  T + WW+ ++  G+ G
Sbjct: 134 TEASLLAAYKKPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTG 193

Query: 172 YIPSNYVKE 180
            +P+NYV+ 
Sbjct: 194 LVPANYVQI 202

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 57.5 bits (138), Expect = 3e-09
 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 252 EKPKAWYVGDMSRQRAESILKQ-EDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIK 310
            + +++Y   MSR+ A  +L + +   G F++R+SS  G Y+L++        V HY I+
Sbjct: 38  FEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSRPGEYSLTVREADEGNAVCHYLIE 97

Query: 311 QNSRGE 316
           +    E
Sbjct: 98  RGEPKE 103

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 70.1 bits (172), Expect = 2e-15
 Identities = 10/57 (17%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQ-EHWWKVKDK-NGSVGYIPSNYVKEKE 182
            +        + G+L+  KG    +++  + + W++VK   +G  G + +  ++E+ 
Sbjct: 20  CITKCEHTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRERS 76

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus} Length = 70

 Score = 69.5 bits (171), Expect = 3e-15
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVKE 180
             + VAL+ + A    +L L+KG    V+   Q+ W K +    G  G  PS+YV  
Sbjct: 7   GNMFVALHTYSAHRPEELDLQKGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIP 63

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus} Length = 70

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
             + VAL+ + A    +L L+KG    V+   Q+ W K
Sbjct: 7   GNMFVALHTYSAHRPEELDLQKGEGIRVLGKYQDGWLK 44

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus} Length = 138

 Score = 71.4 bits (175), Expect = 4e-15
 Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 14/117 (11%)

Query: 307 YHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHY 365
           +H K  SR     +EK       E   K+G F+VR S +    YTLS +       V+H 
Sbjct: 25  FHKKVESRTS---AEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWR---SGRVQHC 78

Query: 366 HIKQ---NSRGEFFLSEKHCCHSIPEVVNYHRHNSG---GLASRLKTSPCDRPVPAT 416
            I+    N   +++L++    +SI  ++ ++R           RL T P   P P+ 
Sbjct: 79  RIRSTMENGVMKYYLTDNLTFNSIYALIQHYREAHLRCAEFELRL-TDPVPNPNPSG 134

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus} Length = 138

 Score = 63.3 bits (154), Expect = 2e-12
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 13/84 (15%)

Query: 257 WYVGDM-SRQRAESILKQED-----KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHI 309
           W+   + SR  AE +L++       K+G F+VR S +    YTLS +       V+H  I
Sbjct: 24  WFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWR---SGRVQHCRI 80

Query: 310 KQ---NSRGEFFLSEKHCCHSIPE 330
           +    N   +++L++    +SI  
Sbjct: 81  RSTMENGVMKYYLTDNLTFNSIYA 104

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A* Length = 102

 Score = 70.3 bits (173), Expect = 4e-15
 Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           WY G+++R +AE  L +   EG F++R+S S+   +++SL         KH+ ++     
Sbjct: 7   WYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKAS---GKNKHFKVQL--VD 61

Query: 316 EFFLSEKHCCHSIPE 330
             +   +   H++ E
Sbjct: 62  NVYCIGQRRFHTMDE 76

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A* Length = 102

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 13/67 (19%), Positives = 32/67 (47%), Gaps = 6/67 (8%)

Query: 332 KDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
           +  EG F++R+S S+   +++SL         KH+ ++       +   +   H++ E+V
Sbjct: 24  RGVEGDFLIRDSESSPSDFSVSLKAS---GKNKHFKVQL--VDNVYCIGQRRFHTMDELV 78

Query: 391 NYHRHNS 397
            +++   
Sbjct: 79  EHYKKAP 85

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens} Length = 69

 Score = 68.9 bits (169), Expect = 4e-15
 Identities = 19/60 (31%), Positives = 27/60 (45%)

Query: 121 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           Q+     VVALY + A    +L++ +G    V     E WW      G  GY P+N+V  
Sbjct: 2   QVDTAPTVVALYDYTANRSDELTIHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVAS 61

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens} Length = 69

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 14/48 (29%), Positives = 20/48 (41%)

Query: 68  QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           Q+     VVALY + A    +L++ +G    V     E WW      G
Sbjct: 2   QVDTAPTVVALYDYTANRSDELTIHRGDIIRVFFKDNEDWWYGSIGKG 49

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 79

 Score = 68.9 bits (169), Expect = 5e-15
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMD----DTQEHWWKVKDKNGSVGYIPSNYVKE 180
            +V  A+Y FKA    +LS+    + ++++         WW  +  NG  GY+PSNY+++
Sbjct: 13  NQVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAE-VNGKKGYVPSNYIRK 71

Query: 181 KE 182
            E
Sbjct: 72  TE 73

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1 Length = 83

 Score = 69.3 bits (170), Expect = 5e-15
 Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             ++V+ALY ++     +++++KG    +++ T + WWKV+  N   G++P+ YVK+
Sbjct: 16  GKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKK 71

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1 Length = 83

 Score = 48.2 bits (115), Expect = 1e-07
 Identities = 11/41 (26%), Positives = 26/41 (63%)

Query: 71  RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
             ++V+ALY ++     +++++KG    +++ T + WWKV+
Sbjct: 16  GKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE 56

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} Length = 73

 Score = 68.9 bits (169), Expect = 5e-15
 Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             ++V+ALY ++     +++++KG    +++ T + WWKV+  N   G++P+ YVK+
Sbjct: 4   GKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKK 59

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} Length = 73

 Score = 48.5 bits (116), Expect = 8e-08
 Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 71  RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
             ++V+ALY ++     +++++KG    +++ T + WWK  V D+ G 
Sbjct: 4   GKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGF 51

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A Length = 92

 Score = 69.5 bits (170), Expect = 6e-15
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 6/61 (9%)

Query: 126 KVVVALYPFKAIE-GGDLSLEKGAEYEVMDDT-----QEHWWKVKDKNGSVGYIPSNYVK 179
           +   ALY F       +++L+KG    ++           WWKV+ KNG++GYIP NY++
Sbjct: 15  EFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIE 74

Query: 180 E 180
            
Sbjct: 75  I 75

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A Length = 92

 Score = 46.7 bits (111), Expect = 5e-07
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 73  KVVVALYPFKAIE-GGDLSLEKGAEYEVMDDT-----QEHWWKVKDKNG 115
           +   ALY F       +++L+KG    ++           WWKV+ KNG
Sbjct: 15  EFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNG 63

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 68.4 bits (168), Expect = 6e-15
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
           +  VA+  + A +   LS  +G +  ++  T   WW  + + G  GYIP+N+V +  
Sbjct: 8   EEFVAIADYAATDETQLSFLRGEKILILRQTTADWWWGE-RAGCCGYIPANHVGKHS 63

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 9/37 (24%), Positives = 17/37 (45%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
           +  VA+  + A +   LS  +G +  ++  T   WW 
Sbjct: 8   EEFVAIADYAATDETQLSFLRGEKILILRQTTADWWW 44

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens} Length = 72

 Score = 68.6 bits (168), Expect = 6e-15
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 120 DQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK----DKNGSVGYIPS 175
           DQ       V L+ FK+    +LS   G  + V    ++ WW           + GY+P 
Sbjct: 5   DQAHLGPKYVGLWDFKSRTDEELSFRAGDVFHVARKEEQWWWATLLDEAGGAVAQGYVPH 64

Query: 176 NYVKEKE 182
           NY+ E+E
Sbjct: 65  NYLAERE 71

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 74.9 bits (184), Expect = 7e-15
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 8/91 (8%)

Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV--M 476
            +  +  +D   L LLE +G G++G V +G       VA+      +  +FI E  +  +
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDER-PVAVKVFSFANRQNFINEKNIYRV 61

Query: 477 TRLQHQNLVQLYGVCSK-----HRPIYIVTD 502
             ++H N+ +      +          +V +
Sbjct: 62  PLMEHDNIARFIVGDERVTADGRMEYLLVME 92

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ... Length = 62

 Score = 68.0 bits (167), Expect = 8e-15
 Identities = 16/57 (28%), Positives = 37/57 (64%), Gaps = 1/57 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
           ++V+ LY ++     +L+++KG    +++ T + WWK++  NG  G++P+ Y+K+ +
Sbjct: 7   ELVLVLYDYQEKSPRELTVKKGDILTLLNSTNKDWWKIE-VNGRQGFVPAAYLKKLD 62

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ... Length = 62

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 10/39 (25%), Positives = 25/39 (64%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
           ++V+ LY ++     +L+++KG    +++ T + WWK++
Sbjct: 7   ELVLVLYDYQEKSPRELTVKKGDILTLLNSTNKDWWKIE 45

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 80

 Score = 68.2 bits (167), Expect = 1e-14
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 6/61 (9%)

Query: 126 KVVVALYPFKAIE-GGDLSLEKGAEYEVMDDT-----QEHWWKVKDKNGSVGYIPSNYVK 179
           +   ALY F       +++L+KG    ++           WWKV+ KNG++GYIP NY++
Sbjct: 15  EFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIE 74

Query: 180 E 180
            
Sbjct: 75  I 75

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 80

 Score = 46.3 bits (110), Expect = 5e-07
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 73  KVVVALYPFKAIE-GGDLSLEKGAEYEVMDDT-----QEHWWKVKDKNG 115
           +   ALY F       +++L+KG    ++           WWKV+ KNG
Sbjct: 15  EFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNG 63

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 69.6 bits (171), Expect = 1e-14
 Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           W+ G+M RQ+ +++LK     G +++R   +    + +S+        VKH  + +    
Sbjct: 18  WFAGNMERQQTDNLLKSH-ASGTYLIRERPAEAERFAISIKFN---DEVKHIKVVEKDNW 73

Query: 316 EFFLSEKHCCHSIPE 330
              ++E     S+ E
Sbjct: 74  -IHITEAKKFDSLLE 87

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 64.6 bits (158), Expect = 6e-13
 Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 11/85 (12%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
             G +++R   +    + +S+        VKH  + +       ++E     S+ E+V Y
Sbjct: 36  ASGTYLIRERPAEAERFAISIKFND---EVKHIKVVEKDNW-IHITEAKKFDSLLELVEY 91

Query: 393 HRHNS-----GGLASRLKTSPCDRP 412
           ++ +S       L + LK  P   P
Sbjct: 92  YQCHSLKESFKQLDTTLKY-PYSGP 115

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A Length = 117

 Score = 69.3 bits (170), Expect = 1e-14
 Identities = 30/158 (18%), Positives = 51/158 (32%), Gaps = 60/158 (37%)

Query: 257 WYVGDMSRQRAESILKQED-KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           W+ G +SR+ ++ ++ Q+   +G F+VR S      + LSL        VKHY I     
Sbjct: 16  WFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCH---LQKVKHYLILP--- 69

Query: 315 GEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 374
                             ++EG                            Y    + +  
Sbjct: 70  -----------------SEEEGRL--------------------------YFSMDDGQTR 86

Query: 375 FFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRP 412
           F          + ++V +H+ N G L   L+   C R 
Sbjct: 87  F--------TDLLQLVEFHQLNRGILPCLLRH-CCTRV 115

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 74.0 bits (182), Expect = 1e-14
 Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 418 GLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV-- 475
           GL          ++ +++++G G++G V  GKWRG   VA+    T  E  +  E ++  
Sbjct: 26  GLPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWRGE-KVAVKVFFTTEEASWFRETEIYQ 84

Query: 476 MTRLQHQNLVQLYGVCSK----HRPIYIVTD 502
              ++H+N++       K       +Y++TD
Sbjct: 85  TVLMRHENILGFIAADIKGTGSWTQLYLITD 115

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A* Length = 138

 Score = 69.7 bits (171), Expect = 1e-14
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           WY G M R  AESIL     +G F+VR        + +S+   V    VKH  I     G
Sbjct: 28  WYAGPMERAGAESILANR-SDGTFLVRQRVKDAAEFAISIKYNV---EVKHIKIMTAE-G 82

Query: 316 EFFLSEKHCCHSIPE 330
            + ++EK     + E
Sbjct: 83  LYRITEKKAFRGLTE 97

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A* Length = 138

 Score = 65.5 bits (160), Expect = 5e-13
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 11/89 (12%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
            +G F+VR        + +S+   V    VKH  I     G + ++EK     + E+V +
Sbjct: 46  SDGTFLVRQRVKDAAEFAISIKYNV---EVKHIKIMTAE-GLYRITEKKAFRGLTELVEF 101

Query: 393 HRHNS-----GGLASRLKTSPCDRPVPAT 416
           ++ NS       L + L+  P   P   T
Sbjct: 102 YQQNSLKDCFKSLDTTLQF-PFKEPEKRT 129

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} PDB: 1jwo_A Length = 98

 Score = 68.4 bits (168), Expect = 2e-14
 Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 6/79 (7%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
           ++G F+VR S    G Y L +        V HY +         + E     ++ ++V +
Sbjct: 25  EDGLFLVRESARHPGDYVLCVSFGR---DVIHYRVLHRDGH-LTIDEAVFFCNLMDMVEH 80

Query: 393 HRHNSGGLASRLKTSPCDR 411
           +  + G + ++L   P  +
Sbjct: 81  YSKDKGAICTKL-VRPKRK 98

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} PDB: 1jwo_A Length = 98

 Score = 64.9 bits (159), Expect = 2e-13
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 6/75 (8%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           W+ G +S Q A   L+   ++G F+VR S    G Y L +        V HY +      
Sbjct: 7   WFHGKISGQEAVQQLQPP-EDGLFLVRESARHPGDYVLCVSFGR---DVIHYRVLHRDGH 62

Query: 316 EFFLSEKHCCHSIPE 330
              + E     ++ +
Sbjct: 63  -LTIDEAVFFCNLMD 76

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A Length = 105

 Score = 68.4 bits (168), Expect = 2e-14
 Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 60/157 (38%)

Query: 257 WYVGDMSRQRAESILKQED-KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           W+ G +SR+ +  I+KQ+   +G F++R+S S    + L+L     H  +K++ I     
Sbjct: 7   WFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCH---HQKIKNFQILPCE- 62

Query: 315 GEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 374
                             D +  F + + +TK                            
Sbjct: 63  -----------------DDGQTFFSLDDGNTK---------------------------- 77

Query: 375 FFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR 411
                      + ++V++++ N G L  +LK   C R
Sbjct: 78  --------FSDLIQLVDFYQLNKGVLPCKLKH-HCIR 105

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 111

 Score = 68.4 bits (168), Expect = 2e-14
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 6/79 (7%)

Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
              AWY+G +SRQ A++ L Q  + G F+VR+S +  G Y LS+        V HY I  
Sbjct: 17  DRSAWYMGPVSRQEAQTRL-QGQRHGMFLVRDSSTCPGDYVLSVSENS---RVSHYIINS 72

Query: 312 NSRGEFFLSEKHCCHSIPE 330
                F + +      +P 
Sbjct: 73  LPNRRFKIGD-QEFDHLPA 90

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 111

 Score = 63.4 bits (155), Expect = 1e-12
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
           + G F+VR+S +  G Y LS+        V HY I       F + +      +P ++ +
Sbjct: 39  RHGMFLVRDSSTCPGDYVLSVSENS---RVSHYIINSLPNRRFKIGD-QEFDHLPALLEF 94

Query: 393 HRHNSGGLASRLKTSPCDR 411
           ++ +     + L   P  R
Sbjct: 95  YKIHYLDT-TTLIE-PAPR 111

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 69

 Score = 66.6 bits (163), Expect = 3e-14
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 6/62 (9%)

Query: 124 RPKVVVALYPFKAIE-GGDLSLEKGAEYEVMDDT-----QEHWWKVKDKNGSVGYIPSNY 177
                 ALY F       +++L+KG    ++           WWKV+ KNG++GYIP NY
Sbjct: 6   HHHFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNY 65

Query: 178 VK 179
           ++
Sbjct: 66  IE 67

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 69

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 6/51 (11%)

Query: 71  RPKVVVALYPFKAIE-GGDLSLEKGAEYEVMDDT-----QEHWWKVKDKNG 115
                 ALY F       +++L+KG    ++           WWKV+ KNG
Sbjct: 6   HHHFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNG 56

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae} Length = 71

 Score = 66.5 bits (163), Expect = 3e-14
 Identities = 13/58 (22%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ-EHWWKVKD-KNGSVGYIPSNYVKE 180
            K  +  Y F A    +L+++ G +  ++DD + + WW  +   +G  G +P+ +++ 
Sbjct: 6   KKRGIVQYDFMAESQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEP 63

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A Length = 60

 Score = 65.6 bits (161), Expect = 5e-14
 Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ-EHWWKVKD-KNGSVGYIPSNYVK 179
           +  +  Y F A    +L+++ G +  ++DD + + WW  +   +G  G +P+ +++
Sbjct: 3   ERGIVQYDFMAESQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIE 58

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 187

 Score = 69.5 bits (170), Expect = 5e-14
 Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG 315
            Y G M +  AE++L+ +  EG F++R+S+ +  L+++S      +    H  I+Q +  
Sbjct: 36  CYWGVMDKYAAEALLEGK-PEGTFLLRDSAQEDYLFSVSFRR---YSRSLHARIEQWNHN 91

Query: 316 EFFLSEKHCCHSIPEVKD 333
             F +   C    P++  
Sbjct: 92  FSFDAHDPCVFHSPDITG 109

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 187

 Score = 65.3 bits (159), Expect = 2e-12
 Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 10/93 (10%)

Query: 334 KEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCC---HSIPEV 389
            EG F++R+S+ +  L+++S      +    H  I+Q +    F +   C      I  +
Sbjct: 54  PEGTFLLRDSAQEDYLFSVSFRR---YSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGL 110

Query: 390 VNYHRHNSGGLASRLK-TSPCDRPVPATAGLSH 421
           + +++  S  +      ++P  R  P +  L H
Sbjct: 111 LEHYKDPSACMFFEPLLSTPLIRTFPFS--LQH 141

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 70.1 bits (171), Expect = 6e-14
 Identities = 18/55 (32%), Positives = 31/55 (56%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
            +A Y FKA    +LS ++G   +V+++  +  W   + NG  G+IP NY++ K 
Sbjct: 3   AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKP 57

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 63.5 bits (154), Expect = 1e-11
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 6/92 (6%)

Query: 96  EYEVMDDTQEHWWKVKDKNGIR-----KPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEY 150
           ++  +++  ++          +           +P  V AL+ F   E G+L   +G   
Sbjct: 124 KFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFI 183

Query: 151 EVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
            VMD++  +WWK    +G  G  P NYV    
Sbjct: 184 HVMDNSDPNWWKGAC-HGQTGMFPRNYVTPVN 214

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 63.5 bits (154), Expect = 1e-11
 Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 4/123 (3%)

Query: 250 ILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYH 308
           I  KP  W+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+ 
Sbjct: 53  IEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFG---NDVQHFK 109

Query: 309 IKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIK 368
           + ++  G++FL           V       V RN          +  +  +         
Sbjct: 110 VLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDP 169

Query: 369 QNS 371
           Q  
Sbjct: 170 QED 172

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 60.1 bits (145), Expect = 2e-10
 Identities = 33/191 (17%), Positives = 68/191 (35%), Gaps = 23/191 (12%)

Query: 270 ILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP 329
           +L +E  +  +    +   G +    Y ++         I +    E    ++H      
Sbjct: 27  VLNEECDQNWYKAELNGKDG-FIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHD----- 80

Query: 330 EVKDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE 388
                 G F++R S S  G ++LS+        V+H+ + ++  G++FL      +S+ E
Sbjct: 81  ------GAFLIRESESAPGDFSLSVKFG---NDVQHFKVLRDGAGKYFLWV-VKFNSLNE 130

Query: 389 VVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRG 448
           +V+YHR  S     ++     ++       +          +  L      G F  V   
Sbjct: 131 LVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGEL--GFRRGDFIHVMDN 188

Query: 449 K----WRGSID 455
                W+G+  
Sbjct: 189 SDPNWWKGACH 199

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 54.3 bits (130), Expect = 1e-08
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
            +A Y FKA    +LS ++G   +V+++  +  W   + NG
Sbjct: 3   AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNG 43

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 16/56 (28%), Positives = 24/56 (42%)

Query: 59  EISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKN 114
           +I          +P  V AL+ F   E G+L   +G    VMD++  +WWK     
Sbjct: 145 QIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHG 200

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 71.7 bits (176), Expect = 7e-14
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 417 AGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV- 475
           +GL           ++L E +G G+FG V RGKWRG  +VA+    +  E  +  EA++ 
Sbjct: 30  SGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFREAEIY 88

Query: 476 -MTRLQHQNLVQLYGVCSKHR----PIYIVTD 502
               L+H+N++      +K       +++V+D
Sbjct: 89  QTVMLRHENILGFIAADNKDNGTWTQLWLVSD 120

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 40.9 bits (96), Expect = 7e-04
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 12/59 (20%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYL--------ERHNYIHRETKKS 51
             HGSL +YL R+  T+      ++ + +    G+A+L         +    HR+ K  
Sbjct: 122 HEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 176

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A* Length = 100

 Score = 66.5 bits (163), Expect = 7e-14
 Identities = 19/79 (24%), Positives = 44/79 (55%), Gaps = 6/79 (7%)

Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
           +   W+   +SR +AE++L  +   G F++R S S+ G +++S+  +     V+H+ + +
Sbjct: 7   EFPEWFHEGLSRHQAENLLMGK-DIGFFIIRASQSSPGDFSISVRHED---DVQHFKVMR 62

Query: 312 NSRGEFFLSEKHCCHSIPE 330
           +++G +FL       S+ +
Sbjct: 63  DTKGNYFL-WTEKFPSLNK 80

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A* Length = 100

 Score = 58.4 bits (142), Expect = 5e-11
 Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 5/65 (7%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
             G F++R S S+ G +++S+  +     V+H+ + ++++G +FL       S+ ++V+Y
Sbjct: 29  DIGFFIIRASQSSPGDFSISVRHED---DVQHFKVMRDTKGNYFL-WTEKFPSLNKLVDY 84

Query: 393 HRHNS 397
           +R  S
Sbjct: 85  YRTTS 89

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 97

 Score = 66.1 bits (161), Expect = 9e-14
 Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 8/75 (10%)

Query: 114 NGIRKPDQMIRPKVVVALYPFKAIEG--------GDLSLEKGAEYEVMDDTQEHWWKVKD 165
           +G     + +  ++ VAL+ +  +           +L  ++G   +V  D     +   +
Sbjct: 6   SGTDPGAEELPARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGE 65

Query: 166 KNGSVGYIPSNYVKE 180
               +G IP N V E
Sbjct: 66  TCARLGLIPCNMVSE 80

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 97

 Score = 41.8 bits (98), Expect = 3e-05
 Identities = 7/51 (13%), Positives = 18/51 (35%), Gaps = 8/51 (15%)

Query: 73  KVVVALYPFKAIEG--------GDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           ++ VAL+ +  +           +L  ++G   +V  D     +   +   
Sbjct: 18  RIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGETCA 68

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 71

 Score = 65.0 bits (159), Expect = 1e-13
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            V + P+ +    ++  EKG   EV+    E WW ++   G  G+ P++Y+K+
Sbjct: 11  YVTVQPYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIR-YLGKEGWAPASYLKK 62

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C* Length = 111

 Score = 66.2 bits (162), Expect = 1e-13
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 257 WYVGDMSRQRAESILKQ--EDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNS 313
           W+ G +SR +A  ++ +      G F+VR S + +G   L+   +      KH  +  N+
Sbjct: 11  WFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQ---GKAKHLRLSLNA 67

Query: 314 RGEFFLSEKHCCHSIPE 330
            G     +     SI +
Sbjct: 68  AG-QCRVQHLHFQSIFD 83

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C* Length = 111

 Score = 60.0 bits (146), Expect = 2e-11
 Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 8/87 (9%)

Query: 332 KDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
               G F+VR S + +G   L+   +      KH  +  N+ G     +     SI +++
Sbjct: 30  TGSHGVFLVRQSETRRGECVLTFNFQ---GKAKHLRLSLNAAG-QCRVQHLHFQSIFDML 85

Query: 391 NYHRHNSGGLASRLKTSPCD--RPVPA 415
            + R +   L S   +S       VP+
Sbjct: 86  EHFRVHPIPLESGG-SSDVVLVSYVPS 111

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic} Length = 73

 Score = 64.7 bits (158), Expect = 1e-13
 Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 2/52 (3%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             L P+ A  G +++++KG    +++ T + WWKV+  N   G++P+ YVK+
Sbjct: 4   PPLPPYSA-GGREVTMKKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKK 53

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic} Length = 73

 Score = 48.9 bits (117), Expect = 6e-08
 Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 9/69 (13%)

Query: 76  VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI------RKPDQMIRPKV 127
             L P+ A  G +++++KG    +++ T + WWKV+  D+ G       +K D     ++
Sbjct: 4   PPLPPYSA-GGREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSGTGKEL 62

Query: 128 VVALYPFKA 136
           V+ALY ++ 
Sbjct: 63  VLALYDYQE 71

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 64.6 bits (158), Expect = 2e-13
 Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
            +  V +  +K  E  +LSL+ G   +V++  +  WW V   +   G++P+ Y++ + 
Sbjct: 8   LEQYVVVSNYKKQENSELSLQAGEVVDVIEKNESGWWFVS-TSEEQGWVPATYLEAQN 64

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
            +  V +  +K  E  +LSL+ G   +V++  +  WW V 
Sbjct: 8   LEQYVVVSNYKKQENSELSLQAGEVVDVIEKNESGWWFVS 47

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 63.8 bits (156), Expect = 3e-13
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
            VALY F   E  DL +  G    +++D+ E WWK K     +G+ P+N+V+   
Sbjct: 10  YVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGK-IQDRIGFFPANFVQRLS 63

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
            VALY F   E  DL +  G    +++D+ E WWK  ++D+ G 
Sbjct: 10  YVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGF 53

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A Length = 114

 Score = 64.7 bits (158), Expect = 5e-13
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 8/74 (10%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 316
           WY G + R     +L      G F+VR S  K  Y LS+         +H+ I Q+    
Sbjct: 18  WYHGAIPRAEVAELLVHS---GDFLVRESQGKQEYVLSVLWDG---LPRHFII-QSLDNL 70

Query: 317 FFLSEKHCCHSIPE 330
           + L E     SIP 
Sbjct: 71  YRL-EGEGFPSIPL 83

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A Length = 114

 Score = 60.9 bits (148), Expect = 9e-12
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 6/81 (7%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
             G F+VR S  K  Y LS+         +H+ I Q+    + L E     SIP ++++ 
Sbjct: 34  HSGDFLVRESQGKQEYVLSVLWDG---LPRHFII-QSLDNLYRL-EGEGFPSIPLLIDHL 88

Query: 394 RHNSGGLASRLKTSPCDRPVP 414
                 L  +       R VP
Sbjct: 89  LSTQQPLTKKSGVV-LHRAVP 108

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae} Length = 70

 Score = 62.8 bits (153), Expect = 7e-13
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 125 PKVVVALYPFKAI--EGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
                ALYP+ A   +  ++S E+    +V  D +  WWK +  NG  G IPSNYV+ 
Sbjct: 5   IYKAKALYPYDADDDDAYEISFEQNEILQV-SDIEGRWWKARRANGETGIIPSNYVQL 61

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae} Length = 70

 Score = 41.6 bits (98), Expect = 2e-05
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 3/46 (6%)

Query: 72  PKVVVALYPFKAI--EGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
                ALYP+ A   +  ++S E+    +V  D +  WWK +  NG
Sbjct: 5   IYKAKALYPYDADDDDAYEISFEQNEILQV-SDIEGRWWKARRANG 49

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 80

 Score = 62.9 bits (153), Expect = 7e-13
 Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
               +    ++ ++  ++S   G E +V++  +  WW V+      G+ PS+Y+   E
Sbjct: 8   ATSYMTCSAYQKVQDSEISFPAGVEVQVLEKQESGWWYVR-FGELEGWAPSHYLVLDE 64

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 80

 Score = 44.0 bits (104), Expect = 4e-06
 Identities = 7/40 (17%), Positives = 19/40 (47%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
               +    ++ ++  ++S   G E +V++  +  WW V+
Sbjct: 8   ATSYMTCSAYQKVQDSEISFPAGVEVQVLEKQESGWWYVR 47

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 72

 Score = 62.7 bits (153), Expect = 8e-13
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
            P   +A + +      +LS +KGA   +     + WW+ +  NG  G IP  Y+  ++
Sbjct: 8   EPIEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWWEGR-HNGIDGLIPHQYIVVQD 65

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 72

 Score = 43.1 bits (102), Expect = 7e-06
 Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 2/48 (4%)

Query: 71  RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
            P   +A + +      +LS +KGA   +     + WW+      +G+
Sbjct: 8   EPIEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWWEGRHNGIDGL 55

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 69

 Score = 62.3 bits (152), Expect = 1e-12
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
            +  +ALYP+ ++E GDL+  +G E  V       WW         G  PSNYVK K+
Sbjct: 8   GEEYIALYPYSSVEPGDLTFTEGEEILVTQKD-GEWWTGS-IGDRSGIFPSNYVKPKD 63

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 69

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
            +  +ALYP+ ++E GDL+  +G E  V       WW   + D++GI
Sbjct: 8   GEEYIALYPYSSVEPGDLTFTEGEEILVTQKD-GEWWTGSIGDRSGI 53

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 61.8 bits (151), Expect = 1e-12
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            KV  ALY F+     +L  E+G    + D +  +WWK     G  G IPSNYV E
Sbjct: 7   GKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGT-SKGRTGLIPSNYVAE 61

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
            KV  ALY F+     +L  E+G    + D +  +WWK
Sbjct: 7   GKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWK 44

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 62.5 bits (152), Expect = 1e-12
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
               + + A    +LSL KG +  VM+   + WW+    NG VG+ PSNYV E
Sbjct: 20  AYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWRG-SYNGQVGWFPSNYVTE 71

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 43.6 bits (103), Expect = 7e-06
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
               + + A    +LSL KG +  VM+   + WW+
Sbjct: 20  AYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWR 54

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
              L+ F      +L +  G    V+    ++W  V   NG  G +P NY++ 
Sbjct: 10  HRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVM-FNGQKGLVPCNYLEP 61

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
              L+ F      +L +  G    V+    ++W  V   NG
Sbjct: 10  HRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVM-FNG 49

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens} Length = 69

 Score = 61.5 bits (150), Expect = 2e-12
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            +   ALY + A    +L L  G   EV+ + ++ WW V+ +NG  G++P +Y+++
Sbjct: 8   AQEYRALYDYTAQNPDELDLSAGDILEVILEGEDGWWTVE-RNGQRGFVPGSYLEK 62

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens} Length = 69

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
            +   ALY + A    +L L  G   EV+ + ++ WW V+
Sbjct: 8   AQEYRALYDYTAQNPDELDLSAGDILEVILEGEDGWWTVE 47

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 75

 Score = 61.7 bits (150), Expect = 2e-12
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGS---VGYIPS 175
                   V V++  ++  E      ++G   EV++     WW  +  +G     G++PS
Sbjct: 4   GSSGNLKDVYVSIADYEGDEE-TAGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPS 62

Query: 176 NYVKEKE 182
           NY+++K 
Sbjct: 63  NYLEKKN 69

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 61.5 bits (150), Expect = 2e-12
 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 126 KVVVALYPFKAIEGGD-LSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKE 180
           + V A+ P+  +   D +S  KG  + V ++ ++ W  V + +    G I  + V+E
Sbjct: 8   RRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEE 64

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens} Length = 141

 Score = 63.7 bits (155), Expect = 2e-12
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 9/78 (11%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           WY G ++R  AE  L     +G F+VR+SS    L +LS  +   H    H  I+  S G
Sbjct: 26  WYWGPITRWEAEGKLANV-PDGSFLVRDSSDDRYLLSLSFRS---HGKTLHTRIEH-SNG 80

Query: 316 EFFLSEKHCCH---SIPE 330
            F   E+       SI +
Sbjct: 81  RFSFYEQPDVEGHTSIVD 98

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens} Length = 141

 Score = 58.3 bits (141), Expect = 2e-10
 Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 8/92 (8%)

Query: 334 KEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCH---SIPEV 389
            +G F+VR+SS    L +LS  +   H    H  I+  S G F   E+       SI ++
Sbjct: 44  PDGSFLVRDSSDDRYLLSLSFRS---HGKTLHTRIEH-SNGRFSFYEQPDVEGHTSIVDL 99

Query: 390 VNYHRHNSGGLASRLKTSPCDRPVPATAGLSH 421
           + +   +S   A     S           L++
Sbjct: 100 IEHSIGDSENGAFCYSRSRLPGSATYPVRLTN 131

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens} Length = 58

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           + KV  ALY F+     +L  E+G    + D +  +WWK     G  G IPSNYV E
Sbjct: 2   QVKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGT-SKGRTGLIPSNYVAE 57

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens} Length = 58

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 71  RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
           + KV  ALY F+     +L  E+G    + D +  +WWK
Sbjct: 2   QVKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWK 40

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus} Length = 60

 Score = 60.7 bits (148), Expect = 3e-12
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           P+  +A + +      +LS +KGA   +     E WW+ +  NG  G +P  Y+ 
Sbjct: 6   PEFAIAKFDYVGRSARELSFKKGASLLLYHRASEDWWEGR-HNGIDGLVPHQYIV 59

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus} Length = 60

 Score = 43.0 bits (102), Expect = 5e-06
 Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
           P+  +A + +      +LS +KGA   +     E WW+      +G+
Sbjct: 6   PEFAIAKFDYVGRSARELSFKKGASLLLYHRASEDWWEGRHNGIDGL 52

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 61.2 bits (149), Expect = 3e-12
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
            VA + +      +LS  +G    + +     WW+ +  NG  G IP  Y+    
Sbjct: 13  AVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRGE-HNGMRGLIPHKYITLPA 66

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 43.5 bits (103), Expect = 4e-06
 Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 2/44 (4%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
            VA + +      +LS  +G    + +     WW+       G+
Sbjct: 13  AVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRGEHNGMRGL 56

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 109

 Score = 62.2 bits (151), Expect = 3e-12
 Identities = 26/157 (16%), Positives = 47/157 (29%), Gaps = 49/157 (31%)

Query: 256 AWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           +WY G +SRQ A ++L Q  + G F+VR+S ++ G Y LS+        V HY I  +  
Sbjct: 1   SWYWGRLSRQEAVALL-QGQRHGVFLVRDSSTSPGDYVLSVSEN---SRVSHYIINSSGP 56

Query: 315 GEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 374
                                                                       
Sbjct: 57  RPPVPPSPAQPPPGVSPS------------------------------------------ 74

Query: 375 FFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR 411
                     S+P ++ +++ +     + ++  P  R
Sbjct: 75  RLRIGDQEFDSLPALLEFYKIHYLDTTTLIE--PVSR 109

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A Length = 58

 Score = 60.3 bits (147), Expect = 3e-12
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           P  V AL+ F   E G+L   +G    VMD++  +WWK    +G  G  P NYV  
Sbjct: 2   PTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGA-CHGQTGMFPRNYVTA 56

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A Length = 58

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
           P  V AL+ F   E G+L   +G    VMD++  +WWK     + G+
Sbjct: 2   PTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGM 48

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 69

 Score = 60.7 bits (148), Expect = 3e-12
 Identities = 18/56 (32%), Positives = 26/56 (46%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            + V ALY +KA    +L+  +GA    +      WWK         Y PSNYV++
Sbjct: 7   GRTVKALYDYKAKRSDELTFCRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVED 62

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 69

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
            + V ALY +KA    +L+  +GA    +      WWK
Sbjct: 7   GRTVKALYDYKAKRSDELTFCRGALIHNVSKEPGGWWK 44

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus} Length = 120

 Score = 62.3 bits (151), Expect = 3e-12
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGSVGYIPSNYVKEKELLG 185
            V LY FKA    +L +  G    +       W+  K  ++ G  G +P +YV+  +L+ 
Sbjct: 6   AVTLYEFKAERDDELDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYVRIIDLMD 65

Query: 186 LQKYDDVNGLTLELIHQVLN 205
             KY  V+    E + ++++
Sbjct: 66  PAKYASVDTYDREQVMKIID 85

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus} Length = 120

 Score = 45.3 bits (107), Expect = 3e-06
 Identities = 12/45 (26%), Positives = 17/45 (37%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKP 119
            V LY FKA    +L +  G    +       W+  K  N +  P
Sbjct: 6   AVTLYEFKAERDDELDVSPGENLSICAHYDYEWFIAKPINRLGGP 50

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 80

 Score = 60.9 bits (148), Expect = 4e-12
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 114 NGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWKVKDKNGSVG 171
           +G  +   + +P  V ALY F+  + GDL+ + G    V+  T  H  WW+ K   G  G
Sbjct: 6   SGHERVGNLNQPIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGK-LRGQTG 64

Query: 172 YIPSNYVK 179
             P+NYV 
Sbjct: 65  IFPANYVT 72

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 80

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 66  PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWK--VKDKNGI 116
              + +P  V ALY F+  + GDL+ + G    V+  T  H  WW+  ++ + GI
Sbjct: 11  VGNLNQPIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLRGQTGI 65

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 70

 Score = 60.7 bits (148), Expect = 4e-12
 Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVKE 180
                A+Y ++     +L L +G   +VM    + W+  V  +    G  P NYV  
Sbjct: 7   GTPYRAMYQYRPQNEDELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAP 63

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 70

 Score = 40.7 bits (96), Expect = 4e-05
 Identities = 8/38 (21%), Positives = 16/38 (42%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
                A+Y ++     +L L +G   +VM    + W+ 
Sbjct: 7   GTPYRAMYQYRPQNEDELELREGDRVDVMQQCDDGWFV 44

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A Length = 58

 Score = 60.2 bits (147), Expect = 4e-12
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           +   ALY F+A+E  +L    G   EV+D +   WW  +  +  +G  P+NYV  
Sbjct: 2   RWARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGR-LHNKLGLFPANYVAP 55

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A Length = 58

 Score = 45.2 bits (108), Expect = 7e-07
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
           +   ALY F+A+E  +L    G   EV+D +   WW   + +K G+
Sbjct: 2   RWARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRLHNKLGL 47

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 60.8 bits (148), Expect = 5e-12
 Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 114 NGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYI 173
           +G     +       VALY ++A    ++S +       ++   + WW+     G  G  
Sbjct: 6   SGTYDEYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRG-VCKGRYGLF 64

Query: 174 PSNYVKEKE 182
           P+NYV+ ++
Sbjct: 65  PANYVELRQ 73

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 41.2 bits (97), Expect = 3e-05
 Identities = 8/44 (18%), Positives = 18/44 (40%)

Query: 66  PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
             +       VALY ++A    ++S +       ++   + WW+
Sbjct: 11  EYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWR 54

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum} Length = 80

 Score = 60.5 bits (147), Expect = 6e-12
 Identities = 12/62 (19%), Positives = 22/62 (35%)

Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
                  K   AL  +   +   L  ++     +    QE+ W +   NG  G  P ++V
Sbjct: 4   LGSPEFAKYARALKDYNVSDTSLLPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVDHV 63

Query: 179 KE 180
           + 
Sbjct: 64  EI 65

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum} Length = 80

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 9/50 (18%), Positives = 16/50 (32%)

Query: 66  PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
                  K   AL  +   +   L  ++     +    QE+ W +   NG
Sbjct: 4   LGSPEFAKYARALKDYNVSDTSLLPFKRNDIITITFKDQENKWFMGQLNG 53

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 62

 Score = 59.5 bits (145), Expect = 7e-12
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 121 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           Q+ +   V AL+ ++A +  DL  ++G    V+    E W + +   G VG  P  +V++
Sbjct: 1   QLKKGSQVEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLEGE-SKGKVGIFPKVFVED 59

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 62

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 68  QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
           Q+ +   V AL+ ++A +  DL  ++G    V+    E W +   K K GI
Sbjct: 1   QLKKGSQVEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLEGESKGKVGI 51

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 98

 Score = 60.5 bits (147), Expect = 8e-12
 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V+A+Y + A    +LS  KG    VM+     WW+ +  NG  G  PSNYVK 
Sbjct: 37  VIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQGE-INGVTGLFPSNYVKM 88

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 98

 Score = 43.6 bits (103), Expect = 8e-06
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
           V+A+Y + A    +LS  KG    VM+     WW+
Sbjct: 37  VIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQ 71

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens} Length = 72

 Score = 59.6 bits (145), Expect = 9e-12
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 117 RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
              +     + V A+Y F+A E  +L+ + G    V+DD+  +WWK +  +  +G  PSN
Sbjct: 9   SHMNHQHEARKVRAIYDFEAAEDNELTFKAGEIITVLDDSDPNWWKGE-THQGIGLFPSN 67

Query: 177 YVKE 180
           +V  
Sbjct: 68  FVTA 71

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens} Length = 72

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 66  PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
            +     + V A+Y F+A E  +L+ + G    V+DD+  +WWK       G+
Sbjct: 11  MNHQHEARKVRAIYDFEAAEDNELTFKAGEIITVLDDSDPNWWKGETHQGIGL 63

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A* Length = 104

 Score = 60.7 bits (148), Expect = 9e-12
 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 9/79 (11%)

Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
           + + W+ G +SR+ AE++L+     G F+VR S +T G Y L+          KH  +  
Sbjct: 5   RGEPWFHGKLSRREAEALLQL---NGDFLVRESTTTPGQYVLTGLQSG---QPKHLLLVD 58

Query: 312 NSRGEFFLSEKHCCHSIPE 330
                   ++ H   S+  
Sbjct: 59  P--EGVVRTKDHRFESVSH 75

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A* Length = 104

 Score = 57.3 bits (139), Expect = 1e-10
 Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 6/82 (7%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
             G F+VR S +T G Y L+          KH  +          ++ H   S+  +++Y
Sbjct: 25  LNGDFLVRESTTTPGQYVLTGLQSG---QPKHLLLVDP--EGVVRTKDHRFESVSHLISY 79

Query: 393 HRHNSGGLASRLKTSPCDRPVP 414
           H  N   + S        +PV 
Sbjct: 80  HMDNHLPIISAGSELCLQQPVE 101

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 65.0 bits (157), Expect = 9e-12
 Identities = 30/197 (15%), Positives = 50/197 (25%), Gaps = 53/197 (26%)

Query: 38  LERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEY 97
           L     IH     +L               +    + V AL+ F   +  DL  +KG   
Sbjct: 100 LLEFYKIHYLDTTTLIEPVSRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDIL 159

Query: 98  EVMDDTQEHWWK---------------VKDKNGIRKPDQMIRPK---------------- 126
            + D  +E WW                V+           +                   
Sbjct: 160 RIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPASASVSALIGGNQEGSHPQPLGGPEPG 219

Query: 127 ---------------------VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD 165
                                 V+      A +   L+LE G   +V        W+  +
Sbjct: 220 PYAQPSVNTPLPNLQNGPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEG-E 278

Query: 166 KNGSVGYIPSNYVKEKE 182
            NG  G+ P  +V+  +
Sbjct: 279 CNGKRGHFPFTHVRLLD 295

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 51.1 bits (121), Expect = 3e-07
 Identities = 29/144 (20%), Positives = 48/144 (33%), Gaps = 9/144 (6%)

Query: 250 ILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYH 308
             E+  +WY G +SRQ A ++L Q  + G F+VR+SST  G Y LS+        V HY 
Sbjct: 6   DSEERSSWYWGRLSRQEAVALL-QGQRHGVFLVRDSSTSPGDYVLSVSEN---SRVSHYI 61

Query: 309 IKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIK 368
           I  +                P          + +     L  L  + K+ +         
Sbjct: 62  INSSGPRPPVPPSPA----QPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEP 117

Query: 369 QNSRGEFFLSEKHCCHSIPEVVNY 392
            +   +          +      +
Sbjct: 118 VSRSRQGSGVILRQEEAEYVRALF 141

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1 Length = 62

 Score = 59.1 bits (144), Expect = 1e-11
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V ALY F+A+E  +L+ + G    V+DD+  +WW+ +  +   G  PSN+V  
Sbjct: 8   VRALYDFEAVEDNELTFKHGELITVLDDSDANWWQGE-NHRGTGLFPSNFVTT 59

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1 Length = 62

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
           V ALY F+A+E  +L+ + G    V+DD+  +WW+       G+
Sbjct: 8   VRALYDFEAVEDNELTFKHGELITVLDDSDANWWQGENHRGTGL 51

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 59.7 bits (145), Expect = 1e-11
 Identities = 10/52 (19%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
             A++    +   +L+ + G   +V+D + + WW  +  +   G+ P+++V+
Sbjct: 13  AEAVWDHVTMANRELAFKAGDVIKVLDASNKDWWWGQ-IDDEEGWFPASFVR 63

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 45.5 bits (108), Expect = 1e-06
 Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
             A++    +   +L+ + G   +V+D + + WW   + D+ G 
Sbjct: 13  AEAVWDHVTMANRELAFKAGDVIKVLDASNKDWWWGQIDDEEGW 56

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 60.1 bits (146), Expect = 1e-11
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            + V ALY F+A+E  +L+ + G    V+DD+  +WWK +  +  +G  PSN+V  
Sbjct: 17  ARKVRALYDFEAVEDNELTFKHGEIIIVLDDSDANWWKGE-NHRGIGLFPSNFVTT 71

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 45.5 bits (108), Expect = 1e-06
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
            + V ALY F+A+E  +L+ + G    V+DD+  +WWK       G+
Sbjct: 17  ARKVRALYDFEAVEDNELTFKHGEIIIVLDDSDANWWKGENHRGIGL 63

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A Length = 58

 Score = 59.1 bits (144), Expect = 1e-11
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            K V AL+ F   E G+L+ ++G    +++    +WW+ +  N   G  PSNYV  
Sbjct: 2   TKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQ-LNNRRGIFPSNYVCP 56

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A Length = 58

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
            K V AL+ F   E G+L+ ++G    +++    +WW+
Sbjct: 2   TKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWE 39

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 7/91 (7%)

Query: 418 GLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVA--MMKEGTMSEDDFIEEAKV 475
            L  +        L LLE    G+FG V + +      VA  +             E   
Sbjct: 13  DLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNE-YVAVKIFPIQDKQSWQNEYEVYS 71

Query: 476 MTRLQHQNLVQLYGVCSKHRPI----YIVTD 502
           +  ++H+N++Q  G   +   +    +++T 
Sbjct: 72  LPGMKHENILQFIGAEKRGTSVDVDLWLITA 102

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A Length = 58

 Score = 58.7 bits (143), Expect = 1e-11
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V ALY + A  G +L+ ++G    V       WW+  + NG  G++P+NYV++
Sbjct: 6   VKALYDYDAQTGDELTFKEGDTIIVHQKDPAGWWEG-ELNGKRGWVPANYVQD 57

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 169

 Score = 61.8 bits (150), Expect = 2e-11
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 6/75 (8%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           WY G M+   A+  LK+   EG F++R+SS    L T+S+ T        +  I+    G
Sbjct: 19  WYWGSMTVNEAKEKLKEA-PEGTFLIRDSSHSDYLLTISVKT---SAGPTNLRIEY-QDG 73

Query: 316 EFFLSEKHCCHSIPE 330
           +F L    C  S  +
Sbjct: 74  KFRLDSIICVKSKLK 88

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 169

 Score = 50.6 bits (121), Expect = 1e-07
 Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 11/88 (12%)

Query: 334 KEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSR------GEFFLSEKHCCHSI 386
            EG F++R+SS    L T+S+ T        +  I+               S+     S+
Sbjct: 37  PEGTFLIRDSSHSDYLLTISVKT---SAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSV 93

Query: 387 PEVVNYHRHNSGGLASRLKTSPCDRPVP 414
             +++Y+        +  + +P +  V 
Sbjct: 94  VHLIDYYVQMCKDKRTGPE-APRNGTVH 120

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus} Length = 164

 Score = 61.9 bits (150), Expect = 2e-11
 Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 5/75 (6%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           +Y   ++   A  +L  E   G F++R+SS +   +TLS+ T       K+  I+     
Sbjct: 25  FYWSAVTGGEANLLLSAE-PAGTFLIRDSSDQRHFFTLSVKT---QSGTKNLRIQCEGGS 80

Query: 316 EFFLSEKHCCHSIPE 330
               S+      +P 
Sbjct: 81  FSLQSDPRSTQPVPR 95

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 59.4 bits (144), Expect = 2e-11
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVK 179
            VA Y FK     +LS  KG    ++    E+W++      G  G  P++YV+
Sbjct: 20  AVAQYTFKGDLEVELSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQ 72

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
            VA Y FK     +LS  KG    ++    E+W++
Sbjct: 20  AVAQYTFKGDLEVELSFRKGEHICLIRKVNENWYE 54

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A Length = 58

 Score = 58.3 bits (142), Expect = 2e-11
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           V ALY F   + GDL L+ G + ++++     W+K    NG  G  P+NYVK
Sbjct: 5   VEALYQFDPQQDGDLGLKPGDKVQLLEKLSPEWYKGS-CNGRTGIFPANYVK 55

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A Length = 58

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
           V ALY F   + GDL L+ G + ++++     W+K     + GI
Sbjct: 5   VEALYQFDPQQDGDLGLKPGDKVQLLEKLSPEWYKGSCNGRTGI 48

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens} Length = 116

 Score = 60.0 bits (146), Expect = 2e-11
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 9/75 (12%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           WY G + R  A+ +LK+   +G F+VR S    G Y LS+Y+       +H+ I      
Sbjct: 19  WYHGAIPRIEAQELLKK---QGDFLVRESHGKPGEYVLSVYSD---GQRRHFII--QYVD 70

Query: 316 EFFLSEKHCCHSIPE 330
             +  E     +IP+
Sbjct: 71  NMYRFEGTGFSNIPQ 85

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens} Length = 116

 Score = 56.6 bits (137), Expect = 3e-10
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
           K+G F+VR S    G Y LS+Y+       +H+ I        +  E     +IP+++++
Sbjct: 35  KQGDFLVRESHGKPGEYVLSVYSD---GQRRHFII--QYVDNMYRFEGTGFSNIPQLIDH 89

Query: 393 HRHNSGGLASRLKTSPCDRPVP 414
           H      +  +        P+P
Sbjct: 90  HYTTKQVITKKSGV-VLLNPIP 110

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A Length = 68

 Score = 58.8 bits (143), Expect = 2e-11
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             A + FKA    +L L+KG    +     ++W++ +  +G VG  P  Y++ 
Sbjct: 10  ARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGE-HHGRVGIFPRTYIEL 61

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A Length = 68

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
             A + FKA    +L L+KG    +     ++W++
Sbjct: 10  ARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYE 44

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 78

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             AL  F+  +  +L   K     ++    EH W   + NG  G+ P+ +V+ 
Sbjct: 10  AKALLDFERHDDDELGFRKNDIITIISQKDEHCWVG-ELNGLRGWFPAKFVEV 61

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 78

 Score = 43.1 bits (102), Expect = 7e-06
 Identities = 8/35 (22%), Positives = 13/35 (37%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
             AL  F+  +  +L   K     ++    EH W 
Sbjct: 10  AKALLDFERHDDDELGFRKNDIITIISQKDEHCWV 44

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A Length = 65

 Score = 58.2 bits (141), Expect = 2e-11
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 125 PKVVVALYPFKAIEGGD-LSLEKGAEYEVMDDTQEHWWKVK-DKNGSVGYIPSNYVKE 180
            + V A+ P+  +   D +S  KG  + V ++ ++ W  V   +    G I  + V+E
Sbjct: 5   RRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEE 62

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A Length = 68

 Score = 58.1 bits (141), Expect = 3e-11
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGS--VGYIPSNYVK 179
           P  VVA +P+K+    DL+ EK  E  V       W+    +D NG    G  P ++V 
Sbjct: 7   PFKVVAQFPYKSDYEDDLNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVIEGIFPKSFVA 65

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A Length = 68

 Score = 46.1 bits (110), Expect = 5e-07
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGIRK 118
           P  VVA +P+K+    DL+ EK  E  V       W+    +D NG   
Sbjct: 7   PFKVVAQFPYKSDYEDDLNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVI 55

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 96

 Score = 59.1 bits (143), Expect = 3e-11
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 114 NGIRKPDQMIRPKVVVALYPFKAIEG------GDLSLEKGAEYEVMDDTQEH-WWKVKDK 166
           +G  K     +  + VA Y +   +G       +L L  G    V  D  E  +++ +  
Sbjct: 6   SGTSKQRYSGKVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELL 65

Query: 167 NGSVGYIPSNYVKE 180
           +G  G +PSN+V  
Sbjct: 66  DGQRGLVPSNFVDF 79

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A Length = 230

 Score = 62.6 bits (151), Expect = 3e-11
 Identities = 19/60 (31%), Positives = 29/60 (48%)

Query: 121 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           +    + V AL+ F   +  DL  +KG    + D  +E WW  +D  G  G IP  YV++
Sbjct: 132 RQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 191

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A Length = 230

 Score = 56.1 bits (134), Expect = 4e-09
 Identities = 27/144 (18%), Positives = 49/144 (34%), Gaps = 9/144 (6%)

Query: 250 ILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYH 308
             E+  +WY G +SRQ A ++L Q  + G F+VR+S ++ G Y LS+        V HY 
Sbjct: 8   DSEERSSWYWGRLSRQEAVALL-QGQRHGVFLVRDSSTSPGDYVLSVSEN---SRVSHYI 63

Query: 309 IKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIK 368
           I  +              + P          + +     L  L  + K+ +         
Sbjct: 64  INSSGPRPPVPP----SPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEP 119

Query: 369 QNSRGEFFLSEKHCCHSIPEVVNY 392
            +   +          +      +
Sbjct: 120 VSRSRQGSGVILRQEEAEYVRALF 143

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A Length = 230

 Score = 48.3 bits (114), Expect = 2e-06
 Identities = 22/115 (19%), Positives = 33/115 (28%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEI 60
              G              G     L +  Q    +  L     IH     +L        
Sbjct: 65  NSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEPVSRSR 124

Query: 61  SFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
                  +    + V AL+ F   +  DL  +KG    + D  +E WW  +D  G
Sbjct: 125 QGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEG 179

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 64.9 bits (158), Expect = 3e-11
 Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 21/189 (11%)

Query: 320 SEKHCCHSIPEVK-DKEGCFVVRNSSTKGLYTLSLYTKVPHPH-VKHYHIKQNSRGEFFL 377
             ++   +I  ++  K+  F +   +  G    S   +   P  +     K+    +   
Sbjct: 61  KSRYTYTTIEGLRAGKQYEFRIIAENKHGQ---SKPCEPTAPVLIPGDERKRRRGYDVDE 117

Query: 378 SEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEEL 437
             K          NY  +        +      +PV        D ++I        EEL
Sbjct: 118 QGKIVRGKGTVSSNYDNYVF-----DIWKQYYPQPVEIKHDHVLDHYDIH-------EEL 165

Query: 438 GSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSK 493
           G+G FGVV R   R +  + A    M      ++   +E + M+ L+H  LV L+     
Sbjct: 166 GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED 225

Query: 494 HRPIYIVTD 502
              + ++ +
Sbjct: 226 DNEMVMIYE 234

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 63.4 bits (155), Expect = 3e-11
 Identities = 14/73 (19%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
           + E+LG G+FG+V R     S        +K     +    +E  ++   +H+N++ L+ 
Sbjct: 9   IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHE 68

Query: 490 VCSKHRPIYIVTD 502
                  + ++ +
Sbjct: 69  SFESMEELVMIFE 81

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 76

 Score = 58.1 bits (141), Expect = 3e-11
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
              +V A + FK     +LS+ KG    V    +  WW+    NG  G+ PSNYV+E
Sbjct: 9   HQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWEG-TLNGRTGWFPSNYVRE 64

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A Length = 69

 Score = 57.7 bits (140), Expect = 4e-11
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 124 RPKVVVALYPFKA-IEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSV-GYIPSNYVKE 180
           +     A Y F       +L L+KG    +  D    W   K  +GS  G++P+ Y+  
Sbjct: 1   KDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTP 59

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A Length = 69

 Score = 40.4 bits (95), Expect = 6e-05
 Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 1/46 (2%)

Query: 71  RPKVVVALYPFKA-IEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           +     A Y F       +L L+KG    +  D    W   K  +G
Sbjct: 1   KDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDG 46

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A Length = 62

 Score = 57.2 bits (139), Expect = 4e-11
 Identities = 15/53 (28%), Positives = 24/53 (45%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            +  Y + A+   +L++  G     +   QE  W   + NG  G  P N+VKE
Sbjct: 4   YIVEYDYDAVHDDELTIRVGEIIRNVKKLQEEGWLEGELNGRRGMFPDNFVKE 56

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A Length = 62

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 7/34 (20%), Positives = 14/34 (41%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
            +  Y + A+   +L++  G     +   QE  W
Sbjct: 4   YIVEYDYDAVHDDELTIRVGEIIRNVKKLQEEGW 37

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 57.7 bits (140), Expect = 4e-11
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           ++  ALY F+A +  +L+LEKG    + +  +E WW     NG  G+ P+ YV+E
Sbjct: 8   RLCKALYSFQARQDDELNLEKGDIVIIHEKKEEGWWFG-SLNGKKGHFPAAYVEE 61

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 41.2 bits (97), Expect = 4e-05
 Identities = 13/37 (35%), Positives = 22/37 (59%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
           ++  ALY F+A +  +L+LEKG    + +  +E WW 
Sbjct: 8   RLCKALYSFQARQDDELNLEKGDIVIIHEKKEEGWWF 44

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens} Length = 92

 Score = 58.2 bits (141), Expect = 4e-11
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 112 DKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVG 171
            + G  K  +  R +     + +      +L L+ G   EV+ + +E WW+    NG  G
Sbjct: 6   QQMGTNKRGERRRRRCQ-VAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGV-LNGKTG 63

Query: 172 YIPSNYVKE 180
             PSN++KE
Sbjct: 64  MFPSNFIKE 72

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens} Length = 92

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 71  RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
           R +     + +      +L L+ G   EV+ + +E WW+
Sbjct: 17  RRRRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWE 55

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens} Length = 58

 Score = 57.2 bits (139), Expect = 5e-11
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            +  + ++A    +L++  G     +      WW+    NG  G  P N+V+E
Sbjct: 4   AIVEFDYQAQHDDELTISVGEIITNIRKEDGGWWEG-QINGRRGLFPDNFVRE 55

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus} Length = 60

 Score = 57.2 bits (139), Expect = 5e-11
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             ALY + A +  +LS       +++ +    WW  +   G  G  P+NYV +
Sbjct: 8   CKALYAYDAQDTDELSFNANDIIDIIKEDPSGWWTGR-LRGKQGLFPNNYVTK 59

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus} Length = 60

 Score = 40.3 bits (95), Expect = 5e-05
 Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
             ALY + A +  +LS       +++ +    WW   ++ K G+
Sbjct: 8   CKALYAYDAQDTDELSFNANDIIDIIKEDPSGWWTGRLRGKQGL 51

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D Length = 60

 Score = 57.2 bits (139), Expect = 5e-11
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH-WWKVKDKNGSVGYIPSNYVKE 180
           V ALY +   E  +LS + G E   + +  E  W + +  +G +G  P+NYV+ 
Sbjct: 6   VRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEA 59

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A Length = 74

 Score = 57.3 bits (139), Expect = 5e-11
 Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQ-EHWWKVKDKNGSVGYIPSNYVKEKE 182
            +A Y FKA    +LS ++G   +V+++   ++W+K +  NG  G+IP NY++ K 
Sbjct: 12  AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAE-LNGKDGFIPKNYIEMKP 66

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A Length = 74

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQ-EHWWK 109
            +A Y FKA    +LS ++G   +V+++   ++W+K
Sbjct: 12  AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYK 47

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 57.4 bits (139), Expect = 6e-11
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           VVA+Y +   +  +LS ++GA   V+    + W++    NG  G  P NYV+ 
Sbjct: 20  VVAIYDYTKDKEDELSFQEGAIIYVIKKNDDGWYEGV-MNGVTGLFPGNYVES 71

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 41.2 bits (97), Expect = 4e-05
 Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
           VVA+Y +   +  +LS ++GA   V+    + W++  +    G+
Sbjct: 20  VVAIYDYTKDKEDELSFQEGAIIYVIKKNDDGWYEGVMNGVTGL 63

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus} Length = 93

 Score = 57.9 bits (140), Expect = 7e-11
 Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 4/58 (6%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH----WWKVKDKNGSVGYIPSNYVKE 180
           V  A Y F A+   ++S   G    +    Q+     W        + G IP+NYVK 
Sbjct: 19  VARAEYDFVAVSDEEISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKI 76

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 62.7 bits (153), Expect = 7e-11
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 433 LLEELGSGQFGVVRRGKWRG--------SIDVA-MMKEGTMSEDDFIEEAKVMTRLQHQN 483
           L E +G G F VVRR   R          +DVA       +S +D   EA +   L+H +
Sbjct: 28  LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87

Query: 484 LVQLYGVCSKHRPIYIVTD 502
           +V+L    S    +Y+V +
Sbjct: 88  IVELLETYSSDGMLYMVFE 106

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 74

 Score = 57.0 bits (138), Expect = 7e-11
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
                 AL  + A +   L+  K     V++  QE+WW   + +G  G+ P +YVK 
Sbjct: 9   ENLKAQALCSWTAKKDNHLNFSKHDIITVLEQ-QENWWFG-EVHGGRGWFPKSYVKI 63

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 74

 Score = 41.2 bits (97), Expect = 3e-05
 Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 3/48 (6%)

Query: 71  RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
                 AL  + A +   L+  K     V++  QE+WW   V    G 
Sbjct: 9   ENLKAQALCSWTAKKDNHLNFSKHDIITVLEQ-QENWWFGEVHGGRGW 55

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 62.0 bits (151), Expect = 8e-11
 Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 7/79 (8%)

Query: 430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKV--MTRLQHQNLVQL 487
           ++ LLE +G G++G V RG W+G  +VA+    +  E  +  E ++     L+H+N++  
Sbjct: 9   DITLLECVGKGRYGEVWRGSWQGE-NVAVKIFSSRDEKSWFRETELYNTVMLRHENILGF 67

Query: 488 YGVC----SKHRPIYIVTD 502
                        ++++T 
Sbjct: 68  IASDMTSRHSSTQLWLITH 86

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 6/50 (12%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKK 50
              GSL +YL+             L + + +  G+A+L  H  I     K
Sbjct: 88  HEMGSLYDYLQLTTLDT----VSCLRIVLSIASGLAHL--HIEIFGTQGK 131

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A Length = 58

 Score = 56.4 bits (137), Expect = 8e-11
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVK 179
             A Y + A E  +L+  +  +   ++   + WW    +K+GS G  PSNYV 
Sbjct: 3   ATAEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVS 55

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A Length = 58

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 7/35 (20%), Positives = 15/35 (42%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
             A Y + A E  +L+  +  +   ++   + WW 
Sbjct: 3   ATAEYDYDAAEDNELTFVENDKIINIEFVDDDWWL 37

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 57.0 bits (138), Expect = 9e-11
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 128 VVALYPFKAIEGGD-LSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYVK 179
              +Y F A  G + L++ +G    V + +    W + K+  G  G +P++YV+
Sbjct: 12  ARVMYDFAAEPGNNELTVTEGEIITVTNPNVGGGWLEGKNNKGEQGLVPTDYVE 65

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 75  VVALYPFKAIEGGD-LSLEKGAEYEVMD-DTQEHWWKVKDKNG 115
              +Y F A  G + L++ +G    V + +    W + K+  G
Sbjct: 12  ARVMYDFAAEPGNNELTVTEGEIITVTNPNVGGGWLEGKNNKG 54

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A Length = 58

 Score = 56.5 bits (137), Expect = 9e-11
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 127 VVVALYPFKA-IEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSV-GYIPSNYVKE 180
           +  A Y F       +L L+KG    +  +    W   K  +GS  G++P+ Y+K 
Sbjct: 2   MFEAAYDFPGSGSPSELPLKKGDVIYITREEPSGWSLGKLLDGSKEGWVPTAYMKP 57

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A Length = 58

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 74  VVVALYPFKA-IEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           +  A Y F       +L L+KG    +  +    W   K  +G
Sbjct: 2   MFEAAYDFPGSGSPSELPLKKGDVIYITREEPSGWSLGKLLDG 44

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A Length = 59

 Score = 56.5 bits (137), Expect = 9e-11
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           VV A + F+     +LS  KG    V    +  WW+    NG  G+ PSNYV+E
Sbjct: 6   VVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWE-GTHNGRTGWFPSNYVRE 58

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Length = 68

 Score = 56.5 bits (137), Expect = 9e-11
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
               + +      +L L+ G   EV+ + +E WW+    NG  G  PSN++KE
Sbjct: 10  CQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGV-LNGKTGMFPSNFIKE 61

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Length = 68

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 8/35 (22%), Positives = 16/35 (45%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
               + +      +L L+ G   EV+ + +E WW+
Sbjct: 10  CQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWE 44

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens} Length = 89

 Score = 57.2 bits (138), Expect = 1e-10
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 5/57 (8%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ-----EHWWKVKDKNGSVGYIPSNYV 178
           V  A++ ++A    +L+L +G   +V+         E WW  +  +G VG  PSNYV
Sbjct: 31  VWTAVFDYEAAGDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVFPSNYV 87

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus} Length = 71

 Score = 56.5 bits (137), Expect = 1e-10
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVKE 180
             +   A++ F      +L LE      V    +++W++    + G+ G  P+ Y  E
Sbjct: 5   HEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIE 62

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus} Length = 71

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 7/39 (17%), Positives = 16/39 (41%)

Query: 71  RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
             +   A++ F      +L LE      V    +++W++
Sbjct: 5   HEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYE 43

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 62.3 bits (152), Expect = 1e-10
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 15/128 (11%)

Query: 390 VNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLL-------------EE 436
           +++H H+S G+    +          TA  +     + P   +                E
Sbjct: 1   MHHHHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESE 60

Query: 437 LGSGQFGVVRRGKWRGSIDVAMMK--EGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKH 494
           LG G   +V R K +G+     +K  + T+ +     E  V+ RL H N+++L  +    
Sbjct: 61  LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETP 120

Query: 495 RPIYIVTD 502
             I +V +
Sbjct: 121 TEISLVLE 128

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus} Length = 152

 Score = 59.2 bits (143), Expect = 1e-10
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           +Y   ++   A  +L  E   G F++R+SS +   +TLS+ T       K+  I Q   G
Sbjct: 36  FYWSAVTGGEANLLLSAE-PAGTFLIRDSSDQRHFFTLSVKT---QSGTKNLRI-QXEGG 90

Query: 316 EFFL 319
            F L
Sbjct: 91  SFSL 94

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus} Length = 152

 Score = 45.4 bits (107), Expect = 6e-06
 Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 12/91 (13%)

Query: 334 KEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHS------- 385
             G F++R+SS +   +TLS+ T       K+  I Q   G F L               
Sbjct: 54  PAGTFLIRDSSDQRHFFTLSVKT---QSGTKNLRI-QXEGGSFSLQSDPRSTQPVPRFDX 109

Query: 386 IPEVVNYHRHNSGGLASRLKTSPCDRPVPAT 416
           + ++V+++        S  K +         
Sbjct: 110 VLKLVHHYMPPQALPGSTPKRAYYIYSGGEK 140

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 73

 Score = 56.6 bits (137), Expect = 1e-10
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWKVKDKNGSVGYIPSNYVKE 180
            VA Y F A +  +LSL +G    +       + WWK +  NG +G+ PS YV+E
Sbjct: 10  AVARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGE-TNGRIGWFPSTYVEE 63

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 73

 Score = 40.0 bits (94), Expect = 8e-05
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 4/46 (8%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMD--DTQEHWWK--VKDKNGI 116
            VA Y F A +  +LSL +G    +       + WWK     + G 
Sbjct: 10  AVARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGW 55

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A Length = 60

 Score = 56.4 bits (137), Expect = 1e-10
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWKVKDKNGSVGYIPSNYVK 179
            VALY F   E GDL   KG    ++  +     WW  +  NG  G  P+NYV+
Sbjct: 6   AVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGR-VNGREGIFPANYVE 58

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A Length = 60

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 4/46 (8%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWK--VKDKNGI 116
            VALY F   E GDL   KG    ++  +     WW   V  + GI
Sbjct: 6   AVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGI 51

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens} Length = 79

 Score = 56.9 bits (138), Expect = 1e-10
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 112 DKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVG 171
             +     D+M  P+   AL+ F      +L+ + G    ++    + W +     G+ G
Sbjct: 6   HHHHHHHMDRMAAPRAE-ALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGT-VRGATG 63

Query: 172 YIPSNYVK 179
             P ++VK
Sbjct: 64  IFPLSFVK 71

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens} Length = 79

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 66  PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
            D+M  P+   AL+ F      +L+ + G    ++    + W +  V+   GI
Sbjct: 13  MDRMAAPRAE-ALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGI 64

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A Length = 65

 Score = 56.1 bits (136), Expect = 1e-10
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           +    L+ +      +L L+ G   ++ ++ +E WW     N  +G  PSN+VKE
Sbjct: 8   RQCKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWSGT-LNNKLGLFPSNFVKE 61

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A Length = 65

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 7/37 (18%), Positives = 17/37 (45%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
           +    L+ +      +L L+ G   ++ ++ +E WW 
Sbjct: 8   RQCKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWS 44

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens} Length = 119

 Score = 57.8 bits (139), Expect = 1e-10
 Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGSVGYIPSNYVKEK 181
           + +  VA+Y F+      LSL+ G    + +     W++  +       G  P +++  K
Sbjct: 58  KERHGVAIYNFQGSGAPQLSLQIGDVVRIQETC-GDWYRGYLIKHKMLQGIFPKSFIHIK 116

Query: 182 EL 183
           E+
Sbjct: 117 EV 118

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens} Length = 119

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 71  RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
           + +  VA+Y F+      LSL+ G    + +     W++
Sbjct: 58  KERHGVAIYNFQGSGAPQLSLQIGDVVRIQETC-GDWYR 95

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 80

 Score = 56.3 bits (136), Expect = 2e-10
 Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 4/61 (6%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK----VKDKNGSVGYIPSNYVK 179
             ++      + A     LSL  G    ++      WW+     + K    G+ P+++VK
Sbjct: 6   SGEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVK 65

Query: 180 E 180
            
Sbjct: 66  L 66

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 80

 Score = 40.1 bits (94), Expect = 9e-05
 Identities = 7/39 (17%), Positives = 13/39 (33%)

Query: 71  RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
             ++      + A     LSL  G    ++      WW+
Sbjct: 6   SGEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQ 44

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens} Length = 65

 Score = 55.7 bits (135), Expect = 2e-10
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
              L+ +      +L L+ G   ++ ++ +E WW     N  +G  PSN+VKE
Sbjct: 4   CKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWSGT-LNNKLGLFPSNFVKE 55

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens} Length = 65

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 7/35 (20%), Positives = 16/35 (45%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
              L+ +      +L L+ G   ++ ++ +E WW 
Sbjct: 4   CKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWS 38

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 61.9 bits (151), Expect = 2e-10
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAMM-----KEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
           L EELG G F VVRR     +  + A M     K           EA++   L+H N+V+
Sbjct: 15  LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVR 74

Query: 487 LYGVCSKHRPIYIVTD 502
           L+   S+    Y++ D
Sbjct: 75  LHDSISEEGHHYLIFD 90

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A Length = 64

 Score = 55.3 bits (134), Expect = 3e-10
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
              VV A + F+     +LS  KG    V    +  WW+    NG  G+ PSNYV+E
Sbjct: 5   SQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWE-GTHNGRTGWFPSNYVRE 60

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} PDB: 2d1x_A Length = 65

 Score = 54.9 bits (133), Expect = 3e-10
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
            +ALY ++A    ++S +       ++   + WW+     G  G  P+NYV+ ++
Sbjct: 12  AIALYDYQAAGDDEISFDPDDIITNIEMIDDGWWR-GVCKGRYGLFPANYVELRQ 65

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} PDB: 2d1x_A Length = 65

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 7/35 (20%), Positives = 17/35 (48%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
            +ALY ++A    ++S +       ++   + WW+
Sbjct: 12  AIALYDYQAAGDDEISFDPDDIITNIEMIDDGWWR 46

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A Length = 64

 Score = 54.9 bits (133), Expect = 4e-10
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            +    L+P+      +L+  +G    ++  +  +  WWK +  NG  G  P N+  +
Sbjct: 6   KEYCRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGE-LNGKEGVFPDNFAVQ 62

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A Length = 64

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 9/49 (18%), Positives = 21/49 (42%), Gaps = 4/49 (8%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWK--VKDKNGI 116
            +    L+P+      +L+  +G    ++  +  +  WWK  +  K G+
Sbjct: 6   KEYCRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGELNGKEGV 54

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 60.3 bits (147), Expect = 4e-10
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 4/74 (5%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFIEEAKVMTRLQHQNLVQLY 488
            +E LGSG F  V   K R +    A+    K     +     E  V+ +++H+N+V L 
Sbjct: 13  FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72

Query: 489 GVCSKHRPIYIVTD 502
            +       Y+V  
Sbjct: 73  DIYESTTHYYLVMQ 86

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 55.0 bits (133), Expect = 4e-10
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 4/56 (7%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVM---DDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V ALY ++     +LS  +GA   ++   +   + +W+  + NG +G  PS  V+E
Sbjct: 11  VKALYDYEGQTDDELSFPEGAIIRILNKENQDDDGFWEG-EFNGRIGVFPSVLVEE 65

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A Length = 76

 Score = 55.0 bits (133), Expect = 4e-10
 Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGSVGYIPSNYVKE 180
           + + V  +Y  +A    +L+  +G    V  +  + WW   ++ +    G  P ++V  
Sbjct: 9   KVRRVKTIYDCQADNDDELTFIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHI 67

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A Length = 76

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 71  RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
           + + V  +Y  +A    +L+  +G    V  +  + WW 
Sbjct: 9   KVRRVKTIYDCQADNDDELTFIEGEVIIVTGEEDQEWWI 47

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A Length = 108

 Score = 55.9 bits (135), Expect = 4e-10
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 129 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGSVGYIPSNYVK 179
           + LY FKA +  +L+   G    +       W+  K   + G  G +P  +V 
Sbjct: 9   IVLYDFKAEKADELTTYVGENLFICAHHNCEWFIAKPIGRLGGPGLVPVGFVS 61

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A Length = 108

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 10/44 (22%), Positives = 17/44 (38%)

Query: 76  VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKP 119
           + LY FKA +  +L+   G    +       W+  K    +  P
Sbjct: 9   IVLYDFKAEKADELTTYVGENLFICAHHNCEWFIAKPIGRLGGP 52

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A Length = 64

 Score = 54.5 bits (132), Expect = 4e-10
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVK 179
           +   A+Y + A +  ++S   G     +    + W      + G  G +P+NY++
Sbjct: 7   RTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIE 61

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A Length = 64

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
           +   A+Y + A +  ++S   G     +    + W  
Sbjct: 7   RTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMY 43

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 72

 Score = 55.0 bits (133), Expect = 4e-10
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH-WWKVKDKNGSVGYIPSNYVKE 180
             ALY  KA    +LS   G  ++ +  +QE  W +    NG  G IP NYV+ 
Sbjct: 13  AKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEG-TLNGKTGLIPENYVEF 65

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae} Length = 54

 Score = 54.1 bits (131), Expect = 5e-10
 Identities = 12/52 (23%), Positives = 25/52 (48%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           + A+Y ++A    ++S++ G    V+       W   + +G  G  P++Y K
Sbjct: 3   MEAIYAYEAQGDDEISIDPGDIITVIRGDDGSGWTYGECDGLKGLFPTSYCK 54

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae} Length = 54

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 7/34 (20%), Positives = 16/34 (47%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
           + A+Y ++A    ++S++ G    V+       W
Sbjct: 3   MEAIYAYEAQGDDEISIDPGDIITVIRGDDGSGW 36

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 59.6 bits (143), Expect = 5e-10
 Identities = 20/63 (31%), Positives = 32/63 (50%)

Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV 178
           P      + V  LY F   +  DL  +KG    +++  +E WW  ++K+G VG IP  YV
Sbjct: 119 PTAEDNLEYVRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYV 178

Query: 179 KEK 181
           ++ 
Sbjct: 179 EKL 181

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 52.7 bits (125), Expect = 1e-07
 Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 5/126 (3%)

Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQ 311
              AWY+G +SRQ A++ L Q  + G F+VR+SST  G Y LS+        V HY I  
Sbjct: 10  DRSAWYMGPVSRQEAQTRL-QGQRHGMFLVRDSSTCPGDYVLSVSENS---RVSHYIINS 65

Query: 312 NSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNS 371
                F + ++   H    ++  +  ++   +  +                     + N 
Sbjct: 66  LPNRRFKIGDQEFDHLPALLEFYKIHYLDTTTLIEPAPRYPSPPMGSVSAPNLPTAEDNL 125

Query: 372 RGEFFL 377
                L
Sbjct: 126 EYVRTL 131

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 49.6 bits (117), Expect = 1e-06
 Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
            +      A +   L+LE G   +V        W+  + NG  G  P  +VK  +
Sbjct: 242 AIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEG-EVNGRKGLFPFTHVKIFD 295

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 40.4 bits (93), Expect = 9e-04
 Identities = 14/51 (27%), Positives = 24/51 (47%)

Query: 65  WPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
            P      + V  LY F   +  DL  +KG    +++  +E WW  ++K+G
Sbjct: 118 LPTAEDNLEYVRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDG 168

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 60.0 bits (146), Expect = 5e-10
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 10/78 (12%)

Query: 433 LLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNL 484
           + EELG G F VVRR   +          I+   +            EA++  +LQH N+
Sbjct: 33  VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARICRKLQHPNI 90

Query: 485 VQLYGVCSKHRPIYIVTD 502
           V+L+    +    Y+V D
Sbjct: 91  VRLHDSIQEESFHYLVFD 108

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens} Length = 70

 Score = 54.5 bits (132), Expect = 5e-10
 Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVK 179
            +A + F      ++S  KG    ++    E+W++         G  P  YV 
Sbjct: 10  AIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVD 62

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens} Length = 70

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 7/35 (20%), Positives = 16/35 (45%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
            +A + F      ++S  KG    ++    E+W++
Sbjct: 10  AIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYE 44

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 60.1 bits (146), Expect = 5e-10
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVA---MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLY 488
           +LEELGSG FGVV R   + +        +     + +     E  +M +L H  L+ L+
Sbjct: 55  ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLH 114

Query: 489 GVCSKHRPIYIVTD 502
                   + ++ +
Sbjct: 115 DAFEDKYEMVLILE 128

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae} Length = 73

 Score = 54.6 bits (132), Expect = 6e-10
 Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK-NGSVGYIPSNYVKE 180
            VALY F+     +L L +G    +     + W   +++     G +P  +V  
Sbjct: 8   AVALYDFEPENDNELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSY 61

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae} Length = 73

 Score = 37.3 bits (87), Expect = 7e-04
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
            VALY F+     +L L +G    +     + W   ++++G
Sbjct: 8   AVALYDFEPENDNELRLAEGDIVFISYKHGQGWLVAENESG 48

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A Length = 61

 Score = 54.1 bits (131), Expect = 6e-10
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V AL+ +KA    +L+  K A  + ++     WW+         + PSNYV+E
Sbjct: 6   VKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE 58

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A Length = 61

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
           V AL+ +KA    +L+  K A  + ++     WW+
Sbjct: 6   VKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWR 40

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A Length = 73

 Score = 54.2 bits (131), Expect = 7e-10
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             ALY F+    G+L  ++G    + +   E+W++    +G  G+ P NYV+ 
Sbjct: 10  CRALYDFEPENEGELGFKEGDIITLTNQIDENWYEGM-LHGHSGFFPINYVEI 61

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A Length = 73

 Score = 40.3 bits (95), Expect = 7e-05
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
             ALY F+    G+L  ++G    + +   E+W++  +   +G 
Sbjct: 10  CRALYDFEPENEGELGFKEGDIITLTNQIDENWYEGMLHGHSGF 53

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A Length = 60

 Score = 54.1 bits (131), Expect = 7e-10
 Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 122 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           +I+     AL+ F      +L+ + G    ++    + W +     G+ G  P ++VK 
Sbjct: 1   LIKHMRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGT-VRGATGIFPLSFVKI 58

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A Length = 60

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 69  MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
           +I+     AL+ F      +L+ + G    ++    + W +  V+   GI
Sbjct: 1   LIKHMRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGI 50

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae} Length = 59

 Score = 53.7 bits (130), Expect = 7e-10
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK-NGSVGYIPSNYVKEKE 182
           +  VALY F+     +L L +G    +     + W   +++     G +P  +V   +
Sbjct: 2   QRAVALYDFEPENDNELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQ 59

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus} Length = 68

 Score = 54.1 bits (131), Expect = 8e-10
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             AL  ++    GDL   KG    +     E+W++ +  NG  G  P++ V+ 
Sbjct: 10  AKALCNYRGKNPGDLKFNKGDVILLRRQLDENWYQGE-INGVSGIFPASSVEV 61

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus} Length = 68

 Score = 39.9 bits (94), Expect = 7e-05
 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
             AL  ++    GDL   KG    +     E+W++  +   +GI
Sbjct: 10  AKALCNYRGKNPGDLKFNKGDVILLRRQLDENWYQGEINGVSGI 53

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 58.7 bits (143), Expect = 8e-10
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM-----MKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
           + EELG G F VVRR   + + ++ A       K           EA++  +LQH N+V+
Sbjct: 10  VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVR 69

Query: 487 LYGVCSKHRPIYIVTD 502
           L+    +    Y+V D
Sbjct: 70  LHDSIQEESFHYLVFD 85

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 58.7 bits (143), Expect = 8e-10
 Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 10/80 (12%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM---------MKEGTMSEDDFIEEAKVMTRLQHQ 482
           + EELGSGQF +VR+ + +G+  + A               +S ++   E  ++  ++H 
Sbjct: 9   MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHP 68

Query: 483 NLVQLYGVCSKHRPIYIVTD 502
           N++ L+ +      + ++ +
Sbjct: 69  NIITLHDIFENKTDVVLILE 88

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A Length = 58

 Score = 53.7 bits (129), Expect = 9e-10
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
               + + A    +LSL  G+   VM+   + WW+    NG +G+ PSNYV E
Sbjct: 4   AFVXFAYVAEREDELSLVXGSRVTVMEXCSDGWWR-GSYNGQIGWFPSNYVLE 55

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A* Length = 62

 Score = 53.3 bits (129), Expect = 1e-09
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVKE 180
           +   A++ F      +L LE      V    +++W++    + G+ G  P+ Y  E
Sbjct: 4   QTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIE 59

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 53.8 bits (130), Expect = 1e-09
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 4/56 (7%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQ---EHWWKVKDKNGSVGYIPSNYVKE 180
             ALY        +L+  +G    +++      E WWK    +G  G  P+N ++ 
Sbjct: 10  ARALYDNCPDCSDELAFSRGDILTILEQHVPESEGWWKCL-LHGRQGLAPANRLQI 64

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 3/38 (7%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQ---EHWWK 109
             ALY        +L+  +G    +++      E WWK
Sbjct: 10  ARALYDNCPDCSDELAFSRGDILTILEQHVPESEGWWK 47

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 59.3 bits (144), Expect = 1e-09
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM-----MKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
           ++  LG G FG V + K R +  + A+                + E +++ +L H N+++
Sbjct: 26  IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85

Query: 487 LYGVCSKHRPIYIVTD 502
           L+ +       YIV +
Sbjct: 86  LFEILEDSSSFYIVGE 101

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 70

 Score = 53.4 bits (129), Expect = 1e-09
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWKVKDKNGSVGYIPSNYVKE 180
              ++P++A    +L++++G    ++  D     WW+ +  NG  G  P N+VK 
Sbjct: 10  CKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGE-LNGRRGVFPDNFVKL 63

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 70

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 8/46 (17%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWK--VKDKNGI 116
              ++P++A    +L++++G    ++  D     WW+  +  + G+
Sbjct: 10  CKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGV 55

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 59.3 bits (144), Expect = 1e-09
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM-----MKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
            +++LGSG +G V   + + + ++ A+         T S    +EE  V+  L H N+++
Sbjct: 41  RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMK 100

Query: 487 LYGVCSKHRPIYIVTD 502
           LY      R  Y+V +
Sbjct: 101 LYDFFEDKRNYYLVME 116

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A Length = 67

 Score = 53.4 bits (129), Expect = 1e-09
 Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVK 179
            +A + F      ++S  KG    ++    E+W++         G  P  YV 
Sbjct: 9   AIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVD 61

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A Length = 67

 Score = 39.9 bits (94), Expect = 8e-05
 Identities = 7/35 (20%), Positives = 16/35 (45%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
            +A + F      ++S  KG    ++    E+W++
Sbjct: 9   AIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYE 43

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 81

 Score = 53.9 bits (130), Expect = 1e-09
 Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 3/67 (4%)

Query: 115 GIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEV--MDDTQEHWWKVKDKNGSVGY 172
           G+    +    +    LY + A    +LSL       V  +      W   + +    G 
Sbjct: 7   GLNDLKESSNNRKARVLYDYDAANSTELSLLADEVITVFSVVGMDSDWLMGE-RGNQKGK 65

Query: 173 IPSNYVK 179
           +P  Y++
Sbjct: 66  VPITYLE 72

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus} Length = 73

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             ALY F+    G+L   +G    + +   E+W++    +G  G+ P +YV+ 
Sbjct: 16  CKALYDFEPENDGELGFREGDLITLTNQIDENWYEGM-LHGQSGFFPLSYVQV 67

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus} Length = 73

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 65  WPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
           +   + +P    ALY F+    G+L   +G    + +   E+W++  +  ++G 
Sbjct: 7   FMPPLDQPSCK-ALYDFEPENDGELGFREGDLITLTNQIDENWYEGMLHGQSGF 59

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A Length = 71

 Score = 53.1 bits (128), Expect = 2e-09
 Identities = 16/53 (30%), Positives = 27/53 (50%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V AL+ +KA    +L+  K A  + ++  +  WW+         + PSNYV+E
Sbjct: 9   VKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEE 61

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A Length = 71

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
           V AL+ +KA    +L+  K A  + ++  +  WW+
Sbjct: 9   VKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWR 43

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 93

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWKVKDKNGSVGYIPSNYVKE 180
                ALYPF+A    ++S   G   +V + T     W       G+ G+ P NYV++
Sbjct: 5   SSGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGS-FQGNFGWFPCNYVEK 61

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 58.6 bits (142), Expect = 2e-09
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 4/77 (5%)

Query: 430 ELMLLEELGSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFIEEAKVMTRLQHQNLV 485
            +   E LG G+FG V + +   + + +A       G   +++   E  VM +L H NL+
Sbjct: 90  TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149

Query: 486 QLYGVCSKHRPIYIVTD 502
           QLY        I +V +
Sbjct: 150 QLYDAFESKNDIVLVME 166

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus} Length = 77

 Score = 52.9 bits (127), Expect = 2e-09
 Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 1/47 (2%)

Query: 136 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
           A+   +++++KG    +++ T + WWKV+  N   G++P+ YVK+ +
Sbjct: 2   AMGPREVTMKKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKKLD 47

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 58.0 bits (141), Expect = 2e-09
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 10/80 (12%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM---------MKEGTMSEDDFIEEAKVMTRLQHQ 482
             EELGSGQF VV++ + + + +  A               +S +D   E  ++  +QH 
Sbjct: 15  TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74

Query: 483 NLVQLYGVCSKHRPIYIVTD 502
           N++ L+ V      + ++ +
Sbjct: 75  NVITLHEVYENKTDVILILE 94

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 58.0 bits (141), Expect = 2e-09
 Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 10/80 (12%)

Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSED--DFIEEAKVMTRLQHQ 482
           + EELGSGQF +V++ + + +        I     +         +   E  ++ ++ H 
Sbjct: 16  IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75

Query: 483 NLVQLYGVCSKHRPIYIVTD 502
           N++ L+ V      + ++ +
Sbjct: 76  NVITLHDVYENRTDVVLILE 95

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens} Length = 73

 Score = 53.1 bits (128), Expect = 2e-09
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWKVKDKNGSVGYIPSNYVKE 180
                  ++P++A    +L++++G    ++  D     WW+  + NG  G  P N+VK 
Sbjct: 8   SKDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWE-GELNGRRGVFPDNFVKL 65

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens} Length = 73

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 7/41 (17%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 71  RPKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWK 109
                  ++P++A    +L++++G    ++  D     WW+
Sbjct: 8   SKDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWE 48

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens} Length = 69

 Score = 52.7 bits (127), Expect = 2e-09
 Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 4/57 (7%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVM---DDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           +  ALY   A    +LS  KG    V+       + WW     +G  G +P N +K 
Sbjct: 5   LAKALYDNVAESPDELSFRKGDIMTVLEQDTQGLDGWWLCS-LHGRQGIVPGNRLKI 60

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens} Length = 69

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 74  VVVALYPFKAIEGGDLSLEKGAEYEVM---DDTQEHWWK--VKDKNGI 116
           +  ALY   A    +LS  KG    V+       + WW   +  + GI
Sbjct: 5   LAKALYDNVAESPDELSFRKGDIMTVLEQDTQGLDGWWLCSLHGRQGI 52

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 57.2 bits (139), Expect = 2e-09
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 11/78 (14%)

Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDDFIEEAKVMTRLQHQNL 484
              +LGSG FG V   + R S        I+    +      +    E +V+  L H N+
Sbjct: 26  FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV---PMEQIEAEIEVLKSLDHPNI 82

Query: 485 VQLYGVCSKHRPIYIVTD 502
           ++++ V   +  +YIV +
Sbjct: 83  IKIFEVFEDYHNMYIVME 100

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens} Length = 65

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKEL 183
               + F+A    +L+L+KG    +  +  ++W +  + +G +G  P+NYV+   L
Sbjct: 4   ARLKFDFQAQSPKELTLQKGDIVYIHKEVDKNWLE-GEHHGRLGIFPANYVEVLPL 58

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens} Length = 65

 Score = 37.6 bits (88), Expect = 4e-04
 Identities = 7/35 (20%), Positives = 17/35 (48%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK 109
               + F+A    +L+L+KG    +  +  ++W +
Sbjct: 4   ARLKFDFQAQSPKELTLQKGDIVYIHKEVDKNWLE 38

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 57.2 bits (139), Expect = 3e-09
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM-----MKEGTMSEDDFIEEAKVMTRLQHQNLVQ 486
           ++  LG G FG V + K R +  + A+                + E +++ +L H N+++
Sbjct: 26  IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85

Query: 487 LYGVCSKHRPIYIVTD 502
           L+ +       YIV +
Sbjct: 86  LFEILEDSSSFYIVGE 101

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 57.2 bits (139), Expect = 3e-09
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFIEEAKVMTRLQHQNLVQLY 488
           L   +G G +G V+    +G+ I  A     K      D F +E ++M  L H N+++LY
Sbjct: 13  LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 72

Query: 489 GVCSKHRPIYIVTD 502
                +  IY+V +
Sbjct: 73  ETFEDNTDIYLVME 86

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 52.7 bits (127), Expect = 3e-09
 Identities = 9/54 (16%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVKE 180
           V     F A +  +++L++     V+   ++ W    + ++G  G+ P ++ + 
Sbjct: 20  VEITKAFFAKQADEVTLQQADVVLVL-QQEDGWLYGERLRDGETGWFPEDFARF 72

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens} Length = 68

 Score = 52.2 bits (126), Expect = 3e-09
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 122 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           M +P     LY F+    G+L  ++G    + +   E+W++    +G  G+ P NYV+ 
Sbjct: 1   MDQPCCR-GLYDFEPENQGELGFKEGDIITLTNQIDENWYEGM-IHGESGFFPINYVEV 57

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens} Length = 68

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 11/50 (22%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 69  MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK--VKDKNGI 116
           M +P     LY F+    G+L  ++G    + +   E+W++  +  ++G 
Sbjct: 1   MDQPCCR-GLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGF 49

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 57.7 bits (140), Expect = 3e-09
 Identities = 15/80 (18%), Positives = 37/80 (46%), Gaps = 10/80 (12%)

Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMK--EGTMSEDDFIEEAKVMTRLQHQ 482
           + EELGSGQF +V++ + + +        I     +     +  ++   E  ++ ++ H 
Sbjct: 16  IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHP 75

Query: 483 NLVQLYGVCSKHRPIYIVTD 502
           N++ L+ V      + ++ +
Sbjct: 76  NIITLHDVYENRTDVVLILE 95

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 58.2 bits (141), Expect = 3e-09
 Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM------MKEGTMSEDDFIEEAKVMTRLQHQNLV 485
               LG G FG V   K + +  + A+        +    ++  + E +++ +L H N++
Sbjct: 30  GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89

Query: 486 QLYGVCSKHRPIYIVTD 502
           +LY         Y+V +
Sbjct: 90  KLYEFFEDKGYFYLVGE 106

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A Length = 69

 Score = 51.9 bits (125), Expect = 4e-09
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWKVKDKNGSVGYIPSNYVKE 180
                 ++P++A    +L++++G    ++  D     WW+  + NG  G  P N+VK 
Sbjct: 2   SDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWE-GELNGRRGVFPDNFVKL 58

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A Length = 69

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 8/49 (16%), Positives = 23/49 (46%), Gaps = 4/49 (8%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWK--VKDKNGI 116
                 ++P++A    +L++++G    ++  D     WW+  +  + G+
Sbjct: 2   SDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGV 50

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1 Length = 72

 Score = 52.0 bits (125), Expect = 4e-09
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 3/60 (5%)

Query: 124 RPKVVVALYPFKAIEGGD-LSLEKGAEYEVMDDTQEH-WWK-VKDKNGSVGYIPSNYVKE 180
             + V  ++P  A      LS  +G    ++   ++  W     D   + G+ PS+Y K 
Sbjct: 6   SGQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKL 65

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 51.6 bits (124), Expect = 6e-09
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 125 PKVVVALYPFKAIEG-------GDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNY 177
            + +VALY +   E         +L+   G    V  +  E  +   + NG  G +PSN+
Sbjct: 7   GRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDEDGFYYGELNGQKGLVPSNF 66

Query: 178 VKE 180
           ++E
Sbjct: 67  LEE 69

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 85

 Score = 52.1 bits (125), Expect = 6e-09
 Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 3/55 (5%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEV--MDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V+AL  +       LS  +G   ++  +   +  W       G  G  P++ V+ 
Sbjct: 11  VIALRSYITDNCSLLSFHRGDLIKLLPVATLEPGWQFGS-AGGRSGLFPADIVQP 64

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 85

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 8/46 (17%), Positives = 18/46 (39%), Gaps = 4/46 (8%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEV--MDDTQEHWWK--VKDKNGI 116
           V+AL  +       LS  +G   ++  +   +  W       ++G+
Sbjct: 11  VIALRSYITDNCSLLSFHRGDLIKLLPVATLEPGWQFGSAGGRSGL 56

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 56.8 bits (137), Expect = 6e-09
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 9/79 (11%)

Query: 433 LLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSE-DDFIEEAKVMTRLQHQN 483
           L   +G G +GVVR               ++   +++    + +    E ++M +L H N
Sbjct: 30  LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPN 89

Query: 484 LVQLYGVCSKHRPIYIVTD 502
           + +LY V    + I +V +
Sbjct: 90  IARLYEVYEDEQYICLVME 108

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A Length = 73

 Score = 51.6 bits (124), Expect = 7e-09
 Identities = 12/66 (18%), Positives = 18/66 (27%), Gaps = 1/66 (1%)

Query: 115 GIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIP 174
           G            V   +     +   L L+KG   +++       W     N  VG   
Sbjct: 1   GSSGSSGFCGRARVHTDFTPSPYDTDSLKLKKGDIIDIISKPPMGTWMGL-LNNKVGTFK 59

Query: 175 SNYVKE 180
             YV  
Sbjct: 60  FIYVDV 65

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A Length = 62

 Score = 50.9 bits (122), Expect = 8e-09
 Identities = 13/52 (25%), Positives = 30/52 (57%)

Query: 113 KNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 164
              ++K D     ++V+ALY ++     +++++KG    +++ T + WWKV+
Sbjct: 9   AAYVKKLDSGTGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE 60

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A Length = 62

 Score = 50.5 bits (121), Expect = 1e-08
 Identities = 13/63 (20%), Positives = 34/63 (53%), Gaps = 5/63 (7%)

Query: 49  KKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW 108
           ++   P++     ++   D     ++V+ALY ++     +++++KG    +++ T + WW
Sbjct: 3   RQGFVPAA-----YVKKLDSGTGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWW 57

Query: 109 KVK 111
           KV+
Sbjct: 58  KVE 60

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 58

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVK-DKNGSVGYIPSNYVK 179
              LY +   +  ++++  G +  ++  DT   W K+  D  G  G +P+ Y++
Sbjct: 4   NKVLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR 57

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 55.9 bits (135), Expect = 2e-08
 Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 17/87 (19%)

Query: 433 LLEELGSGQFGVVRRG-----------------KWRGSIDVAMMKEGTMSEDDFIEEAKV 475
            + +LGSG +G V                    ++         K      ++   E  +
Sbjct: 40  KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL 99

Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +  L H N+++L+ V    +  Y+VT+
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTE 126

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 50.5 bits (121), Expect = 2e-08
 Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 7/64 (10%)

Query: 124 RPKVVVALYPFKAIEG-------GDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
             K+++A   +   +G       G L+L  G    V     +  +   +  G  G +P++
Sbjct: 6   SGKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAH 65

Query: 177 YVKE 180
            +  
Sbjct: 66  LLDH 69

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens} Length = 67

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 121 QMIRPKVVVALYPFKAIEGGD-LSLEKGAEYEVM-DDTQEHWWK-VKDKNGSVGYIPSNY 177
             ++ + V  ++P  A      LS  +G    ++  + ++ W     D + + G+ PS+Y
Sbjct: 2   SHMKKQKVKTIFPHTAGSNKTLLSFAQGDVITLLIPEEKDGWLYGEHDVSKARGWFPSSY 61

Query: 178 VK 179
            K
Sbjct: 62  TK 63

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus} Length = 142

 Score = 52.0 bits (124), Expect = 2e-08
 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGSVGYIPSNYVKE 180
             A Y F A +  +LSL++G   ++++   Q+ WW+  +  G +G+ PSNYV+E
Sbjct: 8   AKARYDFCARDRSELSLKEGDIIKILNKKGQQGWWR-GEIYGRIGWFPSNYVEE 60

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus} Length = 142

 Score = 39.3 bits (91), Expect = 6e-04
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWK--VKDKNGI 116
             A Y F A +  +LSL++G   ++++   Q+ WW+  +  + G 
Sbjct: 8   AKARYDFCARDRSELSLKEGDIIKILNKKGQQGWWRGEIYGRIGW 52

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 88

 Score = 50.6 bits (121), Expect = 2e-08
 Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 3/64 (4%)

Query: 119 PDQMIRPKVVVAL--YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSN 176
           P     P    A+      A +   L+LE G   +V        W+ +  NG  G  P  
Sbjct: 10  PSTQNGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGE-VNGRKGLFPFT 68

Query: 177 YVKE 180
           +VK 
Sbjct: 69  HVKI 72

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens} Length = 67

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 3/58 (5%)

Query: 125 PKVVVALYPF--KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           P     +      A +   L+LE G   +V        W+ +  NG  G+ P  +V+ 
Sbjct: 6   PIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGE-CNGKRGHFPFTHVRL 62

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens} Length = 118

 Score = 50.9 bits (121), Expect = 3e-08
 Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 5/84 (5%)

Query: 251 LEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPH-VKHYH 308
           LE P       +SR  A+ +L++  + G  ++R S       +++        H V+HY 
Sbjct: 19  LETP--SCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYK 76

Query: 309 IKQNSRGEFFLSEK-HCCHSIPEV 331
           +K+         E+   C S+  V
Sbjct: 77  VKREGPKYVIDVEQPFSCTSLDAV 100

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens} Length = 118

 Score = 43.6 bits (102), Expect = 1e-05
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 334 KEGCFVVRNSST-KGLYTLSLYTKVPHPH-VKHYHIKQNSRGEFFLSEK-HCCHSIPEVV 390
           + G  ++R S       +++        H V+HY +K+         E+   C S+  VV
Sbjct: 42  ECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAVV 101

Query: 391 NYHRHNSGGL 400
           NY   ++   
Sbjct: 102 NYFVSHTKKA 111

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1 Length = 63

 Score = 49.3 bits (118), Expect = 3e-08
 Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)

Query: 140 GDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            +++++KG    +++ T + WWKV+  N   G++P+ YVK+
Sbjct: 4   REVTMKKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKK 43

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1 Length = 63

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 8/58 (13%)

Query: 87  GDLSLEKGAEYEVMDDTQEHWWKVK--DKNGI------RKPDQMIRPKVVVALYPFKA 136
            +++++KG    +++ T + WWKV+  D+ G       +K D     ++V+ALY ++ 
Sbjct: 4   REVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSGTGKELVLALYDYQE 61

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 53.8 bits (130), Expect = 4e-08
 Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 7/75 (9%)

Query: 435 EELGSGQFGVVRRGKWRGS-IDVAM-----MKEGTMSEDDFIEEAKVMTRLQHQ-NLVQL 487
           +ELG G+F VVR+   + +  + A       + G     + + E  V+   +    ++ L
Sbjct: 35  KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94

Query: 488 YGVCSKHRPIYIVTD 502
           + V      I ++ +
Sbjct: 95  HEVYENTSEIILILE 109

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} Length = 67

 Score = 48.9 bits (117), Expect = 5e-08
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 125 PKVVVALYPFKAIEGGD-LSLEKGAEYEVM-DDTQEHWWK-VKDKNGSVGYIPSNYVK 179
              V A++   A +    LS ++G    ++  + ++ W     +K    G+ P +Y +
Sbjct: 7   RMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPFSYTR 64

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1 Length = 78

 Score = 49.2 bits (117), Expect = 6e-08
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 7/71 (9%)

Query: 117 RKPDQMIRPKVVV-----ALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKD-KNGS 169
           +K +++  PK+ V      + P     GG L L  G   E+   + + +WW+ ++     
Sbjct: 5   KKRNELGLPKMEVFQEYYGIPPPPGAFGGFLRLNPGDIVELTKAEAEHNWWEGRNTATNE 64

Query: 170 VGYIPSNYVKE 180
           VG+ P N V  
Sbjct: 65  VGWFPCNRVHP 75

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 94

 Score = 49.0 bits (117), Expect = 9e-08
 Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 5/60 (8%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH----WWK-VKDKNGSVGYIPSNYVKE 180
           + +  +YP+      +L L  G    +    Q      W        G  G +P NY+ +
Sbjct: 17  ETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITK 76

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens} Length = 486

 Score = 53.2 bits (126), Expect = 1e-07
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 108 WKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH-WWKVKDK 166
               D N             V ALY ++  E  +LS + G E   M+D  E  W K +  
Sbjct: 411 DANGDSNPFDDDATSGTEVRVRALYDYEGQEHDELSFKAGDELTKMEDEDEQGWCKGRLD 470

Query: 167 NGSVGYIPSNYVKEKE 182
           NG VG  P+NYV+  +
Sbjct: 471 NGQVGLYPANYVEAIQ 486

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A Length = 67

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            +      A +   L+LE G   +V        W+ +  NG  G  P  +VK 
Sbjct: 6   AIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGE-VNGRKGLFPFTHVKI 57

>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} Length = 184

 Score = 49.3 bits (117), Expect = 4e-07
 Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK--DKNGSVGYIPSNYVKEK 181
           + +  VA+Y F+      LSL+ G    + +     W++          G  P +++  K
Sbjct: 16  KERHGVAIYNFQGSGAPQLSLQIGDVVRIQETC-GDWYRGYLIKHKMLQGIFPKSFIHIK 74

Query: 182 E 182
           E
Sbjct: 75  E 75

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 50.3 bits (121), Expect = 5e-07
 Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 14/84 (16%)

Query: 433 LLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMS-----EDDFIEEAKVMTRL 479
             E LG G   VVRR   +          IDV      +        +  ++E  ++ ++
Sbjct: 21  PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 80

Query: 480 -QHQNLVQLYGVCSKHRPIYIVTD 502
             H N++QL      +   ++V D
Sbjct: 81  SGHPNIIQLKDTYETNTFFFLVFD 104

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B Length = 115

 Score = 47.4 bits (112), Expect = 5e-07
 Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 14/69 (20%)

Query: 128 VVALYPFKAIEGGDLSLEKG-----AEYEVMDDTQEHWWK---------VKDKNGSVGYI 173
           V A + + A +  +L L+ G       ++  ++  E W            K+     G  
Sbjct: 47  VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVF 106

Query: 174 PSNYVKEKE 182
           P N+ +  +
Sbjct: 107 PENFTERVQ 115

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 50.9 bits (122), Expect = 5e-07
 Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 13/83 (15%)

Query: 433 LLEELGSGQFGVVRRGKWRG--------SIDVAMMKEGTMSEDDFIE----EAKVMTRL- 479
             + +G G   VVRR   R          ++V   +      ++  E    E  ++ ++ 
Sbjct: 98  PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA 157

Query: 480 QHQNLVQLYGVCSKHRPIYIVTD 502
            H +++ L         +++V D
Sbjct: 158 GHPHIITLIDSYESSSFMFLVFD 180

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens} Length = 341

 Score = 50.8 bits (120), Expect = 5e-07
 Identities = 14/83 (16%), Positives = 28/83 (33%), Gaps = 2/83 (2%)

Query: 97  YEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT 156
             +                    D+M  P+   AL+ F      +L+ + G    ++   
Sbjct: 147 QALRRLRPRTRKVKSVSPQGNSVDRMAAPRAE-ALFDFTGNSKLELNFKAGDVIFLLSRI 205

Query: 157 QEHWWKVKDKNGSVGYIPSNYVK 179
            + W +     G+ G  P ++VK
Sbjct: 206 NKDWLEGT-VRGATGIFPLSFVK 227

>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 92

 Score = 46.5 bits (110), Expect = 8e-07
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 5/59 (8%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT----QEHWWKVKDKNGSVGYIPSNYVK 179
            K+  A   F A +  D+SL +G    V+        ++ W + D   + G++ S+++K
Sbjct: 17  EKLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLI-DNGVTKGFVYSSFLK 74

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens} Length = 83

 Score = 46.0 bits (109), Expect = 8e-07
 Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 6/58 (10%)

Query: 128 VVALYPFK-AIEGGDLSLEKGAEYEVMDDTQEHWWK-----VKDKNGSVGYIPSNYVK 179
           V AL  F    +   L++  G    V++   +  WK      +     +GY P   V+
Sbjct: 21  VRALKDFWNLHDPTALNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRIGYFPPGIVE 78

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 49.6 bits (119), Expect = 1e-06
 Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 5/87 (5%)

Query: 419 LSHDKWEIDPAEL-MLLEELGSGQFGVVRRGKWRGSIDVAMMK----EGTMSEDDFIEEA 473
             H + ++DP E+  ++ ELG G FG V + K + +  +A  K    +     +D+I E 
Sbjct: 8   YEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEI 67

Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIV 500
           +++    H  +V+L G       ++I+
Sbjct: 68  EILATCDHPYIVKLLGAYYHDGKLWIM 94

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 1e-06
 Identities = 70/506 (13%), Positives = 130/506 (25%), Gaps = 187/506 (36%)

Query: 38  LERHNY------IHRETKKSLYPSSLNEISFI-----LW-------PDQMIRPKVVV--- 76
           + R NY      I  E ++     S+    +I     L+          + R +  +   
Sbjct: 86  VLRINYKFLMSPIKTEQRQP----SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLR 141

Query: 77  -ALY-----PFKAIEG----G----------DLSLEKGAEYEVMDDTQEHWWKVK----- 111
            AL          I+G    G             ++   ++++       W  +K     
Sbjct: 142 QALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI------FWLNLKNCNSP 195

Query: 112 --------------DKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYE----VM 153
                         D N   + D     K         +I+     L K   YE    V+
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIK-----LRIHSIQAELRRLLKSKPYENCLLVL 250

Query: 154 DDTQEHW-WKV-----------KDKN-------GSVGYIPSNYVK----EKELLGL---- 186
            + Q    W             + K         +  +I  ++        E+  L    
Sbjct: 251 LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310

Query: 187 --QKYDD-------VNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK 237
              +  D        N   L +I + +      +  D W + V   ++ T  +     L+
Sbjct: 311 LDCRPQDLPREVLTTNPRRLSIIAESIR--DGLATWDNWKH-VNCDKLTTIIESSLNVLE 367

Query: 238 NTEVVDRVQRGIILEK----PKA-----WYVGDMSRQRAESILKQEDKEGCFVVRN--SS 286
             E      R  +       P       W   D+ +     ++ +  K    V +    S
Sbjct: 368 PAEYRKMFDRLSVFPPSAHIPTILLSLIW--FDVIKSDVMVVVNKLHKYSL-VEKQPKES 424

Query: 287 TKGLYTLSLYTKVPHPHVK--H--------------------------------YHIKQN 312
           T  + ++ L  KV   +    H                                +H+K  
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI 484

Query: 313 SRGE----F--------FLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHP 360
              E    F        FL +K        ++     +    S    L  L  Y      
Sbjct: 485 EHPERMTLFRMVFLDFRFLEQK--------IRHDSTAWNASGSILNTLQQLKFYKPYICD 536

Query: 361 HVKHYHIKQNSRGEFFLS-EKHCCHS 385
           +   Y    N+  +F    E++   S
Sbjct: 537 NDPKYERLVNAILDFLPKIEENLICS 562

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Length = 283

 Score = 49.3 bits (117), Expect = 1e-06
 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 117 RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPS 175
                M     ++A+  +K +E   +++ KG E +++   Q   WKV   +GS   +PS
Sbjct: 190 HPAHPMRGRLPLLAVCDYKQVE---VTVHKGDECQLVGPAQPSHWKVLSSSGSEAAVPS 245

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Length = 283

 Score = 41.6 bits (97), Expect = 4e-04
 Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 66  PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
              M     ++A+  +K +E   +++ KG E +++   Q   WKV   +G
Sbjct: 192 AHPMRGRLPLLAVCDYKQVE---VTVHKGDECQLVGPAQPSHWKVLSSSG 238

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A Length = 108

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 10/67 (14%)

Query: 128 VVALYPFKAIEGGDLSLEKGAE---YEVMDDTQEHWWKV-------KDKNGSVGYIPSNY 177
            VAL  + A +   L++ +G     +  +      +W          D    +GY PS+ 
Sbjct: 25  AVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSI 84

Query: 178 VKEKELL 184
           V+E + L
Sbjct: 85  VREDQTL 91

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 16/84 (19%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAMMKEGTMSEDDFIEEAKVMTRL 479
           +  +++D  +    + LG G F + R+   + S    A+       E +  +E   +   
Sbjct: 7   YQHYDLDLKD----KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLC 62

Query: 480 Q-HQNLVQLYGVCSKHRPIYIVTD 502
           + H N+V+L+ V       ++V +
Sbjct: 63  EGHPNIVKLHEVFHDQLHTFLVME 86

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 47.7 bits (114), Expect = 4e-06
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 10/77 (12%)

Query: 435 EELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDD---FIEEAKVMTRLQHQNLVQLY 488
            E+G G F  V +G    + ++VA   +++  +++ +   F EEA+++  LQH N+V+ Y
Sbjct: 32  IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 91

Query: 489 G----VCSKHRPIYIVT 501
                     + I +VT
Sbjct: 92  DSWESTVKGKKCIVLVT 108

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 47.9 bits (114), Expect = 4e-06
 Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 14/93 (15%)

Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFIE 471
           +   S+  W +        + LG G    V RG+ + +    A+        +   D   
Sbjct: 3   SQSTSNHLWLLS-------DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM 55

Query: 472 -EAKVMTRLQHQNLVQLYGV--CSKHRPIYIVT 501
            E +V+ +L H+N+V+L+ +   +  R   ++ 
Sbjct: 56  REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 47.4 bits (113), Expect = 5e-06
 Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 14/94 (14%)

Query: 415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFI 470
            +   S+  W +        + LG G    V RG+ + +    A+        +   D  
Sbjct: 2   GSQSTSNHLWLLS-------DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ 54

Query: 471 E-EAKVMTRLQHQNLVQLYGV--CSKHRPIYIVT 501
             E +V+ +L H+N+V+L+ +   +  R   ++ 
Sbjct: 55  MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 126

 Score = 44.7 bits (105), Expect = 5e-06
 Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 251 LEKPKAWYVGDMSRQRAESILKQED-----KEGCFVVRNSSTKGLYTLSLYTKVPHPHVK 305
           +  P + +V        E + K        ++G + +RNSSTK    L ++ +  +  V+
Sbjct: 13  VPLPNSVFVNTTESCEVERLFKATSPRGEPQDGLYCIRNSSTKSGKVLVVWDETSN-KVR 71

Query: 306 HYHIKQNSRGEFFLSEKHCCHSIPEV 331
           +Y I +    +F+L  +    S+  +
Sbjct: 72  NYRIFEK-DSKFYLEGEVLFVSVGSM 96

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 126

 Score = 40.1 bits (93), Expect = 3e-04
 Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 9/123 (7%)

Query: 296 YTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYT 355
           Y KVP P      +      E    E+    + P  + ++G + +RNSSTK    L ++ 
Sbjct: 10  YEKVPLP--NSVFVNTTESCE---VERLFKATSPRGEPQDGLYCIRNSSTKSGKVLVVWD 64

Query: 356 KVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN-YHRHNSGGLASRLKTSPCDRP-V 413
           +  +  V++Y I +    +F+L  +    S+  +V  YH H      S L   P      
Sbjct: 65  ETSN-KVRNYRIFEK-DSKFYLEGEVLFVSVGSMVEHYHTHVLPSHQSLLLRHPYGYTSG 122

Query: 414 PAT 416
           P++
Sbjct: 123 PSS 125

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 47.3 bits (113), Expect = 6e-06
 Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 14/116 (12%)

Query: 394 RHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS 453
           +          +  P     P     +   + I        +++G GQF  V R      
Sbjct: 4   QSQGMQGPPVPQFQPQKALRPDMGYNTLANFRI-------EKKIGRGQFSEVYRAACLLD 56

Query: 454 IDVAMMKE----GTMSE---DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
                +K+      M      D I+E  ++ +L H N+++ Y    +   + IV +
Sbjct: 57  GVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 112

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A Length = 70

 Score = 43.0 bits (101), Expect = 7e-06
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 7/62 (11%)

Query: 125 PKVVV-----ALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKD-KNGSVGYIPSNY 177
           PK+ V      + P     G  L L  G   E+   + + +WW+ ++     VG+ P N 
Sbjct: 5   PKMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNR 64

Query: 178 VK 179
           V 
Sbjct: 65  VH 66

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 46.9 bits (112), Expect = 8e-06
 Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 13/82 (15%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM-----------MKEGTMSEDDFIEEAKVMTRLQ 480
           + + LGSG  G V+    R +   VA+                    +   E +++ +L 
Sbjct: 14  MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73

Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
           H  ++++          YIV +
Sbjct: 74  HPCIIKIKNFFDAED-YYIVLE 94

>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} Length = 450

 Score = 47.4 bits (112), Expect = 8e-06
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 117 RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPS 175
               +  +P ++ AL  +K  +     + KG E  + D+ +   W V    G    +PS
Sbjct: 275 NPDYRSNKPIILRALCDYKQDQ---KIVHKGDECILKDNNERSKWYVTGPGGVDMLVPS 330

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 46.5 bits (111), Expect = 9e-06
 Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 435 EELGSGQFGVVRRGKWRGS-IDVAM---MKEGTMSEDDFIEEAKVMTRLQ-HQNLVQLYG 489
           + LG G    V+      +  + A+    K+          E +++ + Q H+N+++L  
Sbjct: 19  DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78

Query: 490 VCSKHRPIYIVTD 502
              +    Y+V +
Sbjct: 79  FFEEEDRFYLVFE 91

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 46.5 bits (111), Expect = 9e-06
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 420 SHDKWEIDPAEL-MLLEELGSGQFGVVRRGKWRGSIDVAMMK-----EGTMSEDDFIEEA 473
                + DP EL   LE++G G FG V +G    +  V  +K     E     +D  +E 
Sbjct: 12  GMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI 71

Query: 474 KVMTRLQHQNLVQLYGVCSKHRPIYIV 500
            V+++     + + YG   K   ++I+
Sbjct: 72  TVLSQCDSPYVTKYYGSYLKDTKLWII 98

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 46.9 bits (112), Expect = 9e-06
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAMMKEGTMSEDDFIEEAKVMTRL-QHQNLVQLYGV 490
           + E++G G + V +R   + + ++ A +K    S+ D  EE +++ R  QH N++ L  V
Sbjct: 26  VKEDIGVGSYSVCKRCIHKATNMEFA-VKIIDKSKRDPTEEIEILLRYGQHPNIITLKDV 84

Query: 491 CSKHRPIYIVTD 502
               + +Y+VT+
Sbjct: 85  YDDGKYVYVVTE 96

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 46.6 bits (111), Expect = 1e-05
 Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 22/119 (18%)

Query: 390 VNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGK 449
           +++H H+S G+         D         S +K+         L+++G G FG     K
Sbjct: 1   MHHHHHHSSGV---------DLGTENLYFQSMEKYVR-------LQKIGEGSFGKAILVK 44

Query: 450 WRGSIDVAMMKE---GTMSEDD---FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
                   ++KE     MS  +      E  V+  ++H N+VQ      ++  +YIV D
Sbjct: 45  STEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 46.6 bits (111), Expect = 1e-05
 Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 13/82 (15%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM-----------MKEGTMSEDDFIEEAKVMTRLQ 480
           + + LGSG  G V+    R +   VA+                    +   E +++ +L 
Sbjct: 139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 198

Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
           H  ++++          YIV +
Sbjct: 199 HPCIIKIKNFFDAED-YYIVLE 219

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 46.3 bits (110), Expect = 1e-05
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 9/73 (12%)

Query: 435 EELGSGQFG-VVRRGKWRGSIDVA---MMKEGTMSEDDFIEEAKVMTRL-QHQNLVQLYG 489
           + LG G  G +V RG +    DVA   ++ E          E +++    +H N+++ + 
Sbjct: 30  DVLGHGAEGTIVYRGMFDNR-DVAVKRILPE---CFSFADREVQLLRESDEHPNVIRYFC 85

Query: 490 VCSKHRPIYIVTD 502
                +  YI  +
Sbjct: 86  TEKDRQFQYIAIE 98

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 3/102 (2%)

Query: 402 SRLKTSPCDRPVPATAGLSHDKWEIDPAEL-MLLEELGSGQFGVVRRGKWRGSIDVAMMK 460
           S       + P      L  D     P E+  +LE+LG G +G V +   + +  +  +K
Sbjct: 1   SLETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIK 60

Query: 461 EGTMSED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV 500
           +  +  D  + I+E  +M +    ++V+ YG   K+  ++IV
Sbjct: 61  QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 12/81 (14%)

Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDDFIE----EAKVMTRLQ 480
            +  LGSG FG V     +          I    + E    ED  +     E  +++R++
Sbjct: 28  TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE 87

Query: 481 HQNLVQLYGVCSKHRPIYIVT 501
           H N++++  +        +V 
Sbjct: 88  HANIIKVLDIFENQGFFQLVM 108

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 9/73 (12%)

Query: 435 EELGSGQFG-VVRRGKWRGSIDVA---MMKEGTMSEDDFIEEAKVMTRL-QHQNLVQLYG 489
           + LG G  G VV +G ++G   VA   M+ +     D  + E K++T    H N+++ Y 
Sbjct: 21  KILGYGSSGTVVFQGSFQGR-PVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYC 76

Query: 490 VCSKHRPIYIVTD 502
             +  R +YI  +
Sbjct: 77  SETTDRFLYIALE 89

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 45.3 bits (108), Expect = 3e-05
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 437 LGSGQFGVVRRGKWRGSIDVA---MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVC 491
           +G G FG V +G  R    VA      E +   ++F  E + ++  +H +LV L G C
Sbjct: 47  IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 45.4 bits (108), Expect = 3e-05
 Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSED-----DFIEEAKVM 476
             W+    +L  L E+G G +G V +   + S  +  +K    + D       + +  V+
Sbjct: 15  QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV 74

Query: 477 TRL-QHQNLVQLYGVCSKHRPIYIVT---DTSSFRL 508
            R      +VQ YG   +    +I      TS  + 
Sbjct: 75  MRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKF 110

>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus} Length = 82

 Score = 41.5 bits (97), Expect = 3e-05
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH--WWKVKDKNGS---VGYIPSNYVK 179
            ++ V L  F A    +LS++ G   E+++   E   W  V+    S    G +PS+ + 
Sbjct: 17  CELTVVLQDFSAAHSSELSIQVGQTVELLERPSERPGWCLVRTTERSPPQEGLVPSSTLC 76

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 16/86 (18%)

Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVMTRLQHQNLVQLYG 489
            +  LG G FG V + +         +K+   +E+     + E  ++  L HQ +V+ Y 
Sbjct: 10  EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYA 69

Query: 490 V-------------CSKHRPIYIVTD 502
                           K   ++I  +
Sbjct: 70  AWLERRNFVKPMTAVKKKSTLFIQME 95

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 213

 Score = 44.3 bits (103), Expect = 3e-05
 Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 14/66 (21%)

Query: 128 VVALYPFKAIEGGDLSLEKG-----AEYEVMDDTQEHWWK---------VKDKNGSVGYI 173
           V A + + A +  +L L+ G       ++  ++  E W            K      G  
Sbjct: 145 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVF 204

Query: 174 PSNYVK 179
           P N+ +
Sbjct: 205 PENFTE 210

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 11/78 (14%)

Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAM-------MKEGTMSEDDFIEEAKVMTRLQHQNL- 484
           +L+++GSG    V +         A+           T+  D +  E   + +LQ  +  
Sbjct: 32  ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL--DSYRNEIAYLNKLQQHSDK 89

Query: 485 -VQLYGVCSKHRPIYIVT 501
            ++LY      + IY+V 
Sbjct: 90  IIRLYDYEITDQYIYMVM 107

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 44.9 bits (107), Expect = 3e-05
 Identities = 23/119 (19%), Positives = 48/119 (40%), Gaps = 16/119 (13%)

Query: 390 VNYHRHNSGGLASRLKTSPCDRPVPATAGLSH-DKWEIDPAELMLLEELGSGQFGVVRRG 448
           + +H H+  G        P    V A    +  D++         + +LG G +G V + 
Sbjct: 1   MAHHHHHHMGTLEAQTQGPGSMSVSAAPSATSIDRYRR-------ITKLGEGTYGEVYKA 53

Query: 449 KWR--GSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV 500
                    VA+ +     E++      I E  ++  LQH+N+++L  V   +  ++++
Sbjct: 54  IDTVTNET-VAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 8/78 (10%)

Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAMMKE---GTMSEDD---FIEEAKVMTRLQHQNLVQ 486
           +L  +G+G +G  ++ + +    + + KE   G+M+E +    + E  ++  L+H N+V+
Sbjct: 10  VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 69

Query: 487 LYG--VCSKHRPIYIVTD 502
            Y   +   +  +YIV +
Sbjct: 70  YYDRIIDRTNTTLYIVME 87

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 44.7 bits (106), Expect = 4e-05
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAM---MKEGTMSED--DFIEEAKVMTRLQHQNL--V 485
           +L+++GSG    V +         A+     E   ++    +  E   + +LQ  +   +
Sbjct: 13  ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 72

Query: 486 QLYGVCSKHRPIYIVT 501
           +LY      + IY+V 
Sbjct: 73  RLYDYEITDQYIYMVM 88

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 7/76 (9%)

Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRG--KWRGSIDVAM----MKEGTMSEDDFIEEA 473
           S   W I+  +  L E +GSG   VV+      +    VA+    +++   S D+ ++E 
Sbjct: 6   SALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEK-VAIKRINLEKCQTSMDELLKEI 64

Query: 474 KVMTRLQHQNLVQLYG 489
           + M++  H N+V  Y 
Sbjct: 65  QAMSQCHHPNIVSYYT 80

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 44.8 bits (106), Expect = 4e-05
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAM---MKEGTMSED--DFIEEAKVMTRLQHQNL--V 485
           +L+++GSG    V +         A+     E   ++    +  E   + +LQ  +   +
Sbjct: 60  ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 119

Query: 486 QLYGVCSKHRPIYIVT 501
           +LY      + IY+V 
Sbjct: 120 RLYDYEITDQYIYMVM 135

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} PDB: 2kt1_A Length = 90

 Score = 41.1 bits (96), Expect = 5e-05
 Identities = 19/83 (22%), Positives = 23/83 (27%), Gaps = 19/83 (22%)

Query: 119 PDQMIRPKVVVALYPFKAIEGGDLSLEKG---------------AEYEVMDDTQEHWWK- 162
                      ALYPF+     DL L  G               AE          W   
Sbjct: 5   SMAGPEGFQYRALYPFRRERPEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPG 64

Query: 163 VKDKNGSVGYIPSNYVKEKELLG 185
           + ++    G  P  YV   E LG
Sbjct: 65  LNERTRQRGDFPGTYV---EFLG 84

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 44.2 bits (105), Expect = 5e-05
 Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 8/74 (10%)

Query: 435 EELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-EDDFIEEAKVMTRL-QHQNLVQLYGVC- 491
           + LG G  G V +   + + +   +K   +        E ++  R  Q  ++V++  V  
Sbjct: 24  QVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKARREVELHWRASQCPHIVRIVDVYE 81

Query: 492 ---SKHRPIYIVTD 502
              +  + + IV +
Sbjct: 82  NLYAGRKCLLIVME 95

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 43.9 bits (104), Expect = 6e-05
 Identities = 16/84 (19%), Positives = 42/84 (50%), Gaps = 6/84 (7%)

Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDF---IEEAKVMT 477
           +++ +  +L  L E+GSG  G V + ++R +  V  +K+   + ++++    + +  V+ 
Sbjct: 19  RYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVL 78

Query: 478 RL-QHQNLVQLYGVCSKHRPIYIV 500
           +      +VQ +G    +  ++I 
Sbjct: 79  KSHDCPYIVQCFGTFITNTDVFIA 102

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 43.7 bits (104), Expect = 7e-05
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 437 LGSGQFGVVRRGKWRGSIDVA--MMKEGT--MSEDDFIEEAKVMTRLQHQNLVQLYGVCS 492
           LG G FG V +G+      VA   +KE      E  F  E ++++   H+NL++L G C 
Sbjct: 38  LGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D Length = 466

 Score = 44.2 bits (104), Expect = 8e-05
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 4/82 (4%)

Query: 113 KNGIRKPDQMIRPKVVV---ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGS 169
                  +++I    VV   AL+    ++  +L  + G   EVMD T   WW  +     
Sbjct: 15  GGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIEVMDATNREWWWGR-VADG 73

Query: 170 VGYIPSNYVKEKELLGLQKYDD 191
            G+ P+++V+ +        DD
Sbjct: 74  EGWFPASFVRLRVNQDEPADDD 95

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 17/56 (30%), Positives = 27/56 (48%)

Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
           +E +GSG FG V + K R      ++K    + +    E K + +L H N+V   G
Sbjct: 16  IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG 71

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 18/146 (12%)

Query: 365 YHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKW 424
           +H   +S G    +E     S+ ++        G  +  L++   D   P +       +
Sbjct: 2   HHHHHHSSGVDLGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPES--FFQQSF 59

Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWR--GSIDVAM--MKEGTMSEDD---FIEEAKVMT 477
           +        L  LG G +G V + + +  G +  A+           D    + E     
Sbjct: 60  QR-------LSRLGHGSYGEVFKVRSKEDGRL-YAVKRSMSPFRGPKDRARKLAEVGSHE 111

Query: 478 RL-QHQNLVQLYGVCSKHRPIYIVTD 502
           ++ QH   V+L     +   +Y+ T+
Sbjct: 112 KVGQHPCCVRLEQAWEEGGILYLQTE 137

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 7/73 (9%)

Query: 434 LEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSEDDF----IEEAKVMTRLQHQNLVQL 487
           L++LG G +  V +GK +   ++ VA+ +     E+      I E  ++  L+H N+V L
Sbjct: 7   LDKLGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL 65

Query: 488 YGVCSKHRPIYIV 500
           + +    + + +V
Sbjct: 66  HDIIHTEKSLTLV 78

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 7/73 (9%)

Query: 434 LEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSEDDF----IEEAKVMTRLQHQNLVQL 487
           LE+LG+G +  V +G  +  G   VA+ +    SE+      I E  +M  L+H+N+V+L
Sbjct: 10  LEKLGNGTYATVYKGLNKTTGVY-VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRL 68

Query: 488 YGVCSKHRPIYIV 500
           Y V      + +V
Sbjct: 69  YDVIHTENKLTLV 81

>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal transduction, transducer, transcription factor; HET: PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 1uus_A* Length = 473

 Score = 43.4 bits (101), Expect = 2e-04
 Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 2/78 (2%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG 315
              G M RQ     L+ +   G F++R S    G + ++         +KHY ++ N   
Sbjct: 353 IIYGYMGRQEVNDALQNQ-DPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTA 411

Query: 316 EFFLSEKHCCHSIPEVKD 333
               +         +  +
Sbjct: 412 AAKKTFPDFLSEHSQFVN 429

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 11/108 (10%)

Query: 393 HRHNSGGLASRLKTSPCDRPVPA------TAGLSHDKWEIDPAEL-MLLEELGSGQFGVV 445
           H H+       L T                A L     + DP  L     ++G G  G+V
Sbjct: 2   HHHHHHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIV 61

Query: 446 RRGKWRGSIDVAMMK----EGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
              + + S     +K          +    E  +M   QH N+V++Y 
Sbjct: 62  CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 8/82 (9%)

Query: 427 DPAEL-MLLEELGSGQFGVVRRGKWRGSIDVAMMK----EGTMSEDDF---IEEAKVMTR 478
           DP +L   L E+G G FG V   +   + +V  +K     G  S + +   I+E + + +
Sbjct: 51  DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 110

Query: 479 LQHQNLVQLYGVCSKHRPIYIV 500
           L+H N +Q  G   +    ++V
Sbjct: 111 LRHPNTIQYRGCYLREHTAWLV 132

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 26/116 (22%)

Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWR- 451
           H H+S G+    +              S +K+E        L  +G G +G+V + + + 
Sbjct: 5   HHHHSSGVDLGTENLYFQ---------SMEKYEN-------LGLVGEGSYGMVMKCRNKD 48

Query: 452 -GSIDVAMMKEGTMSEDD------FIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV 500
            G I VA+ K+   S+DD       + E K++ +L+H+NLV L  VC K +  Y+V
Sbjct: 49  TGRI-VAI-KKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 5/68 (7%)

Query: 427 DPAEL-MLLEELGSGQFGVVRRGKWRGSIDVAMMK----EGTMSEDDFIEEAKVMTRLQH 481
           DP +     E++G G  G V       +     ++    +    ++  I E  VM   ++
Sbjct: 17  DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 76

Query: 482 QNLVQLYG 489
            N+V    
Sbjct: 77  PNIVNYLD 84

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 20/123 (16%), Positives = 46/123 (37%), Gaps = 13/123 (10%)

Query: 391 NYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKW 450
           ++H H+SG +      +PC+           +K  ++ ++  +   LGSG FG V  G  
Sbjct: 6   HHHHHSSGLVPRGSHMAPCNDLHATKLAPGKEKEPLE-SQYQVGPLLGSGGFGSVYSGIR 64

Query: 451 RGS-IDVA--------MMKEGTMSEDDFIE-EAKVMTRLQHQ--NLVQLYGVCSKHRPIY 498
               + VA        +   G +     +  E  ++ ++      +++L     +     
Sbjct: 65  VSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV 124

Query: 499 IVT 501
           ++ 
Sbjct: 125 LIL 127

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 8/74 (10%)

Query: 434 LEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSEDDFIE-----EAKVMTRLQHQNLVQ 486
           + ++G G +GVV + + R  G I VA+ K     +D  I+     E +++ +L+H NLV 
Sbjct: 8   IGKIGEGSYGVVFKCRNRDTGQI-VAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVN 66

Query: 487 LYGVCSKHRPIYIV 500
           L  V  + R +++V
Sbjct: 67  LLEVFRRKRRLHLV 80

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 11/79 (13%)

Query: 434 LEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSEDDFIE--------EAKVMTRLQHQN 483
           L+ LG GQF  V + + +    I VA+ K       +  +        E K++  L H N
Sbjct: 15  LDFLGEGQFATVYKARDKNTNQI-VAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPN 73

Query: 484 LVQLYGVCSKHRPIYIVTD 502
           ++ L         I +V D
Sbjct: 74  IIGLLDAFGHKSNISLVFD 92

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 10/75 (13%)

Query: 435 EELGSGQFGVVRRGKWRGSIDVAMMKEGTMSED--DFIEEAKVMTRLQ-HQNLVQLYGVC 491
           + LG G  G V +   + + +   +K   M +D      E ++  R     ++V++  V 
Sbjct: 68  QVLGLGINGKVLQIFNKRTQEKFALK---MLQDCPKARREVELHWRASQCPHIVRIVDVY 124

Query: 492 ----SKHRPIYIVTD 502
               +  + + IV +
Sbjct: 125 ENLYAGRKCLLIVME 139

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 42.2 bits (100), Expect = 3e-04
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQLY 488
           LE++G G +GVV + K      VA+ +    +ED+      I E  ++  L H N+V L 
Sbjct: 26  LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI 85

Query: 489 GVCSKHRPIYIV 500
            V    R + +V
Sbjct: 86  DVIHSERCLTLV 97

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 42.0 bits (99), Expect = 3e-04
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 435 EELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKH 494
             +G G FG V R K + +     +K+  + E   +EE      L    +V LYG   + 
Sbjct: 64  PRVGRGSFGEVHRMKDKQTGFQCAVKKVRL-EVFRVEELVACAGLSSPRIVPLYGAVREG 122

Query: 495 RPIYIV 500
             + I 
Sbjct: 123 PWVNIF 128

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 5/74 (6%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAMM---KEGTMSEDDFIE-EAKVMTRLQHQNLVQL 487
           L++ LG G +G V+    R +   VA+     +  +   + I+ E  +   L H+N+V+ 
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70

Query: 488 YGVCSKHRPIYIVT 501
           YG   +    Y+  
Sbjct: 71  YGHRREGNIQYLFL 84

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 41.7 bits (99), Expect = 3e-04
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)

Query: 434 LEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQLY 488
           LE++G G +GVV + +       A+ K     ED+      I E  ++  L+H N+V+LY
Sbjct: 7   LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66

Query: 489 GVCSKHRPIYIV 500
            V    + + +V
Sbjct: 67  DVIHTKKRLVLV 78

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 8/63 (12%)

Query: 437 LGSGQFGVVRRGKWRGSIDVA-------MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
           +G G FGVV +G    +  VA       +       +  F +E KVM + QH+NLV+L G
Sbjct: 39  MGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97

Query: 490 VCS 492
             S
Sbjct: 98  FSS 100

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVA--MMKEGTMSEDDFIE---EAKVMTRLQHQNLVQ 486
           LL+ +G G F  V+  +   +  +VA  ++ +  ++     +   E ++M  L H N+V+
Sbjct: 19  LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 78

Query: 487 LYGVCSKHRPIYIVT 501
           L+ V    + +Y++ 
Sbjct: 79  LFEVIETEKTLYLIM 93

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 5/81 (6%)

Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDF---IEEAKVMTRL 479
           E+   +   + ELG+G  GVV +   + S  V   K     +        I E +V+   
Sbjct: 29  ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88

Query: 480 QHQNLVQLYGVCSKHRPIYIV 500
               +V  YG       I I 
Sbjct: 89  NSPYIVGFYGAFYSDGEISIC 109

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 42.0 bits (99), Expect = 3e-04
 Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
            ++++GSG FGV R  + + +   VA+  ++ G   +++   E      L+H N+V+   
Sbjct: 24  FVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKE 83

Query: 490 VCSKHRPIYIVT 501
           V      + I+ 
Sbjct: 84  VILTPTHLAIIM 95

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 5/74 (6%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAMM---KEGTMSEDDFIE-EAKVMTRLQHQNLVQL 487
           L++ LG G +G V+    R +   VA+     +  +   + I+ E  +   L H+N+V+ 
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70

Query: 488 YGVCSKHRPIYIVT 501
           YG   +    Y+  
Sbjct: 71  YGHRREGNIQYLFL 84

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 41.4 bits (98), Expect = 5e-04
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 8/74 (10%)

Query: 434 LEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQ 486
           +E++G G +GVV + + +  G + VA+ K    +E +      I E  ++  L H N+V+
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66

Query: 487 LYGVCSKHRPIYIV 500
           L  V      +Y+V
Sbjct: 67  LLDVIHTENKLYLV 80

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 13/108 (12%), Positives = 30/108 (27%), Gaps = 11/108 (10%)

Query: 401 ASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS------- 453
            +         P      +  D              LG G F          +       
Sbjct: 15  VAAPGAPAAAPPAKEIPEVLVDPRSRRRYVR--GRFLGKGGFAKCFEISDADTKEVFAGK 72

Query: 454 -IDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV 500
            +  +++ +     +    E  +   L HQ++V  +G    +  +++V
Sbjct: 73  IVPKSLLLKPHQ-REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 41.0 bits (97), Expect = 5e-04
 Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 8/74 (10%)

Query: 434 LEELGSGQFGVVRRGKWR--GSIDVAMMKEGTMSEDD-----FIEEAKVMTRLQHQNLVQ 486
           LE++G G +G V + K R    I VA+ +     +D+      + E  ++  L+H+N+V+
Sbjct: 7   LEKIGEGTYGTVFKAKNRETHEI-VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65

Query: 487 LYGVCSKHRPIYIV 500
           L+ V    + + +V
Sbjct: 66  LHDVLHSDKKLTLV 79

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 41.1 bits (97), Expect = 6e-04
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 11/78 (14%)

Query: 433 LLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDDFIE-EAKVMTRLQHQN 483
           + E LG G FG V+      +        I   ++K+  M     +E E   +  L+H +
Sbjct: 13  IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR--VEREISYLKLLRHPH 70

Query: 484 LVQLYGVCSKHRPIYIVT 501
           +++LY V +    I +V 
Sbjct: 71  IIKLYDVITTPTDIVMVI 88

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 8/97 (8%)

Query: 414 PATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE----GTMSEDDF 469
                       ID    + +++LG G F  V   +         +K          ++ 
Sbjct: 14  RENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEA 73

Query: 470 IEEAKVMTRLQHQNLVQLYGVCSKHRP----IYIVTD 502
             EA +     H N+++L   C + R      +++  
Sbjct: 74  QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110

>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A Length = 96

 Score = 38.1 bits (88), Expect = 6e-04
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)

Query: 102 DTQEHWWKVKDKNGIRKPDQMIRPKVVV----ALYPFKAIEGGDLSLEKGAEYEVMDDTQ 157
           + +E   K K +  I+K  ++  P  V+    A    K     +LS ++G + E++  T 
Sbjct: 1   EKKEQKEKEKKEQEIKKKFKLTGPIQVIHLAKACCDVKG-GKNELSFKQGEQIEIIRITD 59

Query: 158 --EHWWKVKDKNGSVGYIPSNYV 178
             E  W  +   GS GYI +  V
Sbjct: 60  NPEGKWLGRTARGSYGYIKTTAV 82

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 40.8 bits (96), Expect = 7e-04
 Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 5/68 (7%)

Query: 427 DPAEL-MLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSED---DFIEEAKVMTRL-QH 481
           DPA +  L+E +G+G +G V +G+   +  +A +K   ++ D   +  +E  ++ +   H
Sbjct: 21  DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHH 80

Query: 482 QNLVQLYG 489
           +N+   YG
Sbjct: 81  RNIATYYG 88

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 40.7 bits (95), Expect = 7e-04
 Identities = 10/87 (11%), Positives = 22/87 (25%), Gaps = 9/87 (10%)

Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGSID------VAM--MKEGTMSEDD-FIEEAKV 475
           ++    + +   LG G F  V         D        +   K     E     +  + 
Sbjct: 61  QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMER 120

Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +        ++ Y          +V +
Sbjct: 121 LKPSMQHMFMKFYSAHLFQNGSVLVGE 147

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 40.7 bits (96), Expect = 8e-04
 Identities = 19/95 (20%), Positives = 46/95 (48%), Gaps = 9/95 (9%)

Query: 415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDDFIE 471
           A A +   K+ ID  ++     LG G+FG V   + + +   +A+  + +  + ++    
Sbjct: 2   ALAEMPKRKFTIDDFDI--GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH 59

Query: 472 ----EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
               E ++ + L+H N++++Y      + IY++ +
Sbjct: 60  QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLE 94

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 40.8 bits (95), Expect = 8e-04
 Identities = 15/84 (17%), Positives = 24/84 (28%), Gaps = 7/84 (8%)

Query: 428 PAELMLLEELGSGQFGVVRRGKWRGS-IDVAM------MKEGTMSEDDFIEEAKVMTRLQ 480
             +L L+E L  G   VV   +      D A+       +      +   E      RL 
Sbjct: 61  ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLL 120

Query: 481 HQNLVQLYGVCSKHRPIYIVTDTS 504
            ++  +         P   V   S
Sbjct: 121 GESPEEARDRRRLLLPSDAVAVQS 144

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 40.3 bits (95), Expect = 8e-04
 Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 11/86 (12%)

Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDDFIEEAK 474
           +W ++  E+     LG G+FG V   + + S        +  A +++  + E     E +
Sbjct: 5   QWALEDFEI--GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVE 61

Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIV 500
           + + L+H N+++LYG       +Y++
Sbjct: 62  IQSHLRHPNILRLYGYFHDATRVYLI 87

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 40.9 bits (96), Expect = 9e-04
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 7/76 (9%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAMM---KEGTMSEDDF--IE-EAKVMTRLQHQNLV 485
           L + LG G FG V+ GK   +   VA+    ++   S D    I  E + +   +H +++
Sbjct: 20  LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHII 79

Query: 486 QLYGVCSKHRPIYIVT 501
           +LY V S    I++V 
Sbjct: 80  KLYQVISTPSDIFMVM 95

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	513
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.98
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.97
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.97
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.97
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.97
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.95
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.95
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.95
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.95
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.95
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.94
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.94
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.94
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.94
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.94
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.93
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.93
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.93
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.92
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.92
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.89
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.89
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.89
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.89
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.87
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.87
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.84
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.84
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.84
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.84
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.84
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.84
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.84
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.84
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.84
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.84
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.84
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.83
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.83
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.83
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.83
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.83
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.83
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.83
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.83
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.83
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.83
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.82
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.82
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.82
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.82
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.82
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.82
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.82
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.82
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.82
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.82
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.82
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.82
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.82
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.81
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.81
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.81
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.81
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.81
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.81
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.81
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.81
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.81
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.81
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.81
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.81
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.81
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.81
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.81
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.81
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.81
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.81
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.81
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.81
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.81
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.8
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.8
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.8
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.8
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.8
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.8
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.8
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.8
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.8
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.8
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.8
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.8
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.8
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.8
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.8
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.8
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.8
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.8
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.8
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.79
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.79
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.79
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.79
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.79
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.79
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.79
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.79
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.79
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.79
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.79
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.79
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.79
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.79
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.79
3niz_A	311	Rhodanese family protein; structural genomics, str	99.79
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.79
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.79
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.79
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.79
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.79
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.79
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.79
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.79
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.79
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.79
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.78
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.78
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.78
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.78
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.78
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.78
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.78
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.78
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.78
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.78
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.78
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.78
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.78
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.78
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.78
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.78
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.78
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.78
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.78
3bhy_A	283	Death-associated protein kinase 3; death associate	99.78
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.78
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.78
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.78
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.78
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.78
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.78
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.77
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.77
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.77
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.77
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.77
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.77
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.77
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.77
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.77
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.77
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.77
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.77
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.77
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.77
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.77
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.77
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.77
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.77
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.77
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.77
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.76
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.76
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.76
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.76
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.76
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.76
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.76
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.76
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.76
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.76
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.76
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.76
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.76
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.76
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.76
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.76
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.76
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.76
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.76
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.76
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.76
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.76
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.76
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.76
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.76
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.76
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.76
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.76
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.76
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.76
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.76
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.75
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.75
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.75
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.75
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.75
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.75
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.75
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.75
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.75
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.75
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.75
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.75
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.75
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.74
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.74
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.74
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.74
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.74
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.74
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.74
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.74
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.74
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.74
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.74
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.74
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.73
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.73
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.73
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.73
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.73
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.73
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.73
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.73
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.73
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.72
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.72
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.72
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.72
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.72
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.72
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.72
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.72
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.71
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.71
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.7
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.7
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.7
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.7
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.69
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.69
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.69
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.68
3uqc_A	286	Probable conserved transmembrane protein; structur	99.65
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.63
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.61
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.6
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.6
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.6
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.59
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.59
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.57
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.57
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.54
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.52
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.52
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.52
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.51
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.5
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	99.46
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.46
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.45
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.44
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.43
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.43
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.41
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.38
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.38
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.37
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	99.34
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.31
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.3
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.29
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	99.27
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.25
2dly_A	121	FYN-related kinase; BRK family kinase, structural	99.25
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.24
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	99.24
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.23
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	99.23
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	99.23
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	99.21
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	99.21
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	99.19
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.19
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.19
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	99.19
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.18
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.18
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	99.17
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	99.17
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	99.16
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.16
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.15
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	99.15
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	99.14
3uqc_A	286	Probable conserved transmembrane protein; structur	99.14
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.14
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	99.14
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	99.14
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.14
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.14
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	99.14
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.13
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.13
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.13
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.13
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.13
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	99.12
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.12
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.12
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	99.12
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.11
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.11
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.11
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.11
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	99.11
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	99.11
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.11
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.1
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.1
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	99.1
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	99.1
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.1
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.1
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.09
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.09
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.09
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	99.08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.08
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.08
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.08
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.08
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.08
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.08
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.08
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.08
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.08
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	99.07
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.07
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.07
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	99.07
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.07
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	99.06
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.06
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	99.06
3niz_A	311	Rhodanese family protein; structural genomics, str	99.06
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.06
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.06
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.05
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.05
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.05
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.05
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.05
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	99.04
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.04
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.04
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.04
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.04
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.04
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.04
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.04
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.04
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.04
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.03
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.03
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.03
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.03
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.03
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.03
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.03
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.03
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.03
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.03
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	99.02
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.02
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	99.02
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.02
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.02
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.02
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.02
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.02
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.02
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.01
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.01
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	99.01
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.01
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.01
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	99.01
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.01
2lnw_A	122	VAV-2, guanine nucleotide exchange factor VAV2; si	99.01
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.01
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.0
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	99.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.99
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	98.99
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	98.99
3bhy_A	283	Death-associated protein kinase 3; death associate	98.99
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	98.99
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	98.99
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	98.98
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	98.98
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.98
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	98.98
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.98
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	98.98
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.98
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	98.98
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.98
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	98.98
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.98
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.97
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.97
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	98.97
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	98.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	98.97
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	98.97
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.97
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	98.97
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	98.97
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	98.97
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	98.97
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.97
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	98.96
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	98.96
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	98.96
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	98.96
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	98.96
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	98.96
2a19_B	284	Interferon-induced, double-stranded RNA-activated	98.96
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	98.95
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.95
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.95
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.94
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	98.94
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.94
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.94
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	98.94
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.94
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	98.94
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	98.94
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.94
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.94
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.93
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	98.93
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	98.93
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.93
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	98.93
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.93
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	98.93
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	98.93
3ork_A	311	Serine/threonine protein kinase; structural genomi	98.93
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	98.92
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.92
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.92
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.92
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.92
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.92
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.91
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.91
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.91
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.91
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	98.91
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.9
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.9
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	98.9
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	98.9
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.9
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.9
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.9
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	98.9
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.89
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	98.89
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.89
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	98.89
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	98.89
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.88
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	98.88
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.87
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.87
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	98.86

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.98  E-value=4.7e-31  Score=277.44  Aligned_cols=256  Identities=39%  Similarity=0.724  Sum_probs=209.3

Q ss_pred             cEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecC-CCccccccCCceeeccccccccccCCCCchhhhhhhhc
Q psy17476        126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK-NGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVL  204 (513)
Q Consensus       126 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  204 (513)
                      ..++++|||.+...++|+|++||.+.|++..++.||.++.. .|..|++|.+|+++.+.+                    
T Consensus         3 ~~~~al~~~~~~~~~el~~~~gd~~~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~~l--------------------   62 (452)
T 1fmk_A            3 TTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSI--------------------   62 (452)
T ss_dssp             EEEEESSCBCCCSSSBCCBCTTCEEEESCCCSSSEEEEEETTTCCEEEEEGGGEEETTSG--------------------
T ss_pred             eEEEECCccCCCCCCCCCccCCCEEEEeccCCCCceEEEEcCCCcccccCcccccccccc--------------------
Confidence            46899999999999999999999999999989999999886 689999999998753311                    


Q ss_pred             ccccccccCccccceeeeeeeeecCCCCCCCCCcceeccccccccccCCCCCcCCCCCCHHHHHHHHcCC-CCCceEEEe
Q psy17476        205 NYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQE-DKEGCFVVR  283 (513)
Q Consensus       205 ~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p~~w~~~~~~R~~aeeLL~~~-~~~g~fliR  283 (513)
                                                                      ...+|+++.++|..|+++|... ..+|.||||
T Consensus        63 ------------------------------------------------e~~~w~~g~~~r~~ae~~L~~~~~~~G~FLvR   94 (452)
T 1fmk_A           63 ------------------------------------------------QAEEWYFGKITRRESERLLLNAENPRGTFLVR   94 (452)
T ss_dssp             ------------------------------------------------GGSTTEEETCCHHHHHHHHTCTTSCTTEEEEE
T ss_pred             ------------------------------------------------cccccccCCccHHHHHHHhccCCCCCceEEEE
Confidence                                                            0124999999999999999764 467999999


Q ss_pred             ecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhccCCcEEEEecCCCCcEEEEEEeeeCCCcc
Q psy17476        284 NSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHV  362 (513)
Q Consensus       284 ~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v  362 (513)
                      +|++ ++.|++|++.....                                                        ....+
T Consensus        95 ~s~~~~g~y~lsv~~~~~~--------------------------------------------------------~~~~v  118 (452)
T 1fmk_A           95 ESETTKGAYCLSVSDFDNA--------------------------------------------------------KGLNV  118 (452)
T ss_dssp             ECSSSTTCEEEEEEEEETT--------------------------------------------------------TEEEE
T ss_pred             eCCCCCCceEEEEEeeccC--------------------------------------------------------CCCcE
Confidence            9965 78899987642100                                                        02357


Q ss_pred             ceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCCCCCCCcccCCCCccccCCcCceeEeEeccccc
Q psy17476        363 KHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQF  442 (513)
Q Consensus       363 ~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~f  442 (513)
                      +|+.|....++.|++.+...|.++.+++.+|....++++.++. .+|+...+....+..+.|+++.++|++.+.||+|+|
T Consensus       119 ~h~~I~~~~~g~~~~~~~~~F~Sl~~Li~~y~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~f  197 (452)
T 1fmk_A          119 KHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLT-TVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCF  197 (452)
T ss_dssp             EEEEEEECTTSCEESSTTSEESSHHHHHHHHTTCCTTSSSCCC-EECCCCCCCCSSSSTTCSBCCGGGEEEEEEEEECSS
T ss_pred             EEEEEEEcCCCCEEEecCcccCCHHHHHHHhhhccccchhhcc-ccccccccccCCCCccccccChhHceeeeeecCCCC
Confidence            7888887777788888888899999999999998888776654 345544555556667899999999999999999999


Q ss_pred             ceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccCCCC
Q psy17476        443 GVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       443 G~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~~~G  507 (513)
                      |.||+|.+.++..++++..  .....++|.+|+++|++++|||||++++++.+ +.+|||||||++|
T Consensus       198 g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~g  263 (452)
T 1fmk_A          198 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKG  263 (452)
T ss_dssp             CEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTC
T ss_pred             eEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCC
Confidence            9999999987666554443  23346789999999999999999999999976 6789999999985

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.97  E-value=1.8e-30  Score=278.65  Aligned_cols=257  Identities=39%  Similarity=0.720  Sum_probs=207.6

Q ss_pred             CcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecC-CCccccccCCceeeccccccccccCCCCchhhhhhhh
Q psy17476        125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK-NGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQV  203 (513)
Q Consensus       125 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (513)
                      ...++++|||.+...++|+|++||++.|++..++.||.++.. .|..|++|.+|++..+.+                   
T Consensus        85 ~~~~~alyd~~~~~~~el~~~~gd~i~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~~l-------------------  145 (535)
T 2h8h_A           85 VTTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSI-------------------  145 (535)
T ss_dssp             --CEEESSCBCCCSSSBCCBCTTCEEEEEECSSSSEEEEEETTTCCEEEEEGGGEEETTSG-------------------
T ss_pred             CcEEEEccccCCcCCCcCCcCCCCEEEEEEecCCCceEEEECCCCcceEecchhhcccccc-------------------
Confidence            346999999999999999999999999999999999999886 689999999998753210                   


Q ss_pred             cccccccccCccccceeeeeeeeecCCCCCCCCCcceeccccccccccCCCCCcCCCCCCHHHHHHHHcCC-CCCceEEE
Q psy17476        204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQE-DKEGCFVV  282 (513)
Q Consensus       204 i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p~~w~~~~~~R~~aeeLL~~~-~~~g~fli  282 (513)
                                                                       ....|+++.++|..|+++|... +.+|.|||
T Consensus       146 -------------------------------------------------~~~~wy~g~i~r~~ae~~L~~~~~~~G~FLv  176 (535)
T 2h8h_A          146 -------------------------------------------------QAEEWYFGKITRRESERLLLNAENPRGTFLV  176 (535)
T ss_dssp             -------------------------------------------------GGSTTBCCSCCHHHHHHHHTCTTCCTTEEEE
T ss_pred             -------------------------------------------------cccceeccccCHHHHHHHhccCCCCCCeEEE
Confidence                                                             0124999999999999999764 46799999


Q ss_pred             eecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhccCCcEEEEecCCCCcEEEEEEeeeCCCc
Q psy17476        283 RNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPH  361 (513)
Q Consensus       283 R~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~~g~~LvR~s~~~~~~~lsv~~~~~~~~  361 (513)
                      |++++ .+.|+++++.....                                                        ....
T Consensus       177 R~S~~~~g~y~lsv~~~~~~--------------------------------------------------------~~~~  200 (535)
T 2h8h_A          177 RESETTKGAYCLSVSDFDNA--------------------------------------------------------KGLN  200 (535)
T ss_dssp             EECSSSTTCEEEEEEEEETT--------------------------------------------------------TEEE
T ss_pred             EecCCCCCcEEEEEEeeccC--------------------------------------------------------CCCc
Confidence            99965 78898887642100                                                        0235


Q ss_pred             cceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCCCCCCCcccCCCCccccCCcCceeEeEecccc
Q psy17476        362 VKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQ  441 (513)
Q Consensus       362 v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~  441 (513)
                      ++||+|....++.|++.....|.++.+|+.+|....++++..+.. +|+...+....+..+.|++..++|++.+.||+|+
T Consensus       201 v~h~~I~~~~~g~~~i~~~~~F~SL~eLv~~y~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~  279 (535)
T 2h8h_A          201 VKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTT-VCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGC  279 (535)
T ss_dssp             EEEEEEBC-CCSCEEEETTEEESSHHHHHHHHHHCCTTSSSCCCE-ECCCCCCCCSSSSTTCSBCCGGGEEEEEEEEECS
T ss_pred             eEEEEEEEcCCCcEEeeccccccChHHhheeeccccCcccccccc-ccccccccccccCccceecchhhhhhheecccCC
Confidence            678888776777888888888999999999999988887766643 3444445555566789999999999999999999


Q ss_pred             cceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccCCCC
Q psy17476        442 FGVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       442 fG~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~~~G  507 (513)
                      ||.||+|.+.+...|+++..  .....++|.+|+++|++++|||||++++++.+ +.+|||||||++|
T Consensus       280 fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~g  346 (535)
T 2h8h_A          280 FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKG  346 (535)
T ss_dssp             SEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTE
T ss_pred             CeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCC
Confidence            99999999987666554442  33456789999999999999999999999976 6789999999985

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.97  E-value=2.1e-30  Score=275.50  Aligned_cols=253  Identities=33%  Similarity=0.628  Sum_probs=200.1

Q ss_pred             CCcEEEEeccCCCCCCCCCCCCCCCEEEEeecC-CccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhh
Q psy17476        124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT-QEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQ  202 (513)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (513)
                      .+..++++|||.+...++|+|++||.+.|++.. +..||.++.. |..|++|.+|+++...+                  
T Consensus        42 ~~~~~~alyd~~~~~~~els~~~gd~~~v~~~~~~~~w~~~~~~-~~~G~~P~~yv~~~~~l------------------  102 (495)
T 1opk_A           42 DPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTK-NGQGWVPSNYITPVNSL------------------  102 (495)
T ss_dssp             --CEEEESSCBCCCSTTBCCBCTTCEEEEEEECTTSSEEEEECS-SCEEEEEGGGEEESSSG------------------
T ss_pred             CCcEEEEeCCcCCCCCCCCCccCCCEEEEeecCCCCCceeeeec-CCcceeccccccccccc------------------
Confidence            456799999999999999999999999999876 6688887755 66799999998753210                  


Q ss_pred             hcccccccccCccccceeeeeeeeecCCCCCCCCCcceeccccccccccCCCCCcCCCCCCHHHHHHHHcCCCCCceEEE
Q psy17476        203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFVV  282 (513)
Q Consensus       203 ~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p~~w~~~~~~R~~aeeLL~~~~~~g~fli  282 (513)
                                                                        ....|+|+.++|..|+++|.. ..+|.|||
T Consensus       103 --------------------------------------------------e~~~wyhg~i~r~~ae~ll~~-~~~G~fLv  131 (495)
T 1opk_A          103 --------------------------------------------------EKHSWYHGPVSRNAAEYLLSS-GINGSFLV  131 (495)
T ss_dssp             --------------------------------------------------GGSTTEEEECCHHHHHHHGGG-CCTTEEEE
T ss_pred             --------------------------------------------------cchhhhccCCCHHHHHHHhhC-CCCceEEE
Confidence                                                              113499999999999999975 67899999


Q ss_pred             eecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhccCCcEEEEecCCCCcEEEEEEeeeCCCc
Q psy17476        283 RNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPH  361 (513)
Q Consensus       283 R~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~~g~~LvR~s~~~~~~~lsv~~~~~~~~  361 (513)
                      |++++ .+.|++|++.                                                             .+.
T Consensus       132 R~s~~~~~~~~lsv~~-------------------------------------------------------------~~~  150 (495)
T 1opk_A          132 RESESSPGQRSISLRY-------------------------------------------------------------EGR  150 (495)
T ss_dssp             EECSSSTTCEEEEEEE-------------------------------------------------------------TTE
T ss_pred             EeCCCCCCceEEEEee-------------------------------------------------------------CCe
Confidence            99974 7888888764                                                             245


Q ss_pred             cceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCCCCCCCc--ccCCCCccccCCcCceeEeEecc
Q psy17476        362 VKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPAT--AGLSHDKWEIDPAELMLLEELGS  439 (513)
Q Consensus       362 v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~lG~  439 (513)
                      ++|++|....++.+++.....|.++.+++.+|....+++...+..+......+..  .....+.|++..++|++.+.||+
T Consensus       151 v~h~~I~~~~~g~~~~~~~~~F~sl~eLv~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~  230 (495)
T 1opk_A          151 VYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGG  230 (495)
T ss_dssp             EEEEECEECTTSCEESSTTSCBSSHHHHHHHHTTCCTTSSSCCCEECCCCSCCCCSSSCSSSSCCBCCGGGEEEEEESGG
T ss_pred             EEEEEEEecCCCceEeccCccchhHHHHhhhhcccccccchhccccccccccccccccCccccccccCHHHceeeeEecC
Confidence            6677776666677777777889999999999988887777655432222212211  12235789999999999999999


Q ss_pred             cccceEEEEEEeCceeeEEeecC---CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccCCCC
Q psy17476        440 GQFGVVRRGKWRGSIDVAMMKEG---TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       440 G~fG~V~~g~~~~~~~v~~~k~~---~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~~~G  507 (513)
                      |+||.||+|.++.....+++|..   ....++|.+|+.+|++++|||||+++++|...+.+|||||||++|
T Consensus       231 G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g  301 (495)
T 1opk_A          231 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG  301 (495)
T ss_dssp             GTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             CCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCC
Confidence            99999999999875555555532   334678999999999999999999999999999999999999975

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.97  E-value=2.6e-29  Score=264.30  Aligned_cols=255  Identities=36%  Similarity=0.659  Sum_probs=203.3

Q ss_pred             CcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeec-CCCccccccCCceeeccccccccccCCCCchhhhhhhh
Q psy17476        125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQV  203 (513)
Q Consensus       125 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (513)
                      ...++++|||.+...++|+|++||.+.|++.+ ++||.+++ ..|..|++|.+|+.+.+.+                   
T Consensus         8 ~~~~~al~~~~~~~~~el~~~~gd~~~v~~~~-~~W~~~~~~~~g~~G~~P~~yv~~~~~l-------------------   67 (454)
T 1qcf_A            8 RIIVVALYDYEAIHHEDLSFQKGDQMVVLEES-GEWWKARSLATRKEGYIPSNYVARVDSL-------------------   67 (454)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEEECC-TTEEEEEETTTCCEEEEEGGGEEETTCG-------------------
T ss_pred             CeEEEECcccCCcCCCcCcccCCCEEEEEecC-CCCeEEEECCCCceEEecchhccccccc-------------------
Confidence            45799999999999999999999999999885 78999987 5789999999998653210                   


Q ss_pred             cccccccccCccccceeeeeeeeecCCCCCCCCCcceeccccccccccCCCCCcCCCCCCHHHHHHHHcC-CCCCceEEE
Q psy17476        204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQ-EDKEGCFVV  282 (513)
Q Consensus       204 i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p~~w~~~~~~R~~aeeLL~~-~~~~g~fli  282 (513)
                                                                       ....|+++.++|..|+++|.. ...+|.|||
T Consensus        68 -------------------------------------------------e~~~W~~g~i~r~~ae~~L~~~~~~~G~FLv   98 (454)
T 1qcf_A           68 -------------------------------------------------ETEEWFFKGISRKDAERQLLAPGNMLGSFMI   98 (454)
T ss_dssp             -------------------------------------------------GGSTTEETTCCHHHHHHHHHSTTCCTTCEEE
T ss_pred             -------------------------------------------------ccccccccccchhhhhhhhhcCCCCCceEEE
Confidence                                                             012499999999999998754 457999999


Q ss_pred             eecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhccCCcEEEEecCCCCcEEEEEEeeeCCCc
Q psy17476        283 RNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPH  361 (513)
Q Consensus       283 R~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~~g~~LvR~s~~~~~~~lsv~~~~~~~~  361 (513)
                      |+|++ .+.|++|++...+.                                                        ....
T Consensus        99 R~s~~~~g~y~lsv~~~~~~--------------------------------------------------------~~~~  122 (454)
T 1qcf_A           99 RDSETTKGSYSLSVRDYDPR--------------------------------------------------------QGDT  122 (454)
T ss_dssp             EECSSSTTSEEEEEEEEETT--------------------------------------------------------TEEE
T ss_pred             EECcCCCCeEEEEEEecccC--------------------------------------------------------CCCc
Confidence            99965 78899987652111                                                        0235


Q ss_pred             cceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCCCCCCCcccCCCCccccCCcCceeEeEecccc
Q psy17476        362 VKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQ  441 (513)
Q Consensus       362 v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~  441 (513)
                      ++|+.|....++.|++.+...|.++.+++.+|....++++..+.. ++....+. .....+.|+++.++|.+.+.||+|+
T Consensus       123 v~H~~I~~~~~g~~~i~~~~~F~sl~eLv~~y~~~~~~l~~~~~~-~~~~~~~~-~~~~~~~~~i~~~~~~~~~~lG~G~  200 (454)
T 1qcf_A          123 VKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSV-PCMSSKPQ-KPWEKDAWEIPRESLKLEKKLGAGQ  200 (454)
T ss_dssp             EEEEEEEECTTSCEESSSSSCBSSHHHHHHHHTSSCTTSSSCCCS-BCCCCCCC-CCCCTTCSBCCGGGEEEEEEEECCS
T ss_pred             eEEEEEEEcCCCcEEEeCccccCCHHHHHHHHHhccCCccccccc-cccccCcc-ccccccceeechHHeEEEEEcccCC
Confidence            678888777777888888889999999999999988777665532 33332222 2244678999999999999999999


Q ss_pred             cceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccCCCC
Q psy17476        442 FGVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       442 fG~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~~~G  507 (513)
                      ||.||+|.+.....+++++.  .....+.|.+|+++|++++|||||++++++. .+.+|||||||++|
T Consensus       201 fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g  267 (454)
T 1qcf_A          201 FGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKG  267 (454)
T ss_dssp             SEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTC
T ss_pred             ceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCC
Confidence            99999999977655554442  2345678999999999999999999999987 56799999999986

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.97  E-value=3.5e-29  Score=263.03  Aligned_cols=257  Identities=30%  Similarity=0.520  Sum_probs=198.6

Q ss_pred             CCcEEEEeccCCCCCCCCCCCCCCCEEEEeec-CCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhh
Q psy17476        124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDD-TQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQ  202 (513)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (513)
                      ....++++|||.+...++|+|++||++.|++. .++.||.++...|..|++|.+|+++.+.+                  
T Consensus        10 ~~~~~~aly~~~~~~~~el~~~~gd~i~v~~~~~~~~ww~~~~~~g~~G~~P~~yv~~~~~~------------------   71 (450)
T 1k9a_A           10 SGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGV------------------   71 (450)
T ss_dssp             TTCEEEESSCBCCSSSSBCCBCTTCEEEEEEECSSTTEEEEECTTCCEEEEEGGGEEECCCC------------------
T ss_pred             CCCEEEECCCcCccCCCcCCCCCCCEEEEeeccCCCCceEEEECCCceeeechhcccccccc------------------
Confidence            45679999999999999999999999999997 57799999877899999999999864321                  


Q ss_pred             hcccccccccCccccceeeeeeeeecCCCCCCCCCcceeccccccccccCCCCCcCCCCCCHHHHHHHHcCCCCCceEEE
Q psy17476        203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFVV  282 (513)
Q Consensus       203 ~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p~~w~~~~~~R~~aeeLL~~~~~~g~fli  282 (513)
                             ....+                                     -...+|+++.++|..|+++|.. ..+|.|+|
T Consensus        72 -------~~~~~-------------------------------------~~~~~wyhg~i~r~~ae~~L~~-~~~G~Flv  106 (450)
T 1k9a_A           72 -------KAGTK-------------------------------------LSLMPWFHGKITREQAERLLYP-PETGLFLV  106 (450)
T ss_dssp             -------CCCTT-------------------------------------EESCTTBCTTCCHHHHHHHTCS-CCTTEEEE
T ss_pred             -------ccccc-------------------------------------cccccccccCcCHHHhhhhhcc-CCCceEEE
Confidence                   00000                                     0113599999999999999975 46799999


Q ss_pred             eecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhccCCcEEEEecCCCCcEEEEEEeeeCCCc
Q psy17476        283 RNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPH  361 (513)
Q Consensus       283 R~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~~g~~LvR~s~~~~~~~lsv~~~~~~~~  361 (513)
                      |++++ .+.|++|+..                                                             .+.
T Consensus       107 R~S~~~~g~~~Lsv~~-------------------------------------------------------------~~~  125 (450)
T 1k9a_A          107 RESTNYPGDYTLCVSC-------------------------------------------------------------EGK  125 (450)
T ss_dssp             EECSSSTTSEEEEEEC-------------------------------------------------------------SSS
T ss_pred             EecCCCCCceEEEEEe-------------------------------------------------------------CCe
Confidence            99965 7888888754                                                             245


Q ss_pred             cceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCCCCCCC--cccCCCCccccCCcCceeEeEecc
Q psy17476        362 VKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVPA--TAGLSHDKWEIDPAELMLLEELGS  439 (513)
Q Consensus       362 v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~lG~  439 (513)
                      ++|+.|.. .++.+++.+...|.++.+++.+|....++++.++..+ +....+.  ...+....|++..++|++.+.||+
T Consensus       126 v~H~~I~~-~~~~~~i~~~~~F~sl~eLv~~y~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~  203 (450)
T 1k9a_A          126 VEHYRIMY-HASKLSIDEEVYFENLMQLVEHYTTDADGLCTRLIKP-KVMEGTVAAQDEFYRSGWALNMKELKLLQTIGK  203 (450)
T ss_dssp             EEEEEEEE-ETTEEESSSSSCBSSHHHHHHHHHHCCTTSSSCCCEE-CCCTTCEEHHHHHHHTTCBCCGGGEEEEEEEEE
T ss_pred             eeEEEEEe-cCCceEeccccccccHHHHHhhhcccccchhhhcccc-ccccCcccchhhhcccccccChHHeEEEeeecC
Confidence            66777743 4556787888899999999999998887776655432 2211111  112235689999999999999999


Q ss_pred             cccceEEEEEEeCceeeEEeec-CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCC-eeEEEEccCCCC
Q psy17476        440 GQFGVVRRGKWRGSIDVAMMKE-GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHR-PIYIVTDTSSFR  507 (513)
Q Consensus       440 G~fG~V~~g~~~~~~~v~~~k~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~-~~~lV~E~~~~G  507 (513)
                      |+||.||+|.+.+. .++++.. .....+.|.+|+++|++++|||||++++++...+ .+|||||||++|
T Consensus       204 G~fg~V~~~~~~~~-~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g  272 (450)
T 1k9a_A          204 GEFGDVMLGDYRGN-KVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG  272 (450)
T ss_dssp             CSSEEEEEEEETTE-EEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTC
T ss_pred             cCCeeEEEEEecCC-eEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCC
Confidence            99999999998743 4443332 2224578999999999999999999999988765 799999999985

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.95  E-value=1.6e-26  Score=251.63  Aligned_cols=245  Identities=27%  Similarity=0.461  Sum_probs=187.5

Q ss_pred             CCcCCCCCCHHHHHHHHcCC-CCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccCh----
Q psy17476        255 KAWYVGDMSRQRAESILKQE-DKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSI----  328 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~-~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~----  328 (513)
                      .+|+++.++|..|+++|... .++|+||||+|++ ++.|+||++.   ...++||+|....+|.|++.....+.++    
T Consensus         8 ~~W~~g~i~r~~ae~~L~~~~~~~G~fLvR~s~~~~g~~~ls~~~---~~~~~h~~i~~~~~g~~~~~~~~~f~sl~~Lv   84 (613)
T 2ozo_A            8 LPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVH---DVRFHHFPIERQLNGTYAIAGGKAHCGPAELC   84 (613)
T ss_dssp             CTTBCBSCCHHHHHHHHHTTTCCTTEEEEEECTTBTTCEEEEEEE---TTEEEEEEEEECTTSCEEETTSCCBSSHHHHH
T ss_pred             CCCcCccCCHHHHHHHHhccCCCCCeEEEEecCCCCCCEEEEEEE---CCeEEEEEEEECCCCcEEECCCCCcCCHHHHH
Confidence            45999999999999998653 4689999999976 7999999987   6789999999888888877543333221    


Q ss_pred             --------------------------------------------------------------------------------
Q psy17476        329 --------------------------------------------------------------------------------  328 (513)
Q Consensus       329 --------------------------------------------------------------------------------  328 (513)
                                                                                                      
T Consensus        85 ~~y~~~~~~l~~~L~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~we~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~wy  164 (613)
T 2ozo_A           85 EFYSRDPDGLPCNLRKPCNRPSGLEPQPGVFDCLRDAMVRDYVRQTWKLEGEALEQAIISQAPQVEKLIATTAHERMPWY  164 (613)
T ss_dssp             HHHTSCCTTSSSCCCSBCCCCTTCCCBCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTSCTTTSTTB
T ss_pred             HHHhhCCCCCCccCCccCCCCCCCCCCccchhHHHHHHHHHHHHHHhhcCchHHHHHhhcCCCchhhcccccccccCCcc
Confidence                                                                                            


Q ss_pred             ---------hhhhc----cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccc
Q psy17476        329 ---------PEVKD----KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRH  395 (513)
Q Consensus       329 ---------~~~l~----~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~  395 (513)
                               +.+|.    ..|+||||.|+..|.|+|++..   .+.++|++|.+..+|.|++.+...|.++.+||+||..
T Consensus       165 hg~i~r~~ae~~L~~~~~~~G~FLvR~s~~~~~~~lsv~~---~~~v~h~~I~~~~~g~~~~~~~~~F~sl~~Lv~~y~~  241 (613)
T 2ozo_A          165 HSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIY---GKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKL  241 (613)
T ss_dssp             CTTCCHHHHHHHHSSSCCCTTCEEEEECSSTTEEEEEEEE---TTEEEEEEEEECTTCCEECTTSCEESSHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHHhhcCCCCceEEEEecCCCCCEEEEEEE---CCeEEEEEEEECCCCCEEECCCCCcCCHHHHHHHHhh
Confidence                     11232    4799999999666899999987   4789999999888889998888899999999999999


Q ss_pred             cCCCCccccCcCCCCCCC------------C--------------------------------------C----------
Q psy17476        396 NSGGLASRLKTSPCDRPV------------P--------------------------------------A----------  415 (513)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~------------~--------------------------------------~----------  415 (513)
                      .+++++..+..+ |+...            +                                      .          
T Consensus       242 ~~~~l~~~L~~p-C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (613)
T 2ozo_A          242 KADGLIYCLKEA-CPNSSASNASGAAAPTLPAHPSTLTHPQRRIDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESPFS  320 (613)
T ss_dssp             CCTTCSSCCCSB-CCC-----------------------------------------------------CCCCSCSSSSS
T ss_pred             CCCCceeccccc-cccccccccccccCcccCCCCccccccccccccccccCCCCCccccCCCCCCCCCCCccccccCCcC
Confidence            888876655322 21100            0                                      0          


Q ss_pred             -cccCCCCccccCCcCceeEe-EecccccceEEEEEEeC--ceeeEEeecCC-----CCHHHHHHHHHHHhcCCCCceec
Q psy17476        416 -TAGLSHDKWEIDPAELMLLE-ELGSGQFGVVRRGKWRG--SIDVAMMKEGT-----MSEDDFIEEAKVMTRLQHQNLVQ  486 (513)
Q Consensus       416 -~~~~~~~~~~~~~~~~~~~~-~lG~G~fG~V~~g~~~~--~~~v~~~k~~~-----~~~~~f~~E~~il~~l~HpNIV~  486 (513)
                       ...+....|.+..+++.+.+ .||+|+||.||+|.++.  ....+++|...     ...++|.+|+++|++++|||||+
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~  400 (613)
T 2ozo_A          321 DPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR  400 (613)
T ss_dssp             CSCSSCCCCSBCCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCC
T ss_pred             ChhHhcccceeccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEee
Confidence             00011124566667777776 89999999999998863  33334444322     23568999999999999999999


Q ss_pred             eeeEEEeCCeeEEEEccCCCC
Q psy17476        487 LYGVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       487 l~g~~~~~~~~~lV~E~~~~G  507 (513)
                      ++++|.. +.+|||||||++|
T Consensus       401 l~~~~~~-~~~~lv~E~~~~g  420 (613)
T 2ozo_A          401 LIGVCQA-EALMLVMEMAGGG  420 (613)
T ss_dssp             EEEEEES-SSEEEEEECCTTC
T ss_pred             EEEEecc-CCeEEEEEeCCCC
Confidence            9999976 5699999999997

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.95  E-value=1e-29  Score=252.96  Aligned_cols=165  Identities=25%  Similarity=0.416  Sum_probs=130.4

Q ss_pred             CCCCcHHHHHHhcCC-------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHEN-------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      |++|||.+||+.+..             ...+++..+..|+.|||.||+|||+++||||||||+|||+           +
T Consensus       111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl-----------~  179 (308)
T 4gt4_A          111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV-----------Y  179 (308)
T ss_dssp             CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE-----------C
T ss_pred             CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE-----------C
Confidence            689999999986431             1247899999999999999999999999999999999444           4


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                      .+..+||            +|||+++-.                                                    
T Consensus       180 ~~~~~Ki------------~DFGlar~~----------------------------------------------------  195 (308)
T 4gt4_A          180 DKLNVKI------------SDLGLFREV----------------------------------------------------  195 (308)
T ss_dssp             GGGCEEE------------CCSCCBCGG----------------------------------------------------
T ss_pred             CCCCEEE------------CCcccceec----------------------------------------------------
Confidence            4456677            999998710                                                    


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                            ..             ...+...              ....|++.|||||++....|+.++|||||||++|||+|
T Consensus       196 ------~~-------------~~~~~~~--------------~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t  242 (308)
T 4gt4_A          196 ------YA-------------ADYYKLL--------------GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS  242 (308)
T ss_dssp             ------GG-------------GGCBCSS--------------SSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             ------cC-------------CCceeEe--------------cccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHh
Confidence                  00             0000000              00124556778888888899999999999999999999


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +|..||.+.++.+++..|.++.+++.|            +||..++..||++.+++..
T Consensus       243 ~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          243 YGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             TTCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            899999999999999999888887766            5899999999999998764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.95  E-value=1.1e-29  Score=251.75  Aligned_cols=164  Identities=27%  Similarity=0.551  Sum_probs=129.3

Q ss_pred             CCCCcHHHHHHhcC----------CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccC
Q psy17476          1 MRHGSLLNYLRRHE----------NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMI   70 (513)
Q Consensus         1 ~~~g~L~~~l~~~~----------~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~   70 (513)
                      |++|||.++|+++.          ....+++..+..|+.|||.||+|||+++||||||||+|||+           +.+.
T Consensus        97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl-----------~~~~  165 (299)
T 4asz_A           97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV-----------GENL  165 (299)
T ss_dssp             CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE-----------CGGG
T ss_pred             CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE-----------CCCC
Confidence            68999999998753          12257999999999999999999999999999999999544           4445


Q ss_pred             CCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEE
Q psy17476         71 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEY  150 (513)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  150 (513)
                      .+||            +|||+++-.                                                       
T Consensus       166 ~~Ki------------~DFGla~~~-------------------------------------------------------  178 (299)
T 4asz_A          166 LVKI------------GDFGMSRDV-------------------------------------------------------  178 (299)
T ss_dssp             CEEE------------CCCSCHHHH-------------------------------------------------------
T ss_pred             cEEE------------CCcccceec-------------------------------------------------------
Confidence            5677            999998710                                                       


Q ss_pred             EEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCC
Q psy17476        151 EVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGK  230 (513)
Q Consensus       151 ~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~  230 (513)
                         .             .+      +......        ...|++.|||||++....|+.++|||||||++|||+|+|+
T Consensus       179 ---~-------------~~------~~~~~~~--------~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~  228 (299)
T 4asz_A          179 ---Y-------------ST------DYYRVGG--------HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK  228 (299)
T ss_dssp             ---T-------------GG------GCEEETT--------TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             ---C-------------CC------CceeecC--------ceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCC
Confidence               0             00      0000000        0114456778888888899999999999999999999899


Q ss_pred             CCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        231 MPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       231 ~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      .||...++.+++..+.++.+++.|            .||..++..||++.+++.
T Consensus       229 ~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~  282 (299)
T 4asz_A          229 QPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHT  282 (299)
T ss_dssp             CTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999888877766            589999999999998754

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.95  E-value=3.6e-29  Score=251.30  Aligned_cols=165  Identities=30%  Similarity=0.532  Sum_probs=127.0

Q ss_pred             CCCCcHHHHHHhcCC------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCc
Q psy17476          1 MRHGSLLNYLRRHEN------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQ   68 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~   68 (513)
                      |++|||.+||+++..            ..++++..+..|+.|||.||+|||+++||||||||+|||+           +.
T Consensus       125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl-----------~~  193 (329)
T 4aoj_A          125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV-----------GQ  193 (329)
T ss_dssp             CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE-----------ET
T ss_pred             CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE-----------CC
Confidence            689999999988542            2257999999999999999999999999999999999544           44


Q ss_pred             cCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCC
Q psy17476         69 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGA  148 (513)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  148 (513)
                      +..+||            +|||+++-..                                                    
T Consensus       194 ~~~~Ki------------~DFGla~~~~----------------------------------------------------  209 (329)
T 4aoj_A          194 GLVVKI------------GDFGMSRDIY----------------------------------------------------  209 (329)
T ss_dssp             TTEEEE------------CCCC----------------------------------------------------------
T ss_pred             CCcEEE------------cccccceecc----------------------------------------------------
Confidence            445677            9999987100                                                    


Q ss_pred             EEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeec
Q psy17476        149 EYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTC  228 (513)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~  228 (513)
                            ..+. ......                          ..|++.|||||++....|+.++|||||||++|||+|+
T Consensus       210 ------~~~~-~~~~~~--------------------------~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~  256 (329)
T 4aoj_A          210 ------STDY-YRVGGR--------------------------TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTY  256 (329)
T ss_dssp             -------------------------------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             ------CCCc-ceecCc--------------------------ccccccccChhhhcCCCCCccccccchHHHHHHHHcC
Confidence                  0000 000000                          1245566777888888999999999999999999998


Q ss_pred             CCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        229 GKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       229 g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      |+.||...++.+++..+.++.+++.|            +||..++..||++.+++..
T Consensus       257 G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          257 GKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             SCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            99999999999999999888887776            4899999999999998754

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.95  E-value=5.1e-26  Score=248.42  Aligned_cols=245  Identities=24%  Similarity=0.464  Sum_probs=187.2

Q ss_pred             CCcCCCCCCHHHHHHHHcCC-CCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhh--
Q psy17476        255 KAWYVGDMSRQRAESILKQE-DKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPE--  330 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~-~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~--  330 (513)
                      .+|+++.++|.+|+++|... .++|.||||+|++ .+.|+||++.   ...++||+|....+|.|++.....+.++.+  
T Consensus        13 ~~Wy~g~isr~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~lsv~~---~~~v~h~~i~~~~~g~~~~~~~~~f~sl~~Lv   89 (635)
T 4fl3_A           13 LPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAH---GRKAHHYTIERELNGTYAIAGGRTHASPADLC   89 (635)
T ss_dssp             CTTBCBSCCHHHHHHHHHHTTCCTTEEEEEECTTSSSCEEEEEEE---TTEEEEEEEEECTTSCEESTTCCCBSSHHHHH
T ss_pred             CCccCCCCCHHHHHHHHhcCCCCCceEEEeecccCCCCEEEEEEe---CCEEEeEEEEEcCCCCEEeCCCCccCCHHHHH
Confidence            46999999999999988753 4699999999976 8999999988   678999999998889888855544433221  


Q ss_pred             --------------------------------------------------------------------------------
Q psy17476        331 --------------------------------------------------------------------------------  330 (513)
Q Consensus       331 --------------------------------------------------------------------------------  330 (513)
                                                                                                      
T Consensus        90 ~~y~~~~~~l~~~L~~p~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~e~~i~~~~~~~~~~~~~~~~~~~~Wy  169 (635)
T 4fl3_A           90 HYHSQESDGLVCLLKKPFNRPQGVQPKTGPFEDLKENLIREYVKQTWNLQGQALEQAIISQKPQLEKLIATTAHEKMPWF  169 (635)
T ss_dssp             HHHTTCCTTSSSCCCEECCCCTTCCCBCSHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTSCGGGSTTB
T ss_pred             HHHhhCCCCCeeccCCcCCCccCCCCCCCCcchhhhHHHHHHHHHHHhcccchhhhhccCCCchhhhhhcccccccCCce
Confidence                                                                                            


Q ss_pred             -----------hhc----cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccc
Q psy17476        331 -----------VKD----KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRH  395 (513)
Q Consensus       331 -----------~l~----~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~  395 (513)
                                 +|.    .+|.||||.|+..|.|+|++..   .+.++|++|....+|.|++.+...|.++.+||+||..
T Consensus       170 ~g~isr~~ae~~L~~~~~~~G~FLvR~s~~~g~y~lsv~~---~~~v~h~~i~~~~~g~~~~~~~~~F~sl~~Lv~~y~~  246 (635)
T 4fl3_A          170 HGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLH---EGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSY  246 (635)
T ss_dssp             CCSCCHHHHHHHHHSSSCCTTCEEEEESSSSSCEEEEEEE---TTEEEEEEEEECTTSCEESTTCCCBSSHHHHHHHHTT
T ss_pred             eccCCHHHHHHHHHcCCCCCceEEEEecCCCCCEEEEEEE---CCEEEEEEEEECCCCCEEeCCCCccCCHHHHHHHhhh
Confidence                       121    2799999999777999999987   5789999999888899999888899999999999999


Q ss_pred             cCCCCccccCcCCCCCCC----------CCcc------------------------------------------------
Q psy17476        396 NSGGLASRLKTSPCDRPV----------PATA------------------------------------------------  417 (513)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~----------~~~~------------------------------------------------  417 (513)
                      ++++++..+.. ||++..          |...                                                
T Consensus       247 ~~~~l~~~L~~-p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (635)
T 4fl3_A          247 KADGLLRVLTV-PCQKIGTQGNVNFGGRPQLPGSHPATWSAGGIISRIKSYSFPKPGHRKSSPAQGNRQESTVSFNPYEP  325 (635)
T ss_dssp             CCTTSSSCCCS-BCCC----------------------------------------------------------------
T ss_pred             CCCCCccccCc-cCcCccccccccccCCCCCCCcCccccccccccccccccccCCccccccccccccCCcccccCCCCCC
Confidence            99888877642 332210          0000                                                


Q ss_pred             -------------------------------cCCCCccccCCcCceeEe-EecccccceEEEEEEeC--ceeeEEeecCC
Q psy17476        418 -------------------------------GLSHDKWEIDPAELMLLE-ELGSGQFGVVRRGKWRG--SIDVAMMKEGT  463 (513)
Q Consensus       418 -------------------------------~~~~~~~~~~~~~~~~~~-~lG~G~fG~V~~g~~~~--~~~v~~~k~~~  463 (513)
                                                     .+....|.++...+.+.. .||+|+||.||+|.+..  ....+++|...
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~  405 (635)
T 4fl3_A          326 ELAPWAADKGPQREALPMDTEVFESPFADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILK  405 (635)
T ss_dssp             ------------CCCCGGGSTTSSCTTCSTTSCCCSSSBCCGGGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEEC
T ss_pred             CCCccccccCcccccCCCcccccccccCChhHcCcccccccchhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEec
Confidence                                           000123445555555544 89999999999997753  33444444322


Q ss_pred             C------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccCCCC
Q psy17476        464 M------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       464 ~------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~~~G  507 (513)
                      .      ..++|.+|+++|++++|||||+++++|.. +..+||||||++|
T Consensus       406 ~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g  454 (635)
T 4fl3_A          406 NEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELG  454 (635)
T ss_dssp             GGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTE
T ss_pred             cccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCC
Confidence            1      13679999999999999999999999975 5689999999987

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.94  E-value=6.1e-29  Score=251.82  Aligned_cols=165  Identities=26%  Similarity=0.434  Sum_probs=127.4

Q ss_pred             CCCCcHHHHHHhcCC-------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHEN-------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      |++|||.+||+++..             ...+++..+..|+.|||+||+|||+++||||||||+|||++.          
T Consensus       151 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~----------  220 (353)
T 4ase_A          151 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE----------  220 (353)
T ss_dssp             CTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG----------
T ss_pred             CCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCC----------
Confidence            689999999987532             124789999999999999999999999999999999954444          


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                       +..+||            +|||+++-.                                                    
T Consensus       221 -~~~vKi------------~DFGlar~~----------------------------------------------------  235 (353)
T 4ase_A          221 -KNVVKI------------CDFGLARDI----------------------------------------------------  235 (353)
T ss_dssp             -GGCEEE------------CCCGGGSCT----------------------------------------------------
T ss_pred             -CCCEEE------------Ccchhhhhc----------------------------------------------------
Confidence             445677            999998710                                                    


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                            .             ..     +.+....         .+.|++.|||||++....|+.++|||||||++|||+|
T Consensus       236 ------~-------------~~-----~~~~~~~---------~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t  282 (353)
T 4ase_A          236 ------Y-------------KD-----PDYVRKG---------DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS  282 (353)
T ss_dssp             ------T-------------TC-----TTSEEET---------TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTT
T ss_pred             ------c-------------cC-----CCceeec---------cccccccccCHHHHhcCCCCCcccEeehHHHHHHHHh
Confidence                  0             00     0000000         0114456778888888899999999999999999999


Q ss_pred             cCCCCCCCCCc-ceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKN-TEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~-~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +|..||.+.+. ..+...+.++.+++.|            .||..++..||++.+++.+
T Consensus       283 ~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          283 LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             TSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            89999988764 4556677778877766            5899999999999998865

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.94  E-value=1.4e-28  Score=246.57  Aligned_cols=165  Identities=15%  Similarity=0.190  Sum_probs=124.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |+||+|.++|++.+   .+++..++.|++||+.||+|||+++||||||||+|||++.++          ...||      
T Consensus       132 ~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g----------~~vKl------  192 (336)
T 4g3f_A          132 LEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG----------SRAAL------  192 (336)
T ss_dssp             CTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTS----------CCEEE------
T ss_pred             cCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCC----------CEEEE------
Confidence            57999999999875   479999999999999999999999999999999996555443          23466      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-.                                                          .....  
T Consensus       193 ------~DFGla~~~----------------------------------------------------------~~~~~--  206 (336)
T 4g3f_A          193 ------CDFGHALCL----------------------------------------------------------QPDGL--  206 (336)
T ss_dssp             ------CCCTTCEEC-----------------------------------------------------------------
T ss_pred             ------eeCCCCeEc----------------------------------------------------------cCCCc--
Confidence                  899998710                                                          00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                             +. ......              .+-|+|.+||||++....|+.++||||+||++|||+| |..||...+..+
T Consensus       207 -------~~-~~~~~~--------------~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemlt-G~~Pf~~~~~~~  263 (336)
T 4g3f_A          207 -------GK-SLLTGD--------------YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN-GCHPWTQYFRGP  263 (336)
T ss_dssp             ---------------C--------------CCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSSTTTCCSC
T ss_pred             -------cc-ceecCC--------------ccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHH-CcCCCCCCCHHH
Confidence                   00 000000              1236777788888888899999999999999999999 999999888888


Q ss_pred             eccccccccccC--CC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILE--KP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~--~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...|.++..+.  .|            +||..++..|+++.+++.+
T Consensus       264 ~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~  310 (336)
T 4g3f_A          264 LCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRK  310 (336)
T ss_dssp             CHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            887776543321  11            4788899999999988754

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.94  E-value=1e-28  Score=245.10  Aligned_cols=165  Identities=27%  Similarity=0.392  Sum_probs=116.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |+||||.++|+.....  +++..+..|+.|||.||+|||+++||||||||+|||++.           +..+||      
T Consensus       113 ~~gGsL~~~l~~~~~~--l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~-----------~~~~Ki------  173 (307)
T 3omv_A          113 CEGSSLYKHLHVQETK--FQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE-----------GLTVKI------  173 (307)
T ss_dssp             CSSCBHHHHHHTSCCC--CCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEET-----------TEEEEE------
T ss_pred             CCCCCHHHHHhhcCCC--CCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECC-----------CCcEEE------
Confidence            6899999999886543  689999999999999999999999999999999955444           345577      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-..-                                                          ... .
T Consensus       174 ------~DFGla~~~~~----------------------------------------------------------~~~-~  188 (307)
T 3omv_A          174 ------GDFGLATVKSR----------------------------------------------------------WSG-S  188 (307)
T ss_dssp             ------CCCSSCBC------------------------------------------------------------------
T ss_pred             ------eeccCceeccc----------------------------------------------------------CCc-c
Confidence                  99999871000                                                          000 0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......||..|||||++...                       ....|+.++|||||||++|||+| |+.||...++.+
T Consensus       189 ~~~~~~~GT~~ymAPE~l~~~-----------------------~~~~y~~ksDVwS~Gvvl~Ellt-g~~Pf~~~~~~~  244 (307)
T 3omv_A          189 QQVEQPTGSVLWMAPEVIRMQ-----------------------DNNPFSFQSDVYSYGIVLYELMT-GELPYSHINNRD  244 (307)
T ss_dssp             -----CCCCTTSCCHHHHHCC-----------------------SSCCCCHHHHHHHHHHHHHHHHH-SSCTTTTCCCHH
T ss_pred             eeecccccCCCccCHHHhhcc-----------------------CCCCCCcHHHhHhHHHHHHHHHH-CCCCCCCCChHH
Confidence            001122355555554443211                       12368999999999999999999 999998876644


Q ss_pred             e-ccccccccccCC--------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 V-VDRVQRGIILEK--------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~-~~~i~~~~~~~~--------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      . ...+.++...|.        |        +||..++..||++.+++..
T Consensus       245 ~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          245 QIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             HHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             HHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            3 344444443321        1        5899999999999987653

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.94  E-value=1.2e-28  Score=248.32  Aligned_cols=161  Identities=19%  Similarity=0.311  Sum_probs=127.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ++||||.++|.+.+.. .+++..++.|++||+.||+|||++|||||||||+|||++.++           ..||      
T Consensus       105 ~~gg~L~~~i~~~~~~-~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g-----------~vKl------  166 (350)
T 4b9d_A          105 CEGGDLFKRINAQKGV-LFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG-----------TVQL------  166 (350)
T ss_dssp             CTTCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTC-----------CEEE------
T ss_pred             CCCCcHHHHHHHcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC-----------CEEE------
Confidence            5799999999876543 468899999999999999999999999999999996655554           3466      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-.                                                          +....  
T Consensus       167 ------~DFGla~~~----------------------------------------------------------~~~~~--  180 (350)
T 4b9d_A          167 ------GDFGIARVL----------------------------------------------------------NSTVE--  180 (350)
T ss_dssp             ------CSTTEESCC----------------------------------------------------------CHHHH--
T ss_pred             ------cccccceee----------------------------------------------------------cCCcc--
Confidence                  899998710                                                          00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ....                          +-|++.+||||++....|+.++||||+||++|||+| |+.||...+..+
T Consensus       181 -~~~~--------------------------~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemlt-G~~PF~~~~~~~  232 (350)
T 4b9d_A          181 -LARA--------------------------CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT-LKHAFEAGSMKN  232 (350)
T ss_dssp             -HHHH--------------------------HHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCSCCCSSHHH
T ss_pred             -cccc--------------------------cCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCcCHHH
Confidence             0000                          115666777888888899999999999999999999 999999998888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++..+.++..++.+            +||..++..|++++++|.+
T Consensus       233 ~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          233 LVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            88888777665544            4788899999999999875

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.94  E-value=4e-28  Score=239.02  Aligned_cols=157  Identities=24%  Similarity=0.412  Sum_probs=116.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcc--eeccccCcccccccCccccccccCCccCCCceEEEe
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHN--YIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVAL   78 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~--iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~   78 (513)
                      |+||+|.++|+++.   .+++..++.|++||+.||+|||+++  ||||||||+|||++          +.+...||    
T Consensus       111 ~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~----------~~~g~vKl----  173 (290)
T 3fpq_A          111 MTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT----------GPTGSVKI----  173 (290)
T ss_dssp             CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES----------STTSCEEE----
T ss_pred             CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE----------CCCCCEEE----
Confidence            68999999999875   4689999999999999999999999  99999999995443          33345567    


Q ss_pred             ccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCc
Q psy17476         79 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE  158 (513)
Q Consensus        79 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  158 (513)
                              +|||+++-.                                                  .+        +  
T Consensus       174 --------~DFGla~~~--------------------------------------------------~~--------~--  185 (290)
T 3fpq_A          174 --------GDLGLATLK--------------------------------------------------RA--------S--  185 (290)
T ss_dssp             --------CCTTGGGGC--------------------------------------------------CT--------T--
T ss_pred             --------EeCcCCEeC--------------------------------------------------CC--------C--
Confidence                    899998610                                                  00        0  


Q ss_pred             cceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc
Q psy17476        159 HWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN  238 (513)
Q Consensus       159 ~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~  238 (513)
                         ......||+.||||                          |++.. +|+.++|||||||++|||+| |+.||....+
T Consensus       186 ---~~~~~~GTp~YmAP--------------------------E~~~~-~y~~~~DiwSlGvilyellt-g~~Pf~~~~~  234 (290)
T 3fpq_A          186 ---FAKAVIGTPEFMAP--------------------------EMYEE-KYDESVDVYAFGMCMLEMAT-SEYPYSECQN  234 (290)
T ss_dssp             ---SBEESCSSCCCCCG--------------------------GGGGT-CCCTHHHHHHHHHHHHHHHH-SSCTTTTCSS
T ss_pred             ---ccCCcccCccccCH--------------------------HHcCC-CCCcHHHHHHHHHHHHHHHH-CCCCCCCCCc
Confidence               01122355555555                          44433 68999999999999999999 9999976544


Q ss_pred             -ceeccccccccccCC-C------------CCcCCCCCCHHHHHHHHcC
Q psy17476        239 -TEVVDRVQRGIILEK-P------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       239 -~~~~~~i~~~~~~~~-p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                       ..+...+..+.+++. +            +||..++..|+++.++|.+
T Consensus       235 ~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          235 AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             HHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             445555655543321 1            4789999999999999986

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.94  E-value=5.7e-28  Score=242.97  Aligned_cols=158  Identities=16%  Similarity=0.317  Sum_probs=123.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |+||+|.+++.+.    .+++..++.|++||+.||+|||++|||||||||+|||++.++           ..||      
T Consensus       153 ~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g-----------~vKl------  211 (346)
T 4fih_A          153 LEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG-----------RVKL------  211 (346)
T ss_dssp             CTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-----------CEEE------
T ss_pred             CCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCC-----------CEEE------
Confidence            5799999999864    368999999999999999999999999999999996665554           3466      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-                                                          +.....  
T Consensus       212 ------~DFGla~~----------------------------------------------------------~~~~~~--  225 (346)
T 4fih_A          212 ------SDFGFCAQ----------------------------------------------------------VSKEVP--  225 (346)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCSSSC--
T ss_pred             ------ecCcCcee----------------------------------------------------------cCCCCC--
Confidence                  89999861                                                          000000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ....                          +-|+|.+||||++....|+.++||||+||++|||++ |..||.+.+..+
T Consensus       226 -~~~~--------------------------~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~-G~~PF~~~~~~~  277 (346)
T 4fih_A          226 -RRKS--------------------------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPYFNEPPLK  277 (346)
T ss_dssp             -CBCC--------------------------CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHH
T ss_pred             -cccc--------------------------cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCcCHHH
Confidence             0011                          125666777788888899999999999999999999 999999888888


Q ss_pred             eccccccccccCCC--------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP--------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p--------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++..|..+..+..+              .||..++..|++++++|.+
T Consensus       278 ~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          278 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             HHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            88877655433222              4688899999999999876

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.93  E-value=6.8e-28  Score=238.69  Aligned_cols=159  Identities=19%  Similarity=0.255  Sum_probs=121.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ++||||.++|.++.   .+++..++.+++||+.||+|||++|||||||||+|||++.++           ..|+      
T Consensus       108 ~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g-----------~vKl------  167 (304)
T 3ubd_A          108 LRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG-----------HIKL------  167 (304)
T ss_dssp             CTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCC-----------CEEe------
Confidence            57999999999875   468999999999999999999999999999999996655554           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                         +...   
T Consensus       168 ------~DFGla~~~~---------------------------------------------------------~~~~---  181 (304)
T 3ubd_A          168 ------TDFGLSKESI---------------------------------------------------------DHEK---  181 (304)
T ss_dssp             ------ESSEEEEC--------------------------------------------------------------C---
T ss_pred             ------cccccceecc---------------------------------------------------------CCCc---
Confidence                  8999886100                                                         0000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ...                          .+-|+|.+||||++....|+.++||||+||++|||+| |+.||.+.+..+
T Consensus       182 -~~~--------------------------~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemlt-G~~PF~~~~~~~  233 (304)
T 3ubd_A          182 -KAY--------------------------SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKE  233 (304)
T ss_dssp             -CCC--------------------------SCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -ccc--------------------------ccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHh-CCCCCCCcCHHH
Confidence             000                          1225667777888888899999999999999999999 999999988888


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHHH-----HHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQR-----AESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~~-----aeeLL~~  273 (513)
                      ++..+.++....++           +||..++..|++     +++++.+
T Consensus       234 ~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H  282 (304)
T 3ubd_A          234 TMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH  282 (304)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred             HHHHHHcCCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence            88888665433222           367777777776     3667765

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.93  E-value=6.7e-28  Score=238.92  Aligned_cols=137  Identities=16%  Similarity=0.263  Sum_probs=106.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ++||+|.++|++++   .+++..++.|++||+.||+|||+++||||||||+|||++.++           ..|+      
T Consensus       114 ~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g-----------~vKl------  173 (311)
T 4aw0_A          114 AKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM-----------HIQI------  173 (311)
T ss_dssp             CTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS-----------CEEE------
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCC-----------CEEE------
Confidence            57899999999875   469999999999999999999999999999999996555544           4466      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-                                                          +..... .
T Consensus       174 ------~DFGla~~----------------------------------------------------------~~~~~~-~  188 (311)
T 4aw0_A          174 ------TDFGTAKV----------------------------------------------------------LSPESK-Q  188 (311)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCTTTT-C
T ss_pred             ------EEcCCcee----------------------------------------------------------cCCCCC-c
Confidence                  89999860                                                          000000 0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ......                          -|+|.+||||++....|+.++||||+||++|||++ |..||...+..+
T Consensus       189 ~~~~~~--------------------------~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~-G~~PF~~~~~~~  241 (311)
T 4aw0_A          189 ARANSF--------------------------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPFRAGNEGL  241 (311)
T ss_dssp             CCBCCC--------------------------CSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             ccccCc--------------------------ccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence            000111                          25666677777777889999999999999999999 999999888888


Q ss_pred             ecccccccc
Q psy17476        241 VVDRVQRGI  249 (513)
Q Consensus       241 ~~~~i~~~~  249 (513)
                      +...|.++.
T Consensus       242 ~~~~i~~~~  250 (311)
T 4aw0_A          242 IFAKIIKLE  250 (311)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHcCC
Confidence            888886654

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.93  E-value=2.7e-27  Score=243.91  Aligned_cols=158  Identities=16%  Similarity=0.317  Sum_probs=123.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |+||+|.++++..    .+++..++.|++||+.||+|||++|||||||||+|||++.++           ..||      
T Consensus       230 ~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g-----------~vKl------  288 (423)
T 4fie_A          230 LEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG-----------RVKL------  288 (423)
T ss_dssp             CTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTC-----------CEEE------
T ss_pred             CCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCC-----------CEEE------
Confidence            5799999999764    368999999999999999999999999999999996665554           3466      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-                                                          +.....  
T Consensus       289 ------~DFGla~~----------------------------------------------------------~~~~~~--  302 (423)
T 4fie_A          289 ------SDFGFCAQ----------------------------------------------------------VSKEVP--  302 (423)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCSSCC--
T ss_pred             ------ecCccceE----------------------------------------------------------CCCCCc--
Confidence                  89998860                                                          000000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ....                          +-|++.|||||++....|+.++||||+||++|||++ |..||.+.+..+
T Consensus       303 -~~~~--------------------------~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~-G~~PF~~~~~~~  354 (423)
T 4fie_A          303 -RRKS--------------------------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPYFNEPPLK  354 (423)
T ss_dssp             -CBCC--------------------------CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHH
T ss_pred             -cccc--------------------------cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCcCHHH
Confidence             0000                          125666777888888899999999999999999999 999999988888


Q ss_pred             eccccccccccCCC--------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP--------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p--------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++..|..+..+..+              .||..++..|+++.++|.+
T Consensus       355 ~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          355 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             HHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            88877655332222              4788899999999999876

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.92  E-value=5.6e-27  Score=228.95  Aligned_cols=156  Identities=17%  Similarity=0.303  Sum_probs=114.7

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.++|.++.   .+++..++.+++||+.||+|||++|||||||||+|||++.++           ..|+        
T Consensus        96 ~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~-----------~vkl--------  153 (275)
T 3hyh_A           96 GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHL-----------NVKI--------  153 (275)
T ss_dssp             CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTC-----------CEEE--------
T ss_pred             CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCC-----------CEEE--------
Confidence            789999998865   479999999999999999999999999999999996555443           4456        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          +|||+++-..                                                          ...    .
T Consensus       154 ----~DFGla~~~~----------------------------------------------------------~~~----~  167 (275)
T 3hyh_A          154 ----ADFGLSNIMT----------------------------------------------------------DGN----F  167 (275)
T ss_dssp             ----CCSSCC----------------------------------------------------------------------
T ss_pred             ----eecCCCeecC----------------------------------------------------------CCC----c
Confidence                8999886100                                                          000    0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccc-cccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRF-SSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      .....                          |+|.+||||++....| +.++||||+||++|||+| |+.||...+..++
T Consensus       168 ~~~~~--------------------------GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~llt-g~~PF~~~~~~~~  220 (275)
T 3hyh_A          168 LKTSC--------------------------GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC-RRLPFDDESIPVL  220 (275)
T ss_dssp             ---------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHH
T ss_pred             cCCee--------------------------ECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHH-CCCCCCCCCHHHH
Confidence            01122                          4455556666666665 578999999999999999 9999998887777


Q ss_pred             ccccccccccCCC-----------CCcCCCCCCHHHHHHHHcC
Q psy17476        242 VDRVQRGIILEKP-----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       242 ~~~i~~~~~~~~p-----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ...+.++....+.           +++..++..|++++++|.+
T Consensus       221 ~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          221 FKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             HHHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            7777655433222           4678888889999888875

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.92  E-value=4.9e-26  Score=226.36  Aligned_cols=66  Identities=26%  Similarity=0.341  Sum_probs=56.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhc--------ceeccccCcccccccCccccccccCCccCCC
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERH--------NYIHRETKKSLYPSSLNEISFILWPDQMIRP   72 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~--------~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~   72 (513)
                      |++|||.++|+++    +++++.+..++.|+|.||+|||++        +||||||||+|||++           .+..+
T Consensus        83 ~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~-----------~~~~~  147 (303)
T 3hmm_A           83 HEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-----------KNGTC  147 (303)
T ss_dssp             CTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEEC-----------TTSCE
T ss_pred             CCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEEC-----------CCCCE
Confidence            6899999999875    368899999999999999999987        899999999995444           44456


Q ss_pred             ceEEEeccccccCCCCccccc
Q psy17476         73 KVVVALYPFKAIEGGDLSLEK   93 (513)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~   93 (513)
                      ||            +|||+++
T Consensus       148 Ki------------~DFGla~  156 (303)
T 3hmm_A          148 CI------------ADLGLAV  156 (303)
T ss_dssp             EE------------CCCTTCE
T ss_pred             EE------------EeCCCCc
Confidence            77            9999986

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.89  E-value=3.2e-25  Score=219.78  Aligned_cols=171  Identities=18%  Similarity=0.283  Sum_probs=111.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++++++......++..++.|++||+.||+|||++|||||||||+|||++.++           ..|+      
T Consensus        97 ~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~-----------~vKl------  159 (299)
T 4g31_A           97 CRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-----------VVKV------  159 (299)
T ss_dssp             CCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-----------CEEE------
T ss_pred             CCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCC-----------cEEE------
Confidence            47899999999865432345567899999999999999999999999999996665554           3466      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-..-.                                                 ...          
T Consensus       160 ------~DFGla~~~~~~-------------------------------------------------~~~----------  174 (299)
T 4g31_A          160 ------GDFGLVTAMDQD-------------------------------------------------EEE----------  174 (299)
T ss_dssp             ------CCCCCC--------------------------------------------------------------------
T ss_pred             ------ccCccceecCCC-------------------------------------------------ccc----------
Confidence                  899998710000                                                 000          


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc-c
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-T  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~-~  239 (513)
                             .+...-.+....         ....-|+|.+||||++....|+.++||||+||++|||++    ||..... .
T Consensus       175 -------~~~~~~~~~~~~---------~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~----Pf~~~~~~~  234 (299)
T 4g31_A          175 -------QTVLTPMPAYAR---------HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY----PFSTQMERV  234 (299)
T ss_dssp             ---------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS----CCSSHHHHH
T ss_pred             -------cccccccccccc---------cCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc----CCCCccHHH
Confidence                   000000000000         001226777788888888899999999999999999996    7754321 2


Q ss_pred             eeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+..+.....++..            .||..++..||++.++|.+
T Consensus       235 ~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  280 (299)
T 4g31_A          235 RTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN  280 (299)
T ss_dssp             HHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            223333333222111            4789999999999999986

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.89  E-value=1.1e-24  Score=224.30  Aligned_cols=134  Identities=15%  Similarity=0.243  Sum_probs=98.3

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.++|.++.   ++++..++.|++||+.||+|||++|||||||||+|||++.++           ..|+        
T Consensus       142 ~g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~-----------~~Ki--------  199 (398)
T 4b99_A          142 ESDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC-----------ELKI--------  199 (398)
T ss_dssp             SEEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTC-----------CEEE--------
T ss_pred             CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCC-----------CEEE--------
Confidence            589999998765   579999999999999999999999999999999996665554           3455        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          +|||+++...-...                                                         ..-..
T Consensus       200 ----~DFGla~~~~~~~~---------------------------------------------------------~~~~~  218 (398)
T 4b99_A          200 ----GDFGMARGLCTSPA---------------------------------------------------------EHQYF  218 (398)
T ss_dssp             ----CCCTTCBCC----------------------------------------------------------------CCC
T ss_pred             ----eecceeeecccCcc---------------------------------------------------------ccccc
Confidence                89999872100000                                                         00000


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccc-cccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYT-RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      .....                          |++.+||||++... .|+.++||||+||++|||++ |+.||.+.+..+.
T Consensus       219 ~~~~~--------------------------GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~-G~~pF~g~~~~~~  271 (398)
T 4b99_A          219 MTEYV--------------------------ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA-RRQLFPGKNYVHQ  271 (398)
T ss_dssp             CCSSC--------------------------CCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH-TSCSSCCSSHHHH
T ss_pred             cccce--------------------------eChHhcCHHHhcCCCCCCChhheehhHHHHHHHHH-CCCCCCCCCHHHH
Confidence            01112                          45555666665553 56999999999999999999 9999998887776


Q ss_pred             ccccc
Q psy17476        242 VDRVQ  246 (513)
Q Consensus       242 ~~~i~  246 (513)
                      +..|.
T Consensus       272 l~~I~  276 (398)
T 4b99_A          272 LQLIM  276 (398)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.89  E-value=1.8e-24  Score=233.13  Aligned_cols=123  Identities=17%  Similarity=0.246  Sum_probs=94.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |+||+|.++|.+++   .+++..++.|++||+.||+|||++|||||||||+|||++.+|           ..||      
T Consensus       274 ~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G-----------~vKL------  333 (689)
T 3v5w_A          274 MNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG-----------HVRI------  333 (689)
T ss_dssp             CCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCC-----------CEEe------
Confidence            57999999999875   468999999999999999999999999999999996665554           3456      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++.                                                          ....    
T Consensus       334 ------~DFGlA~~----------------------------------------------------------~~~~----  345 (689)
T 3v5w_A          334 ------SDLGLACD----------------------------------------------------------FSKK----  345 (689)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CSSC----
T ss_pred             ------cccceeee----------------------------------------------------------cCCC----
Confidence                  89999861                                                          0000    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcc-cccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLN-YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                       .....+                          |+|.+||||++. ...|+.++|+||+||++|||++ |..||...+..
T Consensus       346 -~~~t~~--------------------------GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLt-G~~PF~~~~~~  397 (689)
T 3v5w_A          346 -KPHASV--------------------------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR-GHSPFRQHKTK  397 (689)
T ss_dssp             -CCCSCC--------------------------SCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHH-SSCTTCGGGCC
T ss_pred             -CCCCcc--------------------------CCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCChH
Confidence             001122                          445555566664 3478999999999999999999 99999765443

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.89  E-value=3.7e-24  Score=230.66  Aligned_cols=161  Identities=21%  Similarity=0.280  Sum_probs=122.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |+||+|.++|.+...  .+++..++.|++||+.||+|||+++||||||||+|||++.+.         ....|+      
T Consensus       236 ~~gg~L~~~i~~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~---------~~~vKl------  298 (573)
T 3uto_A          236 MSGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKR---------SNELKL------  298 (573)
T ss_dssp             CCCCBHHHHHTCTTS--CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS---------CCCEEE------
T ss_pred             cCCCcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCC---------CCCEEE------
Confidence            579999999976543  369999999999999999999999999999999996554331         123455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-                                                 +..+..           
T Consensus       299 ------~DFG~a~~-------------------------------------------------~~~~~~-----------  312 (573)
T 3uto_A          299 ------IDFGLTAH-------------------------------------------------LDPKQS-----------  312 (573)
T ss_dssp             ------CCCSSCEE-------------------------------------------------CCTTSE-----------
T ss_pred             ------eeccceeE-------------------------------------------------ccCCCc-----------
Confidence                  89998861                                                 000000           


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        .....                          |++.+||||++....|+.++||||+||++|||++ |..||.+.+..+
T Consensus       313 --~~~~~--------------------------GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~-G~~Pf~~~~~~~  363 (573)
T 3uto_A          313 --VKVTT--------------------------GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS-GLSPFGGENDDE  363 (573)
T ss_dssp             --EEEEC--------------------------SSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH-SCCSSCCSSHHH
T ss_pred             --eeeeE--------------------------ECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCcCHHH
Confidence              01112                          4556677777888899999999999999999999 999999998888


Q ss_pred             eccccccccccCCC---------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP---------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p---------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++..|.++.....+               +|+..++..|+.+.++|.+
T Consensus       364 ~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          364 TLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             HHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            88887655332221               4677888899999999886

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.87  E-value=3.2e-22  Score=205.00  Aligned_cols=180  Identities=28%  Similarity=0.516  Sum_probs=130.0

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      .+|+||.++|..|+++|.   .+|.||||+|++...|++|++.                                     
T Consensus        13 ~~wyhg~i~r~~a~~lL~---~~G~flvR~s~~~~~~~lsv~~-------------------------------------   52 (377)
T 3cbl_A           13 QLWYHGAIPRAEVAELLV---HSGDFLVRESQGKQEYVLSVLW-------------------------------------   52 (377)
T ss_dssp             CTTBCTTCCHHHHHHHCC---STTEEEEEECC--CCEEEEC---------------------------------------
T ss_pred             CCccCCCCCHHHHHHHHh---cCCCEEEEEeCCCCcEEEEEEE-------------------------------------
Confidence            469999999999999996   5799999999774488888654                                     


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCCCCCC
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRPVP  414 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~~~~~  414 (513)
                                              .+.++|+.|.... + ++..+...|+++++++++|.....++.....       ..
T Consensus        53 ------------------------~~~~~h~~i~~~~-~-~~~~~~~~F~sl~~LI~~y~~~~~~l~~~~~-------~~   99 (377)
T 3cbl_A           53 ------------------------DGLPRHFIIQSLD-N-LYRLEGEGFPSIPLLIDHLLSTQQPLTKKSG-------VV   99 (377)
T ss_dssp             ---------------------------CCEEEC-----C-CCCC----CCSHHHHHHHHHHHTCCC------------CC
T ss_pred             ------------------------CCCccchhhcccc-c-eEEecceeccchHHHHHHHhhccCCcccccC-------cc
Confidence                                    1345566654432 2 3333456799999999999887654432111       11


Q ss_pred             CcccCCCCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC--CH---HHHHHHHHHHhcCCCCceeceee
Q psy17476        415 ATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM--SE---DDFIEEAKVMTRLQHQNLVQLYG  489 (513)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~--~~---~~f~~E~~il~~l~HpNIV~l~g  489 (513)
                      .......+.|++..++|.+.+.||+|+||.||+|.++.++..+++|....  ..   +.|.+|+++|++++|||||+++|
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  179 (377)
T 3cbl_A          100 LHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG  179 (377)
T ss_dssp             CCEECCCCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEE
T ss_pred             cccCccccccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence            12234567899999999999999999999999999986666666664322  22   35889999999999999999999


Q ss_pred             EEEeCCeeEEEEccCCCC
Q psy17476        490 VCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       490 ~~~~~~~~~lV~E~~~~G  507 (513)
                      +|...+++|||||||++|
T Consensus       180 ~~~~~~~~~lv~e~~~~g  197 (377)
T 3cbl_A          180 VCTQKQPIYIVMELVQGG  197 (377)
T ss_dssp             EECSSSSCEEEEECCTTC
T ss_pred             EEecCCCcEEEEEcCCCC
Confidence            999999999999999976

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.87  E-value=2.5e-23  Score=211.66  Aligned_cols=51  Identities=18%  Similarity=0.314  Sum_probs=45.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccC
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSL   57 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~   57 (513)
                      +++|+|.++++      .+++..++.+++|++.||+|||++|||||||||+|||++.
T Consensus       102 ~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~  152 (361)
T 4f9c_A          102 LEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR  152 (361)
T ss_dssp             CCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET
T ss_pred             CCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeC
Confidence            57899999984      2588899999999999999999999999999999966544

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.84  E-value=2.4e-22  Score=210.88  Aligned_cols=158  Identities=31%  Similarity=0.581  Sum_probs=124.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.++++++... .+++..+..++.||+.||+|||+++||||||||+|||++.++           ..|+      
T Consensus       269 ~~~g~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~-----------~~kl------  330 (450)
T 1k9a_A          269 MAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN-----------VAKV------  330 (450)
T ss_dssp             CTTCBHHHHHHHHCTT-TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTS-----------CEEE------
T ss_pred             cCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCC-----------CEEE------
Confidence            5789999999987543 368889999999999999999999999999999996665543           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                               
T Consensus       331 ------~DfG~a~~~~~---------------------------------------------------------------  341 (450)
T 1k9a_A          331 ------SDFGLTKEASS---------------------------------------------------------------  341 (450)
T ss_dssp             ------CCCTTCEECC----------------------------------------------------------------
T ss_pred             ------eeCCCcccccc---------------------------------------------------------------
Confidence                  88888751000                                                               


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......+                          .+.++|||++....|+.++|||||||++|||+|.|..||...+..+
T Consensus       342 -~~~~~~~--------------------------~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~  394 (450)
T 1k9a_A          342 -TQDTGKL--------------------------PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD  394 (450)
T ss_dssp             ------CC--------------------------CTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT
T ss_pred             -cccCCCC--------------------------CcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence             0000011                          2235667777778899999999999999999988999999998888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+.++.+++.|            .||..++..||++.+++.
T Consensus       395 ~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          395 VVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            88888888776655            589999999999998875

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.84  E-value=1.4e-22  Score=207.82  Aligned_cols=163  Identities=28%  Similarity=0.497  Sum_probs=124.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.++++++...  +++..+..++.|++.||+|||+++|+||||||+|||++.++           ..|+      
T Consensus       194 ~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~-----------~~kl------  254 (377)
T 3cbl_A          194 VQGGDFLTFLRTEGAR--LRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN-----------VLKI------  254 (377)
T ss_dssp             CTTCBHHHHHHHHGGG--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----------CEEE------
T ss_pred             CCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCC-----------cEEE------
Confidence            5789999999986543  58889999999999999999999999999999996665543           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..        .                                                     ...
T Consensus       255 ------~DfG~s~~~--------~-----------------------------------------------------~~~  267 (377)
T 3cbl_A          255 ------SDFGMSREE--------A-----------------------------------------------------DGV  267 (377)
T ss_dssp             ------CCGGGCEEC--------T-----------------------------------------------------TSE
T ss_pred             ------CcCCCceec--------C-----------------------------------------------------CCc
Confidence                  888887510        0                                                     000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      +.   ..+...                     .+.+.++|||++....|+.++|||||||++|||+|.|..||...+..+
T Consensus       268 ~~---~~~~~~---------------------~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~  323 (377)
T 3cbl_A          268 YA---ASGGLR---------------------QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ  323 (377)
T ss_dssp             EE---CCSSCC---------------------EEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH
T ss_pred             ee---ecCCCC---------------------CCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            00   000000                     012345778888888899999999999999999988999999998888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++.+++.|            .||..++..||++.+++..
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~  368 (377)
T 3cbl_A          324 TREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQE  368 (377)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            88888877776655            4899999999999988753

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.84  E-value=3.7e-22  Score=200.75  Aligned_cols=158  Identities=19%  Similarity=0.329  Sum_probs=118.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.+++.++.   .+++..++.++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        96 ~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~-----------~~kl------  155 (328)
T 3fe3_A           96 ASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM-----------NIKI------  155 (328)
T ss_dssp             CTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCC-----------CEEE------
Confidence            56899999998875   368999999999999999999999999999999996655543           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                 .+.            
T Consensus       156 ------~DFG~a~~~~-------------------------------------------------~~~------------  168 (328)
T 3fe3_A          156 ------ADFGFSNEFT-------------------------------------------------VGG------------  168 (328)
T ss_dssp             ------CSTTCCGGGS-------------------------------------------------SSC------------
T ss_pred             ------eeccCceecC-------------------------------------------------CCC------------
Confidence                  7888775100                                                 000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccc-cccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRF-SSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                       ......                          |++.++|||++....+ +.++||||+||++|||++ |..||...+..
T Consensus       169 -~~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~  220 (328)
T 3fe3_A          169 -KLDAFC--------------------------GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGQNLK  220 (328)
T ss_dssp             -GGGTTS--------------------------SSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHH-SSCSSCCSSHH
T ss_pred             -cccccc--------------------------CCcceeCcccccCCCcCCchhhhhhhHHHHHHHHh-CCCCCCCCCHH
Confidence             000112                          3444555666666665 478999999999999999 99999998888


Q ss_pred             eeccccccccccCCC-----------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP-----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p-----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++...+..+....+.           +||..++..|++++++|.+
T Consensus       221 ~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          221 ELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             HHHHHHHHCCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            887777655332221           4788999999999999986

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.84  E-value=6.5e-22  Score=199.67  Aligned_cols=159  Identities=19%  Similarity=0.254  Sum_probs=116.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||++||+||||||+|||++.++           ..++      
T Consensus        87 ~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-----------~vkL------  146 (337)
T 1o6l_A           87 ANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG-----------HIKI------  146 (337)
T ss_dssp             CTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCC-----------CEEE------
Confidence            47899999998865   368999999999999999999999999999999996665554           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                .+.            
T Consensus       147 ------~DFG~a~~~~~------------------------------------------------~~~------------  160 (337)
T 1o6l_A          147 ------TDFGLCKEGIS------------------------------------------------DGA------------  160 (337)
T ss_dssp             ------CCCTTCBCSCC------------------------------------------------TTC------------
T ss_pred             ------eeccchhhccc------------------------------------------------CCC------------
Confidence                  78888761000                                                000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......                          |++.+||||++....|+.++|+||+||++|||++ |..||...+..+
T Consensus       161 -~~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~  212 (337)
T 1o6l_A          161 -TMKTFC--------------------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHER  212 (337)
T ss_dssp             -CBCCCE--------------------------ECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -cccccc--------------------------cChhhCChhhhcCCCCCchhhcccchhHHHHHhc-CCCCCCCCCHHH
Confidence             000111                          3444556666666788999999999999999999 999998887777


Q ss_pred             ecccccccccc-CCC----------CCcCCCCCCHH-----HHHHHHcC
Q psy17476        241 VVDRVQRGIIL-EKP----------KAWYVGDMSRQ-----RAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~-~~p----------~~w~~~~~~R~-----~aeeLL~~  273 (513)
                      +...+..+... +..          .+|..++..|+     .+++++.+
T Consensus       213 ~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          213 LFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence            76666443221 111          46777888887     78888776

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.84  E-value=2.3e-22  Score=204.31  Aligned_cols=153  Identities=14%  Similarity=0.225  Sum_probs=110.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||++|||||||||+|||++.++           ..++      
T Consensus       106 ~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g-----------~ikL------  165 (353)
T 3txo_A          106 VNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG-----------HCKL------  165 (353)
T ss_dssp             CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCC-----------CEEE------
Confidence            57899999998875   368999999999999999999999999999999996665554           3355      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                .+             
T Consensus       166 ------~DFG~a~~~~~------------------------------------------------~~-------------  178 (353)
T 3txo_A          166 ------ADFGMCKEGIC------------------------------------------------NG-------------  178 (353)
T ss_dssp             ------CCCTTCBCSCC---------------------------------------------------------------
T ss_pred             ------ccccceeeccc------------------------------------------------CC-------------
Confidence                  88888761000                                                00             


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+..                          +||||++....|+.++|+||+||++|||++ |..||...+..+
T Consensus       179 ~~~~~~~gt~~--------------------------y~aPE~~~~~~~~~~~DiwslG~il~ell~-G~~Pf~~~~~~~  231 (353)
T 3txo_A          179 VTTATFCGTPD--------------------------YIAPEILQEMLYGPAVDWWAMGVLLYEMLC-GHAPFEAENEDD  231 (353)
T ss_dssp             -------CCGG--------------------------GCCHHHHHHHHCTTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             ccccccCCCcC--------------------------eEChhhcCCCCcCCccCCCcchHHHHHHHh-CCCCCCCCCHHH
Confidence            00011224444                          455566666678999999999999999999 999999988888


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHHHH
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQRA  267 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~~a  267 (513)
                      +...+..+....++           .++..++..|+.+
T Consensus       232 ~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~  269 (353)
T 3txo_A          232 LFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGS  269 (353)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHHhhhCHHHccCC
Confidence            88777655433222           2455555566655

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.84  E-value=1.3e-22  Score=213.07  Aligned_cols=163  Identities=29%  Similarity=0.536  Sum_probs=125.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.++|++.... .+++..+..++.||+.||+|||+++||||||||+|||++.++           ..|+      
T Consensus       264 ~~~g~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~-----------~~kl------  325 (454)
T 1qcf_A          264 MAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL-----------VCKI------  325 (454)
T ss_dssp             CTTCBHHHHHHSHHHH-TCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTC-----------CEEE------
T ss_pred             cCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCC-----------cEEE------
Confidence            5789999999875422 357889999999999999999999999999999996655443           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                                 
T Consensus       326 ------~DFG~a~~~-----------------------------------------------------------------  334 (454)
T 1qcf_A          326 ------ADFGLARVI-----------------------------------------------------------------  334 (454)
T ss_dssp             ------CSTTGGGGB-----------------------------------------------------------------
T ss_pred             ------eeCCCceEc-----------------------------------------------------------------
Confidence                  889887610                                                                 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                             ....+....              ...+.+.++|||++....|+.++|||||||++|||+|+|..||...+..+
T Consensus       335 -------~~~~~~~~~--------------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~  393 (454)
T 1qcf_A          335 -------EDNEYTARE--------------GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE  393 (454)
T ss_dssp             -------CCHHHHTTC--------------SSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred             -------CCCceeccC--------------CCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH
Confidence                   000000000              01123456778888888899999999999999999998999999998888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+++.|            +||..++..||++++++..
T Consensus       394 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~  438 (454)
T 1qcf_A          394 VIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSV  438 (454)
T ss_dssp             HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            88888877776655            5899999999999888653

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.84  E-value=1.5e-22  Score=203.28  Aligned_cols=163  Identities=27%  Similarity=0.527  Sum_probs=122.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.+++.++...  +++..+..++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        98 ~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~-----------~~kl------  158 (327)
T 3poz_A           98 MPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----------HVKI------  158 (327)
T ss_dssp             CTTCBHHHHHHHSTTS--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT-----------EEEE------
T ss_pred             cCCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCC-----------CEEE------
Confidence            5789999999986654  58889999999999999999999999999999996665543           3355      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                          ..... .
T Consensus       159 ------~Dfg~a~~~----------------------------------------------------------~~~~~-~  173 (327)
T 3poz_A          159 ------TDFGLAKLL----------------------------------------------------------GAEEK-E  173 (327)
T ss_dssp             ------CCTTHHHHH----------------------------------------------------------TTTCC--
T ss_pred             ------ccCcceeEc----------------------------------------------------------cCCcc-c
Confidence                  788887510                                                          00000 0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......                          +++.++|||++....++.++|||||||++|||++.|..||...+..+
T Consensus       174 ~~~~~~~--------------------------~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  227 (327)
T 3poz_A          174 YHAEGGK--------------------------VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE  227 (327)
T ss_dssp             ------C--------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             ccccCCC--------------------------ccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH
Confidence            0000011                          23345566667777889999999999999999988999999888888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+.+.+            .||..++..||++.+++..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          228 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            88777776655544            5899999999999998864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.84  E-value=8.1e-22  Score=200.22  Aligned_cols=159  Identities=16%  Similarity=0.260  Sum_probs=115.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||++|||||||||+|||++.++           ..++      
T Consensus       103 ~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g-----------~vkL------  162 (353)
T 2i0e_A          103 VNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG-----------HIKI------  162 (353)
T ss_dssp             CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCC-----------cEEE------
Confidence            47899999999865   368999999999999999999999999999999996665554           3355      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                .+          .  
T Consensus       163 ------~DFG~a~~~~~------------------------------------------------~~----------~--  176 (353)
T 2i0e_A          163 ------ADFGMCKENIW------------------------------------------------DG----------V--  176 (353)
T ss_dssp             ------CCCTTCBCCCC------------------------------------------------TT----------C--
T ss_pred             ------EeCCccccccc------------------------------------------------CC----------c--
Confidence                  88888761000                                                00          0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......                          |++.+||||++....|+.++|+||+||++|||++ |..||...+..+
T Consensus       177 -~~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-G~~Pf~~~~~~~  228 (353)
T 2i0e_A          177 -TTKTFC--------------------------GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDE  228 (353)
T ss_dssp             -CBCCCC--------------------------SCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -cccccc--------------------------CCccccChhhhcCCCcCCcccccchHHHHHHHHc-CCCCCCCCCHHH
Confidence             001112                          4455566777777789999999999999999999 999999888877


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHH-----HHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQ-----RAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~-----~aeeLL~~  273 (513)
                      +.+.+..+....++           .++..++..|+     .+++++.+
T Consensus       229 ~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          229 LFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            77777544322211           35666677776     45666665

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.84  E-value=7.4e-22  Score=201.87  Aligned_cols=165  Identities=25%  Similarity=0.444  Sum_probs=123.6

Q ss_pred             CCCCcHHHHHHhcCCC-------------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHENT-------------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~-------------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.+++.++...             ..+++..+..++.||+.||+|||+++||||||||+|||++.++        
T Consensus       169 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--------  240 (370)
T 2psq_A          169 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN--------  240 (370)
T ss_dssp             CTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC--------
T ss_pred             CCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCC--------
Confidence            4689999999986421             1368889999999999999999999999999999996665554        


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                         ..|+            .|||+++..                                                    
T Consensus       241 ---~~kl------------~DFG~a~~~----------------------------------------------------  253 (370)
T 2psq_A          241 ---VMKI------------ADFGLARDI----------------------------------------------------  253 (370)
T ss_dssp             ---CEEE------------CCCSSCEET----------------------------------------------------
T ss_pred             ---CEEE------------ccccCCccc----------------------------------------------------
Confidence               3355            888887510                                                    


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                                          ....+....             ....+++.+||||++....|+.++|||||||++|||++
T Consensus       254 --------------------~~~~~~~~~-------------~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt  300 (370)
T 2psq_A          254 --------------------NNIDYYKKT-------------TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT  300 (370)
T ss_dssp             --------------------TCCCTTCTT-------------TTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHT
T ss_pred             --------------------Ccccceecc-------------cCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHc
Confidence                                000000000             00112344567777777789999999999999999998


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .|..||...+..++...+..+.++..|            .||..++..||++.+++..
T Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          301 LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             TSCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            899999998888888887777665555            4899999999999998764

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.84  E-value=4.9e-22  Score=199.28  Aligned_cols=163  Identities=27%  Similarity=0.501  Sum_probs=121.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++..  .+++..+..++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        96 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~-----------~~kl------  156 (325)
T 3kex_A           96 LPLGSLLDHVRQHRG--ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPS-----------QVQV------  156 (325)
T ss_dssp             CTTCBSHHHHHSSGG--GSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSS-----------CEEE------
T ss_pred             CCCCCHHHHHHHccc--cCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCC-----------eEEE------
Confidence            578999999988644  358889999999999999999999999999999996655543           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-..                                                          .... .
T Consensus       157 ------~Dfg~a~~~~----------------------------------------------------------~~~~-~  171 (325)
T 3kex_A          157 ------ADFGVADLLP----------------------------------------------------------PDDK-Q  171 (325)
T ss_dssp             ------CSCSGGGGSC----------------------------------------------------------CCTT-C
T ss_pred             ------CCCCcccccC----------------------------------------------------------cccc-c
Confidence                  8888876100                                                          0000 0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+                          +.++|||++....++.++||||+||++|||++.|..||......+
T Consensus       172 ~~~~~~~~~--------------------------~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  225 (325)
T 3kex_A          172 LLYSEAKTP--------------------------IKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE  225 (325)
T ss_dssp             CC-----CC--------------------------TTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH
T ss_pred             ccccCCCCc--------------------------ccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH
Confidence            000001122                          334566666767889999999999999999988999999888888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+++.+            .||..++..||++.+++..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          226 VPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             HHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            88877776655544            5899999999999998875

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.83  E-value=8.2e-22  Score=200.81  Aligned_cols=162  Identities=18%  Similarity=0.274  Sum_probs=118.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.||+.||+|||++||+||||||+|||++.++..       ....++      
T Consensus        97 ~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~-------~~~vkl------  160 (361)
T 2yab_A           97 VSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIP-------IPHIKL------  160 (361)
T ss_dssp             CCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSS-------SCCEEE------
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCC-------ccCEEE------
Confidence            46899999998754   46899999999999999999999999999999999655443210       012344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.                                                          +....   
T Consensus       161 ------~DFG~a~~----------------------------------------------------------~~~~~---  173 (361)
T 2yab_A          161 ------IDFGLAHE----------------------------------------------------------IEDGV---  173 (361)
T ss_dssp             ------CCCSSCEE----------------------------------------------------------CCTTC---
T ss_pred             ------EecCCceE----------------------------------------------------------cCCCC---
Confidence                  78887750                                                          00000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ....                          ..|++.++|||++....|+.++|+||+||++|+|++ |..||...+..+
T Consensus       174 -~~~~--------------------------~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~Pf~~~~~~~  225 (361)
T 2yab_A          174 -EFKN--------------------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTKQE  225 (361)
T ss_dssp             -CCCC--------------------------CCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SCCSSCCSSHHH
T ss_pred             -cccc--------------------------CCCCccEECchHHcCCCCCccccHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence             0001                          124455566777777789999999999999999999 999999888777


Q ss_pred             eccccccccccCCC---------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP---------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p---------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.....+               .++..++..|+++.++|.+
T Consensus       226 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          226 TLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (361)
T ss_dssp             HHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            77776554322211               4678889999999999986

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.83  E-value=6.9e-22  Score=209.89  Aligned_cols=163  Identities=31%  Similarity=0.508  Sum_probs=125.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.++|++.... .+++..+..++.||+.||+|||+++||||||||+|||++.++           ..|+      
T Consensus       298 ~~~g~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~-----------~~kl------  359 (495)
T 1opk_A          298 MTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENH-----------LVKV------  359 (495)
T ss_dssp             CTTCBHHHHHHHSCTT-TSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG-----------CEEE------
T ss_pred             cCCCCHHHHHHhcCcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCC-----------cEEE------
Confidence            5789999999985433 468889999999999999999999999999999996655443           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                  .++            
T Consensus       360 ------~DFG~a~~~--------------------------------------------------~~~------------  371 (495)
T 1opk_A          360 ------ADFGLSRLM--------------------------------------------------TGD------------  371 (495)
T ss_dssp             ------CCTTCEECC--------------------------------------------------TTC------------
T ss_pred             ------eecccceec--------------------------------------------------cCC------------
Confidence                  888887610                                                  000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                                .+...              ....+.+.++|||++....|+.++|||||||++|||+++|..||...+..+
T Consensus       372 ----------~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~  427 (495)
T 1opk_A          372 ----------TYTAH--------------AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ  427 (495)
T ss_dssp             ----------CEECC--------------TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             ----------ceeec--------------CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH
Confidence                      00000              001122346677778888899999999999999999998999999988888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.+.+..+.+++.|            .||..++..||++.+++..
T Consensus       428 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~  472 (495)
T 1opk_A          428 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA  472 (495)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            88888777766555            5899999999999998764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.83  E-value=3.9e-22  Score=200.21  Aligned_cols=164  Identities=30%  Similarity=0.492  Sum_probs=122.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++++.....  +++..+..++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus       132 ~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-----------~~kl------  192 (325)
T 3kul_A          132 MENGSLDTFLRTHDGQ--FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNL-----------VCKV------  192 (325)
T ss_dssp             CTTCBHHHHHHTTTTC--SCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----------CEEE------
T ss_pred             CCCCcHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCC-----------CEEE------
Confidence            4689999999876543  58889999999999999999999999999999996655443           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                          .......
T Consensus       193 ------~Dfg~a~~~----------------------------------------------------------~~~~~~~  208 (325)
T 3kul_A          193 ------SDFGLSRVL----------------------------------------------------------EDDPDAA  208 (325)
T ss_dssp             ------CCCSSCEEC----------------------------------------------------------C----CC
T ss_pred             ------CCCCccccc----------------------------------------------------------ccCccce
Confidence                  788887510                                                          0000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ......                          .+++.++|||++....++.++|||||||++|||++.|..||......+
T Consensus       209 ~~~~~~--------------------------~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~  262 (325)
T 3kul_A          209 YTTTGG--------------------------KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD  262 (325)
T ss_dssp             EECC-----------------------------CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH
T ss_pred             eeccCC--------------------------CCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence            000000                          122345667777777889999999999999999988999999988888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+.+.+            .||..++..||++.+++..
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~  307 (325)
T 3kul_A          263 VISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSV  307 (325)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            88888777665554            4789999999999888764

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.83  E-value=8.8e-22  Score=194.99  Aligned_cols=158  Identities=18%  Similarity=0.325  Sum_probs=116.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.    .+++..+..++.|++.||+|||++||+||||||+|||++.++           ..++      
T Consensus        99 ~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~-----------~~kl------  157 (297)
T 3fxz_A           99 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-----------SVKL------  157 (297)
T ss_dssp             CTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-----------CEEE------
T ss_pred             CCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCC-----------CEEE------
Confidence            4689999999875    368889999999999999999999999999999996665554           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++..                                                          ......  
T Consensus       158 ------~Dfg~~~~----------------------------------------------------------~~~~~~--  171 (297)
T 3fxz_A          158 ------TDFGFCAQ----------------------------------------------------------ITPEQS--  171 (297)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCSTTC--
T ss_pred             ------eeCCCcee----------------------------------------------------------cCCccc--
Confidence                  78887650                                                          000000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ....                          ..|++.++|||++....|+.++||||+||++|||++ |..||...+..+
T Consensus       172 -~~~~--------------------------~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~  223 (297)
T 3fxz_A          172 -KRST--------------------------MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLR  223 (297)
T ss_dssp             -CBCC--------------------------CCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHH
T ss_pred             -ccCC--------------------------ccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence             0000                          124455566777777789999999999999999999 999998777655


Q ss_pred             eccccccccccCC--C------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK--P------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~--p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.....+..  +            .||..++..|+++.++|.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          224 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             HHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            5444432222111  1            5899999999999999976

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.83  E-value=3.8e-22  Score=209.48  Aligned_cols=163  Identities=33%  Similarity=0.511  Sum_probs=123.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.++|++.... .+++..+..++.||+.||+|||+++||||||||+|||++.++           ..|+      
T Consensus       260 ~~~gsL~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~-----------~~kl------  321 (452)
T 1fmk_A          260 MSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL-----------VCKV------  321 (452)
T ss_dssp             CTTCBHHHHHSHHHHT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-----------CEEE------
T ss_pred             hcCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCC-----------CEEE------
Confidence            5789999999874322 368889999999999999999999999999999996655443           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-..                                                          ..    
T Consensus       322 ------~DfG~a~~~~----------------------------------------------------------~~----  333 (452)
T 1fmk_A          322 ------ADFGLARLIE----------------------------------------------------------DN----  333 (452)
T ss_dssp             ------CCCCTTC-------------------------------------------------------------------
T ss_pred             ------CCCccceecC----------------------------------------------------------CC----
Confidence                  8888876100                                                          00    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                                .+...     .         ...+.+.++|||++....++.++|||||||++|||++.|..||......+
T Consensus       334 ----------~~~~~-----~---------~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~  389 (452)
T 1fmk_A          334 ----------EYTAR-----Q---------GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE  389 (452)
T ss_dssp             ---------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             ----------ceecc-----c---------CCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH
Confidence                      00000     0         00123345677777778899999999999999999998999999998888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++.+++.|            .||..++..||++++++..
T Consensus       390 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~  434 (452)
T 1fmk_A          390 VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF  434 (452)
T ss_dssp             HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            88888888776655            5899999999999988653

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.83  E-value=3.3e-22  Score=204.68  Aligned_cols=164  Identities=30%  Similarity=0.520  Sum_probs=117.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++++++...  +++..+..++.||+.||+|||+++|+||||||+|||++.++           ..|+      
T Consensus       128 ~~~~sL~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-----------~~kl------  188 (373)
T 2qol_A          128 MENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-----------VCKV------  188 (373)
T ss_dssp             CTTCBHHHHHHTTTTC--SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-----------CEEE------
T ss_pred             CCCCcHHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCC-----------CEEE------
Confidence            4689999999886543  58889999999999999999999999999999996655443           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-..                                                          ......
T Consensus       189 ------~Dfg~a~~~~----------------------------------------------------------~~~~~~  204 (373)
T 2qol_A          189 ------SDFGLGRVLE----------------------------------------------------------DDPEAA  204 (373)
T ss_dssp             ------CCC-----------------------------------------------------------------------
T ss_pred             ------CcCccccccc----------------------------------------------------------cCCccc
Confidence                  8888875100                                                          000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......                          +.+.++|||++....++.++|||||||++||+++.|..||...+..+
T Consensus       205 ~~~~~~~--------------------------~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~  258 (373)
T 2qol_A          205 YTTRGGK--------------------------IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD  258 (373)
T ss_dssp             -----------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH
T ss_pred             eeccCCC--------------------------cCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            0000000                          12235667777777899999999999999999987999999888888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+.+.+            .||..++..||++.+++..
T Consensus       259 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~  303 (373)
T 2qol_A          259 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI  303 (373)
T ss_dssp             HHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHH
Confidence            88888777666554            5899999999999988764

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.83  E-value=1.5e-21  Score=195.43  Aligned_cols=156  Identities=18%  Similarity=0.292  Sum_probs=112.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||++||+||||||+|||++.++           ..++      
T Consensus        88 ~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-----------~~kL------  147 (318)
T 1fot_A           88 IEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG-----------HIKI------  147 (318)
T ss_dssp             CCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCC-----------CEEE------
Confidence            46899999999865   368899999999999999999999999999999996665554           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.                                                          ...     
T Consensus       148 ------~Dfg~a~~----------------------------------------------------------~~~-----  158 (318)
T 1fot_A          148 ------TDFGFAKY----------------------------------------------------------VPD-----  158 (318)
T ss_dssp             ------CCCSSCEE----------------------------------------------------------CSS-----
T ss_pred             ------eecCccee----------------------------------------------------------cCC-----
Confidence                  78888750                                                          000     


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......                          |++.++|||++....|+.++|+||+||++|||++ |..||...+..+
T Consensus       159 -~~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~  210 (318)
T 1fot_A          159 -VTYTLC--------------------------GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA-GYTPFYDSNTMK  210 (318)
T ss_dssp             -CBCCCC--------------------------SCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHH-SSCTTCCSSHHH
T ss_pred             -cccccc--------------------------CCccccCHhHhcCCCCCcccchhhhHHHHHHHHh-CCCCCCCCCHHH
Confidence             000112                          3445566677777789999999999999999999 999998887777


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHH-----HHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQ-----RAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~-----~aeeLL~~  273 (513)
                      +...+..+....++           .++..++..|+     .+++++.+
T Consensus       211 ~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          211 TYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence            76666544322111           34555666665     56666654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.83  E-value=7.3e-22  Score=198.35  Aligned_cols=163  Identities=27%  Similarity=0.525  Sum_probs=121.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..++.++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        98 ~~~g~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~-----------~~kL------  158 (327)
T 3lzb_A           98 MPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----------HVKI------  158 (327)
T ss_dssp             CSSCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT-----------EEEE------
T ss_pred             cCCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCC-----------CEEE------
Confidence            5789999999987654  58889999999999999999999999999999997665554           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-..                                                          .... .
T Consensus       159 ------~DfG~a~~~~----------------------------------------------------------~~~~-~  173 (327)
T 3lzb_A          159 ------TDFGLAKLLG----------------------------------------------------------AEEK-E  173 (327)
T ss_dssp             ------CCTTC---------------------------------------------------------------------
T ss_pred             ------ccCcceeEcc----------------------------------------------------------Cccc-c
Confidence                  7888775100                                                          0000 0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ......                          .+++.+++||++....|+.++||||+||++|||++.|..||...+..+
T Consensus       174 ~~~~~~--------------------------~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~  227 (327)
T 3lzb_A          174 YHAEGG--------------------------KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE  227 (327)
T ss_dssp             --------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             ccccCC--------------------------CccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Confidence            000000                          123345667777777899999999999999999988999999988888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+.+.+            .||..++..||++.+++..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  272 (327)
T 3lzb_A          228 ISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            88877776665555            4799999999999998864

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=9.4e-22  Score=201.31  Aligned_cols=165  Identities=26%  Similarity=0.463  Sum_probs=118.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++++....  +++..+..++.||+.||+|||+++|+||||||+|||++.++           ..|+      
T Consensus       173 ~~~g~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-----------~~kL------  233 (373)
T 3c1x_A          173 MKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF-----------TVKV------  233 (373)
T ss_dssp             CTTCBHHHHHHCTTCC--CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-----------CEEE------
T ss_pred             CCCCCHHHHHhhcccC--CCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCC-----------CEEE------
Confidence            4689999999876543  58889999999999999999999999999999996655443           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...-                                                         ....  
T Consensus       234 ------~DFG~a~~~~~---------------------------------------------------------~~~~--  248 (373)
T 3c1x_A          234 ------ADFGLARDMYD---------------------------------------------------------KEFD--  248 (373)
T ss_dssp             ------CCC-----------------------------------------------------------------------
T ss_pred             ------eeccccccccc---------------------------------------------------------cccc--
Confidence                  88888761000                                                         0000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ...   ...                    ...+++.++|||++....++.++|||||||++|||++.|.+||...+..+
T Consensus       249 -~~~---~~~--------------------~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~  304 (373)
T 3c1x_A          249 -SVH---NKT--------------------GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD  304 (373)
T ss_dssp             ---------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC
T ss_pred             -ccc---ccC--------------------CCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH
Confidence             000   000                    00123345667777777899999999999999999997888998888777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++.++..|            .||..++..||++.+++..
T Consensus       305 ~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          305 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            77777766665544            5899999999999998764

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.83  E-value=1.4e-21  Score=200.87  Aligned_cols=161  Identities=16%  Similarity=0.234  Sum_probs=117.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.....  .+++..+..++.||+.||+|||+++|+||||||+|||++.++         ....++      
T Consensus       130 ~~gg~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~---------~~~vkL------  192 (387)
T 1kob_A          130 LSGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKK---------ASSVKI------  192 (387)
T ss_dssp             CCCCBHHHHTTCTTC--CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTT---------CCCEEE------
T ss_pred             CCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCC---------CCceEE------
Confidence            468999999987643  368999999999999999999999999999999996654321         123345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                 .....           
T Consensus       193 ------~DFG~a~~~-------------------------------------------------~~~~~-----------  206 (387)
T 1kob_A          193 ------IDFGLATKL-------------------------------------------------NPDEI-----------  206 (387)
T ss_dssp             ------CCCTTCEEC-------------------------------------------------CTTSC-----------
T ss_pred             ------Eecccceec-------------------------------------------------CCCcc-----------
Confidence                  788877500                                                 00000           


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        .....                          +++.++|||++....++.++||||+||++|||++ |..||...+..+
T Consensus       207 --~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~Pf~~~~~~~  257 (387)
T 1kob_A          207 --VKVTT--------------------------ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS-GLSPFAGEDDLE  257 (387)
T ss_dssp             --EEEEC--------------------------SSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH-SCCSSCCSSHHH
T ss_pred             --eeeec--------------------------cCCCccCchhccCCCCCCcccEeeHhHHHHHHHh-CCCCCCCCCHHH
Confidence              00011                          3445566677777788999999999999999999 999998877766


Q ss_pred             eccccccccccCC-------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK-------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~-------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+........       +        .||..++..|+++.++|.+
T Consensus       258 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          258 TLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             HHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            6666544321111       1        5788999999999999986

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.82  E-value=9.5e-22  Score=199.07  Aligned_cols=135  Identities=16%  Similarity=0.308  Sum_probs=102.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||++||+||||||+|||++.++           ..++      
T Consensus       100 ~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-----------~vkL------  159 (345)
T 1xjd_A          100 LNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG-----------HIKI------  159 (345)
T ss_dssp             CTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCC-----------CEEE------
Confidence            46899999999865   368999999999999999999999999999999996665554           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                 +         ..  
T Consensus       160 ------~DFG~a~~~~~-------------------------------------------------~---------~~--  173 (345)
T 1xjd_A          160 ------ADFGMCKENML-------------------------------------------------G---------DA--  173 (345)
T ss_dssp             ------CCCTTCBCCCC-------------------------------------------------T---------TC--
T ss_pred             ------eEChhhhhccc-------------------------------------------------C---------CC--
Confidence                  88888761000                                                 0         00  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......                          |++.++|||++....|+.++|+||+||++|||++ |..||...+..+
T Consensus       174 -~~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~  225 (345)
T 1xjd_A          174 -KTNTFC--------------------------GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI-GQSPFHGQDEEE  225 (345)
T ss_dssp             -CBCCCC--------------------------SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -cccCCC--------------------------CCcccCChhhhcCCCCCChhhhHHHHHHHHHHhc-CCCCCCCCCHHH
Confidence             001112                          4455566677777789999999999999999999 999999888877


Q ss_pred             ecccccccc
Q psy17476        241 VVDRVQRGI  249 (513)
Q Consensus       241 ~~~~i~~~~  249 (513)
                      +...+..+.
T Consensus       226 ~~~~i~~~~  234 (345)
T 1xjd_A          226 LFHSIRMDN  234 (345)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            777775543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.82  E-value=1.4e-21  Score=203.96  Aligned_cols=140  Identities=18%  Similarity=0.271  Sum_probs=101.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.++|.+....  +++..++.++.||+.||+|||+++||||||||+|||++.++           ..|+      
T Consensus       156 ~~gg~L~~~l~~~~~~--l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g-----------~vkL------  216 (437)
T 4aw2_A          156 YVGGDLLTLLSKFEDR--LPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG-----------HIRL------  216 (437)
T ss_dssp             CTTCBHHHHHHTTTTC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHHccCC--CCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCC-----------CEEE------
Confidence            5799999999985443  68999999999999999999999999999999996655544           4455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          ...  ..
T Consensus       217 ------~DFGla~~~----------------------------------------------------------~~~--~~  230 (437)
T 4aw2_A          217 ------ADFGSCLKL----------------------------------------------------------MED--GT  230 (437)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------CTT--SC
T ss_pred             ------cchhhhhhc----------------------------------------------------------ccC--CC
Confidence                  889887510                                                          000  00


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+.+|+|||++....                     -....|+.++||||+||++|||++ |..||...+..+
T Consensus       231 ~~~~~~~GT~~Y~APE~l~~~~---------------------~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~  288 (437)
T 4aw2_A          231 VQSSVAVGTPDYISPEILQAME---------------------GGKGRYGPECDWWSLGVCMYEMLY-GETPFYAESLVE  288 (437)
T ss_dssp             EECCSCCSCGGGCCHHHHHHHH---------------------TSCCEECTHHHHHHHHHHHHHHHH-SSCTTCCSSHHH
T ss_pred             cccccccCCcCeeChHHHhhcc---------------------cCCCCCCCcCeeHHHHHHHHHHHh-CCCCCCCCChhH
Confidence            0001123555665555442110                     013468999999999999999999 999999888877


Q ss_pred             ecccccc
Q psy17476        241 VVDRVQR  247 (513)
Q Consensus       241 ~~~~i~~  247 (513)
                      +...+..
T Consensus       289 ~~~~i~~  295 (437)
T 4aw2_A          289 TYGKIMN  295 (437)
T ss_dssp             HHHHHHT
T ss_pred             HHHhhhh
Confidence            7777743

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=1.5e-21  Score=195.53  Aligned_cols=161  Identities=15%  Similarity=0.220  Sum_probs=119.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.....  .+++..+..++.|++.||+|||++||+||||||+|||++.++         ....++      
T Consensus        83 ~~g~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~---------~~~~kl------  145 (321)
T 1tki_A           83 ISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRR---------SSTIKI------  145 (321)
T ss_dssp             CCCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS---------CCCEEE------
T ss_pred             CCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCC---------CCCEEE------
Confidence            468999999987543  368999999999999999999999999999999996555421         233455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.                                                 +..+...          
T Consensus       146 ------~Dfg~a~~-------------------------------------------------~~~~~~~----------  160 (321)
T 1tki_A          146 ------IEFGQARQ-------------------------------------------------LKPGDNF----------  160 (321)
T ss_dssp             ------CCCTTCEE-------------------------------------------------CCTTCEE----------
T ss_pred             ------EECCCCeE-------------------------------------------------CCCCCcc----------
Confidence                  78887750                                                 0000000          


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                         ....                          +++.++|||++....++.++||||+||++|||++ |..||...+..+
T Consensus       161 ---~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~  210 (321)
T 1tki_A          161 ---RLLF--------------------------TAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINPFLAETNQQ  210 (321)
T ss_dssp             ---EEEE--------------------------SCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHH-SSCTTCCSSHHH
T ss_pred             ---cccc--------------------------CChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHh-CCCCCcCCCHHH
Confidence               0011                          3344566677777778999999999999999999 999999888777


Q ss_pred             eccccccccccCC-------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK-------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~-------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.....       +        .|+..++..|+++.++|.+
T Consensus       211 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          211 IIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             HHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            7777654433221       1        5788999999999999986

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.82  E-value=2.1e-21  Score=196.91  Aligned_cols=156  Identities=18%  Similarity=0.214  Sum_probs=115.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||++||+||||||+|||++.++           ..++      
T Consensus       123 ~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-----------~~kL------  182 (350)
T 1rdq_E          123 VAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-----------YIQV------  182 (350)
T ss_dssp             CTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCC-----------CEEE------
Confidence            46899999999865   368999999999999999999999999999999996665554           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.                                                          ...  .  
T Consensus       183 ------~DFg~a~~----------------------------------------------------------~~~--~--  194 (350)
T 1rdq_E          183 ------TDFGFAKR----------------------------------------------------------VKG--R--  194 (350)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CSS--C--
T ss_pred             ------ccccccee----------------------------------------------------------ccC--C--
Confidence                  78888750                                                          000  0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        .....                          |++.++|||++....|+.++|+||+||++|||++ |..||...+..+
T Consensus       195 --~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~  245 (350)
T 1rdq_E          195 --TWTLC--------------------------GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQ  245 (350)
T ss_dssp             --BCCCE--------------------------ECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             --ccccc--------------------------CCccccCHHHhcCCCCCCcCCEecccHhHhHHhh-CCCCCCCCCHHH
Confidence              00011                          3445566777777789999999999999999999 999999888877


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHHH-----HHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQR-----AESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~~-----aeeLL~~  273 (513)
                      +...+..+....++           .+|..++..|+.     +++++.+
T Consensus       246 ~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          246 IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             HHHHHHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence            77777655332211           356667777766     6667665

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.82  E-value=1.2e-21  Score=213.26  Aligned_cols=164  Identities=27%  Similarity=0.452  Sum_probs=124.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.++|.+...  .+++..+..++.||+.||+|||+++||||||||+|||++.++           ..|+      
T Consensus       417 ~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~-----------~vkL------  477 (613)
T 2ozo_A          417 AGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRH-----------YAKI------  477 (613)
T ss_dssp             CTTCBHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-----------EEEE------
T ss_pred             CCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCC-----------cEEE------
Confidence            578999999987654  368899999999999999999999999999999996655443           3355      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-...                                                 ++.          .
T Consensus       478 ------~DFGla~~~~~-------------------------------------------------~~~----------~  492 (613)
T 2ozo_A          478 ------SDFGLSKALGA-------------------------------------------------DDS----------Y  492 (613)
T ss_dssp             ------CCCSTTTTCC----------------------------------------------------------------
T ss_pred             ------eeccCcccccC-------------------------------------------------CCc----------e
Confidence                  88888761000                                                 000          0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      +..    ...                     ..+.+.++|||++....|+.++|||||||++|||+++|..||...+..+
T Consensus       493 ~~~----~~~---------------------~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~  547 (613)
T 2ozo_A          493 YTA----RSA---------------------GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE  547 (613)
T ss_dssp             ----------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH
T ss_pred             eee----ccC---------------------CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Confidence            000    000                     0122345677777778899999999999999999988999999999989


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++.+++.|            .||..++..||++.+++..
T Consensus       548 ~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~  592 (613)
T 2ozo_A          548 VMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR  592 (613)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            99888888777655            5899999999999998653

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.82  E-value=2.4e-21  Score=200.20  Aligned_cols=163  Identities=15%  Similarity=0.263  Sum_probs=111.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.++|.+.... .+++..++.++.||+.||+|||+++||||||||+|||++.++        .....|+      
T Consensus       141 ~~gg~L~~~l~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--------~~~~~kl------  205 (400)
T 1nxk_A          141 LDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR--------PNAILKL------  205 (400)
T ss_dssp             CCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS--------TTCCEEE------
T ss_pred             CCCCcHHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCC--------CCccEEE------
Confidence            5789999999986533 479999999999999999999999999999999996555421        0233455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                          ...   
T Consensus       206 ------~DFG~a~~~~----------------------------------------------------------~~~---  218 (400)
T 1nxk_A          206 ------TDFGFAKETT----------------------------------------------------------SHN---  218 (400)
T ss_dssp             ------CCCTTCEECC----------------------------------------------------------------
T ss_pred             ------EecccccccC----------------------------------------------------------CCC---
Confidence                  8888875100                                                          000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|                          +|||++....|+.++|||||||++|||++ |..||.......
T Consensus       219 -~~~~~~gt~~y--------------------------~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~  270 (400)
T 1nxk_A          219 -SLTTPCYTPYY--------------------------VAPEVLGPEKYDKSCDMWSLGVIMYILLC-GYPPFYSNHGLA  270 (400)
T ss_dssp             ---------CTT--------------------------CCGGGSCCCCSSSHHHHHHHHHHHHHHHH-SSCSCCCCTTCS
T ss_pred             -ccccCCCCCCc--------------------------cCHhhcCCCCCCCcccHHHHHHHHHHHHh-CCCCCCCCcccc
Confidence             00111244444                          45555556688999999999999999999 999997665433


Q ss_pred             e----ccccccccc-cCC------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 V----VDRVQRGII-LEK------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~----~~~i~~~~~-~~~------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +    ...+..+.. .+.      +        .||..++..|+++.++|.+
T Consensus       271 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          271 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             SCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            2    233332221 111      1        5788999999999999876

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.82  E-value=3.3e-21  Score=201.95  Aligned_cols=159  Identities=20%  Similarity=0.246  Sum_probs=118.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh-cceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER-HNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~-~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      |++|+|.+++.+..   .+++..++.++.||+.||+|||+ +|||||||||+|||++.++           ..++     
T Consensus       230 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~-----------~~kl-----  290 (446)
T 4ejn_A          230 ANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG-----------HIKI-----  290 (446)
T ss_dssp             CSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSS-----------CEEE-----
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCC-----------CEEE-----
Confidence            57899999998865   46899999999999999999998 8999999999996655543           3455     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||+++....                                                .+.           
T Consensus       291 -------~DFG~a~~~~~------------------------------------------------~~~-----------  304 (446)
T 4ejn_A          291 -------TDFGLCKEGIK------------------------------------------------DGA-----------  304 (446)
T ss_dssp             -------CCCCCCCTTCC--------------------------------------------------------------
T ss_pred             -------ccCCCceeccC------------------------------------------------CCc-----------
Confidence                   88888761000                                                000           


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                        ......                          |++.+||||++....|+.++||||+||++|||++ |..||...+..
T Consensus       305 --~~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~  355 (446)
T 4ejn_A          305 --TMKTFC--------------------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHE  355 (446)
T ss_dssp             ----CCSS--------------------------SCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHH
T ss_pred             --cccccc--------------------------CCccccCHhhcCCCCCCCccchhhhHHHHHHHhh-CCCCCCCCCHH
Confidence              001112                          4445556666777789999999999999999999 99999988877


Q ss_pred             eeccccccccccCCC-----------CCcCCCCCCHH-----HHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP-----------KAWYVGDMSRQ-----RAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p-----------~~w~~~~~~R~-----~aeeLL~~  273 (513)
                      ++...+.......++           .||..++..|+     .++++|.+
T Consensus       356 ~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          356 KLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             HHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             HHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence            777666443222111           47888999998     89999876

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.82  E-value=1.1e-21  Score=214.17  Aligned_cols=162  Identities=28%  Similarity=0.491  Sum_probs=123.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.++|.++.   .+++..+..++.||+.||+|||+++||||||||+|||++.++           ..|+      
T Consensus       451 ~~~g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~-----------~~kL------  510 (635)
T 4fl3_A          451 AELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-----------YAKI------  510 (635)
T ss_dssp             CTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-----------EEEE------
T ss_pred             cCCCCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCC-----------CEEE------
Confidence            57899999998764   468899999999999999999999999999999996655543           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                 ..++.          .
T Consensus       511 ------~DFGla~~~-------------------------------------------------~~~~~----------~  525 (635)
T 4fl3_A          511 ------SDFGLSKAL-------------------------------------------------RADEN----------Y  525 (635)
T ss_dssp             ------CCTTHHHHT-------------------------------------------------TC--------------
T ss_pred             ------EEcCCcccc-------------------------------------------------ccCcc----------c
Confidence                  888887610                                                 00000          0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      +..    .+.                     ..+++.++|||++....|+.++|||||||++|||+++|..||...+..+
T Consensus       526 ~~~----~~~---------------------~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~  580 (635)
T 4fl3_A          526 YKA----QTH---------------------GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE  580 (635)
T ss_dssp             ----------------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             ccc----ccC---------------------CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            000    000                     0123445677778888899999999999999999988999999999988


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+..+.+++.|            .||..++..||++.+++.
T Consensus       581 ~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          581 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            88888888777665            489999999999998875

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.82  E-value=2.9e-21  Score=212.21  Aligned_cols=135  Identities=17%  Similarity=0.287  Sum_probs=103.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.++|.+..   .+++..++.|+.||+.||+|||+++||||||||+|||++.++           ..||      
T Consensus       424 ~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g-----------~ikL------  483 (674)
T 3pfq_A          424 VNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG-----------HIKI------  483 (674)
T ss_dssp             CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSS-----------CEEE------
T ss_pred             cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCC-----------cEEE------
Confidence            57899999999875   368999999999999999999999999999999996655554           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                          ....  
T Consensus       484 ------~DFGla~~~~----------------------------------------------------------~~~~--  497 (674)
T 3pfq_A          484 ------ADFGMCKENI----------------------------------------------------------WDGV--  497 (674)
T ss_dssp             ------CCCTTCEECC----------------------------------------------------------CTTC--
T ss_pred             ------eecceeeccc----------------------------------------------------------cCCc--
Confidence                  8899876100                                                          0000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......||                          +.+||||++....|+.++|+|||||++|||++ |..||...+..+
T Consensus       498 -~~~~~~GT--------------------------~~Y~APE~l~~~~~~~~~DvwSlGvilyellt-G~~Pf~~~~~~~  549 (674)
T 3pfq_A          498 -TTKTFCGT--------------------------PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDE  549 (674)
T ss_dssp             -CBCCCCSC--------------------------SSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -ccccccCC--------------------------CcccCHhhhcCCCCCccceEechHHHHHHHHc-CCCCCCCCCHHH
Confidence             00112234                          44455666677789999999999999999999 999999988888


Q ss_pred             ecccccccc
Q psy17476        241 VVDRVQRGI  249 (513)
Q Consensus       241 ~~~~i~~~~  249 (513)
                      +...|....
T Consensus       550 ~~~~i~~~~  558 (674)
T 3pfq_A          550 LFQSIMEHN  558 (674)
T ss_dssp             HHHHHHSSC
T ss_pred             HHHHHHhCC
Confidence            888776543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.82  E-value=4.4e-21  Score=200.64  Aligned_cols=162  Identities=17%  Similarity=0.195  Sum_probs=120.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.||+.||+|||++||+||||||+|||++.+.        .....|+      
T Consensus        92 ~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~--------~~~~vkL------  154 (444)
T 3soa_A           92 VTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKL--------KGAAVKL------  154 (444)
T ss_dssp             CBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSS--------TTCCEEE------
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccC--------CCCcEEE------
Confidence            46899999999865   368999999999999999999999999999999996655321        1223345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          ...... 
T Consensus       155 ------~DFG~a~~~----------------------------------------------------------~~~~~~-  169 (444)
T 3soa_A          155 ------ADFGLAIEV----------------------------------------------------------EGEQQA-  169 (444)
T ss_dssp             ------CCCSSCBCC----------------------------------------------------------CTTCCB-
T ss_pred             ------ccCceeEEe----------------------------------------------------------cCCCce-
Confidence                  788877510                                                          000000 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        ...                          ..|++.+||||++....|+.++||||+||++|+|++ |..||...+..+
T Consensus       170 --~~~--------------------------~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~-G~~Pf~~~~~~~  220 (444)
T 3soa_A          170 --WFG--------------------------FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV-GYPPFWDEDQHR  220 (444)
T ss_dssp             --CCC--------------------------SCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHH
T ss_pred             --eec--------------------------ccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHh-CCCCCCCccHHH
Confidence              001                          124455566777777789999999999999999999 999999888888


Q ss_pred             eccccccccccCCC---------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP---------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p---------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+......               .||..++..|+++.++|.+
T Consensus       221 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          221 LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             HHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            87777655332221               4688899999999999987

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.82  E-value=4.8e-21  Score=193.18  Aligned_cols=156  Identities=19%  Similarity=0.340  Sum_probs=115.4

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++.+..   .+++..++.++.|++.||+|||++||+||||||+|||++.++           ..++        
T Consensus        92 ~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~-----------~~kl--------  149 (336)
T 3h4j_B           92 GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNL-----------NVKI--------  149 (336)
T ss_dssp             CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTC-----------CEEE--------
T ss_pred             CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCC-----------CEEE--------
Confidence            689999998865   468999999999999999999999999999999996555443           3455        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++-.                                                 ..+.             .
T Consensus       150 ----~DFG~s~~~-------------------------------------------------~~~~-------------~  163 (336)
T 3h4j_B          150 ----ADFGLSNIM-------------------------------------------------TDGN-------------F  163 (336)
T ss_dssp             ----CCSSCTBTT-------------------------------------------------TTSB-------------T
T ss_pred             ----EEeccceec-------------------------------------------------cCCc-------------c
Confidence                788877510                                                 0000             0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccc-cccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRF-SSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      .....|+..|+|||.                          +....+ +.++||||+||++|+|++ |..||......++
T Consensus       164 ~~~~~gt~~y~aPE~--------------------------~~~~~~~~~~~DiwslG~il~~ll~-g~~Pf~~~~~~~~  216 (336)
T 3h4j_B          164 LKTSCGSPNYAAPEV--------------------------INGKLYAGPEVDVWSCGIVLYVMLV-GRLPFDDEFIPNL  216 (336)
T ss_dssp             TCCCTTSTTTSCGGG--------------------------SCCSGGGCHHHHHHHHHHHHHHHHH-SSCSSBCSSSTTC
T ss_pred             cccccCCcCcCCHHH--------------------------HcCCCCCCCccchhHHHHHHHHHHh-CCCCCCCccHHHH
Confidence            011235555555554                          444454 688999999999999999 9999998877777


Q ss_pred             ccccccccccCCC-----------CCcCCCCCCHHHHHHHHcC
Q psy17476        242 VDRVQRGIILEKP-----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       242 ~~~i~~~~~~~~p-----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ...+..+....++           .||..++..|+++++++.+
T Consensus       217 ~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          217 FKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             BCCCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             HHHHHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            7766554332222           5788999999999999876

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.82  E-value=2.2e-21  Score=188.63  Aligned_cols=162  Identities=36%  Similarity=0.618  Sum_probs=120.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        85 ~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~-----------~~~l------  145 (268)
T 3sxs_A           85 ISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDL-----------CVKV------  145 (268)
T ss_dssp             CTTCBHHHHHHHHGGG--CCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTC-----------CEEE------
T ss_pred             cCCCcHHHHHHHcCCC--CCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCC-----------CEEE------
Confidence            4689999999887543  58899999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                          .  ....
T Consensus       146 ------~Dfg~~~~~----------------------------------------------------------~--~~~~  159 (268)
T 3sxs_A          146 ------SDFGMTRYV----------------------------------------------------------L--DDQY  159 (268)
T ss_dssp             ------CCTTCEEEC----------------------------------------------------------C--TTCE
T ss_pred             ------ccCccceec----------------------------------------------------------c--hhhh
Confidence                  778776400                                                          0  0000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ......                          .+++.+++||++....++.++|+||+|+++|||++.|..||...+..+
T Consensus       160 ~~~~~~--------------------------~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  213 (268)
T 3sxs_A          160 VSSVGT--------------------------KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE  213 (268)
T ss_dssp             EECCSC--------------------------CCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             hcccCC--------------------------CcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH
Confidence            000001                          123345566667777889999999999999999987999999888877


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+..+.....|            .||..++..||++.+++..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          214 VVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             HHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            77777666555444            5899999999999998865

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.82  E-value=1.3e-21  Score=200.33  Aligned_cols=156  Identities=12%  Similarity=0.090  Sum_probs=108.8

Q ss_pred             CCcHHHHHHhcCCC----CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEe
Q psy17476          3 HGSLLNYLRRHENT----LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVAL   78 (513)
Q Consensus         3 ~g~L~~~l~~~~~~----~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~   78 (513)
                      +|+|.+++.+....    ..+++..+..++.||+.||+|||+++||||||||+|||++.++           ..|+    
T Consensus       183 ~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~-----------~~kL----  247 (377)
T 3byv_A          183 QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG-----------GVFL----  247 (377)
T ss_dssp             SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC-----------CEEE----
T ss_pred             CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-----------CEEE----
Confidence            68999999985321    1233578889999999999999999999999999996665543           3455    


Q ss_pred             ccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCc
Q psy17476         79 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE  158 (513)
Q Consensus        79 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  158 (513)
                              .|||+++.                                                   .+.          
T Consensus       248 --------~DFG~a~~---------------------------------------------------~~~----------  258 (377)
T 3byv_A          248 --------TGFEHLVR---------------------------------------------------DGA----------  258 (377)
T ss_dssp             --------CCGGGCEE---------------------------------------------------TTC----------
T ss_pred             --------Eechhhee---------------------------------------------------cCC----------
Confidence                    88888750                                                   000          


Q ss_pred             cceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccc-----------cccccCccccceeeeeeeee
Q psy17476        159 HWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYT-----------RFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       159 ~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----------~~~~~~Dvws~G~~l~el~t  227 (513)
                         ......| .+|+|                          ||++...           .|+.++|||||||++|||++
T Consensus       259 ---~~~~~~g-~~y~a--------------------------PE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ellt  308 (377)
T 3byv_A          259 ---RVVSSVS-RGFEP--------------------------PELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC  308 (377)
T ss_dssp             ---EEECCCC-TTCCC--------------------------HHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHH
T ss_pred             ---cccCCCC-cCccC--------------------------hhhhcccccccccccccccCChhhhHHHHHHHHHHHHH
Confidence               0011223 44444                          5555554           78999999999999999999


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC-------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP-------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p-------~~w~~~~~~R~~aeeLL~~  273 (513)
                       |..||...+..+....+........+       .||..++..|+++.++|.+
T Consensus       309 -g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  360 (377)
T 3byv_A          309 -ADLPITKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET  360 (377)
T ss_dssp             -SSCCC------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred             -CCCCCcccccccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence             99999887776666665443222111       5899999999999999875

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.81  E-value=1.2e-21  Score=192.09  Aligned_cols=162  Identities=29%  Similarity=0.523  Sum_probs=115.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.....  ++++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        97 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----------~~kl------  157 (281)
T 1mp8_A           97 CTLGELRSFLQVRKY--SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND-----------CVKL------  157 (281)
T ss_dssp             CTTEEHHHHHHHTTT--TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-----------EEEE------
T ss_pred             CCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCC-----------CEEE------
Confidence            467899999987654  368889999999999999999999999999999997666544           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-..                                                          ...  .
T Consensus       158 ------~Dfg~~~~~~----------------------------------------------------------~~~--~  171 (281)
T 1mp8_A          158 ------GDFGLSRYME----------------------------------------------------------DST--Y  171 (281)
T ss_dssp             ------CC------------------------------------------------------------------------
T ss_pred             ------CccccccccC----------------------------------------------------------ccc--c
Confidence                  7888765100                                                          000  0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......                          +++.++|||++....++.++|+||+||++|||++.|..||...+..+
T Consensus       172 ~~~~~~~--------------------------~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~  225 (281)
T 1mp8_A          172 YKASKGK--------------------------LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND  225 (281)
T ss_dssp             ---------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             cccccCC--------------------------CcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH
Confidence            0000001                          22345667777777889999999999999999976999999888888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+.+.+            .||..++..||++.+++..
T Consensus       226 ~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          226 VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            87777666555444            4788888889988887753

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.81  E-value=3e-21  Score=193.83  Aligned_cols=162  Identities=18%  Similarity=0.246  Sum_probs=117.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+|||++.++..       ....++      
T Consensus        96 ~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~-------~~~~kl------  159 (326)
T 2y0a_A           96 VAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVP-------KPRIKI------  159 (326)
T ss_dssp             CCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSS-------SCCEEE------
T ss_pred             CCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCC-------CCCEEE------
Confidence            46899999998754   46899999999999999999999999999999999665554310       112344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.                                                          .....   
T Consensus       160 ------~Dfg~a~~----------------------------------------------------------~~~~~---  172 (326)
T 2y0a_A          160 ------IDFGLAHK----------------------------------------------------------IDFGN---  172 (326)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCTTS---
T ss_pred             ------EECCCCeE----------------------------------------------------------CCCCC---
Confidence                  78887650                                                          00000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       .....                          .|++.++|||++....++.++||||+||++|||++ |..||...+..+
T Consensus       173 -~~~~~--------------------------~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~  224 (326)
T 2y0a_A          173 -EFKNI--------------------------FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTKQE  224 (326)
T ss_dssp             -CCCCC--------------------------CSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SCCSSCCSSHHH
T ss_pred             -ccccc--------------------------cCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHH-CcCCCCCCCHHH
Confidence             00011                          13445566777777788999999999999999999 999998877766


Q ss_pred             eccccccccccCC-------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK-------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~-------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+........       +        .||..++..|+++.++|.+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          225 TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             HHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            6655543322111       1        4788999999999999986

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.81  E-value=4.2e-21  Score=197.71  Aligned_cols=122  Identities=20%  Similarity=0.279  Sum_probs=93.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||+++||||||||+|||++.++           ..|+      
T Consensus       135 ~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g-----------~ikL------  194 (396)
T 4dc2_A          135 VNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG-----------HIKL------  194 (396)
T ss_dssp             CTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCC-----------CEEE------
Confidence            57899999999865   468999999999999999999999999999999996665554           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                ..+.            
T Consensus       195 ------~DFGla~~~~------------------------------------------------~~~~------------  208 (396)
T 4dc2_A          195 ------TDYGMCKEGL------------------------------------------------RPGD------------  208 (396)
T ss_dssp             ------CCCTTCBCCC------------------------------------------------CTTC------------
T ss_pred             ------eecceeeecc------------------------------------------------cCCC------------
Confidence                  8888876100                                                0000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCC
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRL  236 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~  236 (513)
                       ......                          |++.+||||++....|+.++|+||+||++|||++ |..||...
T Consensus       209 -~~~~~~--------------------------gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~-G~~Pf~~~  256 (396)
T 4dc2_A          209 -TTSTFC--------------------------GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA-GRSPFDIV  256 (396)
T ss_dssp             -CBCCCC--------------------------BCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSTTT
T ss_pred             -cccccc--------------------------CCcccCCchhhcCCCCChHHHHHHHHHHHHHHHh-CCCCCccc
Confidence             001112                          4455566777777789999999999999999999 99999643

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.81  E-value=3.7e-21  Score=196.11  Aligned_cols=161  Identities=19%  Similarity=0.232  Sum_probs=117.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.||+.||+|||+++|+||||||+|||++.++.        ....|+      
T Consensus       110 ~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~--------~~~~kl------  172 (362)
T 2bdw_A          110 VTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK--------GAAVKL------  172 (362)
T ss_dssp             CCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSST--------TCCEEE------
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCC--------CCCEEE------
Confidence            46899999998764   4689999999999999999999999999999999966554321        122344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          . .... 
T Consensus       173 ------~DfG~a~~~----------------------------------------------------------~-~~~~-  186 (362)
T 2bdw_A          173 ------ADFGLAIEV----------------------------------------------------------N-DSEA-  186 (362)
T ss_dssp             ------CCCTTCBCC----------------------------------------------------------T-TCCS-
T ss_pred             ------eecCcceEe----------------------------------------------------------c-CCcc-
Confidence                  788876510                                                          0 0000 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        ...                          ..|++.++|||++....|+.++||||+||++|||++ |..||...+..+
T Consensus       187 --~~~--------------------------~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~Pf~~~~~~~  237 (362)
T 2bdw_A          187 --WHG--------------------------FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV-GYPPFWDEDQHR  237 (362)
T ss_dssp             --CCC--------------------------SCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             --ccc--------------------------CCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHH-CCCCCCCCCHHH
Confidence              001                          124455566677777789999999999999999999 999998888777


Q ss_pred             eccccccccccCCC---------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP---------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p---------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+....+.               .||..++..|+++.++|.+
T Consensus       238 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          238 LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             HHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            77766554322111               4677888889988888876

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.81  E-value=3.6e-21  Score=199.37  Aligned_cols=142  Identities=15%  Similarity=0.221  Sum_probs=101.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.++|.+....  +++..++.++.||+.||+|||+++||||||||+|||++.++           ..|+      
T Consensus       143 ~~gg~L~~~l~~~~~~--l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g-----------~vkL------  203 (412)
T 2vd5_A          143 YVGGDLLTLLSKFGER--IPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCG-----------HIRL------  203 (412)
T ss_dssp             CCSCBHHHHHHHHSSC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCC-----------CEEE------
Confidence            5799999999986543  58899999999999999999999999999999996655544           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          ....  -
T Consensus       204 ------~DFGla~~~----------------------------------------------------------~~~~--~  217 (412)
T 2vd5_A          204 ------ADFGSCLKL----------------------------------------------------------RADG--T  217 (412)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------CTTS--C
T ss_pred             ------eechhheec----------------------------------------------------------cCCC--c
Confidence                  888887610                                                          0000  0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+..|+|||++.....                   ......|+.++|+|||||++|||++ |..||...+..+
T Consensus       218 ~~~~~~~Gt~~Y~APE~l~~~~~-------------------~~~~~~~~~~~DiwSlGvilyellt-G~~Pf~~~~~~~  277 (412)
T 2vd5_A          218 VRSLVAVGTPDYLSPEILQAVGG-------------------GPGTGSYGPECDWWALGVFAYEMFY-GQTPFYADSTAE  277 (412)
T ss_dssp             EECSSCCSCGGGCCHHHHHHHHT-------------------CTTCSEECTHHHHHHHHHHHHHHHH-SSCTTCCSSHHH
T ss_pred             cccceeccccCcCCHHHHhhccc-------------------CcCCCCCChHHhhhHHhHHHHHHHh-CCCCCCCCCHHH
Confidence            00011235556655554431100                   0003468999999999999999999 999999888777


Q ss_pred             ecccccc
Q psy17476        241 VVDRVQR  247 (513)
Q Consensus       241 ~~~~i~~  247 (513)
                      +...+.+
T Consensus       278 ~~~~i~~  284 (412)
T 2vd5_A          278 TYGKIVH  284 (412)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            7766654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.81  E-value=1.4e-21  Score=209.52  Aligned_cols=163  Identities=32%  Similarity=0.487  Sum_probs=125.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.++|++.... .+++..+..|+.||+.||+|||+++||||||||+|||++.++           ..||      
T Consensus       343 ~~~gsL~~~l~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~-----------~~kl------  404 (535)
T 2h8h_A          343 MSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL-----------VCKV------  404 (535)
T ss_dssp             CTTEEHHHHHSHHHHT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-----------CEEE------
T ss_pred             hcCCcHHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCC-----------cEEE------
Confidence            5789999999874322 368889999999999999999999999999999996655443           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                                 
T Consensus       405 ------~DFG~a~~~-----------------------------------------------------------------  413 (535)
T 2h8h_A          405 ------ADFGLARLI-----------------------------------------------------------------  413 (535)
T ss_dssp             ------CCTTSTTTC-----------------------------------------------------------------
T ss_pred             ------cccccceec-----------------------------------------------------------------
Confidence                  888887610                                                                 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                             ....+...              ....+...|+|||++....|+.++|||||||++|||++.|..||......+
T Consensus       414 -------~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~  472 (535)
T 2h8h_A          414 -------EDNEYTAR--------------QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE  472 (535)
T ss_dssp             -------CCHHHHTT--------------CSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH
T ss_pred             -------CCCceecc--------------cCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                   00000000              001123346778888888899999999999999999998999999998888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++.+++.+            .||..++..||++++++..
T Consensus       473 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~  517 (535)
T 2h8h_A          473 VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF  517 (535)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            88888888776655            5899999999999988653

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.81  E-value=1.3e-21  Score=199.70  Aligned_cols=168  Identities=26%  Similarity=0.390  Sum_probs=124.0

Q ss_pred             CCCCcHHHHHHhcCCC----CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEE
Q psy17476          1 MRHGSLLNYLRRHENT----LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVV   76 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~----~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~   76 (513)
                      +++|+|.+++.+....    ..+++..++.++.||+.||+|||++|||||||||+|||++.++.        ....++  
T Consensus       156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~--------~~~~kL--  225 (367)
T 3l9p_A          156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGP--------GRVAKI--  225 (367)
T ss_dssp             CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSST--------TCCEEE--
T ss_pred             CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCC--------CceEEE--
Confidence            4689999999986421    23688899999999999999999999999999999976664431        122344  


Q ss_pred             EeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecC
Q psy17476         77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT  156 (513)
Q Consensus        77 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  156 (513)
                                .|||+++..                                                          ...
T Consensus       226 ----------~DFG~a~~~----------------------------------------------------------~~~  237 (367)
T 3l9p_A          226 ----------GDFGMARDI----------------------------------------------------------YRA  237 (367)
T ss_dssp             ----------CCCHHHHHH----------------------------------------------------------HHH
T ss_pred             ----------CCCcccccc----------------------------------------------------------ccc
Confidence                      788877500                                                          000


Q ss_pred             CccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCC
Q psy17476        157 QEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRL  236 (513)
Q Consensus       157 ~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~  236 (513)
                      .. ........                          +++.++|||++....++.++|||||||++|||++.|..||...
T Consensus       238 ~~-~~~~~~~~--------------------------~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~  290 (367)
T 3l9p_A          238 GY-YRKGGCAM--------------------------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK  290 (367)
T ss_dssp             SS-CTTCCGGG--------------------------SCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             cc-cccCCCcC--------------------------CcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            00 00000011                          2344566777777789999999999999999998799999998


Q ss_pred             CcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        237 KNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       237 ~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +..++...+..+.+...+            .||..++..||++.+++..
T Consensus       291 ~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~  339 (367)
T 3l9p_A          291 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER  339 (367)
T ss_dssp             CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            888888888776655444            5899999999999998874

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.81  E-value=5.9e-21  Score=189.68  Aligned_cols=158  Identities=17%  Similarity=0.205  Sum_probs=114.0

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++.+.... ++++..++.++.|++.||+|||+++|+||||||+||+++.++           ..++        
T Consensus       102 ~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~-----------~~kl--------  161 (308)
T 3g33_A          102 DQDLRTYLDKAPPP-GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG-----------TVKL--------  161 (308)
T ss_dssp             CCBHHHHHHTCCTT-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTS-----------CEEE--------
T ss_pred             hcCHHHHHhhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC-----------CEEE--------
Confidence            57999999987643 479999999999999999999999999999999996665543           3345        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++-..                                                          ...    .
T Consensus       162 ----~Dfg~a~~~~----------------------------------------------------------~~~----~  175 (308)
T 3g33_A          162 ----ADFGLARIYS----------------------------------------------------------YQM----A  175 (308)
T ss_dssp             ----CSCSCTTTST----------------------------------------------------------TCC----C
T ss_pred             ----eeCccccccC----------------------------------------------------------CCc----c
Confidence                7888765100                                                          000    0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .....                          +++.++|||++....++.++||||+||++|||++ |..||...+..+..
T Consensus       176 ~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~  228 (308)
T 3g33_A          176 LTPVV--------------------------VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQL  228 (308)
T ss_dssp             SGGGG--------------------------CCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTT-SSCSCCCSSHHHHH
T ss_pred             cCCcc--------------------------ccccccCchHHcCCCCCchHHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Confidence            00011                          3344566677777788999999999999999999 99999887766555


Q ss_pred             cccccccccCCC--------------------------------------CCcCCCCCCHHHHHHHHcC
Q psy17476        243 DRVQRGIILEKP--------------------------------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       243 ~~i~~~~~~~~p--------------------------------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+.+....+.+                                      +|+..++..|+++.++|.+
T Consensus       229 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          229 GKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             HHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence            444322111110                                      3677888889999888876

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.81  E-value=3.4e-21  Score=197.10  Aligned_cols=134  Identities=18%  Similarity=0.223  Sum_probs=101.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||++|||||||||+|||++.++           ..++      
T Consensus       121 ~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g-----------~ikL------  180 (373)
T 2r5t_A          121 INGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG-----------HIVL------  180 (373)
T ss_dssp             CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCC-----------CEEE------
Confidence            57899999999865   358889999999999999999999999999999996665554           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                         ...   
T Consensus       181 ------~DFG~a~~~~~---------------------------------------------------------~~~---  194 (373)
T 2r5t_A          181 ------TDFGLCKENIE---------------------------------------------------------HNS---  194 (373)
T ss_dssp             ------CCCCBCGGGBC---------------------------------------------------------CCC---
T ss_pred             ------eeCcccccccc---------------------------------------------------------CCC---
Confidence                  88888761000                                                         000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|                          ++.++|||++....|+.++|+||+||++|||++ |..||...+..+
T Consensus       195 -~~~~~~g--------------------------t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-G~~Pf~~~~~~~  246 (373)
T 2r5t_A          195 -TTSTFCG--------------------------TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY-GLPPFYSRNTAE  246 (373)
T ss_dssp             -CCCSBSC--------------------------CCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCTTCCSBHHH
T ss_pred             -ccccccC--------------------------CccccCHHHhCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCHHH
Confidence             0011123                          344456666777789999999999999999999 999999888777


Q ss_pred             eccccccc
Q psy17476        241 VVDRVQRG  248 (513)
Q Consensus       241 ~~~~i~~~  248 (513)
                      +...+...
T Consensus       247 ~~~~i~~~  254 (373)
T 2r5t_A          247 MYDNILNK  254 (373)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHHhc
Confidence            77776544

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.81  E-value=6.5e-21  Score=192.99  Aligned_cols=121  Identities=20%  Similarity=0.276  Sum_probs=92.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        92 ~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-----------~~kL------  151 (345)
T 3a8x_A           92 VNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG-----------HIKL------  151 (345)
T ss_dssp             CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCC-----------CEEE------
Confidence            46899999998865   368999999999999999999999999999999996665554           3355      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                ..+.            
T Consensus       152 ------~DFG~a~~~~------------------------------------------------~~~~------------  165 (345)
T 3a8x_A          152 ------TDYGMCKEGL------------------------------------------------RPGD------------  165 (345)
T ss_dssp             ------CCGGGCBCSC------------------------------------------------CTTC------------
T ss_pred             ------Eecccccccc------------------------------------------------CCCC------------
Confidence                  8888876100                                                0000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCC
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGR  235 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~  235 (513)
                       ......                          |++.++|||++....|+.++|+||+||++|||++ |..||..
T Consensus       166 -~~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~  212 (345)
T 3a8x_A          166 -TTSTFC--------------------------GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA-GRSPFDI  212 (345)
T ss_dssp             -CBCCCC--------------------------SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCTTTT
T ss_pred             -cccccC--------------------------CCccccCccccCCCCCChHHhHHHHHHHHHHHHh-CCCCcCC
Confidence             001112                          4455566677777789999999999999999999 9999964

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.81  E-value=2.2e-21  Score=193.37  Aligned_cols=162  Identities=28%  Similarity=0.400  Sum_probs=114.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcc--eeccccCcccccccCccccccccCCccCCCceEEEe
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHN--YIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVAL   78 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~--iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~   78 (513)
                      +++|+|.+++.+......+++..+..++.|++.||+|||+++  |+||||||+||+++.++           ..++    
T Consensus       116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~-----------~~kL----  180 (309)
T 3p86_A          116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKY-----------TVKV----  180 (309)
T ss_dssp             CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTC-----------CEEE----
T ss_pred             CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCC-----------cEEE----
Confidence            468999999998653223688999999999999999999999  99999999996655543           3455    


Q ss_pred             ccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCc
Q psy17476         79 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE  158 (513)
Q Consensus        79 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  158 (513)
                              .|||+++-..-                                                          .  
T Consensus       181 --------~Dfg~a~~~~~----------------------------------------------------------~--  192 (309)
T 3p86_A          181 --------CDFGLSRLKAS----------------------------------------------------------T--  192 (309)
T ss_dssp             --------CCCC--------------------------------------------------------------------
T ss_pred             --------CCCCCCccccc----------------------------------------------------------c--
Confidence                    78887651000                                                          0  


Q ss_pred             cceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc
Q psy17476        159 HWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN  238 (513)
Q Consensus       159 ~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~  238 (513)
                       ........|                          ++.++|||++....++.++||||+||++|||++ |..||...+.
T Consensus       193 -~~~~~~~~g--------------------------t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~Pf~~~~~  244 (309)
T 3p86_A          193 -FLSSKSAAG--------------------------TPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT-LQQPWGNLNP  244 (309)
T ss_dssp             ------------------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHH-CCCTTTTSCH
T ss_pred             -ccccccCCC--------------------------CccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCH
Confidence             000001113                          344556666667788999999999999999999 9999998877


Q ss_pred             ceeccccc-cccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        239 TEVVDRVQ-RGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       239 ~~~~~~i~-~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .++...+. ...+...|            .||..++..||++.+++..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~  292 (309)
T 3p86_A          245 AQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDL  292 (309)
T ss_dssp             HHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            66665553 22333322            5899999999999988763

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.81  E-value=4.4e-21  Score=194.88  Aligned_cols=54  Identities=20%  Similarity=0.289  Sum_probs=48.5

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccC
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSL   57 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~   57 (513)
                      +|+|.+++.+.... ++++..++.++.||+.||+|||+++||||||||+|||++.
T Consensus       119 ~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  172 (360)
T 3llt_A          119 GPSLYEIITRNNYN-GFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD  172 (360)
T ss_dssp             CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESC
T ss_pred             CCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcc
Confidence            78999999987643 4788999999999999999999999999999999977664

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.81  E-value=7.2e-21  Score=195.28  Aligned_cols=165  Identities=24%  Similarity=0.420  Sum_probs=122.9

Q ss_pred             CCCCcHHHHHHhcCC-------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHEN-------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.+++.+...             ...+++..++.++.|++.||+|||+++|+||||||+|||++.++        
T Consensus       157 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--------  228 (382)
T 3tt0_A          157 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN--------  228 (382)
T ss_dssp             CTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC--------
T ss_pred             cCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCC--------
Confidence            468999999998652             11378999999999999999999999999999999996655543        


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                         ..++            .|||+++...                                                   
T Consensus       229 ---~~kL------------~DFG~a~~~~---------------------------------------------------  242 (382)
T 3tt0_A          229 ---VMKI------------ADFGLARDIH---------------------------------------------------  242 (382)
T ss_dssp             ---CEEE------------CSCSCCCCSS---------------------------------------------------
T ss_pred             ---cEEE------------cccCcccccc---------------------------------------------------
Confidence               3455            7888775100                                                   


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                             .. ..........                          +++.++|||++....++.++|||||||++|||++
T Consensus       243 -------~~-~~~~~~~~~~--------------------------~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt  288 (382)
T 3tt0_A          243 -------HI-DYYKKTTNGR--------------------------LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT  288 (382)
T ss_dssp             -------CC-CTTCCCTTCC--------------------------CGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHT
T ss_pred             -------cc-cccccccCCC--------------------------CCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHh
Confidence                   00 0000000011                          2334566777777788999999999999999998


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .|..||...+..++...+..+.+...+            .||..++..||++.+++..
T Consensus       289 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          289 LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             TSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            899999988888888877766555444            4799999999999998875

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.81  E-value=5.2e-21  Score=191.29  Aligned_cols=164  Identities=26%  Similarity=0.471  Sum_probs=117.1

Q ss_pred             CCCCcHHHHHHhcC---CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEE
Q psy17476          1 MRHGSLLNYLRRHE---NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVA   77 (513)
Q Consensus         1 ~~~g~L~~~l~~~~---~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~   77 (513)
                      +++|+|.+++....   ....+++..+..++.|++.||+|||+++|+||||||+|||++.++           ..++   
T Consensus       113 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~-----------~~kl---  178 (323)
T 3qup_A          113 MKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM-----------TVCV---  178 (323)
T ss_dssp             CTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS-----------CEEE---
T ss_pred             ccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCC-----------CEEE---
Confidence            46899999998743   222478899999999999999999999999999999996665543           3345   


Q ss_pred             eccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCC
Q psy17476         78 LYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ  157 (513)
Q Consensus        78 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  157 (513)
                               .|||+++...                                                 .+..        
T Consensus       179 ---------~Dfg~a~~~~-------------------------------------------------~~~~--------  192 (323)
T 3qup_A          179 ---------ADFGLSRKIY-------------------------------------------------SGDY--------  192 (323)
T ss_dssp             ---------CCCCC------------------------------------------------------------------
T ss_pred             ---------eecccccccc-------------------------------------------------cccc--------
Confidence                     7888775100                                                 0000        


Q ss_pred             ccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC
Q psy17476        158 EHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK  237 (513)
Q Consensus       158 ~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~  237 (513)
                         .  .  .+..                     ..+.+.++|||++....++.++||||+||++|||++.|..||...+
T Consensus       193 ---~--~--~~~~---------------------~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~  244 (323)
T 3qup_A          193 ---Y--R--QGCA---------------------SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE  244 (323)
T ss_dssp             ------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             ---c--c--cccc---------------------ccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC
Confidence               0  0  0000                     0122345667777777899999999999999999998899999888


Q ss_pred             cceeccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        238 NTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       238 ~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      ..++...+..+.+.+.+            .||..++..||++.+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  291 (323)
T 3qup_A          245 NAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRM  291 (323)
T ss_dssp             GGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             hHHHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            88887777665544443            588999999999666654

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.81  E-value=7.3e-21  Score=190.52  Aligned_cols=158  Identities=20%  Similarity=0.347  Sum_probs=116.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.    .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       124 ~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-----------~~kl------  182 (321)
T 2c30_A          124 LQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG-----------RVKL------  182 (321)
T ss_dssp             CCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-----------CEEE------
T ss_pred             CCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC-----------cEEE------
Confidence            4689999998754    368999999999999999999999999999999996665543           3355      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.                                                          ......  
T Consensus       183 ------~Dfg~~~~----------------------------------------------------------~~~~~~--  196 (321)
T 2c30_A          183 ------SDFGFCAQ----------------------------------------------------------ISKDVP--  196 (321)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCSSSC--
T ss_pred             ------eeeeeeee----------------------------------------------------------cccCcc--
Confidence                  78887650                                                          000000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       .....                          .|++.++|||++....++.++|||||||++|||++ |..||...+..+
T Consensus       197 -~~~~~--------------------------~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~  248 (321)
T 2c30_A          197 -KRKSL--------------------------VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD-GEPPYFSDSPVQ  248 (321)
T ss_dssp             -CBCCC--------------------------CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHH
T ss_pred             -ccccc--------------------------cCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence             00011                          13445566666777788999999999999999999 999998877666


Q ss_pred             eccccccccccCC------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.....+..      +        .||..++..|+++.++|.+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          249 AMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             HHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            6555543322211      1        5788999999999999976

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.81  E-value=5.1e-21  Score=192.19  Aligned_cols=159  Identities=18%  Similarity=0.197  Sum_probs=114.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||++||+||||||+|||++.++           ..++      
T Consensus       103 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~-----------~~kl------  162 (327)
T 3a62_A          103 LSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG-----------HVKL------  162 (327)
T ss_dssp             CTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCC-----------cEEE------
Confidence            46899999998865   368889999999999999999999999999999996665544           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                          ...  
T Consensus       163 ------~Dfg~~~~~~~----------------------------------------------------------~~~--  176 (327)
T 3a62_A          163 ------TDFGLCKESIH----------------------------------------------------------DGT--  176 (327)
T ss_dssp             ------CCCSCC--------------------------------------------------------------------
T ss_pred             ------EeCCccccccc----------------------------------------------------------CCc--
Confidence                  78887751000                                                          000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       .....                          .|++.++|||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       177 -~~~~~--------------------------~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~  228 (327)
T 3a62_A          177 -VTHTF--------------------------CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLT-GAPPFTGENRKK  228 (327)
T ss_dssp             ---CTT--------------------------SSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHH
T ss_pred             -ccccc--------------------------CCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHH-CCCCCCCCCHHH
Confidence             00011                          23445566677777788999999999999999999 999999887777


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHH-----HHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQ-----RAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~-----~aeeLL~~  273 (513)
                      +...+.++....++           +||..++..|+     .+++++.+
T Consensus       229 ~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          229 TIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             HHHHHHHTCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence            76666543222211           46777777787     67777775

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.81  E-value=6.2e-21  Score=197.44  Aligned_cols=134  Identities=18%  Similarity=0.288  Sum_probs=99.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.+++++.    .+++..++.++.||+.||+|||++|||||||||+|||++.++           ..|+      
T Consensus       151 ~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g-----------~ikL------  209 (410)
T 3v8s_A          151 MPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG-----------HLKL------  209 (410)
T ss_dssp             CTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCC-----------CEEE------
Confidence            5799999999864    368899999999999999999999999999999996655544           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          .  ....
T Consensus       210 ------~DFG~a~~~----------------------------------------------------------~--~~~~  223 (410)
T 3v8s_A          210 ------ADFGTCMKM----------------------------------------------------------N--KEGM  223 (410)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------C--TTSE
T ss_pred             ------eccceeEee----------------------------------------------------------c--cCCc
Confidence                  888887510                                                          0  0000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccccc----ccccCccccceeeeeeeeecCCCCCCCC
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTR----FSSKSDVWAYGVLMWEVFTCGKMPYGRL  236 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~~~~~Dvws~G~~l~el~t~g~~pf~~~  236 (513)
                      .......|+.+|+|||                          ++....    |+.++|+||+||++|||++ |..||...
T Consensus       224 ~~~~~~~gt~~Y~APE--------------------------~l~~~~~~~~~~~~~DiwSlGvilyell~-G~~Pf~~~  276 (410)
T 3v8s_A          224 VRCDTAVGTPDYISPE--------------------------VLKSQGGDGYYGRECDWWSVGVFLYEMLV-GDTPFYAD  276 (410)
T ss_dssp             EECCSCCSCGGGCCHH--------------------------HHHTTTTTCEEETHHHHHHHHHHHHHHHH-SSCTTCCS
T ss_pred             ccccCCcCCccccCHH--------------------------HhhccCCCcCCCCcceEecchHHHHHHHh-CCCCCCCC
Confidence            0011223555555554                          444433    7899999999999999999 99999988


Q ss_pred             Ccceeccccccc
Q psy17476        237 KNTEVVDRVQRG  248 (513)
Q Consensus       237 ~~~~~~~~i~~~  248 (513)
                      +..++...+.++
T Consensus       277 ~~~~~~~~i~~~  288 (410)
T 3v8s_A          277 SLVGTYSKIMNH  288 (410)
T ss_dssp             SHHHHHHHHHTH
T ss_pred             ChhhHHHHHHhc
Confidence            887777777543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.81  E-value=4.3e-21  Score=186.72  Aligned_cols=162  Identities=38%  Similarity=0.617  Sum_probs=121.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++......  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        87 ~~~~~L~~~l~~~~~~--~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~-----------~~kl------  147 (269)
T 4hcu_A           87 MEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ-----------VIKV------  147 (269)
T ss_dssp             CTTCBHHHHHHTTTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGG-----------CEEE------
T ss_pred             CCCCcHHHHHHhcCcc--cCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCC-----------CEEe------
Confidence            4689999999876543  58889999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                                 
T Consensus       148 ------~Dfg~~~~~-----------------------------------------------------------------  156 (269)
T 4hcu_A          148 ------SDFGMTRFV-----------------------------------------------------------------  156 (269)
T ss_dssp             ------CCTTGGGGB-----------------------------------------------------------------
T ss_pred             ------ccccccccc-----------------------------------------------------------------
Confidence                  788876510                                                                 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                             ........              ....+++.++|||++....++.++|+||+||++|||++.|..||...+..+
T Consensus       157 -------~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~  215 (269)
T 4hcu_A          157 -------LDDQYTSS--------------TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE  215 (269)
T ss_dssp             -------CCHHHHST--------------TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             -------cccccccc--------------cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH
Confidence                   00000000              001123345667777777889999999999999999987899999888888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+...|            .||..++..||++.+++..
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          216 VVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            87777766555444            4788999999999988764

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=3.7e-21  Score=193.63  Aligned_cols=164  Identities=30%  Similarity=0.511  Sum_probs=119.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       128 ~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~-----------~~kl------  188 (333)
T 1mqb_A          128 MENGALDKFLREKDGE--FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL-----------VCKV------  188 (333)
T ss_dssp             CTTEEHHHHHHHTTTC--SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-----------CEEE------
T ss_pred             CCCCcHHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCC-----------cEEE------
Confidence            4688999999886543  58889999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-..                                                          ......
T Consensus       189 ------~Dfg~~~~~~----------------------------------------------------------~~~~~~  204 (333)
T 1mqb_A          189 ------SDFGLSRVLE----------------------------------------------------------DDPEAT  204 (333)
T ss_dssp             ------CCCCC---------------------------------------------------------------------
T ss_pred             ------CCCCcchhhc----------------------------------------------------------cccccc
Confidence                  7888765100                                                          000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ......                          .+++.++|||++....++.++|||||||++|||+++|..||...+..+
T Consensus       205 ~~~~~~--------------------------~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~  258 (333)
T 1mqb_A          205 YTTSGG--------------------------KIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE  258 (333)
T ss_dssp             --------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             cccCCC--------------------------CccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH
Confidence            000000                          123345667777777889999999999999999988999999888888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+++.+            .||..++..||++.+++..
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          259 VMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             HHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            88877776665544            4799999999999888764

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.81  E-value=5.7e-21  Score=196.35  Aligned_cols=58  Identities=26%  Similarity=0.289  Sum_probs=50.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      |++|+|.+++...... ++++..++.++.||+.||+|||+++||||||||+|||++.++
T Consensus       108 ~~~~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~  165 (389)
T 3gni_B          108 MAYGSAKDLICTHFMD-GMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG  165 (389)
T ss_dssp             CTTCBHHHHHHHTCTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             cCCCCHHHHHhhhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            5789999999986433 478999999999999999999999999999999996665554

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=2.9e-21  Score=189.95  Aligned_cols=164  Identities=26%  Similarity=0.436  Sum_probs=120.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+...  .+++..+..++.|++.||.|||+++|+||||||+||+++.++           ..++      
T Consensus        91 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~-----------~~kl------  151 (287)
T 1u59_A           91 AGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH-----------YAKI------  151 (287)
T ss_dssp             CTTEEHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETT-----------EEEE------
T ss_pred             CCCCCHHHHHHhCCc--cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCC-----------CEEE------
Confidence            468899999987544  368899999999999999999999999999999997665543           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          .......
T Consensus       152 ------~Dfg~~~~~----------------------------------------------------------~~~~~~~  167 (287)
T 1u59_A          152 ------SDFGLSKAL----------------------------------------------------------GADDSYY  167 (287)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------TTCSCEE
T ss_pred             ------Ccccceeee----------------------------------------------------------ccCccee
Confidence                  777776500                                                          0000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .....                          ..+++.+++||++....++.++|+||+||++|||+++|..||...+..+
T Consensus       168 ~~~~~--------------------------~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  221 (287)
T 1u59_A          168 TARSA--------------------------GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE  221 (287)
T ss_dssp             CCCCS--------------------------SCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH
T ss_pred             ecccc--------------------------ccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence            00000                          1123445666777777889999999999999999987999999888888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+++.|            .||..++..||++.+++..
T Consensus       222 ~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  266 (287)
T 1u59_A          222 VMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR  266 (287)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            87777776655444            5899999999999998764

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.80  E-value=5.6e-21  Score=185.51  Aligned_cols=156  Identities=18%  Similarity=0.307  Sum_probs=109.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcc--eeccccCcccccccCccccccccCCccCCCceEEEe
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHN--YIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVAL   78 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~--iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~   78 (513)
                      +++|+|.+++.+.... ++++..+..++.|++.||+|||+++  |+||||||+||+++.++.           .++  .+
T Consensus        91 ~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~-----------~~l--~~  156 (271)
T 3kmu_A           91 MPYGSLYNVLHEGTNF-VVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMT-----------ARI--SM  156 (271)
T ss_dssp             CTTCBHHHHHHSCSSC-CCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSC-----------EEE--EG
T ss_pred             cCCCcHHHHHhhcccC-CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcc-----------eeE--Ee
Confidence            4689999999986543 4789999999999999999999999  999999999976665542           222  22


Q ss_pred             ccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCc
Q psy17476         79 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE  158 (513)
Q Consensus        79 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  158 (513)
                      +|        |+.+..                                                                
T Consensus       157 ~~--------~~~~~~----------------------------------------------------------------  164 (271)
T 3kmu_A          157 AD--------VKFSFQ----------------------------------------------------------------  164 (271)
T ss_dssp             GG--------SCCTTS----------------------------------------------------------------
T ss_pred             cc--------ceeeec----------------------------------------------------------------
Confidence            22        221110                                                                


Q ss_pred             cceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccc---cccCccccceeeeeeeeecCCCCCCC
Q psy17476        159 HWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRF---SSKSDVWAYGVLMWEVFTCGKMPYGR  235 (513)
Q Consensus       159 ~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~Dvws~G~~l~el~t~g~~pf~~  235 (513)
                          .....|+..|+|||.                          +....+   +.++||||+||++|||++ |..||..
T Consensus       165 ----~~~~~~t~~y~aPE~--------------------------~~~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~  213 (271)
T 3kmu_A          165 ----SPGRMYAPAWVAPEA--------------------------LQKKPEDTNRRSADMWSFAVLLWELVT-REVPFAD  213 (271)
T ss_dssp             ----CTTCBSCGGGSCHHH--------------------------HHSCGGGSCHHHHHHHHHHHHHHHHHH-CSCTTTT
T ss_pred             ----ccCccCCccccChhh--------------------------hccCCCCCCCchhhHHHHHHHHHHHHh-CCCCccc
Confidence                000114455555554                          443333   447999999999999999 9999988


Q ss_pred             CCcceeccccc-cccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        236 LKNTEVVDRVQ-RGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       236 ~~~~~~~~~i~-~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+..++...+. .+.++..|            .||..++..||++.+++..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  264 (271)
T 3kmu_A          214 LSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPI  264 (271)
T ss_dssp             SCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            87766654443 33333333            4788888999988888753

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.80  E-value=1.1e-20  Score=188.88  Aligned_cols=162  Identities=18%  Similarity=0.277  Sum_probs=117.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+||+++.++..       ....++      
T Consensus        97 ~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~-------~~~~kl------  160 (321)
T 2a2a_A           97 VSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIP-------IPHIKL------  160 (321)
T ss_dssp             CCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSS-------SCCEEE------
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCC-------cCCEEE------
Confidence            46899999998754   46899999999999999999999999999999999666554310       002344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.                                                          .....   
T Consensus       161 ------~Dfg~~~~----------------------------------------------------------~~~~~---  173 (321)
T 2a2a_A          161 ------IDFGLAHE----------------------------------------------------------IEDGV---  173 (321)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCTTC---
T ss_pred             ------ccCcccee----------------------------------------------------------cCccc---
Confidence                  77877650                                                          00000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ....                          ..+++.++|||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       174 -~~~~--------------------------~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~  225 (321)
T 2a2a_A          174 -EFKN--------------------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTKQE  225 (321)
T ss_dssp             -CCCC--------------------------CCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SCCSSCCSSHHH
T ss_pred             -cccc--------------------------cCCCCCccCcccccCCCCCCccccHHHHHHHHHHHH-CCCCCCCCCHHH
Confidence             0000                          124455566777777788999999999999999999 999998877766


Q ss_pred             eccccccccccCC-------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK-------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~-------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+........       +        .||..++..|+++.++|.+
T Consensus       226 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          226 TLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             HHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            6665544322111       1        5899999999999999986

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.80  E-value=7.3e-21  Score=187.89  Aligned_cols=165  Identities=27%  Similarity=0.473  Sum_probs=118.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++++....  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       109 ~~~~~L~~~l~~~~~~--~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~-----------~~kl------  169 (298)
T 3f66_A          109 MKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF-----------TVKV------  169 (298)
T ss_dssp             CTTCBHHHHHHCTTCC--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC-----------CEEE------
T ss_pred             CCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCC-----------CEEE------
Confidence            4688999999875543  58889999999999999999999999999999996665543           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                                
T Consensus       170 ------~Dfg~a~~~~----------------------------------------------------------------  179 (298)
T 3f66_A          170 ------ADFGLARDMY----------------------------------------------------------------  179 (298)
T ss_dssp             ------CSCGGGCCCS----------------------------------------------------------------
T ss_pred             ------Cccccccccc----------------------------------------------------------------
Confidence                  7888775100                                                                


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                              ........  .         .....+++.+++||++....++.++|+||+||++|||++.+.+||...+..+
T Consensus       180 --------~~~~~~~~--~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~  240 (298)
T 3f66_A          180 --------DKEYYSVH--N---------KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD  240 (298)
T ss_dssp             --------CGGGCBC----------------CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT
T ss_pred             --------ccchhccc--c---------ccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH
Confidence                    00000000  0         0001133445667777777889999999999999999997778888777777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+...|            .||..++..||++.+++..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  285 (298)
T 3f66_A          241 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  285 (298)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            77666665554443            4788899999999888764

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.80  E-value=3.5e-21  Score=188.61  Aligned_cols=162  Identities=31%  Similarity=0.526  Sum_probs=119.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++...  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        94 ~~~~~L~~~l~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----------~~kl------  154 (281)
T 3cc6_A           94 YPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE-----------CVKL------  154 (281)
T ss_dssp             CTTCBHHHHHHHHTTT--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETT-----------EEEE------
T ss_pred             CCCCCHHHHHHhcccc--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCC-----------cEEe------
Confidence            4689999999887543  58889999999999999999999999999999997666554           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...-                                                            ...
T Consensus       155 ------~Dfg~~~~~~~------------------------------------------------------------~~~  168 (281)
T 3cc6_A          155 ------GDFGLSRYIED------------------------------------------------------------EDY  168 (281)
T ss_dssp             ------CCCCGGGCC-----------------------------------------------------------------
T ss_pred             ------CccCCCccccc------------------------------------------------------------ccc
Confidence                  78887651000                                                            000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......+                          ++.++|||++....++.++|+|||||++|||++.|..||......+
T Consensus       169 ~~~~~~~~--------------------------~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~  222 (281)
T 3cc6_A          169 YKASVTRL--------------------------PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD  222 (281)
T ss_dssp             ----CCCC--------------------------CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG
T ss_pred             cccccCCC--------------------------CcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH
Confidence            00000112                          2344566666667889999999999999999977999998888777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+++.+            .||..++..||++.+++..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          223 VIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            77777666555444            4788889999999888754

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=8.9e-21  Score=187.00  Aligned_cols=165  Identities=26%  Similarity=0.468  Sum_probs=119.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++......  +++..+..++.|++.||+|||++||+||||||+||+++.++           ..++      
T Consensus       105 ~~~~~L~~~~~~~~~~--~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~-----------~~kl------  165 (298)
T 3pls_A          105 MCHGDLLQFIRSPQRN--PTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESF-----------TVKV------  165 (298)
T ss_dssp             CTTCBHHHHHHCTTCC--CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC-----------CEEE------
T ss_pred             ccCCCHHHHHhccccC--CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC-----------cEEe------
Confidence            4689999999885543  58889999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                                 
T Consensus       166 ------~Dfg~~~~~-----------------------------------------------------------------  174 (298)
T 3pls_A          166 ------ADFGLARDI-----------------------------------------------------------------  174 (298)
T ss_dssp             ------CCTTSSCTT-----------------------------------------------------------------
T ss_pred             ------CcCCCcccc-----------------------------------------------------------------
Confidence                  788776510                                                                 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                             ....+....           ......+++.+++||.+....++.++|+||+||++|||++.+.+||...+..+
T Consensus       175 -------~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~  236 (298)
T 3pls_A          175 -------LDREYYSVQ-----------QHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD  236 (298)
T ss_dssp             -------TTGGGGCSC-----------CSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG
T ss_pred             -------cCCcccccc-----------cCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH
Confidence                   000000000           00001234456677778788899999999999999999996666677777777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+...+.+            .||..++..||++.+++..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  281 (298)
T 3pls_A          237 LTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGE  281 (298)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            77777666555444            4788899999999888764

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.80  E-value=5.7e-21  Score=193.16  Aligned_cols=163  Identities=20%  Similarity=0.268  Sum_probs=111.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.||+.||+|||++||+||||||+|||+..++.       .....++      
T Consensus        98 ~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~-------~~~~~kl------  161 (342)
T 2qr7_A           98 MKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG-------NPESIRI------  161 (342)
T ss_dssp             CCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSC-------SGGGEEE------
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCC-------CcCeEEE------
Confidence            46899999998765   4689999999999999999999999999999999965432210       0112344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          .....  
T Consensus       162 ------~Dfg~a~~~----------------------------------------------------------~~~~~--  175 (342)
T 2qr7_A          162 ------CDFGFAKQL----------------------------------------------------------RAENG--  175 (342)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------BCTTC--
T ss_pred             ------EECCCcccC----------------------------------------------------------cCCCC--
Confidence                  788876500                                                          00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCC---C
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRL---K  237 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~---~  237 (513)
                       ......|+.                          .++|||++....|+.++|+||+||++|||++ |..||...   .
T Consensus       176 -~~~~~~gt~--------------------------~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~  227 (342)
T 2qr7_A          176 -LLMTPCYTA--------------------------NFVAPEVLERQGYDAACDIWSLGVLLYTMLT-GYTPFANGPDDT  227 (342)
T ss_dssp             -CBCCSSCCS--------------------------SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCSSCSSTTSC
T ss_pred             -ceeccCCCc--------------------------cccCHHHhcCCCCCCccCeeeHhHHHHHHhc-CCCCCCCCCcCC
Confidence             001112333                          4455666666678999999999999999999 99999753   3


Q ss_pred             cceeccccccccccCCC---------------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 NTEVVDRVQRGIILEKP---------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ~~~~~~~i~~~~~~~~p---------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..++...+..+.....+               .||..++..|+++.++|.+
T Consensus       228 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          228 PEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             HHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             HHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            34555555444332221               3677888888888888765

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.80  E-value=6.1e-21  Score=186.98  Aligned_cols=162  Identities=35%  Similarity=0.596  Sum_probs=121.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..+..++.|++.||.|||+++|+||||||+||+++.++           ..++      
T Consensus       101 ~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~-----------~~kl------  161 (283)
T 3gen_A          101 MANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG-----------VVKV------  161 (283)
T ss_dssp             CTTCBHHHHHHCGGGC--CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTS-----------CEEE------
T ss_pred             cCCCcHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCC-----------CEEE------
Confidence            4689999999885443  68899999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                                 
T Consensus       162 ------~Dfg~~~~~-----------------------------------------------------------------  170 (283)
T 3gen_A          162 ------SDFGLSRYV-----------------------------------------------------------------  170 (283)
T ss_dssp             ------CSTTGGGGB-----------------------------------------------------------------
T ss_pred             ------ccccccccc-----------------------------------------------------------------
Confidence                  788876510                                                                 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                             .......              .....+++.+++||++....++.++|+||+|+++|||+|.|..||...+..+
T Consensus       171 -------~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~  229 (283)
T 3gen_A          171 -------LDDEYTS--------------SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE  229 (283)
T ss_dssp             -------CCHHHHS--------------TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             -------ccccccc--------------ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH
Confidence                   0000000              0001123445667777777889999999999999999987999999888888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.++.+...+            .||..++..||++.+++..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          230 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            87777766555444            5889999999999998764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.80  E-value=6.6e-21  Score=193.32  Aligned_cols=147  Identities=24%  Similarity=0.415  Sum_probs=103.8

Q ss_pred             CchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccccccCCCCcccccCCeEE
Q psy17476         19 GNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYE   98 (513)
Q Consensus        19 ~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~   98 (513)
                      +++..++.++.|++.||+|||+++||||||||+|||++.++           ..++            .|||+++-..  
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~-----------~~kl------------~Dfg~a~~~~--  244 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-----------VVKI------------CDFGLARDIY--  244 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-----------CEEE------------CCCGGGSCTT--
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC-----------cEEE------------Eeccceeeec--
Confidence            78889999999999999999999999999999996665543           3345            7888875100  


Q ss_pred             eeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCce
Q psy17476         99 VMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV  178 (513)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~  178 (513)
                                                                               ...........            
T Consensus       245 ---------------------------------------------------------~~~~~~~~~~~------------  255 (359)
T 3vhe_A          245 ---------------------------------------------------------KDPDYVRKGDA------------  255 (359)
T ss_dssp             ---------------------------------------------------------SCTTCEEC--C------------
T ss_pred             ---------------------------------------------------------ccccchhcccc------------
Confidence                                                                     00000000001            


Q ss_pred             eeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce-eccccccccccCCC---
Q psy17476        179 KEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE-VVDRVQRGIILEKP---  254 (513)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~-~~~~i~~~~~~~~p---  254 (513)
                                    .+++.++|||++....++.++|||||||++|||+|.|..||......+ +...+..+...+.|   
T Consensus       256 --------------~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (359)
T 3vhe_A          256 --------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT  321 (359)
T ss_dssp             --------------EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTC
T ss_pred             --------------CCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCC
Confidence                          123445666667777889999999999999999987999998766433 33444444444333   


Q ss_pred             ---------CCcCCCCCCHHHHHHHHcC
Q psy17476        255 ---------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       255 ---------~~w~~~~~~R~~aeeLL~~  273 (513)
                               .||..++..||++.+++.+
T Consensus       322 ~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          322 TPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence                     4788889999999888764

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.80  E-value=5.1e-21  Score=192.76  Aligned_cols=165  Identities=29%  Similarity=0.445  Sum_probs=121.1

Q ss_pred             CCCCcHHHHHHhcCC---------------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHEN---------------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+...                     ...+++..++.++.||+.||+|||+++|+||||||+||+++.++
T Consensus       132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~  211 (343)
T 1luf_A          132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM  211 (343)
T ss_dssp             CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCC
Confidence            468999999998532                     12578999999999999999999999999999999996665543


Q ss_pred             ccccccCCccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCC
Q psy17476         60 ISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEG  139 (513)
Q Consensus        60 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (513)
                                 ..++            .|||+++..                                            
T Consensus       212 -----------~~kl------------~Dfg~~~~~--------------------------------------------  224 (343)
T 1luf_A          212 -----------VVKI------------ADFGLSRNI--------------------------------------------  224 (343)
T ss_dssp             -----------CEEE------------CCCSCHHHH--------------------------------------------
T ss_pred             -----------eEEE------------eecCCCccc--------------------------------------------
Confidence                       3345            788876500                                            


Q ss_pred             CCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccce
Q psy17476        140 GDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYG  219 (513)
Q Consensus       140 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G  219 (513)
                                                  ....+....             ....+++.++|||++....++.++|+||||
T Consensus       225 ----------------------------~~~~~~~~~-------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG  263 (343)
T 1luf_A          225 ----------------------------YSADYYKAD-------------GNDAIPIRWMPPESIFYNRYTTESDVWAYG  263 (343)
T ss_dssp             ----------------------------TGGGCBC-----------------CCBCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ----------------------------ccCcccccc-------------CCCcccceecChhhhccCCcCcccccHHHH
Confidence                                        000000000             001133445667777777889999999999


Q ss_pred             eeeeeeeecCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        220 VLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       220 ~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      |++|||+++|..||...+..++...+..+..++.|            .||..++..||++.+++..
T Consensus       264 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          264 VVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             HHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            99999998899999988888887777766554444            4788999999999888754

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.80  E-value=7.8e-21  Score=188.87  Aligned_cols=165  Identities=24%  Similarity=0.431  Sum_probs=120.2

Q ss_pred             CCCCcHHHHHHhcCCC---------------------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENT---------------------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~---------------------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+....                     ..+++..+..++.|++.||+|||+++|+||||||+||+++.++
T Consensus       108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~  187 (314)
T 2ivs_A          108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR  187 (314)
T ss_dssp             CTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT
T ss_pred             cCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCC
Confidence            4689999999986431                     1368889999999999999999999999999999997666554


Q ss_pred             ccccccCCccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCC
Q psy17476         60 ISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEG  139 (513)
Q Consensus        60 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (513)
                                 ..++            .|||+++-.                                            
T Consensus       188 -----------~~kl------------~Dfg~~~~~--------------------------------------------  200 (314)
T 2ivs_A          188 -----------KMKI------------SDFGLSRDV--------------------------------------------  200 (314)
T ss_dssp             -----------EEEE------------CCCTTCEEC--------------------------------------------
T ss_pred             -----------CEEE------------ccccccccc--------------------------------------------
Confidence                       2344            778776500                                            


Q ss_pred             CCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccce
Q psy17476        140 GDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYG  219 (513)
Q Consensus       140 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G  219 (513)
                                    ... .........                          .+++.+++||++....++.++||||+|
T Consensus       201 --------------~~~-~~~~~~~~~--------------------------~~~~~y~aPE~~~~~~~~~~~Di~slG  239 (314)
T 2ivs_A          201 --------------YEE-DSYVKRSQG--------------------------RIPVKWMAIESLFDHIYTTQSDVWSFG  239 (314)
T ss_dssp             --------------TTT-SCEECSSCC--------------------------CSCGGGCCHHHHHHCEECHHHHHHHHH
T ss_pred             --------------ccc-ccceeccCC--------------------------CCcccccChhhhcCCCcCchhhHHHHH
Confidence                          000 000000000                          123345666777777889999999999


Q ss_pred             eeeeeeeecCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        220 VLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       220 ~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      |++|||++.|..||...+..++...+..+...+.+            .||..++..||++.+++..
T Consensus       240 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          240 VLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             HHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99999998899999988888887777666554444            4788888999988888753

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.80  E-value=4.1e-21  Score=189.23  Aligned_cols=163  Identities=28%  Similarity=0.479  Sum_probs=119.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        99 ~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~-----------~~kl------  158 (291)
T 1xbb_A           99 AELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-----------YAKI------  158 (291)
T ss_dssp             CTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT-----------EEEE------
T ss_pred             CCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCC-----------cEEE------
Confidence            46899999998864   368899999999999999999999999999999996665543           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.                                                          ........
T Consensus       159 ------~Dfg~~~~----------------------------------------------------------~~~~~~~~  174 (291)
T 1xbb_A          159 ------SDFGLSKA----------------------------------------------------------LRADENYY  174 (291)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCTTCSEE
T ss_pred             ------ccCCccee----------------------------------------------------------eccCCCcc
Confidence                  77777640                                                          00000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ......                          .+.+.+++||++....++.++|+||||+++|||++.|..||...+..+
T Consensus       175 ~~~~~~--------------------------~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  228 (291)
T 1xbb_A          175 KAQTHG--------------------------KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE  228 (291)
T ss_dssp             EC------------------------------CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             cccccC--------------------------CCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            000000                          123345667777777889999999999999999988999999888888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.++..+            .||..++..||++.+++..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  273 (291)
T 1xbb_A          229 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR  273 (291)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            87777766655444            4789999999999988753

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.80  E-value=8.8e-21  Score=197.73  Aligned_cols=127  Identities=17%  Similarity=0.171  Sum_probs=94.7

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++...... ++++..++.++.||+.||+|||+++||||||||+|||++.++..         ..++        
T Consensus       182 ~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~---------~vkL--------  243 (429)
T 3kvw_A          182 SMNLYELIKKNKFQ-GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRS---------GIKV--------  243 (429)
T ss_dssp             CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSC---------CEEE--------
T ss_pred             CCCHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCc---------ceEE--------
Confidence            57999999987643 47899999999999999999999999999999999666655421         1344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||++...                                                          .  .    .
T Consensus       244 ----~DFG~a~~~----------------------------------------------------------~--~----~  255 (429)
T 3kvw_A          244 ----IDFGSSCYE----------------------------------------------------------H--Q----R  255 (429)
T ss_dssp             ----CCCTTCEET----------------------------------------------------------T--C----C
T ss_pred             ----eecccceec----------------------------------------------------------C--C----c
Confidence                788876400                                                          0  0    0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .....                          +++.+||||++....|+.++|||||||++|||++ |..||...+..+.+
T Consensus       256 ~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~l  308 (429)
T 3kvw_A          256 VYTYI--------------------------QSRFYRAPEVILGARYGMPIDMWSLGCILAELLT-GYPLLPGEDEGDQL  308 (429)
T ss_dssp             CCSSC--------------------------SCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHH
T ss_pred             ccccC--------------------------CCCCccChHHHhCCCCCchHHHHhHHHHHHHHHh-CCCCCCCCCHHHHH
Confidence            00111                          3344566677777789999999999999999999 99999877654443

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.80  E-value=4.8e-21  Score=198.77  Aligned_cols=167  Identities=13%  Similarity=0.097  Sum_probs=114.2

Q ss_pred             CCCcHHHHHHhc----CCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEE
Q psy17476          2 RHGSLLNYLRRH----ENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVA   77 (513)
Q Consensus         2 ~~g~L~~~l~~~----~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~   77 (513)
                      .+|+|.+++...    ....++++..+..++.|++.||+|||+++||||||||+|||++.++           ..|+   
T Consensus       187 ~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~-----------~~kL---  252 (413)
T 3dzo_A          187 MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG-----------GVFL---  252 (413)
T ss_dssp             CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC-----------CEEE---
T ss_pred             hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCC-----------eEEE---
Confidence            468999998632    1122468889999999999999999999999999999996665554           3455   


Q ss_pred             eccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCC
Q psy17476         78 LYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ  157 (513)
Q Consensus        78 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  157 (513)
                               .|||+++..                                                   ++         
T Consensus       253 ---------~DFG~a~~~---------------------------------------------------~~---------  263 (413)
T 3dzo_A          253 ---------TGFEHLVRD---------------------------------------------------GA---------  263 (413)
T ss_dssp             ---------CCGGGCEET---------------------------------------------------TE---------
T ss_pred             ---------Eeccceeec---------------------------------------------------CC---------
Confidence                     888887510                                                   00         


Q ss_pred             ccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC
Q psy17476        158 EHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK  237 (513)
Q Consensus       158 ~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~  237 (513)
                          ......| .+|+|||.+.....    +|.          +  .....|+.++|||||||++|||++ |+.||...+
T Consensus       264 ----~~~~~~g-~~y~aPE~~~~~~~----~~~----------~--~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~  321 (413)
T 3dzo_A          264 ----SAVSPIG-RGFAPPETTAERML----PFG----------Q--HHPTLMTFAFDTWTLGLAIYWIWC-ADLPNTDDA  321 (413)
T ss_dssp             ----EECCCCC-TTTCCHHHHHHHTS----TTG----------G--GCCEEECHHHHHHHHHHHHHHHHH-SSCCCCTTG
T ss_pred             ----ccccCCC-CceeCchhhhcccc----ccc----------c--ccCcCCCchhhHHHHHHHHHHHHH-CCCCCCCcc
Confidence                0011224 55555554321100    000          0  044568899999999999999999 999998887


Q ss_pred             cceeccccccccccCCC-------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 NTEVVDRVQRGIILEKP-------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ~~~~~~~i~~~~~~~~p-------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+....+.......++       .||..++..|+++.++|.+
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~  364 (413)
T 3dzo_A          322 ALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET  364 (413)
T ss_dssp             GGSCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             hhhhHHHHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            77776666443322112       5889999999999888864

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.80  E-value=7.7e-21  Score=190.54  Aligned_cols=162  Identities=31%  Similarity=0.554  Sum_probs=119.8

Q ss_pred             CCCCcHHHHHHhcC-------------CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHE-------------NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~-------------~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.+++.+..             ....+++..++.++.|++.||+|||+++|+||||||+||+++.++        
T Consensus       108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~--------  179 (327)
T 1fvr_A          108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY--------  179 (327)
T ss_dssp             CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG--------
T ss_pred             CCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCC--------
Confidence            46899999998754             112478999999999999999999999999999999996665543        


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                         ..++            .|||+++......                                                
T Consensus       180 ---~~kL------------~Dfg~~~~~~~~~------------------------------------------------  196 (327)
T 1fvr_A          180 ---VAKI------------ADFGLSRGQEVYV------------------------------------------------  196 (327)
T ss_dssp             ---CEEE------------CCTTCEESSCEEC------------------------------------------------
T ss_pred             ---eEEE------------cccCcCccccccc------------------------------------------------
Confidence               3344            7888765211000                                                


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                                    ......++                          +.+++||++....++.++||||+||++|||++
T Consensus       197 --------------~~~~~~~~--------------------------~~y~aPE~~~~~~~~~~~Di~slG~il~ellt  236 (327)
T 1fvr_A          197 --------------KKTMGRLP--------------------------VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS  236 (327)
T ss_dssp             --------------CC----CC--------------------------TTTCCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred             --------------cccCCCCC--------------------------ccccChhhhccccCCchhcchHHHHHHHHHHc
Confidence                          00000122                          23455666666778999999999999999998


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .|..||...+..++...+..+.+...+            .||..++..||++.+++..
T Consensus       237 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          237 LGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             TSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            799999988887777777666554444            4788999999999998765

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.80  E-value=8.5e-21  Score=193.86  Aligned_cols=154  Identities=14%  Similarity=0.114  Sum_probs=105.9

Q ss_pred             CcHHHHHHhcCCCCCCchhHH------HHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEE
Q psy17476          4 GSLLNYLRRHENTLGGNVGLL------LDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVA   77 (513)
Q Consensus         4 g~L~~~l~~~~~~~~~~~~~~------~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~   77 (513)
                      |+|.+++.+....  +++..+      ..++.||+.||+|||+++||||||||+|||++.++           ..|+   
T Consensus       172 ~~L~~~l~~~~~~--~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~-----------~~kL---  235 (371)
T 3q60_A          172 VDLELLFSTLDFV--YVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDG-----------RLML---  235 (371)
T ss_dssp             EEHHHHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTS-----------CEEE---
T ss_pred             CCHHHHHHHhccc--cchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCC-----------CEEE---
Confidence            8999999986443  345555      67889999999999999999999999996665554           3455   


Q ss_pred             eccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCC
Q psy17476         78 LYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ  157 (513)
Q Consensus        78 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  157 (513)
                               .|||+++-.                                                   ++         
T Consensus       236 ---------~DFG~a~~~---------------------------------------------------~~---------  246 (371)
T 3q60_A          236 ---------GDVSALWKV---------------------------------------------------GT---------  246 (371)
T ss_dssp             ---------CCGGGEEET---------------------------------------------------TC---------
T ss_pred             ---------Eecceeeec---------------------------------------------------CC---------
Confidence                     888887500                                                   00         


Q ss_pred             ccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc--ccccccCccccceeeeeeeeecCCCCCCC
Q psy17476        158 EHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY--TRFSSKSDVWAYGVLMWEVFTCGKMPYGR  235 (513)
Q Consensus       158 ~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~Dvws~G~~l~el~t~g~~pf~~  235 (513)
                          ......++                          +.++|||++..  ..|+.++|||||||++|||++ |..||..
T Consensus       247 ----~~~~~~~t--------------------------~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ellt-g~~Pf~~  295 (371)
T 3q60_A          247 ----RGPASSVP--------------------------VTYAPREFLNASTATFTHALNAWQLGLSIYRVWC-LFLPFGL  295 (371)
T ss_dssp             ----EEEGGGSC--------------------------GGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHH-SSCSTTB
T ss_pred             ----CccCccCC--------------------------cCCcChhhccCCCCCcCccccHHHHHHHHHHHHh-CCCCCCC
Confidence                00011122                          34455666655  678999999999999999999 9999986


Q ss_pred             CCcce--ecccc---c---cccccCC----C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        236 LKNTE--VVDRV---Q---RGIILEK----P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       236 ~~~~~--~~~~i---~---~~~~~~~----p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .....  ....+   .   .....+.    +        .||..++..|+++.++|.+
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  353 (371)
T 3q60_A          296 VTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET  353 (371)
T ss_dssp             CCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred             cCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            64321  11111   0   0111111    1        4788999999999998875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.80  E-value=8.3e-21  Score=186.91  Aligned_cols=168  Identities=15%  Similarity=0.145  Sum_probs=114.4

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++......  +++..+..++.|++.||+|||+++|+||||||+|||++.+        +.....++        
T Consensus        88 ~~~L~~~~~~~~~~--~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~--------~~~~~~kL--------  149 (296)
T 4hgt_A           88 GPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG--------KKGNLVYI--------  149 (296)
T ss_dssp             CCBHHHHHHHTTSC--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCG--------GGTTCEEE--------
T ss_pred             CCCHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeecc--------CCCCeEEE--------
Confidence            79999999875543  6889999999999999999999999999999999665211        22233455        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++..                                                          .....    
T Consensus       150 ----~Dfg~a~~~----------------------------------------------------------~~~~~----  163 (296)
T 4hgt_A          150 ----IDFGLAKKY----------------------------------------------------------RDART----  163 (296)
T ss_dssp             ----CCCTTCEEC----------------------------------------------------------BCTTT----
T ss_pred             ----ecCccceec----------------------------------------------------------cCccc----
Confidence                788877510                                                          00000    


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                          .....+...              ....+++.+++||++....++.++||||+||++|||++ |+.||...+.....
T Consensus       164 ----~~~~~~~~~--------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~  224 (296)
T 4hgt_A          164 ----HQHIPYREN--------------KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNL-GSLPWQGLKAATKR  224 (296)
T ss_dssp             ----CCBCCCCCS--------------CCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTSSCCCSSSS
T ss_pred             ----CccCCCCcc--------------cccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhc-CCCCCcccchhhhh
Confidence                000000000              01235566777888888889999999999999999999 99999876554333


Q ss_pred             cccc---ccc-ccC-------CC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        243 DRVQ---RGI-ILE-------KP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       243 ~~i~---~~~-~~~-------~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+.   ... ..+       .|        .||..++..||++.+++..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~  274 (296)
T 4hgt_A          225 QKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL  274 (296)
T ss_dssp             SHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred             hhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHH
Confidence            3222   111 111       11        5889999999999888763

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.80  E-value=1.8e-20  Score=190.19  Aligned_cols=164  Identities=16%  Similarity=0.273  Sum_probs=114.1

Q ss_pred             CCCCcHHHHHHhcC-CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHE-NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.+++.+.. ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.        ....++     
T Consensus       108 ~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~--------~~~vkl-----  174 (351)
T 3c0i_A          108 MDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKEN--------SAPVKL-----  174 (351)
T ss_dssp             CSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSST--------TCCEEE-----
T ss_pred             CCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCC--------CCcEEE-----
Confidence            46899999887743 2224689999999999999999999999999999999966654431        111344     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||+++.                                                          .      
T Consensus       175 -------~Dfg~a~~----------------------------------------------------------~------  183 (351)
T 3c0i_A          175 -------GGFGVAIQ----------------------------------------------------------L------  183 (351)
T ss_dssp             -------CCCTTCEE----------------------------------------------------------C------
T ss_pred             -------ecCcceeE----------------------------------------------------------e------
Confidence                   78887650                                                          0      


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                              +.......               ...|++.++|||++....|+.++||||+||++|||++ |..||.... .
T Consensus       184 --------~~~~~~~~---------------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~-~  238 (351)
T 3c0i_A          184 --------GESGLVAG---------------GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS-GCLPFYGTK-E  238 (351)
T ss_dssp             --------CTTSCBCC---------------CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCSSH-H
T ss_pred             --------cCCCeeec---------------CCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHH-CCCCCCCcH-H
Confidence                    00000000               0114455566777777788999999999999999999 999997643 3


Q ss_pred             eeccccccccccCC-------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEK-------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~-------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++...+.++.....       +        .||..++..|+++.++|.+
T Consensus       239 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          239 RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH  287 (351)
T ss_dssp             HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            34444433322211       1        4788899999999999876

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.80  E-value=1.7e-20  Score=192.47  Aligned_cols=160  Identities=16%  Similarity=0.258  Sum_probs=108.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||++|||||||||+|||++.++           ..++      
T Consensus        97 ~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g-----------~vkL------  156 (384)
T 4fr4_A           97 LLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHG-----------HVHI------  156 (384)
T ss_dssp             CTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCC-----------CEEE------
Confidence            46899999998764   468999999999999999999999999999999996665554           3355      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.                                                          +....   
T Consensus       157 ------~DFG~a~~----------------------------------------------------------~~~~~---  169 (384)
T 4fr4_A          157 ------TDFNIAAM----------------------------------------------------------LPRET---  169 (384)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCTTC---
T ss_pred             ------eccceeee----------------------------------------------------------ccCCC---
Confidence                  78888751                                                          00000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+.+|+|||.+...                       ....|+.++|+||+||++|||++ |..||.......
T Consensus       170 -~~~~~~gt~~Y~aPE~~~~~-----------------------~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~  224 (384)
T 4fr4_A          170 -QITTMAGTKPYMAPEMFSSR-----------------------KGAGYSFAVDWWSLGVTAYELLR-GRRPYHIRSSTS  224 (384)
T ss_dssp             -CBCCCCSCGGGCCGGGTCCC-----------------------SSCCBCTTHHHHHHHHHHHHHHH-SSCSSCCCTTSC
T ss_pred             -ceeccCCCccccCCeeeccC-----------------------CCCCCCccceeechHHHHHHHHh-CCCCCCCCCCcc
Confidence             01123366666666654321                       12358999999999999999999 999997554433


Q ss_pred             e---ccccccccccCCC------------CCcCCCCCCHHH-HHHHHcC
Q psy17476        241 V---VDRVQRGIILEKP------------KAWYVGDMSRQR-AESILKQ  273 (513)
Q Consensus       241 ~---~~~i~~~~~~~~p------------~~w~~~~~~R~~-aeeLL~~  273 (513)
                      .   ...+.... ...|            .||..++..|+. +++++.+
T Consensus       225 ~~~~~~~~~~~~-~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h  272 (384)
T 4fr4_A          225 SKEIVHTFETTV-VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF  272 (384)
T ss_dssp             HHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred             HHHHHHHHhhcc-cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence            2   22222211 1112            356666777765 5555543

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.79  E-value=1.1e-20  Score=183.43  Aligned_cols=162  Identities=38%  Similarity=0.617  Sum_probs=119.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        85 ~~~~~L~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~-----------~~kl------  145 (267)
T 3t9t_A           85 MEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ-----------VIKV------  145 (267)
T ss_dssp             CTTCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGG-----------CEEE------
T ss_pred             CCCCcHHHHHhhCccc--CCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCC-----------CEEE------
Confidence            4689999999886543  58889999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++..                                                                 
T Consensus       146 ------~dfg~~~~~-----------------------------------------------------------------  154 (267)
T 3t9t_A          146 ------SDFGMTRFV-----------------------------------------------------------------  154 (267)
T ss_dssp             ------CCTTGGGGB-----------------------------------------------------------------
T ss_pred             ------ccccccccc-----------------------------------------------------------------
Confidence                  778776510                                                                 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                             ........              ....+++.+++||++....++.++|+||+|+++|||++.|..||...+..+
T Consensus       155 -------~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  213 (267)
T 3t9t_A          155 -------LDDQYTSS--------------TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE  213 (267)
T ss_dssp             -------CCHHHHST--------------TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             -------cccccccc--------------ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH
Confidence                   00000000              001123345667777777889999999999999999987899999888777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+...|            .||..++..||++.+++..
T Consensus       214 ~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          214 VVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            77777666554443            4788899999999888764

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.79  E-value=1.2e-20  Score=198.98  Aligned_cols=158  Identities=19%  Similarity=0.361  Sum_probs=116.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   .+++..++.++.||+.||+|||+++|+||||||+|||++.++           ..|+      
T Consensus        98 ~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~-----------~vkL------  157 (476)
T 2y94_A           98 VSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHM-----------NAKI------  157 (476)
T ss_dssp             CSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTC-----------CEEE------
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCC-----------CeEE------
Confidence            46899999998754   468999999999999999999999999999999996655543           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                 ..+.            
T Consensus       158 ------~DFG~a~~~-------------------------------------------------~~~~------------  170 (476)
T 2y94_A          158 ------ADFGLSNMM-------------------------------------------------SDGE------------  170 (476)
T ss_dssp             ------CCCSSCEEC-------------------------------------------------CTTC------------
T ss_pred             ------Eeccchhhc-------------------------------------------------cccc------------
Confidence                  788887500                                                 0000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccc-cccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRF-SSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                       ......|+..                          ++|||++....+ +.++||||+||++|||++ |..||...+..
T Consensus       171 -~~~~~~gt~~--------------------------y~aPE~~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~  222 (476)
T 2y94_A          171 -FLRTSCGSPN--------------------------YAAPEVISGRLYAGPEVDIWSSGVILYALLC-GTLPFDDDHVP  222 (476)
T ss_dssp             -CBCCCCSCST--------------------------TCCHHHHTTCCBCSHHHHHHHHHHHHHHHHH-SSCSSCCSSSH
T ss_pred             -cccccCCCcC--------------------------eEChhhccCCCCCCCcceehhhHHHHHHHhh-CCCCCCCCCHH
Confidence             0011124444                          445555555555 689999999999999999 99999988777


Q ss_pred             eeccccccccccCCC-----------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP-----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p-----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++...+..+....+.           .||..++..|+++.+++.+
T Consensus       223 ~~~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          223 TLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH  267 (476)
T ss_dssp             HHHHHHHTTCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             HHHHHHhcCCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence            777766554332221           4788999999999999976

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.79  E-value=9.3e-21  Score=186.89  Aligned_cols=170  Identities=15%  Similarity=0.082  Sum_probs=114.5

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++......  +++..+..++.|++.||+|||+++|+||||||+||+++.++.      +.....++        
T Consensus        89 ~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~------~~~~~~kl--------  152 (298)
T 1csn_A           89 GPSLEDLLDLCGRK--FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNS------KNANMIYV--------  152 (298)
T ss_dssp             CCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSS------TTTTCEEE--------
T ss_pred             CCCHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCC------CCCCeEEE--------
Confidence            79999999986543  588999999999999999999999999999999977665531      11112344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++-.                                                          ...      
T Consensus       153 ----~Dfg~~~~~----------------------------------------------------------~~~------  164 (298)
T 1csn_A          153 ----VDFGMVKFY----------------------------------------------------------RDP------  164 (298)
T ss_dssp             ----CCCTTCEES----------------------------------------------------------BCT------
T ss_pred             ----EECcccccc----------------------------------------------------------ccc------
Confidence                788876500                                                          000      


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc---
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT---  239 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~---  239 (513)
                           ......+..           ......|++.++|||++....++.++|||||||++|||++ |..||...+..   
T Consensus       165 -----~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~~~~~~  227 (298)
T 1csn_A          165 -----VTKQHIPYR-----------EKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLR-GSLPWQGLKAATNK  227 (298)
T ss_dssp             -----TTCCBCCCC-----------CCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTSSCCSCCHH
T ss_pred             -----ccccccccc-----------CccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHc-CCCCcchhhccccH
Confidence                 000000000           0001235556677777777788999999999999999999 99999875433   


Q ss_pred             eeccccccccc-cC-------CC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGII-LE-------KP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~-~~-------~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +....+..... .+       .+        .||..++..||++.+++..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~  277 (298)
T 1csn_A          228 QKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL  277 (298)
T ss_dssp             HHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred             HHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            22222222111 11       11        5889999999999888653

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.79  E-value=7.4e-21  Score=191.03  Aligned_cols=169  Identities=17%  Similarity=0.166  Sum_probs=114.4

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++.....  .+++..++.++.|++.||+|||+++||||||||+|||++.++...      ....++        
T Consensus        88 ~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~------~~~~kl--------  151 (330)
T 2izr_A           88 GPSLEDLFDLCDR--TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKT------QQVIHI--------  151 (330)
T ss_dssp             CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTC------TTSEEE--------
T ss_pred             CCCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCC------CceEEE--------
Confidence            7999999998644  368999999999999999999999999999999997766654210      011344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++..                                                          ...      
T Consensus       152 ----~DFg~a~~~----------------------------------------------------------~~~------  163 (330)
T 2izr_A          152 ----IDFALAKEY----------------------------------------------------------IDP------  163 (330)
T ss_dssp             ----CCCTTCEES----------------------------------------------------------BCT------
T ss_pred             ----EEcccceee----------------------------------------------------------ecC------
Confidence                788877510                                                          000      


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                           .+....+..           ......|++.++|||++....++.++|||||||++|||++ |..||...+..++.
T Consensus       164 -----~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~-g~~Pf~~~~~~~~~  226 (330)
T 2izr_A          164 -----ETKKHIPYR-----------EHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLR-GSLPWQGLKADTLK  226 (330)
T ss_dssp             -----TTCCBCCCC-----------CCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTTTCCCSSHH
T ss_pred             -----CCCcccccc-----------ccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhc-CCCCccccccccHH
Confidence                 000000000           0001235566677777777889999999999999999999 99999876554443


Q ss_pred             cc---cccccccCC--------C-------CCcCCCCCCHHHHHHHHc
Q psy17476        243 DR---VQRGIILEK--------P-------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       243 ~~---i~~~~~~~~--------p-------~~w~~~~~~R~~aeeLL~  272 (513)
                      +.   +........        |       .||..++..||++.+++.
T Consensus       227 ~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          227 ERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            32   222211111        1       478888899998888765

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.79  E-value=1.9e-20  Score=186.34  Aligned_cols=165  Identities=28%  Similarity=0.437  Sum_probs=118.3

Q ss_pred             CCCCcHHHHHHhcC---CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEE
Q psy17476          1 MRHGSLLNYLRRHE---NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVA   77 (513)
Q Consensus         1 ~~~g~L~~~l~~~~---~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~   77 (513)
                      +++|+|.+++....   ....+++..++.++.|++.||.|||+++|+||||||+||+++.++           ..++   
T Consensus       123 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~-----------~~kl---  188 (313)
T 3brb_A          123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDM-----------TVCV---  188 (313)
T ss_dssp             CTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTS-----------CEEE---
T ss_pred             ccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC-----------cEEE---
Confidence            46899999996532   222478999999999999999999999999999999996665543           3344   


Q ss_pred             eccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCC
Q psy17476         78 LYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ  157 (513)
Q Consensus        78 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  157 (513)
                               .|||+++...                                                 .+..        
T Consensus       189 ---------~Dfg~~~~~~-------------------------------------------------~~~~--------  202 (313)
T 3brb_A          189 ---------ADFGLSKKIY-------------------------------------------------SGDY--------  202 (313)
T ss_dssp             ---------CSCSCC-----------------------------------------------------------------
T ss_pred             ---------eecCcceecc-------------------------------------------------cccc--------
Confidence                     7888765100                                                 0000        


Q ss_pred             ccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC
Q psy17476        158 EHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK  237 (513)
Q Consensus       158 ~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~  237 (513)
                             ...+..                     ..+.+.+++||++....++.++|+|||||++|||++.|..||....
T Consensus       203 -------~~~~~~---------------------~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~  254 (313)
T 3brb_A          203 -------YRQGRI---------------------AKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ  254 (313)
T ss_dssp             ------------------------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             -------cCcccc---------------------cCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence                   000000                     0123345667777777889999999999999999997889999888


Q ss_pred             cceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 NTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..++...+..+.+++.+            .||..++..||++.+++..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          255 NHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             GGGHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            87777777665544433            4788899999999888754

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.79  E-value=1.4e-20  Score=192.67  Aligned_cols=161  Identities=19%  Similarity=0.226  Sum_probs=115.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+...  .+++..+..++.||+.||+|||+++|+||||||+|||+..+         .....++      
T Consensus       168 ~~~~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~---------~~~~~kl------  230 (373)
T 2x4f_A          168 VDGGELFDRIIDESY--NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNR---------DAKQIKI------  230 (373)
T ss_dssp             CTTCEEHHHHHHTGG--GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEET---------TTTEEEE------
T ss_pred             CCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecC---------CCCcEEE------
Confidence            468999999987643  36888999999999999999999999999999999655321         2223345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.                                                          .....   
T Consensus       231 ------~DFG~a~~----------------------------------------------------------~~~~~---  243 (373)
T 2x4f_A          231 ------IDFGLARR----------------------------------------------------------YKPRE---  243 (373)
T ss_dssp             ------CCCSSCEE----------------------------------------------------------CCTTC---
T ss_pred             ------EeCCCcee----------------------------------------------------------cCCcc---
Confidence                  78887750                                                          00000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|                          ++.++|||++....++.++|||||||++|||++ |..||...+..+
T Consensus       244 -~~~~~~g--------------------------t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~  295 (373)
T 2x4f_A          244 -KLKVNFG--------------------------TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS-GLSPFLGDNDAE  295 (373)
T ss_dssp             -BCCCCCS--------------------------SCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHH-SSCTTCCSSHHH
T ss_pred             -ccccccC--------------------------CCcEeChhhccCCCCCcHHhHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence             0000113                          344455666666788999999999999999999 999998887766


Q ss_pred             eccccccccccCC-------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK-------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~-------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+..+........       +        .|+..++..|+++.++|.+
T Consensus       296 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          296 TLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKH  343 (373)
T ss_dssp             HHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            6665543322111       1        5788889999999999876

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.79  E-value=8.2e-21  Score=193.46  Aligned_cols=167  Identities=14%  Similarity=0.106  Sum_probs=112.5

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++..+..  .+++..++.++.||+.||+|||+++||||||||+|||++.+         .....++        
T Consensus       135 g~~L~~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~---------~~~~~kl--------  195 (364)
T 3op5_A          135 GSDLQKIYEANAK--RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK---------NPDQVYL--------  195 (364)
T ss_dssp             EEEHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESS---------CTTCEEE--------
T ss_pred             CCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecC---------CCCeEEE--------
Confidence            7899999988644  36899999999999999999999999999999999666521         2223355        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++-.                                                          ....     
T Consensus       196 ----~DFG~a~~~----------------------------------------------------------~~~~-----  208 (364)
T 3op5_A          196 ----VDYGLAYRY----------------------------------------------------------CPEG-----  208 (364)
T ss_dssp             ----CCCTTCEES----------------------------------------------------------SGGG-----
T ss_pred             ----EECCcceec----------------------------------------------------------ccCC-----
Confidence                888887510                                                          0000     


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc-ee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT-EV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~-~~  241 (513)
                           ....+..            .+...+.|++.+||||++....++.++|||||||++|||++ |..||...... ..
T Consensus       209 -----~~~~~~~------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~Pf~~~~~~~~~  270 (364)
T 3op5_A          209 -----VHKAYAA------------DPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLT-GHLPWEDNLKDPKY  270 (364)
T ss_dssp             -----CCCCSSC------------CSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SCCTTGGGTTCHHH
T ss_pred             -----ccccccc------------CcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHh-CCCCccccccCHHH
Confidence                 0000000            00011235666777777888889999999999999999999 99999854322 22


Q ss_pred             ccccccccc-------------cCCC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        242 VDRVQRGII-------------LEKP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       242 ~~~i~~~~~-------------~~~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ........+             ...|        .||..++..||++.+++..
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~  323 (364)
T 3op5_A          271 VRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDI  323 (364)
T ss_dssp             HHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             HHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            111111100             1112        5899999999999888653

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=1.3e-20  Score=190.07  Aligned_cols=165  Identities=27%  Similarity=0.424  Sum_probs=116.4

Q ss_pred             CCCCcHHHHHHhcCCC--------------------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccc
Q psy17476          1 MRHGSLLNYLRRHENT--------------------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEI   60 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~--------------------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~   60 (513)
                      +++|+|.+++......                    ..+++..+..++.|++.||+|||++||+||||||+||+++.++ 
T Consensus       131 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~-  209 (344)
T 1rjb_A          131 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK-  209 (344)
T ss_dssp             CTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTT-
T ss_pred             CCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCC-
Confidence            4689999999986532                    1368889999999999999999999999999999997665554 


Q ss_pred             cccccCCccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCC
Q psy17476         61 SFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGG  140 (513)
Q Consensus        61 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (513)
                                ..++            .|||+++...                                            
T Consensus       210 ----------~~kL------------~Dfg~~~~~~--------------------------------------------  223 (344)
T 1rjb_A          210 ----------VVKI------------CDFGLARDIM--------------------------------------------  223 (344)
T ss_dssp             ----------EEEE------------CCCGGGSCGG--------------------------------------------
T ss_pred             ----------cEEe------------CCCccCcccc--------------------------------------------
Confidence                      2344            7888775100                                            


Q ss_pred             CCCCCCCCEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCcccccee
Q psy17476        141 DLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGV  220 (513)
Q Consensus       141 ~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~  220 (513)
                                    .            ..      .......         ..+++.++|||++....++.++|||||||
T Consensus       224 --------------~------------~~------~~~~~~~---------~~~t~~y~aPE~~~~~~~~~~~Di~slG~  262 (344)
T 1rjb_A          224 --------------S------------DS------NYVVRGN---------ARLPVKWMAPESLFEGIYTIKSDVWSYGI  262 (344)
T ss_dssp             --------------G------------CT------TSEEETT---------EEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             --------------c------------Cc------cceeccC---------ccCccCccCHHHhccCCCChhHhHHHHHH
Confidence                          0            00      0000000         01233456677777778899999999999


Q ss_pred             eeeeeeecCCCCCCCCCccee-ccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        221 LMWEVFTCGKMPYGRLKNTEV-VDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       221 ~l~el~t~g~~pf~~~~~~~~-~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++|||+|.|..||......+. ...+..+.+++.+            .||..++..||++.+++..
T Consensus       263 il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          263 LLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             HHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            999999879999987765433 3333444444333            5899999999999998764

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.79  E-value=1.5e-20  Score=185.14  Aligned_cols=168  Identities=15%  Similarity=0.163  Sum_probs=113.5

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++......  +++..+..++.|++.||+|||+++|+||||||+||+++.+        +.....++        
T Consensus        88 ~~~L~~~~~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~--------~~~~~~kl--------  149 (296)
T 3uzp_A           88 GPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG--------KKGNLVYI--------  149 (296)
T ss_dssp             CCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCG--------GGTTCEEE--------
T ss_pred             CCCHHHHHHhhccC--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecC--------CCCCeEEE--------
Confidence            78999999865543  6889999999999999999999999999999999665321        22233455        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++-.                                                          .....    
T Consensus       150 ----~Dfg~~~~~----------------------------------------------------------~~~~~----  163 (296)
T 3uzp_A          150 ----IDFGLAKKY----------------------------------------------------------RDART----  163 (296)
T ss_dssp             ----CCCTTCEEC----------------------------------------------------------BCTTT----
T ss_pred             ----eeCCCcccc----------------------------------------------------------ccccc----
Confidence                788876510                                                          00000    


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc---
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT---  239 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~---  239 (513)
                          .....+..+              ....+++.++|||++....++.++|||||||++|||++ |+.||...+..   
T Consensus       164 ----~~~~~~~~~--------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~  224 (296)
T 3uzp_A          164 ----HQHIPYREN--------------KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNL-GSLPWQGLKAATKR  224 (296)
T ss_dssp             ----CCBCCCCCS--------------CCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTSSCCCSSSS
T ss_pred             ----ccccccccc--------------cccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHh-CCCCCCCcCchhhh
Confidence                000000000              01235566677777887889999999999999999999 99999865432   


Q ss_pred             eecccccccc-ccC-------CC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGI-ILE-------KP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~-~~~-------~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +....+.... ..+       .|        .||..++..||++.+++..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  274 (296)
T 3uzp_A          225 QKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL  274 (296)
T ss_dssp             SHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred             hhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHH
Confidence            2233332211 111       11        5889999999999888753

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.79  E-value=4.2e-21  Score=189.45  Aligned_cols=163  Identities=28%  Similarity=0.458  Sum_probs=112.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        95 ~~~~~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~-----------~~kl------  155 (295)
T 3ugc_A           95 LPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----------RVKI------  155 (295)
T ss_dssp             CTTCBHHHHHHHCGGG--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-----------EEEE------
T ss_pred             CCCCCHHHHHHhcccc--cCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCC-----------eEEE------
Confidence            4689999999987543  58889999999999999999999999999999996665554           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-..                                                          .... .
T Consensus       156 ------~Dfg~~~~~~----------------------------------------------------------~~~~-~  170 (295)
T 3ugc_A          156 ------GDFGLTKVLP----------------------------------------------------------QDKE-F  170 (295)
T ss_dssp             ------CCCCSCC-------------------------------------------------------------------
T ss_pred             ------ccCccccccc----------------------------------------------------------CCcc-e
Confidence                  7888775100                                                          0000 0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc-
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT-  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~-  239 (513)
                      .....                         ...+.+.++|||++....++.++||||+||++|||++ |..|+...... 
T Consensus       171 ~~~~~-------------------------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~~~~~~~~~~  224 (295)
T 3ugc_A          171 FKVKE-------------------------PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPPAEF  224 (295)
T ss_dssp             ------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHH-TTCTTCSHHHHH
T ss_pred             eeecc-------------------------CCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHh-cccccCCChHHH
Confidence            00000                         0012334566777777789999999999999999999 98887543211 


Q ss_pred             ---------------eeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 ---------------EVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ---------------~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                                     .+...+..+.+.+.|            .||..++..||++.+++..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~  285 (295)
T 3ugc_A          225 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR  285 (295)
T ss_dssp             HHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                           222333334444433            5899999999999988753

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.79  E-value=2.3e-20  Score=200.02  Aligned_cols=159  Identities=21%  Similarity=0.300  Sum_probs=112.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |+||+|.+++.+.... ++++..++.++.||+.||+|||++|||||||||+|||++.++           ..|+      
T Consensus       266 ~~gg~L~~~l~~~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g-----------~vKL------  327 (576)
T 2acx_A          266 MNGGDLKFHIYHMGQA-GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG-----------HIRI------  327 (576)
T ss_dssp             CCSCBHHHHHHSSSSC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCC-----------CeEE------
Confidence            5789999999886543 479999999999999999999999999999999996665544           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                 ..+.            
T Consensus       328 ------~DFGla~~~-------------------------------------------------~~~~------------  340 (576)
T 2acx_A          328 ------SDLGLAVHV-------------------------------------------------PEGQ------------  340 (576)
T ss_dssp             ------CCCTTCEEC-------------------------------------------------CTTC------------
T ss_pred             ------Eecccceec-------------------------------------------------ccCc------------
Confidence                  888887500                                                 0000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc-
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT-  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~-  239 (513)
                       ......                          |++.+||||++....|+.++|+||+||++|||++ |..||...+.. 
T Consensus       341 -~~~~~~--------------------------GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLlt-G~~PF~~~~~~~  392 (576)
T 2acx_A          341 -TIKGRV--------------------------GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA-GQSPFQQRKKKI  392 (576)
T ss_dssp             -CEECCC--------------------------SCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHH-SSCSSSCSSSCC
T ss_pred             -cccccC--------------------------CCccccCHHHHcCCCCCccchHHHHHHHHHHHHh-CCCCCcccccch
Confidence             001112                          3445556666777788999999999999999999 99999865432 


Q ss_pred             ---eeccccccccccCCC------------CCcCCCCCCHH-----HHHHHHcC
Q psy17476        240 ---EVVDRVQRGIILEKP------------KAWYVGDMSRQ-----RAESILKQ  273 (513)
Q Consensus       240 ---~~~~~i~~~~~~~~p------------~~w~~~~~~R~-----~aeeLL~~  273 (513)
                         ++...+.... ...|            .++..++..|+     .+++++.+
T Consensus       393 ~~~~i~~~i~~~~-~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          393 KREEVERLVKEVP-EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             CHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             hHHHHHHHhhccc-ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence               2233332221 1111            35777888887     78888876

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.79  E-value=3e-21  Score=192.27  Aligned_cols=162  Identities=17%  Similarity=0.225  Sum_probs=110.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++++...   ++++..+..++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus        98 ~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~-----------~~kl------  157 (311)
T 3ork_A           98 VDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN-----------AVKV------  157 (311)
T ss_dssp             CCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTS-----------CEEE------
T ss_pred             CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCC-----------CEEE------
Confidence            46899999998865   468999999999999999999999999999999996665544           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          .......
T Consensus       158 ------~Dfg~a~~~----------------------------------------------------------~~~~~~~  173 (311)
T 3ork_A          158 ------MDFGIARAI----------------------------------------------------------ADSGNSV  173 (311)
T ss_dssp             ------CCCSCC--------------------------------------------------------------------
T ss_pred             ------eeccCcccc----------------------------------------------------------ccccccc
Confidence                  788876510                                                          0000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+                          +.++|||++....++.++||||+||++|||++ |..||...+..+
T Consensus       174 ~~~~~~~gt--------------------------~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~  226 (311)
T 3ork_A          174 TQTAAVIGT--------------------------AQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSPVS  226 (311)
T ss_dssp             --------C--------------------------CTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHH-SSCSCCCSSHHH
T ss_pred             ccccccCcC--------------------------cccCCHHHhcCCCCCchHhHHHHHHHHHHHHh-CCCCCCCCChHH
Confidence            000011133                          44455666666788999999999999999999 999998877655


Q ss_pred             eccccccccccC-------CC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILE-------KP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~-------~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +..........+       .+        +||..++..|+++.+.|.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~  274 (311)
T 3ork_A          227 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA  274 (311)
T ss_dssp             HHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             HHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence            544433222211       11        4788888888866665543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.79  E-value=1.5e-20  Score=187.80  Aligned_cols=55  Identities=25%  Similarity=0.259  Sum_probs=49.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPS   55 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~   55 (513)
                      +++|+|.+++.+.....++++..++.++.|++.||+|||+++|+||||||+|||+
T Consensus        91 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll  145 (319)
T 4euu_A           91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMR  145 (319)
T ss_dssp             CTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             CCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE
Confidence            4689999999987655457999999999999999999999999999999999655

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.79  E-value=2.8e-20  Score=189.54  Aligned_cols=57  Identities=18%  Similarity=0.202  Sum_probs=49.1

Q ss_pred             CCCCcHHHHHHhcCC--CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccC
Q psy17476          1 MRHGSLLNYLRRHEN--TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSL   57 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~   57 (513)
                      |++|+|.+++++...  ...+++..++.++.||+.||+|||+++||||||||+|||++.
T Consensus       149 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~  207 (365)
T 3e7e_A          149 YSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGN  207 (365)
T ss_dssp             CCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECG
T ss_pred             cCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecc
Confidence            578999999987421  224799999999999999999999999999999999976655

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.79  E-value=2e-20  Score=186.03  Aligned_cols=173  Identities=16%  Similarity=0.191  Sum_probs=113.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++++....  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        89 ~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~-----------~~kl------  149 (310)
T 3s95_A           89 IKGGTLRGIIKSMDSQ--YPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENK-----------NVVV------  149 (310)
T ss_dssp             CTTCBHHHHHHHCCTT--SCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTS-----------CEEE------
T ss_pred             cCCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCC-----------CEEE------
Confidence            4689999999986543  58889999999999999999999999999999996665543           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...-                                                          ...  
T Consensus       150 ------~Dfg~~~~~~~----------------------------------------------------------~~~--  163 (310)
T 3s95_A          150 ------ADFGLARLMVD----------------------------------------------------------EKT--  163 (310)
T ss_dssp             ------CCCTTCEECC----------------------------------------------------------------
T ss_pred             ------eecccceeccc----------------------------------------------------------ccc--
Confidence                  78887751000                                                          000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                          ...+......+..         .....+.|++.++|||++....++.++|||||||++|||++ |..||.......
T Consensus       164 ----~~~~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~  229 (310)
T 3s95_A          164 ----QPEGLRSLKKPDR---------KKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG-RVNADPDYLPRT  229 (310)
T ss_dssp             -----------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-TCCSSTTTSCBC
T ss_pred             ----ccccccccccccc---------ccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhc-CCCCCcchhhhH
Confidence                0000000000000         00001235666777777888889999999999999999999 999987654432


Q ss_pred             ecccc--cccc----ccCCC--------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRV--QRGI----ILEKP--------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i--~~~~----~~~~p--------~~w~~~~~~R~~aeeLL~  272 (513)
                      .....  ....    ....+        .||..++..||++.+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          230 MDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             TTSSBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhhhhhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            21111  1111    11111        589999999999998875

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.79  E-value=2e-20  Score=186.43  Aligned_cols=55  Identities=16%  Similarity=0.153  Sum_probs=47.6

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++.+....  +++..++.++.|++.||+|||++||+||||||+|||++.++
T Consensus       102 ~~~l~~~~~~~~~~--~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~  156 (311)
T 3niz_A          102 EKDLKKVLDENKTG--LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG  156 (311)
T ss_dssp             SEEHHHHHHTCTTC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             CCCHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCC
Confidence            47899999886543  68899999999999999999999999999999996665554

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=1.1e-20  Score=191.98  Aligned_cols=160  Identities=18%  Similarity=0.220  Sum_probs=107.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.||+.||+|||+++|+||||||+|||++.++           ..++      
T Consensus       141 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-----------~~kl------  200 (355)
T 1vzo_A          141 INGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG-----------HVVL------  200 (355)
T ss_dssp             CCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-----------cEEE------
Confidence            46899999999865   368899999999999999999999999999999996655543           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          .....  
T Consensus       201 ------~DfG~a~~~----------------------------------------------------------~~~~~--  214 (355)
T 1vzo_A          201 ------TDFGLSKEF----------------------------------------------------------VADET--  214 (355)
T ss_dssp             ------SCSSEEEEC----------------------------------------------------------CGGGG--
T ss_pred             ------eeCCCCeec----------------------------------------------------------ccCCC--
Confidence                  788877500                                                          00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc--ccccccCccccceeeeeeeeecCCCCCCCCCc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY--TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN  238 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~  238 (513)
                      .......|+..|+|                          ||++..  ..++.++|||||||++|||++ |..||.....
T Consensus       215 ~~~~~~~gt~~y~a--------------------------PE~~~~~~~~~~~~~DvwslG~il~ell~-g~~pf~~~~~  267 (355)
T 1vzo_A          215 ERAYDFCGTIEYMA--------------------------PDIVRGGDSGHDKAVDWWSLGVLMYELLT-GASPFTVDGE  267 (355)
T ss_dssp             GGGCGGGSCCTTCC--------------------------HHHHTTCC---CTHHHHHHHHHHHHHHHH-SSCTTSCTTS
T ss_pred             CcccCcccCcCccC--------------------------hhhhcCCCCCCCchhhHHHHHHHHHHHHH-CCCCCccCCc
Confidence            00001124444444                          554442  357889999999999999999 9999975543


Q ss_pred             ceecc----ccccccccCCC-----------CCcCCCCCCHH-----HHHHHHcC
Q psy17476        239 TEVVD----RVQRGIILEKP-----------KAWYVGDMSRQ-----RAESILKQ  273 (513)
Q Consensus       239 ~~~~~----~i~~~~~~~~p-----------~~w~~~~~~R~-----~aeeLL~~  273 (513)
                      .....    .+.......++           +||..++..|+     .+++++.+
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          268 KNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             CCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             cchHHHHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            32222    22211111111           47888899998     88898876

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.79  E-value=9.1e-21  Score=185.37  Aligned_cols=159  Identities=32%  Similarity=0.591  Sum_probs=116.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.... .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        97 ~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----------~~~l------  158 (278)
T 1byg_A           97 MAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN-----------VAKV------  158 (278)
T ss_dssp             CTTEEHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS-----------CEEE------
T ss_pred             CCCCCHHHHHHhcccc-cCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCC-----------cEEE------
Confidence            3578999999886532 258889999999999999999999999999999996665544           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                               
T Consensus       159 ------~Dfg~~~~~~~---------------------------------------------------------------  169 (278)
T 1byg_A          159 ------SDFGLTKEASS---------------------------------------------------------------  169 (278)
T ss_dssp             ------CCCCC---------------------------------------------------------------------
T ss_pred             ------eeccccccccc---------------------------------------------------------------
Confidence                  77777651000                                                               


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......++..                          +++||++....++.++|+||+|+++|||++.|..||...+..+
T Consensus       170 -~~~~~~~~~~--------------------------y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~  222 (278)
T 1byg_A          170 -TQDTGKLPVK--------------------------WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD  222 (278)
T ss_dssp             -------CCTT--------------------------TSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG
T ss_pred             -cccCCCcccc--------------------------ccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence             0000012333                          4456666666789999999999999999987999999888777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++.+...+            .||..++..||++.+++..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  267 (278)
T 1byg_A          223 VVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ  267 (278)
T ss_dssp             HHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHH
Confidence            77777666554433            4788889999998888753

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.79  E-value=1.8e-20  Score=183.29  Aligned_cols=157  Identities=18%  Similarity=0.246  Sum_probs=115.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||++||+||||||+||+++.++           ..++      
T Consensus        91 ~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~-----------~~~l------  150 (279)
T 3fdn_A           91 APLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----------ELKI------  150 (279)
T ss_dssp             CTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCC-----------CEEE------
Confidence            46799999998865   368899999999999999999999999999999996665554           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....-                                                          .    
T Consensus       151 ------~Dfg~~~~~~~----------------------------------------------------------~----  162 (279)
T 3fdn_A          151 ------ADFGWSVHAPS----------------------------------------------------------S----  162 (279)
T ss_dssp             ------CSCCEESCC-----------------------------------------------------------------
T ss_pred             ------EeccccccCCc----------------------------------------------------------c----
Confidence                  77776541000                                                          0    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..                          +++||++....++.++||||+|+++|+|++ |..||...+..+
T Consensus       163 -~~~~~~~~~~--------------------------y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~  214 (279)
T 3fdn_A          163 -RRTDLCGTLD--------------------------YLPPEMIEGRMHDEKVDLWSLGVLCYEFLV-GKPPFEANTYQE  214 (279)
T ss_dssp             ------CCCCT--------------------------TCCHHHHTTCCCCTTHHHHHHHHHHHHHHH-SSCTTCCSSHHH
T ss_pred             -cccccCCCCC--------------------------ccCHhHhccCCCCccchhHhHHHHHHHHHH-CCCCCCCCcHHH
Confidence             0001123334                          445566666678999999999999999999 999999887776


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.......++           .||..++..|+++.++|.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          215 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             HHHHHHHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             HHHHHHhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            66666443322211           5789999999999999986

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.79  E-value=8.7e-21  Score=187.46  Aligned_cols=159  Identities=14%  Similarity=0.224  Sum_probs=107.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   ++++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        93 ~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~-----------~~kl------  152 (294)
T 4eqm_A           93 IEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK-----------TLKI------  152 (294)
T ss_dssp             CCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-----------CEEE------
Confidence            46899999998875   468999999999999999999999999999999996665544           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...-                                                 ..           .
T Consensus       153 ------~Dfg~~~~~~~-------------------------------------------------~~-----------~  166 (294)
T 4eqm_A          153 ------FDFGIAKALSE-------------------------------------------------TS-----------L  166 (294)
T ss_dssp             ------CCCSSSTTC-----------------------------------------------------------------
T ss_pred             ------EeCCCcccccc-------------------------------------------------cc-----------c
Confidence                  78887751000                                                 00           0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+..                          ++|||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       167 ~~~~~~~gt~~--------------------------y~aPE~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~  219 (294)
T 4eqm_A          167 TQTNHVLGTVQ--------------------------YFSPEQAKGEATDECTDIYSIGIVLYEMLV-GEPPFNGETAVS  219 (294)
T ss_dssp             --------CCS--------------------------SCCHHHHHTCCCCTTHHHHHHHHHHHHHHH-SSCSSCSSCHHH
T ss_pred             cccCccccCcc--------------------------ccCHhHhcCCCCCchHhHHHHHHHHHHHHh-CCCCCCCCChHH
Confidence            00001123444                          455566666678999999999999999999 999998776544


Q ss_pred             ecccccccccc--------CCC--------CCcCCCCCCHH-HHHHHHc
Q psy17476        241 VVDRVQRGIIL--------EKP--------KAWYVGDMSRQ-RAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~--------~~p--------~~w~~~~~~R~-~aeeLL~  272 (513)
                      ..........+        ..|        +||..++..|+ .+++++.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~  268 (294)
T 4eqm_A          220 IAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKD  268 (294)
T ss_dssp             HHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHH
T ss_pred             HHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHH
Confidence            33222211111        111        46777888887 5555543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.79  E-value=1.2e-20  Score=185.34  Aligned_cols=163  Identities=30%  Similarity=0.485  Sum_probs=119.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.... .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        91 ~~~~~L~~~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~-----------~~~l------  152 (288)
T 3kfa_A           91 MTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH-----------LVKV------  152 (288)
T ss_dssp             CTTEEHHHHHHHCCTT-TSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGG-----------CEEE------
T ss_pred             CCCCcHHHHHHhcccC-CccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCC-----------CEEE------
Confidence            4679999999986543 478999999999999999999999999999999996665543           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++.-..                                                            ....
T Consensus       153 ------~Dfg~~~~~~------------------------------------------------------------~~~~  166 (288)
T 3kfa_A          153 ------ADFGLSRLMT------------------------------------------------------------GDTY  166 (288)
T ss_dssp             ------CCCCGGGTSC------------------------------------------------------------SSSS
T ss_pred             ------ccCccceecc------------------------------------------------------------CCcc
Confidence                  7777765100                                                            0000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .....                          ..+++.+++||++....++.++|+||+|+++|+|+++|..||...+..+
T Consensus       167 ~~~~~--------------------------~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~  220 (288)
T 3kfa_A          167 TAHAG--------------------------AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ  220 (288)
T ss_dssp             EEETT--------------------------EEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             ccccC--------------------------CccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            00000                          0122345667777777889999999999999999988999999888877


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+....+.+.+            .||..++..||++.+++..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~  265 (288)
T 3kfa_A          221 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA  265 (288)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHH
Confidence            77777666555444            4688888888888887653

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.79  E-value=3.8e-20  Score=181.28  Aligned_cols=161  Identities=20%  Similarity=0.277  Sum_probs=117.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+||+++.++.        ....++      
T Consensus        87 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~--------~~~~kl------  149 (284)
T 3kk8_A           87 VTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK--------GAAVKL------  149 (284)
T ss_dssp             CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSST--------TCCEEE------
T ss_pred             CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCC--------CCcEEE------
Confidence            46899999998875   3688999999999999999999999999999999976655432        112344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++..                                                          .... .  
T Consensus       150 ------~Dfg~~~~----------------------------------------------------------~~~~-~--  162 (284)
T 3kk8_A          150 ------ADFGLAIE----------------------------------------------------------VNDS-E--  162 (284)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCSS-C--
T ss_pred             ------eeceeeEE----------------------------------------------------------cccC-c--
Confidence                  77776640                                                          0000 0  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ....                          ..+++.++|||++....++.++||||+|+++|+|++ |..||...+..+
T Consensus       163 -~~~~--------------------------~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~pf~~~~~~~  214 (284)
T 3kk8_A          163 -AWHG--------------------------FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV-GYPPFWDEDQHR  214 (284)
T ss_dssp             -BCCC--------------------------SCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -cccC--------------------------CCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHH-CCCCCCCCchhH
Confidence             0000                          123445566666777788999999999999999999 999998887777


Q ss_pred             eccccccccc-cCCC--------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGII-LEKP--------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~-~~~p--------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.. .+.+              .||..++..|+++.++|.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          215 LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             HHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            7666654322 2211              4788999999999999886

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.79  E-value=2.7e-20  Score=191.63  Aligned_cols=170  Identities=16%  Similarity=0.227  Sum_probs=109.5

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .+|+|.+++.+..   .+++..++.++.||+.||+|||+++||||||||+|||++.            ...|+       
T Consensus       138 ~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~------------~~~kl-------  195 (390)
T 2zmd_A          138 GNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD------------GMLKL-------  195 (390)
T ss_dssp             CSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESS------------SCEEE-------
T ss_pred             CCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEEC------------CeEEE-------
Confidence            5789999999865   4688899999999999999999999999999999965532            23455       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .|||+++....                                                 +..          ..
T Consensus       196 -----~DFG~a~~~~~-------------------------------------------------~~~----------~~  211 (390)
T 2zmd_A          196 -----IDFGIANQMQP-------------------------------------------------DTT----------SV  211 (390)
T ss_dssp             -----CCCSSSCCC------------------------------------------------------------------
T ss_pred             -----EecCccccccC-------------------------------------------------CCc----------cc
Confidence                 88888761000                                                 000          00


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc-ce
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TE  240 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~-~~  240 (513)
                      ......|+..|+|||++.....-.               ........|+.++|||||||++|||++ |..||..... ..
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~---------------~~~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~  275 (390)
T 2zmd_A          212 VKDSQVGAVNYMPPEAIKDMSSSR---------------ENGKSKSKISPKSDVWSLGCILYYMTY-GKTPFQQIINQIS  275 (390)
T ss_dssp             --CCSCCCGGGCCHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHH-SSCTTTTCCCHHH
T ss_pred             cCCCCCcCCCccChHHhhhccccc---------------cccccccCCCChhhHHHHHHHHHHHHH-CCCcchhhhHHHH
Confidence            001223666666666543210000               000011367899999999999999999 9999976533 12


Q ss_pred             ecccc-ccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRV-QRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i-~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+..+ ......+.|            .||..++..|+++.++|.+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          276 KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            22222 212222222            4789999999999999986

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.79  E-value=2.9e-20  Score=188.44  Aligned_cols=161  Identities=17%  Similarity=0.215  Sum_probs=110.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||+|||+++|+||||||+|||++.+        +.....++      
T Consensus       130 ~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~--------~~~~~~kl------  192 (349)
T 2w4o_A          130 VTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATP--------APDAPLKI------  192 (349)
T ss_dssp             CCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSS--------STTCCEEE------
T ss_pred             CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecC--------CCCCCEEE------
Confidence            46899999998764   36899999999999999999999999999999999665531        11233455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-..                                                          ...   
T Consensus       193 ------~Dfg~a~~~~----------------------------------------------------------~~~---  205 (349)
T 2w4o_A          193 ------ADFGLSKIVE----------------------------------------------------------HQV---  205 (349)
T ss_dssp             ------CCCC----------------------------------------------------------------------
T ss_pred             ------ccCccccccC----------------------------------------------------------ccc---
Confidence                  7888765100                                                          000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......                          |++.++|||++....++.++|||||||++|||++ |..||......+
T Consensus       206 -~~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~  257 (349)
T 2w4o_A          206 -LMKTVC--------------------------GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLC-GFEPFYDERGDQ  257 (349)
T ss_dssp             ----------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCTTCCTTCHH
T ss_pred             -cccccc--------------------------CCCCccCHHHhcCCCCCcccchHHHHHHHHHHHh-CCCCCCCCcccH
Confidence             000111                          3344556666666788999999999999999999 999997665543


Q ss_pred             -ecccccccccc-CC------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 -VVDRVQRGIIL-EK------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 -~~~~i~~~~~~-~~------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                       +...+..+... +.      +        .||..++..|+++.++|.+
T Consensus       258 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          258 FMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             HHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             44444332221 11      1        5788899999999999986

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.79  E-value=1.1e-20  Score=184.83  Aligned_cols=162  Identities=29%  Similarity=0.524  Sum_probs=117.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++...... .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        89 ~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~-----------~~kl------  150 (279)
T 1qpc_A           89 MENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL-----------SCKI------  150 (279)
T ss_dssp             CTTCBHHHHTTSHHHH-TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS-----------CEEE------
T ss_pred             CCCCCHHHHHhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCC-----------CEEE------
Confidence            4689999999875422 368889999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                          ....  .
T Consensus       151 ------~Dfg~~~~~----------------------------------------------------------~~~~--~  164 (279)
T 1qpc_A          151 ------ADFGLARLI----------------------------------------------------------EDNE--Y  164 (279)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------SSSC--E
T ss_pred             ------CCCcccccc----------------------------------------------------------cCcc--c
Confidence                  778776500                                                          0000  0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ......                          .+.+.++|||++....++.++|+||+||++|||++.|..||...+..+
T Consensus       165 ~~~~~~--------------------------~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~  218 (279)
T 1qpc_A          165 TAREGA--------------------------KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE  218 (279)
T ss_dssp             ECCTTC--------------------------CCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             ccccCC--------------------------CCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH
Confidence            000000                          122334566667667789999999999999999987899999888777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+.++.+...+            .||..++..||++.+++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          219 VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            77777666554443            478888888998888765

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.79  E-value=2e-20  Score=189.52  Aligned_cols=157  Identities=20%  Similarity=0.231  Sum_probs=113.0

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .|+|.+++.....  ++++..+..++.|++.||+|||+++|+||||||+|||++.++           ..++        
T Consensus       137 ~g~l~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-----------~~kL--------  195 (348)
T 1u5q_A          137 LGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG-----------LVKL--------  195 (348)
T ss_dssp             SEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT-----------EEEE--------
T ss_pred             CCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC-----------CEEE--------
Confidence            4789999987654  368899999999999999999999999999999996665544           3344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++..                                                          ..       
T Consensus       196 ----~DfG~a~~~----------------------------------------------------------~~-------  206 (348)
T 1u5q_A          196 ----GDFGSASIM----------------------------------------------------------AP-------  206 (348)
T ss_dssp             ----CCCTTCBSS----------------------------------------------------------SS-------
T ss_pred             ----eeccCceec----------------------------------------------------------CC-------
Confidence                788876510                                                          00       


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .....|+..|+|||.+...                       ....++.++|||||||++|||++ |..||...+..+.+
T Consensus       207 ~~~~~gt~~y~aPE~~~~~-----------------------~~~~~~~~~DiwslG~il~ell~-g~~p~~~~~~~~~~  262 (348)
T 1u5q_A          207 ANSFVGTPYWMAPEVILAM-----------------------DEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSAL  262 (348)
T ss_dssp             BCCCCSCGGGCCHHHHHTT-----------------------SSCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHH
T ss_pred             CCcccCCcceeCHhhhccc-----------------------cCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCChHHHH
Confidence            0011245555555443210                       23568899999999999999999 99999877765555


Q ss_pred             cccccccccCCC-------------CCcCCCCCCHHHHHHHHcC
Q psy17476        243 DRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       243 ~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+..+..+...             .||..++..||+++++|.+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          263 YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             HHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             HHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            555433322211             4789999999999999876

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.78  E-value=1.3e-20  Score=189.05  Aligned_cols=55  Identities=9%  Similarity=0.112  Sum_probs=48.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++.+..   ++++..++.++.|++.||+|||+++|+||||||+|||++.+
T Consensus        88 ~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~  142 (325)
T 3kn6_A           88 LNGGELFERIKKKK---HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDE  142 (325)
T ss_dssp             CCSCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC-
T ss_pred             cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecC
Confidence            46899999999865   46899999999999999999999999999999999666544

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.78  E-value=1.4e-20  Score=188.62  Aligned_cols=161  Identities=17%  Similarity=0.237  Sum_probs=109.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++....   ++++..++.++.|++.||+|||++||+||||||+|||++.++           ..++      
T Consensus        87 ~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~-----------~~kl------  146 (323)
T 3tki_A           87 CSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----------NLKI------  146 (323)
T ss_dssp             CTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----------CEEE------
T ss_pred             CCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCC-----------CEEE------
Confidence            46889999987654   468999999999999999999999999999999996665543           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                          ...... 
T Consensus       147 ------~Dfg~a~~~----------------------------------------------------------~~~~~~-  161 (323)
T 3tki_A          147 ------SDFGLATVF----------------------------------------------------------RYNNRE-  161 (323)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------EETTEE-
T ss_pred             ------EEeecccee----------------------------------------------------------ccCCcc-
Confidence                  788877510                                                          000000 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccc-cccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRF-SSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                      .......|                          ++.++|||++....+ +.++||||+||++|||++ |..||......
T Consensus       162 ~~~~~~~g--------------------------t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~  214 (323)
T 3tki_A          162 RLLNKMCG--------------------------TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPWDQPSDS  214 (323)
T ss_dssp             CCBCSCCS--------------------------CGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHH-SSCSCSSSCTT
T ss_pred             cccCCCcc--------------------------CcCccCcHHhccCCCCCCcccHHHHHHHHHHHHh-CCCCCCCCchH
Confidence            00011123                          444455555555554 778999999999999999 99999765543


Q ss_pred             ee-cccc-ccccccCC------------CCCcCCCCCCHHHHHHHHcC
Q psy17476        240 EV-VDRV-QRGIILEK------------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~-~~~i-~~~~~~~~------------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      .. .... ......+.            .+||..++..|+++++++.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          215 CQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             SHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            22 1111 11111111            15788999999999999986

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.78  E-value=1.9e-20  Score=189.12  Aligned_cols=170  Identities=16%  Similarity=0.225  Sum_probs=109.4

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .+|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+|||++..            ..++       
T Consensus        91 ~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~------------~~kl-------  148 (343)
T 3dbq_A           91 GNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG------------MLKL-------  148 (343)
T ss_dssp             CSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETT------------EEEE-------
T ss_pred             CCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECC------------cEEE-------
Confidence            5789999999865   46888999999999999999999999999999999665422            2344       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .|||+++...-                                                 .          ....
T Consensus       149 -----~DFG~a~~~~~-------------------------------------------------~----------~~~~  164 (343)
T 3dbq_A          149 -----IDFGIANQMQP-------------------------------------------------D----------TTSV  164 (343)
T ss_dssp             -----CCCSSSCCC------------------------------------------------------------------
T ss_pred             -----eecccccccCc-------------------------------------------------c----------cccc
Confidence                 78888761000                                                 0          0000


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc-e
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT-E  240 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~-~  240 (513)
                      ......|+.+|+|||++.......               ........++.++|||||||++|||++ |..||...... .
T Consensus       165 ~~~~~~gt~~y~aPE~~~~~~~~~---------------~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~  228 (343)
T 3dbq_A          165 VKDSQVGTVNYMPPEAIKDMSSSR---------------ENGKSKSKISPKSDVWSLGCILYYMTY-GKTPFQQIINQIS  228 (343)
T ss_dssp             -----CCCCSSCCHHHHHHCC--------------------------CCHHHHHHHHHHHHHHHHH-SSCTTTTCCSHHH
T ss_pred             cCCCCcCCcCcCCHHHHhhccccc---------------cccccccCCCchhhHHHHHHHHHHHHh-CCCcchhhhhHHH
Confidence            001224677777777653211000               000012467899999999999999999 99999764331 1


Q ss_pred             e-ccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 V-VDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~-~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      . ...+........|            .||..++..|+++.++|.+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          229 KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            1 1111112222112            4789999999999999986

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.78  E-value=2.8e-20  Score=187.12  Aligned_cols=165  Identities=25%  Similarity=0.442  Sum_probs=120.0

Q ss_pred             CCCCcHHHHHHhcCCC-------------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHENT-------------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~-------------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.+++.+....             ..+++..+..++.|++.||+|||+++|+||||||+||+++.++        
T Consensus       123 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--------  194 (334)
T 2pvf_A          123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN--------  194 (334)
T ss_dssp             CTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC--------
T ss_pred             CCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCC--------
Confidence            4689999999986421             1368889999999999999999999999999999996665543        


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                         ..++            .|||+++..                                                    
T Consensus       195 ---~~kL------------~Dfg~~~~~----------------------------------------------------  207 (334)
T 2pvf_A          195 ---VMKI------------ADFGLARDI----------------------------------------------------  207 (334)
T ss_dssp             ---CEEE------------CCCTTCEEC----------------------------------------------------
T ss_pred             ---CEEE------------ccccccccc----------------------------------------------------
Confidence               3344            788876500                                                    


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                            ... .........                          .+++.++|||++....++.++||||+||++|||++
T Consensus       208 ------~~~-~~~~~~~~~--------------------------~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt  254 (334)
T 2pvf_A          208 ------NNI-DYYKKTTNG--------------------------RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT  254 (334)
T ss_dssp             ------TTT-SSEECCSCC--------------------------CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred             ------ccc-ccccccCCC--------------------------CcccceeChHHhcCCCcChHHHHHHHHHHHHHHHh
Confidence                  000 000000001                          12234556666666788999999999999999998


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .|..||...+..++...+..+.+.+.+            .||..++..||++.+++..
T Consensus       255 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          255 LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             TSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            899999988877777777666554443            4788999999999998764

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.78  E-value=8.5e-21  Score=186.43  Aligned_cols=165  Identities=18%  Similarity=0.247  Sum_probs=112.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..+..++.|++.||.|||+++|+||||||+|||++.++...+   ......++      
T Consensus        94 ~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~---~~~~~~kl------  162 (289)
T 4fvq_A           94 VKFGSLDTYLKKNKNC--INILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKT---GNPPFIKL------  162 (289)
T ss_dssp             CTTCBHHHHHHHTGGG--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGG---TBCCEEEE------
T ss_pred             CCCCCHHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccc---cccceeee------
Confidence            4689999999987543  588899999999999999999999999999999987776653111   01111233      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                                
T Consensus       163 ------~Dfg~~~~~~----------------------------------------------------------------  172 (289)
T 4fvq_A          163 ------SDPGISITVL----------------------------------------------------------------  172 (289)
T ss_dssp             ------CCCCSCTTTS----------------------------------------------------------------
T ss_pred             ------ccCccccccc----------------------------------------------------------------
Confidence                  6666654100                                                                


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc-ccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY-TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                       ......|+.+                          ++|||++.. ..++.++||||+||++|||++.+.+||...+..
T Consensus       173 -~~~~~~~~~~--------------------------y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~  225 (289)
T 4fvq_A          173 -PKDILQERIP--------------------------WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ  225 (289)
T ss_dssp             -CHHHHHHTTT--------------------------TSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred             -CccccCCcCc--------------------------ccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH
Confidence             0000112333                          455555555 568999999999999999999556666665554


Q ss_pred             eeccccccccccCCC----------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ............+.+          .||..++..||++.+++..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          226 RKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            444433332222222          5799999999999998875

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.78  E-value=4.5e-20  Score=180.26  Aligned_cols=160  Identities=20%  Similarity=0.322  Sum_probs=99.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.....  ++++..++.++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        93 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~-----------~~kl------  153 (278)
T 3cok_A           93 CHNGEMNRYLKNRVK--PFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNM-----------NIKI------  153 (278)
T ss_dssp             CTTEEHHHHHHTCSS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTC-----------CEEE------
T ss_pred             CCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC-----------CEEE------
Confidence            468999999987644  368899999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++.....                                                          ...  
T Consensus       154 ------~dfg~~~~~~~----------------------------------------------------------~~~--  167 (278)
T 3cok_A          154 ------ADFGLATQLKM----------------------------------------------------------PHE--  167 (278)
T ss_dssp             ------CCCTTCEECC----------------------------------------------------------------
T ss_pred             ------EeecceeeccC----------------------------------------------------------CCC--
Confidence                  77777651000                                                          000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|||                          ++....++.++|+||+||++|||++ |..||......+
T Consensus       168 -~~~~~~~~~~y~aPE--------------------------~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~  219 (278)
T 3cok_A          168 -KHYTLCGTPNYISPE--------------------------IATRSAHGLESDVWSLGCMFYTLLI-GRPPFDTDTVKN  219 (278)
T ss_dssp             ---------------------------------------------------CTHHHHHHHHHHHHHH-SSCSSCCCSCC-
T ss_pred             -cceeccCCCCcCCcc--------------------------hhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCChhHHH
Confidence             000112444555554                          4445567899999999999999999 999998776655


Q ss_pred             ecccccccc-ccCC--C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGI-ILEK--P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~-~~~~--p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.... ..+.  +        .||..++..|+++.++|.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  263 (278)
T 3cok_A          220 TLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH  263 (278)
T ss_dssp             ----CCSSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHHHhhcccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence            554443221 1111  1        4788999999999999986

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.78  E-value=2.6e-20  Score=185.51  Aligned_cols=56  Identities=20%  Similarity=0.211  Sum_probs=49.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||+|||+++|+||||||+||+++.++
T Consensus        93 ~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~  148 (316)
T 2ac3_A           93 MRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPN  148 (316)
T ss_dssp             CTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSS
T ss_pred             CCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCC
Confidence            46899999999865   468899999999999999999999999999999997665543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.78  E-value=1.5e-20  Score=188.73  Aligned_cols=163  Identities=17%  Similarity=0.220  Sum_probs=115.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++...... .+++..++.++.|++.||+|||++||+||||||+||+++...        .....++      
T Consensus       111 ~~~~~L~~~~~~~~~~-~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~--------~~~~~kL------  175 (327)
T 3lm5_A          111 AAGGEIFSLCLPELAE-MVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIY--------PLGDIKI------  175 (327)
T ss_dssp             CTTEEGGGGGSSCC-C-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBT--------TBCCEEE------
T ss_pred             cCCCcHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCC--------CCCcEEE------
Confidence            4689999998765333 478999999999999999999999999999999996655421        1223344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          ....   
T Consensus       176 ------~Dfg~a~~~----------------------------------------------------------~~~~---  188 (327)
T 3lm5_A          176 ------VDFGMSRKI----------------------------------------------------------GHAC---  188 (327)
T ss_dssp             ------CCGGGCEEC-----------------------------------------------------------------
T ss_pred             ------eeCcccccc----------------------------------------------------------CCcc---
Confidence                  788876510                                                          0000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......                          +++.+++||++....++.++|+||+||++|||++ |..||...+..+
T Consensus       189 -~~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~  240 (327)
T 3lm5_A          189 -ELREIM--------------------------GTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT-HTSPFVGEDNQE  240 (327)
T ss_dssp             ------C--------------------------CCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -cccccc--------------------------CCcCccCCeeecCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchH
Confidence             000111                          3444556666777788999999999999999999 999998877766


Q ss_pred             eccccccccccCCC---------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP---------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p---------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+........+               .||..++..||+++++|.+
T Consensus       241 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          241 TYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             HHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence            65555432211111               4788899999999999876

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.78  E-value=3.6e-20  Score=185.74  Aligned_cols=55  Identities=15%  Similarity=0.216  Sum_probs=48.8

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +|+|.+++.+.... ++++..++.++.|++.||+|||+++|+||||||+|||++.+
T Consensus       100 ~~~l~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~  154 (339)
T 1z57_A          100 GLSTYDFIKENGFL-PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQS  154 (339)
T ss_dssp             CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCC
T ss_pred             CCCHHHHHHhcCCC-CCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEecc
Confidence            78999999887543 47889999999999999999999999999999999776654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.78  E-value=1.9e-20  Score=186.96  Aligned_cols=165  Identities=25%  Similarity=0.442  Sum_probs=119.3

Q ss_pred             CCCCcHHHHHHhcCC-------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCc
Q psy17476          1 MRHGSLLNYLRRHEN-------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPK   73 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~   73 (513)
                      +++|+|.+++.+...       ..++++..+..++.|++.||+|||++||+||||||+||+++.++           ..+
T Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~-----------~~k  178 (322)
T 1p4o_A          110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-----------TVK  178 (322)
T ss_dssp             CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC-----------CEE
T ss_pred             CCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCC-----------eEE
Confidence            468999999987431       12458889999999999999999999999999999996665543           334


Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEe
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVM  153 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  153 (513)
                      +            .|||+++..                                                          
T Consensus       179 l------------~Dfg~~~~~----------------------------------------------------------  188 (322)
T 1p4o_A          179 I------------GDFGMTRDI----------------------------------------------------------  188 (322)
T ss_dssp             E------------CCTTCCCGG----------------------------------------------------------
T ss_pred             E------------CcCcccccc----------------------------------------------------------
Confidence            4            778776510                                                          


Q ss_pred             ecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCC
Q psy17476        154 DDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPY  233 (513)
Q Consensus       154 ~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf  233 (513)
                                    .....     .....        ...+++.+++||++....++.++||||+||++|||++.|..||
T Consensus       189 --------------~~~~~-----~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~  241 (322)
T 1p4o_A          189 --------------YETDY-----YRKGG--------KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY  241 (322)
T ss_dssp             --------------GGGGC-----EEGGG--------SSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTT
T ss_pred             --------------ccccc-----ccccc--------CCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcc
Confidence                          00000     00000        0012334566777777788999999999999999998789999


Q ss_pred             CCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        234 GRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ...+..++...+..+...+.+            .||..++..||++.+++..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          242 QGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             TTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            988877777776655443333            4788999999999998875

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.78  E-value=4.4e-20  Score=181.05  Aligned_cols=157  Identities=18%  Similarity=0.248  Sum_probs=115.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        96 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----------~~kl------  155 (284)
T 2vgo_A           96 APRGELYKELQKHG---RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG-----------ELKI------  155 (284)
T ss_dssp             CTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTC-----------CEEE------
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCC-----------CEEE------
Confidence            36789999999875   368899999999999999999999999999999996665554           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++...                                                          ...    
T Consensus       156 ------~Dfg~~~~~----------------------------------------------------------~~~----  167 (284)
T 2vgo_A          156 ------ADFGWSVHA----------------------------------------------------------PSL----  167 (284)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------SSS----
T ss_pred             ------ecccccccC----------------------------------------------------------ccc----
Confidence                  677765400                                                          000    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......                          +++.+++||++....++.++|+||+|+++|||++ |..||...+..+
T Consensus       168 -~~~~~~--------------------------~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~  219 (284)
T 2vgo_A          168 -RRRTMC--------------------------GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV-GMPPFDSPSHTE  219 (284)
T ss_dssp             -CBCCCC--------------------------SCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHH-SSCTTCCSSHHH
T ss_pred             -cccccc--------------------------CCCCcCCHHHhccCCCCcccchhhHHHHHHHHHH-CCCCCCCCCHhH
Confidence             000011                          3344556666677788999999999999999999 999998777666


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.......++           .||..++..|+++.+++.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          220 THRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             HHHHHHTTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred             HHHHHhccccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence            65555433221111           4788899999999999876

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.78  E-value=2.5e-20  Score=186.61  Aligned_cols=54  Identities=24%  Similarity=0.337  Sum_probs=47.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhc----------ceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERH----------NYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~----------~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.++++++.    +++..+..++.|++.||+|||++          +|+||||||+|||++.+
T Consensus       104 ~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~  167 (322)
T 3soc_A          104 HEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN  167 (322)
T ss_dssp             CTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTT
T ss_pred             CCCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCC
Confidence            46899999998753    68899999999999999999999          99999999999655544

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.78  E-value=2.3e-18  Score=156.74  Aligned_cols=161  Identities=30%  Similarity=0.619  Sum_probs=126.1

Q ss_pred             CCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecC-CCccccccCCceeeccccccccccCCCCchhh
Q psy17476        120 DQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK-NGSVGYIPSNYVKEKELLGLQKYDDVNGLTLE  198 (513)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~  198 (513)
                      ..+.....++++|||.+...++|+|++||++.|++. +..||.++.. .|..|++|.+|+.....+              
T Consensus         7 ~~~~~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~~~~~~~g~~G~vP~~yv~~~~~l--------------   71 (175)
T 4d8k_A            7 ASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQ-SGEWWKAQSLTTGQEGFIPFNFVAKANSL--------------   71 (175)
T ss_dssp             ------CEEEESSCBCCCSSSBCCBCTTCEEEEEEC-CSSEEEEEETTTCCEEEEEGGGEEETTCS--------------
T ss_pred             CCCCCCcEEEEccCcCCcCCcccccccCCEEEEEcc-CCCEEEEEECCCCceeeeccccccccccc--------------
Confidence            344456789999999999999999999999999998 5799999884 789999999998643210              


Q ss_pred             hhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceeccccccccccCCCCCcCCCCCCHHHHHHHHcCC-CCC
Q psy17476        199 LIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQE-DKE  277 (513)
Q Consensus       199 ~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p~~w~~~~~~R~~aeeLL~~~-~~~  277 (513)
                                                                            ....|+++.++|..|+++|... .++
T Consensus        72 ------------------------------------------------------~~~~w~~g~isr~~ae~lL~~~~~~~   97 (175)
T 4d8k_A           72 ------------------------------------------------------EPEPWFFKNLSRKDAERQLLAPGNTH   97 (175)
T ss_dssp             ------------------------------------------------------TTCTTBCSSCCHHHHHHHHHSTTCCT
T ss_pred             ------------------------------------------------------cccceecCcccHHHHHHHHhcCCCCC
Confidence                                                                  1134999999999999999764 479


Q ss_pred             ceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhccCCcEEEEecCCCCcEEEEEEee
Q psy17476        278 GCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTK  356 (513)
Q Consensus       278 g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~~g~~LvR~s~~~~~~~lsv~~~  356 (513)
                      |+||||+|++ .+.|+||++.....                                                       
T Consensus        98 G~FLVR~S~~~~g~y~LSv~~~~~~-------------------------------------------------------  122 (175)
T 4d8k_A           98 GSFLIRESESTAGSFSLSVRDFDQN-------------------------------------------------------  122 (175)
T ss_dssp             TCEEEEECSSSTTCEEEEEEEECTT-------------------------------------------------------
T ss_pred             CEEEEEECCCCCCeEEEEEEeCccc-------------------------------------------------------
Confidence            9999999964 78899987642100                                                       


Q ss_pred             eCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccC
Q psy17476        357 VPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       357 ~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                       ....++|++|....+|.|++.+...|.++.+||+||..+.+++..++.
T Consensus       123 -~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~~gl~~~L~  170 (175)
T 4d8k_A          123 -QGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLS  170 (175)
T ss_dssp             -SCEEEEEEEEEECSSSCEESSTTSEESSHHHHHHHHHHCCTTSSSCCC
T ss_pred             -CCCceEEEEEEECCCCCEEECCCCccCCHHHHHHHHhhCCCCCcccCC
Confidence             024567888877677778887778999999999999999988888774

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.78  E-value=3.9e-20  Score=182.68  Aligned_cols=55  Identities=24%  Similarity=0.302  Sum_probs=47.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHH--------hcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLE--------RHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH--------~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++++.    .+++..+..++.|++.||+|||        +++|+||||||+|||++.++
T Consensus        88 ~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~  150 (301)
T 3q4u_A           88 HEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG  150 (301)
T ss_dssp             CTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTS
T ss_pred             ccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCC
Confidence            4689999999653    3688999999999999999999        99999999999996655543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.78  E-value=5e-20  Score=179.85  Aligned_cols=160  Identities=19%  Similarity=0.260  Sum_probs=114.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++....   .+++..+..++.|++.||+|||+++|+||||||+||++..+        +.....++      
T Consensus        88 ~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~--------~~~~~~~l------  150 (277)
T 3f3z_A           88 CTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD--------SPDSPLKL------  150 (277)
T ss_dssp             CCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS--------STTCCEEE------
T ss_pred             cCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecC--------CCCCcEEE------
Confidence            46899999998865   36899999999999999999999999999999999665221        12223344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++..                                                          .....   
T Consensus       151 ------~Dfg~~~~----------------------------------------------------------~~~~~---  163 (277)
T 3f3z_A          151 ------IDFGLAAR----------------------------------------------------------FKPGK---  163 (277)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCTTS---
T ss_pred             ------Eeccccee----------------------------------------------------------ccCcc---
Confidence                  77777640                                                          00000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|                          ||++.. .++.++|+||+|+++|||++ |..||...+..+
T Consensus       164 -~~~~~~~t~~y~a--------------------------PE~~~~-~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~  214 (277)
T 3f3z_A          164 -MMRTKVGTPYYVS--------------------------PQVLEG-LYGPECDEWSAGVMMYVLLC-GYPPFSAPTDSE  214 (277)
T ss_dssp             -CBCCCCSCTTTCC--------------------------HHHHTT-CBCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -chhccCCCCCccC--------------------------hHHhcc-cCCchhhehhHHHHHHHHHH-CCCCCCCCCHHH
Confidence             0011124444444                          554443 47999999999999999999 999999888777


Q ss_pred             eccccccccccCCC---------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP---------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p---------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+....++               .||..++..|+++.++|.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          215 VMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH  262 (277)
T ss_dssp             HHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             HHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            77666554332221               4788889999999998875

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.78  E-value=4.3e-20  Score=195.60  Aligned_cols=160  Identities=24%  Similarity=0.372  Sum_probs=117.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..+++|++.||+|||++||+||||||+|||++.++        .....++      
T Consensus       103 ~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~--------~~~~~kl------  165 (486)
T 3mwu_A          103 YTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE--------KDCDIKI------  165 (486)
T ss_dssp             CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSS--------TTCCEEE------
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC--------CCCCEEE------
Confidence            46899999998865   468999999999999999999999999999999996654322        1223344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                 ..+.            
T Consensus       166 ------~Dfg~a~~~-------------------------------------------------~~~~------------  178 (486)
T 3mwu_A          166 ------IDFGLSTCF-------------------------------------------------QQNT------------  178 (486)
T ss_dssp             ------CSCSCTTTB-------------------------------------------------CCC-------------
T ss_pred             ------EECCcCeEC-------------------------------------------------CCCC------------
Confidence                  788877510                                                 0000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|||.                          +.. .|+.++||||+||++|+|++ |..||...+..+
T Consensus       179 -~~~~~~gt~~y~aPE~--------------------------~~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~  229 (486)
T 3mwu_A          179 -KMKDRIGTAYYIAPEV--------------------------LRG-TYDEKCDVWSAGVILYILLS-GTPPFYGKNEYD  229 (486)
T ss_dssp             ----CCTTGGGGCCGGG--------------------------GGS-CCCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -ccCCCcCCCCCCCHHH--------------------------hCC-CCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence             0011235555555554                          433 57899999999999999999 999999888888


Q ss_pred             eccccccccccCC-C--------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK-P--------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~-p--------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++..+..+..... |              .||..++..|+++.++|.+
T Consensus       230 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          230 ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             HHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             HHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            8777765533221 1              4688899999999999986

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.78  E-value=8.1e-20  Score=193.89  Aligned_cols=160  Identities=24%  Similarity=0.401  Sum_probs=117.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..+++||+.||+|||++||+||||||+|||++.++.        ....|+      
T Consensus       118 ~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~--------~~~~kl------  180 (494)
T 3lij_A          118 YKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEK--------DALIKI------  180 (494)
T ss_dssp             CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSST--------TCCEEE------
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCC--------CCcEEE------
Confidence            46899999998865   4688999999999999999999999999999999966654321        122344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-                                                          .....   
T Consensus       181 ------~DfG~a~~----------------------------------------------------------~~~~~---  193 (494)
T 3lij_A          181 ------VDFGLSAV----------------------------------------------------------FENQK---  193 (494)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CBTTB---
T ss_pred             ------EECCCCeE----------------------------------------------------------CCCCc---
Confidence                  78887650                                                          00000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|                          +|||++. ..|+.++||||+||++|+|++ |..||...+..+
T Consensus       194 -~~~~~~gt~~y--------------------------~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~  244 (494)
T 3lij_A          194 -KMKERLGTAYY--------------------------IAPEVLR-KKYDEKCDVWSIGVILFILLA-GYPPFGGQTDQE  244 (494)
T ss_dssp             -CBCCCCSCTTT--------------------------CCHHHHT-TCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -cccccCCCcCe--------------------------eCHHHHc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence             00111244444                          4555544 368999999999999999999 999999988888


Q ss_pred             eccccccccccCCC---------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP---------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p---------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.....+               .||..++..|+++.++|.+
T Consensus       245 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          245 ILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             HHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             HHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence            88777655433221               4678899999999999876

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.78  E-value=3.6e-20  Score=188.63  Aligned_cols=160  Identities=18%  Similarity=0.247  Sum_probs=105.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||+|||++||+||||||+|||++.++.         ...|+      
T Consensus        98 ~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~---------~~~kl------  159 (361)
T 3uc3_A           98 ASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPA---------PRLKI------  159 (361)
T ss_dssp             CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSS---------CCEEE------
T ss_pred             CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCC---------ceEEE------
Confidence            46899999998865   3689999999999999999999999999999999966554431         12344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.....                                                         .    
T Consensus       160 ------~Dfg~a~~~~~~---------------------------------------------------------~----  172 (361)
T 3uc3_A          160 ------CDFGYSKSSVLH---------------------------------------------------------S----  172 (361)
T ss_dssp             ------CCCCCC--------------------------------------------------------------------
T ss_pred             ------eecCcccccccc---------------------------------------------------------C----
Confidence                  788876510000                                                         0    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccccccccc-CccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSK-SDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                       ......|+..|                          +|||++....++.+ +||||+||++|||++ |..||......
T Consensus       173 -~~~~~~gt~~y--------------------------~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~  224 (361)
T 3uc3_A          173 -QPKSTVGTPAY--------------------------IAPEVLLRQEYDGKIADVWSCGVTLYVMLV-GAYPFEDPEEP  224 (361)
T ss_dssp             ---------CTT--------------------------SCHHHHHCSSCCHHHHHHHHHHHHHHHHHH-SSCSCC----C
T ss_pred             -CCCCCcCCCCc--------------------------CChhhhcCCCCCCCeeeeehhHHHHHHHHh-CCCCCCCCccH
Confidence             00111244444                          45555555566544 899999999999999 99999876543


Q ss_pred             eecc----ccccc-cccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVD----RVQRG-IILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~----~i~~~-~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....    .+... ...+.+            +||..++..|+++.+++.+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          225 RDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             CCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            3322    22111 111111            4788999999999999986

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.78  E-value=5.1e-20  Score=180.26  Aligned_cols=162  Identities=16%  Similarity=0.234  Sum_probs=115.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+||+++.++.       .....++      
T Consensus        90 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-------~~~~~kl------  153 (283)
T 3bhy_A           90 VSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNV-------PNPRIKL------  153 (283)
T ss_dssp             CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSS-------SSCCEEE------
T ss_pred             cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCC-------CCCceEE------
Confidence            46899999998764   4689999999999999999999999999999999966655431       0112344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++...                                                          ....   
T Consensus       154 ------~dfg~~~~~----------------------------------------------------------~~~~---  166 (283)
T 3bhy_A          154 ------IDFGIAHKI----------------------------------------------------------EAGN---  166 (283)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------C------
T ss_pred             ------Eecccceec----------------------------------------------------------cCCC---
Confidence                  677766400                                                          0000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......                          +++.+++||++....++.++|+||+|+++|+|++ |..||...+..+
T Consensus       167 -~~~~~~--------------------------~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~  218 (283)
T 3bhy_A          167 -EFKNIF--------------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGETKQE  218 (283)
T ss_dssp             ------C--------------------------CCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCTTCCSSHHH
T ss_pred             -cccccC--------------------------CCcCccCcceecCCCCCcchhhhhHHHHHHHHHH-CCCCCCCcchHH
Confidence             000011                          3344556666677788999999999999999999 999998877666


Q ss_pred             eccccccccccC-------CC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILE-------KP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~-------~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.......       .+        .||..++..||++.++|.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  266 (283)
T 3bhy_A          219 TLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH  266 (283)
T ss_dssp             HHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred             HHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence            655544322111       11        6899999999999999876

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.78  E-value=4.3e-20  Score=183.15  Aligned_cols=163  Identities=17%  Similarity=0.277  Sum_probs=110.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.......++++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       112 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~-----------~~kl------  174 (307)
T 2nru_A          112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF-----------TAKI------  174 (307)
T ss_dssp             CTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC-----------CEEE------
T ss_pred             cCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCC-----------cEEE------
Confidence            46899999998755444578999999999999999999999999999999996655443           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                          ..... .
T Consensus       175 ------~Dfg~~~~~----------------------------------------------------------~~~~~-~  189 (307)
T 2nru_A          175 ------SDFGLARAS----------------------------------------------------------EKFAQ-T  189 (307)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------CSCSS-C
T ss_pred             ------eeccccccc----------------------------------------------------------ccccc-c
Confidence                  778776500                                                          00000 0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+.+|                          ++||++.. .++.++|+|||||++|+|++ |..||......+
T Consensus       190 ~~~~~~~g~~~y--------------------------~aPE~~~~-~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~  241 (307)
T 2nru_A          190 VMTSRIVGTTAY--------------------------MAPEALRG-EITPKSDIYSFGVVLLEIIT-GLPAVDEHREPQ  241 (307)
T ss_dssp             EECSSCCSCGGG--------------------------CCHHHHTT-EECTHHHHHHHHHHHHHHHH-CCCSBCTTBSSS
T ss_pred             ccccccCCCcCc--------------------------CChHHhcC-CCCccchhHHHHHHHHHHHH-CCCCcccCcchH
Confidence            000111244444                          44554443 47889999999999999999 999998766554


Q ss_pred             eccccccc--------------cccCC------------CCCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRG--------------IILEK------------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~--------------~~~~~------------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.+.              .....            ..||..++..||++.+++..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          242 LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             BTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            44333211              00001            15788999999999888753

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.78  E-value=2.2e-20  Score=187.54  Aligned_cols=165  Identities=26%  Similarity=0.439  Sum_probs=114.6

Q ss_pred             CCCCcHHHHHHhcCC-----------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCcc
Q psy17476          1 MRHGSLLNYLRRHEN-----------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQM   69 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~   69 (513)
                      +++|+|.+++.+...           ...+++..+..++.|++.||+|||+++|+||||||+||+++.++          
T Consensus       132 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~----------  201 (333)
T 2i1m_A          132 CCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH----------  201 (333)
T ss_dssp             CTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGG----------
T ss_pred             CCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCC----------
Confidence            468999999987531           11468889999999999999999999999999999997665554          


Q ss_pred             CCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCE
Q psy17476         70 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAE  149 (513)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  149 (513)
                       ..++            .|||+++...                                                     
T Consensus       202 -~~kl------------~Dfg~~~~~~-----------------------------------------------------  215 (333)
T 2i1m_A          202 -VAKI------------GDFGLARDIM-----------------------------------------------------  215 (333)
T ss_dssp             -EEEB------------CCCGGGCCGG-----------------------------------------------------
T ss_pred             -eEEE------------Cccccccccc-----------------------------------------------------
Confidence             2344            7888775100                                                     


Q ss_pred             EEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecC
Q psy17476        150 YEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCG  229 (513)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g  229 (513)
                           .            ........               ...+++.++|||++....++.++|||||||++|||+|.|
T Consensus       216 -----~------------~~~~~~~~---------------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g  263 (333)
T 2i1m_A          216 -----N------------DSNYIVKG---------------NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG  263 (333)
T ss_dssp             -----G------------CTTSEECS---------------SCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred             -----c------------ccceeecC---------------CCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCC
Confidence                 0            00000000               001233456677777778899999999999999999879


Q ss_pred             CCCCCCCCcceec-cccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        230 KMPYGRLKNTEVV-DRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       230 ~~pf~~~~~~~~~-~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..||......+.. ..+..+...+.|            .||..++..||++.+++..
T Consensus       264 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          264 LNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             CCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            9999876554333 333333333322            5788899999999888753

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.78  E-value=3.4e-20  Score=184.38  Aligned_cols=165  Identities=25%  Similarity=0.442  Sum_probs=115.7

Q ss_pred             CCCCcHHHHHHhcCCC-------------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHENT-------------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~-------------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.+++......             ..+++..+..++.|++.||+|||+++|+||||||+||+++.++        
T Consensus       114 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~--------  185 (316)
T 2xir_A          114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN--------  185 (316)
T ss_dssp             CTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--------
T ss_pred             CCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCC--------
Confidence            4689999999986531             1268899999999999999999999999999999996665543        


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                         ..++            .|||+++-..                                                   
T Consensus       186 ---~~kl------------~Dfg~~~~~~---------------------------------------------------  199 (316)
T 2xir_A          186 ---VVKI------------CDFGLARDIY---------------------------------------------------  199 (316)
T ss_dssp             ---CEEE------------CCCGGGSCTT---------------------------------------------------
T ss_pred             ---CEEE------------CCCccccccc---------------------------------------------------
Confidence               3344            7888775100                                                   


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                                          ..     +.......         ..+++.++|||++....++.++|+||+||++|||+|
T Consensus       200 --------------------~~-----~~~~~~~~---------~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t  245 (316)
T 2xir_A          200 --------------------KD-----PDYVRKGD---------ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS  245 (316)
T ss_dssp             --------------------TC-----TTSEEETT---------EEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             --------------------cC-----ccceeccC---------CCcceeecCchhhccccccchhHHHHHHHHHHHHHh
Confidence                                00     00000000         012334566777777788999999999999999998


Q ss_pred             cCCCCCCCCCc-ceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKN-TEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~-~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .|..||..... ..+...+..+.+.+.+            .||..++..||++.+++..
T Consensus       246 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          246 LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             TSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            79999987654 3334444444443333            4788889999999888764

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.78  E-value=4.4e-20  Score=186.45  Aligned_cols=55  Identities=13%  Similarity=0.218  Sum_probs=47.8

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +|+|.+++.+.... ++++..++.++.||+.||+|||+++|+||||||+|||+..+
T Consensus       105 ~~~l~~~l~~~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~  159 (355)
T 2eu9_A          105 GKNTFEFLKENNFQ-PYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNS  159 (355)
T ss_dssp             CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCC
T ss_pred             CCChHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecc
Confidence            68899998886533 47899999999999999999999999999999999777544

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.78  E-value=4e-20  Score=183.64  Aligned_cols=165  Identities=25%  Similarity=0.458  Sum_probs=114.9

Q ss_pred             CCCCcHHHHHHhcCCC---------------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcccccccc
Q psy17476          1 MRHGSLLNYLRRHENT---------------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILW   65 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~---------------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l   65 (513)
                      +++|+|.+++.+....               ..+++..+..++.|++.||+|||+++|+||||||+||+++.++      
T Consensus       109 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~------  182 (313)
T 1t46_A          109 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR------  182 (313)
T ss_dssp             CTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTT------
T ss_pred             CCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCC------
Confidence            4689999999986532               1378999999999999999999999999999999997665543      


Q ss_pred             CCccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCC
Q psy17476         66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLE  145 (513)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  145 (513)
                           ..++            .|||+++...                                                 
T Consensus       183 -----~~kl------------~Dfg~~~~~~-------------------------------------------------  196 (313)
T 1t46_A          183 -----ITKI------------CDFGLARDIK-------------------------------------------------  196 (313)
T ss_dssp             -----EEEE------------CCCGGGSCTT-------------------------------------------------
T ss_pred             -----CEEE------------cccccccccc-------------------------------------------------
Confidence                 2344            7787765100                                                 


Q ss_pred             CCCEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeee
Q psy17476        146 KGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEV  225 (513)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el  225 (513)
                      .         . .........                          .+++.++|||++....++.++||||+||++|||
T Consensus       197 ~---------~-~~~~~~~~~--------------------------~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  240 (313)
T 1t46_A          197 N---------D-SNYVVKGNA--------------------------RLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL  240 (313)
T ss_dssp             S---------C-TTSEECSSS--------------------------EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             c---------c-ccceeccCC--------------------------CCcceeeChHHhcCCCCChHHHHHHHHHHHHHH
Confidence            0         0 000000000                          122345667777777889999999999999999


Q ss_pred             eecCCCCCCCCCccee-ccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        226 FTCGKMPYGRLKNTEV-VDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       226 ~t~g~~pf~~~~~~~~-~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++.|..||......+. ...+..+.+...+            .||..++..||++.+++..
T Consensus       241 lt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          241 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             HTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            9879999987665333 3333333333222            4788899999999888764

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.78  E-value=2.7e-20  Score=185.14  Aligned_cols=160  Identities=24%  Similarity=0.415  Sum_probs=110.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh---cceeccccCcccccccCccccccccCCccCCCceEEE
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER---HNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVA   77 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~---~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~   77 (513)
                      +++|+|.+++.+......+++..+..++.|++.||+|||+   ++|+||||||+||+++.++          ...|+   
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~----------~~~kl---  147 (307)
T 2eva_A           81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG----------TVLKI---  147 (307)
T ss_dssp             CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTT----------TEEEE---
T ss_pred             CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCC----------CEEEE---
Confidence            4689999999986543346788999999999999999999   8999999999996655443          12344   


Q ss_pred             eccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCC
Q psy17476         78 LYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ  157 (513)
Q Consensus        78 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  157 (513)
                               .|||++....                                                          .  
T Consensus       148 ---------~Dfg~~~~~~----------------------------------------------------------~--  158 (307)
T 2eva_A          148 ---------CDFGTACDIQ----------------------------------------------------------T--  158 (307)
T ss_dssp             ---------CCCCC------------------------------------------------------------------
T ss_pred             ---------cccccccccc----------------------------------------------------------c--
Confidence                     7887764100                                                          0  


Q ss_pred             ccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC
Q psy17476        158 EHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK  237 (513)
Q Consensus       158 ~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~  237 (513)
                          ......|+..|                          +|||++....++.++|||||||++|||++ |..||....
T Consensus       159 ----~~~~~~gt~~y--------------------------~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~  207 (307)
T 2eva_A          159 ----HMTNNKGSAAW--------------------------MAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRKPFDEIG  207 (307)
T ss_dssp             ----------CCTTS--------------------------SCHHHHTCCCCCTHHHHHHHHHHHHHHHH-TCCTTTTTC
T ss_pred             ----ccccCCCCCce--------------------------EChhhhCCCCCCcHHHHHHHHHHHHHHHH-CCCCchhhC
Confidence                00011134444                          45555666678999999999999999999 999997544


Q ss_pred             cc--eeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 NT--EVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ~~--~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..  .+...+..+.+++.+            +||..++..||++.+++..
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          208 GPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             SSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            32  223333333333222            4799999999999998764

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.77  E-value=3.3e-20  Score=183.93  Aligned_cols=160  Identities=18%  Similarity=0.273  Sum_probs=114.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||++||+||||||+||++..+        +.....++      
T Consensus        88 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~--------~~~~~~kl------  150 (304)
T 2jam_A           88 VSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTP--------EENSKIMI------  150 (304)
T ss_dssp             CCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSS--------STTCCEEB------
T ss_pred             CCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecC--------CCCCCEEE------
Confidence            46899999998865   46889999999999999999999999999999999665221        22223344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-..                                                          ..    
T Consensus       151 ------~Dfg~~~~~~----------------------------------------------------------~~----  162 (304)
T 2jam_A          151 ------TDFGLSKMEQ----------------------------------------------------------NG----  162 (304)
T ss_dssp             ------CSCSTTCCCC----------------------------------------------------------CB----
T ss_pred             ------ccCCcceecC----------------------------------------------------------CC----
Confidence                  7777765100                                                          00    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|||                          ++....++.++|+||+||++|||++ |..||...+..+
T Consensus       163 -~~~~~~~~~~y~aPE--------------------------~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~  214 (304)
T 2jam_A          163 -IMSTACGTPGYVAPE--------------------------VLAQKPYSKAVDCWSIGVITYILLC-GYPPFYEETESK  214 (304)
T ss_dssp             -TTHHHHSCCCBCCTT--------------------------TBSSCSCCHHHHHHHHHHHHHHHHH-SSCTTTTSCHHH
T ss_pred             -ccccccCCCCccChH--------------------------HhccCCCCchhhHHHHHHHHHHHHH-CCCCCCCCCHHH
Confidence             000112445555555                          4455578899999999999999999 999998877777


Q ss_pred             eccccccccccCCC---------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP---------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p---------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++......               .||..++..|+++.++|.+
T Consensus       215 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          215 LFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             HHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            76666554322111               4678889999999999876

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.77  E-value=6.3e-20  Score=187.12  Aligned_cols=164  Identities=19%  Similarity=0.341  Sum_probs=115.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   .+++..+..++.||+.||.|||++||+||||||+||+++.++           ..++      
T Consensus       182 ~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~-----------~ikl------  241 (365)
T 2y7j_A          182 MRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNM-----------QIRL------  241 (365)
T ss_dssp             CTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----------CEEE------
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-----------CEEE------
Confidence            56899999998764   468999999999999999999999999999999996665554           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++..                                                          +....   
T Consensus       242 ------~DfG~~~~----------------------------------------------------------~~~~~---  254 (365)
T 2y7j_A          242 ------SDFGFSCH----------------------------------------------------------LEPGE---  254 (365)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCTTC---
T ss_pred             ------EecCcccc----------------------------------------------------------cCCCc---
Confidence                  78877640                                                          00000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+.+|+|||++.....                    -....++.++|||||||++|||++ |..||...+..+
T Consensus       255 -~~~~~~gt~~y~aPE~~~~~~~--------------------~~~~~~~~~~Di~slG~il~ell~-g~~pf~~~~~~~  312 (365)
T 2y7j_A          255 -KLRELCGTPGYLAPEILKCSMD--------------------ETHPGYGKEVDLWACGVILFTLLA-GSPPFWHRRQIL  312 (365)
T ss_dssp             -CBCCCCSCGGGCCHHHHHHTTC--------------------TTSCCBCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -ccccCCCCCCccChhhcccccc--------------------ccCcCCCchhhHHhHHHHHHHHHH-CCCCCCCCCHHH
Confidence             0011235666666665432100                    012357899999999999999999 999998777666


Q ss_pred             eccccccccccCC-------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK-------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~-------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.....       +        .||..++..|+++.++|.+
T Consensus       313 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          313 MLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             HHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            6655544322211       1        4788889999999998875

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.77  E-value=4.4e-20  Score=181.60  Aligned_cols=157  Identities=24%  Similarity=0.402  Sum_probs=111.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcc--eeccccCcccccccCccccccccCCccCCCceEEEe
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHN--YIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVAL   78 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~--iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~   78 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++  |+||||||+||+++          +.....++    
T Consensus       111 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~----------~~~~~~kl----  173 (290)
T 1t4h_A          111 MTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT----------GPTGSVKI----  173 (290)
T ss_dssp             CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES----------STTSCEEE----
T ss_pred             cCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE----------CCCCCEEE----
Confidence            46899999998865   4688899999999999999999999  99999999996554          22333455    


Q ss_pred             ccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCc
Q psy17476         79 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE  158 (513)
Q Consensus        79 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  158 (513)
                              .|||++.-.                                                          ...  
T Consensus       174 --------~Dfg~~~~~----------------------------------------------------------~~~--  185 (290)
T 1t4h_A          174 --------GDLGLATLK----------------------------------------------------------RAS--  185 (290)
T ss_dssp             --------CCTTGGGGC----------------------------------------------------------CTT--
T ss_pred             --------eeCCCcccc----------------------------------------------------------ccc--
Confidence                    778776400                                                          000  


Q ss_pred             cceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc
Q psy17476        159 HWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN  238 (513)
Q Consensus       159 ~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~  238 (513)
                         ......|+..|+|||.+                          . ..++.++|+||+||++|+|++ |..||.....
T Consensus       186 ---~~~~~~~t~~y~aPE~~--------------------------~-~~~~~~~Di~slG~~l~~l~~-g~~pf~~~~~  234 (290)
T 1t4h_A          186 ---FAKAVIGTPEFMAPEMY--------------------------E-EKYDESVDVYAFGMCMLEMAT-SEYPYSECQN  234 (290)
T ss_dssp             ---SBEESCSSCCCCCGGGG--------------------------G-TCCCTHHHHHHHHHHHHHHHH-SSCTTTTCSS
T ss_pred             ---ccccccCCcCcCCHHHH--------------------------h-ccCCCcchHHHHHHHHHHHHh-CCCCCCCcCc
Confidence               00112355666666543                          2 257899999999999999999 9999986544


Q ss_pred             -ceeccccccccccCC-C------------CCcCCCCCCHHHHHHHHcC
Q psy17476        239 -TEVVDRVQRGIILEK-P------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       239 -~~~~~~i~~~~~~~~-p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                       ..+...+..+..+.. +            .||..++..|+++.++|.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          235 AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             HHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence             333444433322211 1            5789999999999999976

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.77  E-value=3.9e-20  Score=190.14  Aligned_cols=149  Identities=17%  Similarity=0.208  Sum_probs=95.3

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .|+|.++++..    .+++..+..++.|++.||+|||++|||||||||+|||++.++           ..|+        
T Consensus        94 ~~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~-----------~~kl--------  150 (388)
T 3oz6_A           94 ETDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAEC-----------HVKV--------  150 (388)
T ss_dssp             SEEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----------CEEE--------
T ss_pred             CcCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCC-----------CEEe--------
Confidence            47999999874    368889999999999999999999999999999996665554           3355        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++...     ...                                ...........+..            
T Consensus       151 ----~DFG~a~~~~-----~~~--------------------------------~~~~~~~~~~~~~~------------  177 (388)
T 3oz6_A          151 ----ADFGLSRSFV-----NIR--------------------------------RVTNNIPLSINENT------------  177 (388)
T ss_dssp             ----CCCTTCEESS-----SCC--------------------------------CCCCCGGGCCC---------------
T ss_pred             ----cCCccccccc-----ccc--------------------------------cccccccccccccc------------
Confidence                7888876100     000                                00000000000000            


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc-ccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY-TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                             ..+....          ......-|++.++|||++.. ..|+.++||||+||++|||++ |..||.+.+..+.
T Consensus       178 -------~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~  239 (388)
T 3oz6_A          178 -------ENFDDDQ----------PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC-GKPIFPGSSTMNQ  239 (388)
T ss_dssp             -----------------------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHH
T ss_pred             -------ccccccc----------ccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCCHHHH
Confidence                   0000000          00001124556667777664 678999999999999999999 9999988776555


Q ss_pred             cccc
Q psy17476        242 VDRV  245 (513)
Q Consensus       242 ~~~i  245 (513)
                      +..+
T Consensus       240 ~~~i  243 (388)
T 3oz6_A          240 LERI  243 (388)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5444

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.77  E-value=5.7e-20  Score=180.41  Aligned_cols=164  Identities=16%  Similarity=0.360  Sum_probs=113.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcc--eeccccCcccccccCccccccccCCccCCCceEEEe
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHN--YIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVAL   78 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~--iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~   78 (513)
                      +++|+|.+++.+...  ++++..+..++.|++.||+|||+++  |+||||||+||+++.++.      +.....++    
T Consensus       103 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~------~~~~~~kl----  170 (287)
T 4f0f_A          103 VPCGDLYHRLLDKAH--PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE------NAPVCAKV----  170 (287)
T ss_dssp             CTTCBHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCT------TCSCCEEE----
T ss_pred             cCCCCHHHHHhcccC--CccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCC------CCceeEEe----
Confidence            468999999987654  3688999999999999999999999  999999999976655431      11112344    


Q ss_pred             ccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCc
Q psy17476         79 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE  158 (513)
Q Consensus        79 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  158 (513)
                              .|||+++...                                                   .          
T Consensus       171 --------~Dfg~~~~~~---------------------------------------------------~----------  181 (287)
T 4f0f_A          171 --------ADFGLSQQSV---------------------------------------------------H----------  181 (287)
T ss_dssp             --------CCCTTCBCCS---------------------------------------------------S----------
T ss_pred             --------CCCCcccccc---------------------------------------------------c----------
Confidence                    6777765100                                                   0          


Q ss_pred             cceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc
Q psy17476        159 HWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN  238 (513)
Q Consensus       159 ~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~  238 (513)
                         ......|+..|+|||.+..                        ....++.++||||+||++|||++ |..||...+.
T Consensus       182 ---~~~~~~g~~~y~aPE~~~~------------------------~~~~~~~~~Di~slG~~l~~l~~-g~~pf~~~~~  233 (287)
T 4f0f_A          182 ---SVSGLLGNFQWMAPETIGA------------------------EEESYTEKADTYSFAMILYTILT-GEGPFDEYSY  233 (287)
T ss_dssp             ---CEECCCCCCTTSCGGGSSC------------------------SSCEECHHHHHHHHHHHHHHHHH-SSCTTTTCCC
T ss_pred             ---cccccCCCccccCchhhcc------------------------CCCCcCchhhHHHHHHHHHHHHc-CCCCCccccc
Confidence               0011235666666665421                        22357889999999999999999 9999987665


Q ss_pred             cee--cccc-ccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        239 TEV--VDRV-QRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       239 ~~~--~~~i-~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+.  ...+ ..+.++..+            .||..++..||++.+++..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  283 (287)
T 4f0f_A          234 GKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE  283 (287)
T ss_dssp             CHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            443  2222 222222222            4788899999999888753

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.77  E-value=3.7e-20  Score=193.08  Aligned_cols=170  Identities=18%  Similarity=0.252  Sum_probs=108.4

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++.+....  ..+..+..++.||+.||+|||+++||||||||+|||++.++.      +....+++        
T Consensus       101 ~g~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~------~~~~~~kL--------  164 (432)
T 3p23_A          101 AATLQEYVEQKDFA--HLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNA------HGKIKAMI--------  164 (432)
T ss_dssp             SEEHHHHHHSSSCC--CCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBT------TTBCCEEE--------
T ss_pred             CCCHHHHHHhcCCC--ccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCC------CCceeEEE--------
Confidence            58999999986643  345567899999999999999999999999999976654321      11223344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++....                                                          .......
T Consensus       165 ----~DFG~a~~~~~----------------------------------------------------------~~~~~~~  182 (432)
T 3p23_A          165 ----SDFGLCKKLAV----------------------------------------------------------GRHSFSR  182 (432)
T ss_dssp             ----CCTTEEECC-------------------------------------------------------------------
T ss_pred             ----ecccceeeccC----------------------------------------------------------CCcceee
Confidence                78888761000                                                          0000000


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .....|+.+|+|||.+....                       ...++.++||||+||++|||++.|..||.........
T Consensus       183 ~~~~~gt~~y~APE~l~~~~-----------------------~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~  239 (432)
T 3p23_A          183 RSGVPGTEGWIAPEMLSEDC-----------------------KENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN  239 (432)
T ss_dssp             ---CCSCTTSCCGGGTSCC--------------------------CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH
T ss_pred             ccccCCCcCccChhhhhccc-----------------------ccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH
Confidence            11223666666666543210                       2356789999999999999998889999655443322


Q ss_pred             cccccccc--cCC------------CCCcCCCCCCHHHHHHHHcC
Q psy17476        243 DRVQRGII--LEK------------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       243 ~~i~~~~~--~~~------------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+.....  ...            ..||..++..|+++.++|.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h  284 (432)
T 3p23_A          240 ILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH  284 (432)
T ss_dssp             HHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence            22211111  001            14788899999999999976

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.77  E-value=2.1e-20  Score=184.83  Aligned_cols=161  Identities=16%  Similarity=0.215  Sum_probs=109.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++...    ++++..++.++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       120 ~~~~~l~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~-----------~~kl------  178 (298)
T 2zv2_A          120 VNQGPVMEVPTLK----PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG-----------HIKI------  178 (298)
T ss_dssp             CTTCBSCCSSCSS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCC-----------CEEE------
Confidence            3578887754332    478999999999999999999999999999999996665554           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          .....  
T Consensus       179 ------~Dfg~~~~~----------------------------------------------------------~~~~~--  192 (298)
T 2zv2_A          179 ------ADFGVSNEF----------------------------------------------------------KGSDA--  192 (298)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------SSSSC--
T ss_pred             ------ecCCCcccc----------------------------------------------------------ccccc--
Confidence                  788876500                                                          00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|||.+....                       ...++.++||||+||++|||++ |..||.......
T Consensus       193 -~~~~~~gt~~y~aPE~~~~~~-----------------------~~~~~~~~Di~slG~~l~~l~~-g~~pf~~~~~~~  247 (298)
T 2zv2_A          193 -LLSNTVGTPAFMAPESLSETR-----------------------KIFSGKALDVWAMGVTLYCFVF-GQCPFMDERIMC  247 (298)
T ss_dssp             -EECCCCSCGGGCCGGGCCTTC-----------------------CCEESHHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -cccCCcCCccccChhhhccCC-----------------------CCCCCchhhhHhHHHHHHHHHH-CCCCCCCccHHH
Confidence             001223566666666543211                       0013778999999999999999 999998776655


Q ss_pred             ecccccccc-ccCC----C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGI-ILEK----P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~-~~~~----p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.... ..+.    +        +||..++..|+++.++|.+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          248 LHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             HHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             HHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            555443321 1111    1        4788899999999998865

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.77  E-value=1.4e-20  Score=189.74  Aligned_cols=150  Identities=21%  Similarity=0.376  Sum_probs=101.4

Q ss_pred             CchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccccccCCCCcccccCCeEE
Q psy17476         19 GNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYE   98 (513)
Q Consensus        19 ~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~   98 (513)
                      +++..++.++.|++.||+|||+++|+||||||+||+++.++.         ...++            .|||+++-    
T Consensus       165 ~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~---------~~~kl------------~Dfg~a~~----  219 (345)
T 3hko_A          165 QREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS---------FEIKL------------VDFGLSKE----  219 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSS---------CCEEE------------CCCTTCEE----
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCC---------ceEEE------------eecccccc----
Confidence            467788999999999999999999999999999966654431         13345            78887650    


Q ss_pred             eeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCce
Q psy17476         99 VMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV  178 (513)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~  178 (513)
                       ...                                                    .............|+..|+     
T Consensus       220 -~~~----------------------------------------------------~~~~~~~~~~~~~gt~~y~-----  241 (345)
T 3hko_A          220 -FYK----------------------------------------------------LNNGEYYGMTTKAGTPYFV-----  241 (345)
T ss_dssp             -GGG----------------------------------------------------TTCC--------CCCGGGC-----
T ss_pred             -ccc----------------------------------------------------cCccccccccccCCCcccc-----
Confidence             000                                                    0000000001122444444     


Q ss_pred             eeccccccccccCCCCchhhhhhhhccc--ccccccCccccceeeeeeeeecCCCCCCCCCcceeccccccccc-cCCC-
Q psy17476        179 KEKELLGLQKYDDVNGLTLELIHQVLNY--TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGII-LEKP-  254 (513)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~-~~~p-  254 (513)
                                           |||++..  ..++.++|||||||++|||++ |..||...+..+....+..... .+.+ 
T Consensus       242 ---------------------aPE~~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~  299 (345)
T 3hko_A          242 ---------------------APEVLNTTNESYGPKCDAWSAGVLLHLLLM-GAVPFPGVNDADTISQVLNKKLCFENPN  299 (345)
T ss_dssp             ---------------------CHHHHTCSSSCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCCCCTTSGG
T ss_pred             ---------------------CchhhccCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCCChHHHHHHHHhcccccCCcc
Confidence                                 4555543  467899999999999999999 9999988877666655543322 1111 


Q ss_pred             -------------CCcCCCCCCHHHHHHHHcC
Q psy17476        255 -------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       255 -------------~~w~~~~~~R~~aeeLL~~  273 (513)
                                   .||..++..|+++.++|.+
T Consensus       300 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h  331 (345)
T 3hko_A          300 YNVLSPLARDLLSNLLNRNVDERFDAMRALQH  331 (345)
T ss_dssp             GGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred             cccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                         5788999999999999876

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.77  E-value=3.1e-20  Score=196.51  Aligned_cols=160  Identities=21%  Similarity=0.342  Sum_probs=116.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++....   .+++..+..+++||+.||+|||+++|+||||||+|||++..        +.....++      
T Consensus       108 ~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~--------~~~~~~kl------  170 (484)
T 3nyv_A          108 YTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK--------SKDANIRI------  170 (484)
T ss_dssp             CCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS--------STTCCEEE------
T ss_pred             CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecC--------CCCCcEEE------
Confidence            46899999998765   46899999999999999999999999999999999665321        11223344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          ....   
T Consensus       171 ------~Dfg~a~~~----------------------------------------------------------~~~~---  183 (484)
T 3nyv_A          171 ------IDFGLSTHF----------------------------------------------------------EASK---  183 (484)
T ss_dssp             ------CCTTHHHHB----------------------------------------------------------CCCC---
T ss_pred             ------EeeeeeEEc----------------------------------------------------------cccc---
Confidence                  788876500                                                          0000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+                          +.++|||++.. .|+.++||||+||++|+|++ |..||...+..+
T Consensus       184 -~~~~~~gt--------------------------~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~  234 (484)
T 3nyv_A          184 -KMKDKIGT--------------------------AYYIAPEVLHG-TYDEKCDVWSTGVILYILLS-GCPPFNGANEYD  234 (484)
T ss_dssp             -SHHHHTTG--------------------------GGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -ccccCCCC--------------------------ccccCceeecC-CCCCcceeHHHHHHHHHHHH-CCCCCCCCCHHH
Confidence             00111234                          44455555544 68999999999999999999 999999988888


Q ss_pred             eccccccccccCC-C--------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK-P--------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~-p--------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++..... |              .|+..++..|+++.++|.+
T Consensus       235 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          235 ILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             HHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence            8877765533211 1              4788899999999999986

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.77  E-value=7.7e-20  Score=194.57  Aligned_cols=160  Identities=23%  Similarity=0.406  Sum_probs=118.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..+++||+.||+|||+++|+||||||+|||++.++.        ....++      
T Consensus       128 ~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~--------~~~~kl------  190 (504)
T 3q5i_A          128 YEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNS--------LLNIKI------  190 (504)
T ss_dssp             CTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTC--------CSSEEE------
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCC--------CccEEE------
Confidence            46899999998865   4689999999999999999999999999999999966655431        112344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-                                                          .....   
T Consensus       191 ------~Dfg~a~~----------------------------------------------------------~~~~~---  203 (504)
T 3q5i_A          191 ------VDFGLSSF----------------------------------------------------------FSKDY---  203 (504)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCTTS---
T ss_pred             ------EECCCCEE----------------------------------------------------------cCCCC---
Confidence                  78887750                                                          00000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|                          +|||++. ..|+.++||||+||++|+|++ |..||...+..+
T Consensus       204 -~~~~~~gt~~y--------------------------~aPE~~~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~  254 (504)
T 3q5i_A          204 -KLRDRLGTAYY--------------------------IAPEVLK-KKYNEKCDVWSCGVIMYILLC-GYPPFGGQNDQD  254 (504)
T ss_dssp             -CBCCCCSCTTT--------------------------CCHHHHT-TCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -ccccccCCcCC--------------------------CCHHHhc-cCCCchHHHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence             00111244444                          4455544 368999999999999999999 999999988888


Q ss_pred             eccccccccccCC-------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK-------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~-------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++..+..+.....       +        .|+..++..|+++.++|.+
T Consensus       255 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          255 IIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             HHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            8887766543222       1        4788899999999999986

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.77  E-value=5.9e-20  Score=196.15  Aligned_cols=126  Identities=19%  Similarity=0.233  Sum_probs=94.8

Q ss_pred             CCCCcHHHHHHhcCC-CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHEN-TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      ++||+|.++|.+... ...+++..++.++.||+.||+|||++|||||||||+|||++.++           ..|+     
T Consensus       267 ~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g-----------~vkL-----  330 (543)
T 3c4z_A          267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG-----------NVRI-----  330 (543)
T ss_dssp             CTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS-----------CEEE-----
T ss_pred             ccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCC-----------CEEE-----
Confidence            578999999988542 22579999999999999999999999999999999996665554           3355     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||+++.                                                          +..... 
T Consensus       331 -------~DFGla~~----------------------------------------------------------~~~~~~-  344 (543)
T 3c4z_A          331 -------SDLGLAVE----------------------------------------------------------LKAGQT-  344 (543)
T ss_dssp             -------CCCTTCEE----------------------------------------------------------CCTTCC-
T ss_pred             -------eecceeee----------------------------------------------------------ccCCCc-
Confidence                   88888750                                                          000000 


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK  237 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~  237 (513)
                        ......                          |++.+||||++....|+.++|+||+||++|||++ |..||...+
T Consensus       345 --~~~~~~--------------------------GT~~Y~APE~l~~~~~~~~~DiwSlGvilyellt-G~~PF~~~~  393 (543)
T 3c4z_A          345 --KTKGYA--------------------------GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA-ARGPFRARG  393 (543)
T ss_dssp             --CBCCCC--------------------------SCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCTT
T ss_pred             --cccccc--------------------------CCccccChhhhcCCCCChHHhcCcchHHHHHHHh-CCCCCCCCc
Confidence              000112                          4455566777777789999999999999999999 999997654

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.77  E-value=4.1e-20  Score=202.50  Aligned_cols=162  Identities=28%  Similarity=0.508  Sum_probs=121.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++..+..  .+++..+..++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus       472 ~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~-----------~vkL------  532 (656)
T 2j0j_A          472 CTLGELRSFLQVRKF--SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND-----------CVKL------  532 (656)
T ss_dssp             CTTCBHHHHHHHTTT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-----------EEEE------
T ss_pred             CCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCC-----------CEEE------
Confidence            468999999987653  368889999999999999999999999999999996665544           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                 ..           ..
T Consensus       533 ------~DFG~a~~~~-------------------------------------------------~~-----------~~  546 (656)
T 2j0j_A          533 ------GDFGLSRYME-------------------------------------------------DS-----------TY  546 (656)
T ss_dssp             ------CCCCCCCSCC-------------------------------------------------C--------------
T ss_pred             ------EecCCCeecC-------------------------------------------------CC-----------cc
Confidence                  8888876100                                                 00           00


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ......                          .+++.+||||++....++.++|||||||++|||++.|..||...+..+
T Consensus       547 ~~~~~~--------------------------~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~  600 (656)
T 2j0j_A          547 YKASKG--------------------------KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND  600 (656)
T ss_dssp             ---------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             eeccCC--------------------------CCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence            000000                          122345677777777899999999999999999976999999888888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+++.|            .||..++..||++.+++..
T Consensus       601 ~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~  645 (656)
T 2j0j_A          601 VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  645 (656)
T ss_dssp             HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            88888776665554            4788899999999888753

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.77  E-value=2.1e-20  Score=183.64  Aligned_cols=164  Identities=26%  Similarity=0.476  Sum_probs=115.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++...  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       102 ~~~~~L~~~l~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~-----------~~kl------  162 (291)
T 1u46_A          102 APLGSLLDRLRKHQGH--FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD-----------LVKI------  162 (291)
T ss_dssp             CTTCBHHHHHHHHGGG--SCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT-----------EEEE------
T ss_pred             ccCCCHHHHHHhccCC--cCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCC-----------CEEE------
Confidence            4689999999986543  58889999999999999999999999999999997665554           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                          .......
T Consensus       163 ------~Dfg~~~~~----------------------------------------------------------~~~~~~~  178 (291)
T 1u46_A          163 ------GDFGLMRAL----------------------------------------------------------PQNDDHY  178 (291)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------CC-CCEE
T ss_pred             ------ccccccccc----------------------------------------------------------cccccch
Confidence                  777776500                                                          0000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......+                          ++.+++||++....++.++|+||+|+++|||+++|..||...+..+
T Consensus       179 ~~~~~~~~--------------------------~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  232 (291)
T 1u46_A          179 VMQEHRKV--------------------------PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ  232 (291)
T ss_dssp             EC-----C--------------------------CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             hhhccCCC--------------------------CceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH
Confidence            00000112                          2334566666666789999999999999999987999998887777


Q ss_pred             eccccccc-cccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRG-IILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~-~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+... .+.+.+            .||..++..||++.+++..
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          233 ILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             HHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            76666432 233222            4788888999998888753

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.77  E-value=4.5e-20  Score=191.76  Aligned_cols=164  Identities=19%  Similarity=0.264  Sum_probs=112.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.+++.++.   .+++..++.++.|++.||+|||+++|+||||||+|||++.++.        ....|+      
T Consensus       221 ~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~--------~~~~kl------  283 (419)
T 3i6u_A          221 MEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE--------DCLIKI------  283 (419)
T ss_dssp             CTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSS--------SCCEEE------
T ss_pred             CCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCC--------cceEEE------
Confidence            57899999988754   4689999999999999999999999999999999966654321        223455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-..                                                 ...            
T Consensus       284 ------~DFG~a~~~~-------------------------------------------------~~~------------  296 (419)
T 3i6u_A          284 ------TDFGHSKILG-------------------------------------------------ETS------------  296 (419)
T ss_dssp             ------CCSSTTTSCC----------------------------------------------------------------
T ss_pred             ------eecccceecC-------------------------------------------------CCc------------
Confidence                  7888876100                                                 000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc-
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT-  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~-  239 (513)
                       ......|+.+|+|||++...                       ....|+.++||||+||++|||++ |..||...... 
T Consensus       297 -~~~~~~gt~~y~aPE~~~~~-----------------------~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~  351 (419)
T 3i6u_A          297 -LMRTLCGTPTYLAPEVLVSV-----------------------GTAGYNRAVDCWSLGVILFICLS-GYPPFSEHRTQV  351 (419)
T ss_dssp             ---------CTTCCTTTTC---------------------------CTTHHHHHHHHHHHHHHHHHH-SSCSSCCCSSSC
T ss_pred             -cccccCCCCCccCceeeecC-----------------------CCCCCCchhhhHhHHHHHHHHHH-CCCCCCCCcchH
Confidence             00123467778887765321                       12467889999999999999999 99999765443 


Q ss_pred             eeccccccccccCCC---------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP---------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p---------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+...+..+.....+               .||..++..|+++.++|.+
T Consensus       352 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          352 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             CHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            333444433322211               4788899999999999876

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.77  E-value=2.3e-20  Score=183.68  Aligned_cols=165  Identities=24%  Similarity=0.432  Sum_probs=105.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++......  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       101 ~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~-----------~~kl------  161 (289)
T 3og7_A          101 CEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDN-----------TVKI------  161 (289)
T ss_dssp             CCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTT-----------EEEE------
T ss_pred             cCCCcHHHHHhhccCC--CCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCC-----------CEEE------
Confidence            4689999999876543  58889999999999999999999999999999997666554           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                         ...  -
T Consensus       162 ------~Dfg~~~~~~~---------------------------------------------------------~~~--~  176 (289)
T 3og7_A          162 ------GDFGLATEKSR---------------------------------------------------------WSG--S  176 (289)
T ss_dssp             ------CCCC----------------------------------------------------------------------
T ss_pred             ------ccceecccccc---------------------------------------------------------ccc--c
Confidence                  77777651000                                                         000  0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc-
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT-  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~-  239 (513)
                      .......|+..|+|||.+...                       ....++.++||||+||++|||++ |..||...... 
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~~-----------------------~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~  232 (289)
T 3og7_A          177 HQFEQLSGSILWMAPEVIRMQ-----------------------DSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRD  232 (289)
T ss_dssp             -------CCCTTCCHHHHC---------------------------CCSCHHHHHHHHHHHHHHHHH-SSCTTSSCCCHH
T ss_pred             ccccccCCCccccCchhhccc-----------------------CCCCCCcccchHHHHHHHHHHHH-CCCCccccchHH
Confidence            000112255555555544211                       14467889999999999999999 99999876553 


Q ss_pred             eeccccccccccCC--------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEK--------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~--------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+...+..+...+.        +        .||..++..||++.+++..
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  282 (289)
T 3og7_A          233 QIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAE  282 (289)
T ss_dssp             HHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            33333333322221        1        4688888888888887753

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.77  E-value=4.9e-20  Score=184.18  Aligned_cols=164  Identities=22%  Similarity=0.313  Sum_probs=112.8

Q ss_pred             CCCCcHHHHHHhcCC-CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHEN-TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.+++.+... ...+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++     
T Consensus       117 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~-----------~~kl-----  180 (321)
T 2qkw_B          117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENF-----------VPKI-----  180 (321)
T ss_dssp             CTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTC-----------CEEE-----
T ss_pred             CCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCC-----------CEEE-----
Confidence            468999999987542 22478999999999999999999999999999999996655443           3455     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||+++..                                                          ...   
T Consensus       181 -------~Dfg~~~~~----------------------------------------------------------~~~---  192 (321)
T 2qkw_B          181 -------TDFGISKKG----------------------------------------------------------TEL---  192 (321)
T ss_dssp             -------CCCTTCEEC----------------------------------------------------------SSS---
T ss_pred             -------eeccccccc----------------------------------------------------------ccc---
Confidence                   788876500                                                          000   


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                               .......               ...|++.++|||++....++.++|||||||++|||++ |+.||......
T Consensus       193 ---------~~~~~~~---------------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~-g~~p~~~~~~~  247 (321)
T 2qkw_B          193 ---------DQTHLST---------------VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLC-ARSAIVQSLPR  247 (321)
T ss_dssp             ---------SCCCCBC---------------CCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHH-CCTTCSCSSSS
T ss_pred             ---------ccccccc---------------ccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHh-CCCcccccCcH
Confidence                     0000000               0113445566777777788999999999999999999 99999766554


Q ss_pred             eeccccc----------------cccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQ----------------RGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~----------------~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +....+.                .......+            .||..++..||++.+++..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          248 EMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             SCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            4332211                01111111            5889999999999988764

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.77  E-value=3.9e-20  Score=184.30  Aligned_cols=153  Identities=16%  Similarity=0.131  Sum_probs=105.3

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++......  +++..++.++.|++.||+|||+++||||||||+|||++.++           .+|+        
T Consensus       140 ~~~L~~~~~~~~~~--l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~-----------~~kl--------  198 (311)
T 3p1a_A          140 GPSLQQHCEAWGAS--LPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRG-----------RCKL--------  198 (311)
T ss_dssp             CCBHHHHHHHHCSC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGG-----------CEEE--------
T ss_pred             CCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC-----------CEEE--------
Confidence            78999999887643  68999999999999999999999999999999996655443           4455        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++-.                                                          ....    .
T Consensus       199 ----~DFG~a~~~----------------------------------------------------------~~~~----~  212 (311)
T 3p1a_A          199 ----GDFGLLVEL----------------------------------------------------------GTAG----A  212 (311)
T ss_dssp             ----CCCTTCEEC----------------------------------------------------------C--------
T ss_pred             ----ccceeeeec----------------------------------------------------------ccCC----C
Confidence                888876500                                                          0000    0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .....|+.+|+|||+                          +.. .++.++|||||||++|||++ |..|+.....   .
T Consensus       213 ~~~~~gt~~y~aPE~--------------------------~~~-~~~~~~DiwslG~il~el~~-g~~~~~~~~~---~  261 (311)
T 3p1a_A          213 GEVQEGDPRYMAPEL--------------------------LQG-SYGTAADVFSLGLTILEVAC-NMELPHGGEG---W  261 (311)
T ss_dssp             --CCCCCGGGCCGGG--------------------------GGT-CCSTHHHHHHHHHHHHHHHH-TCCCCSSHHH---H
T ss_pred             CcccCCCccccCHhH--------------------------hcC-CCCchhhHHHHHHHHHHHHh-CCCCCCCccH---H
Confidence            011225556666554                          333 57899999999999999999 7555543221   1


Q ss_pred             ccccccccc-----CCC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        243 DRVQRGIIL-----EKP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       243 ~~i~~~~~~-----~~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+..+..+     ..+        .||..++..|+++.++|.+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          262 QQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             HHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence            112111111     011        5788999999999999976

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.77  E-value=1e-19  Score=186.63  Aligned_cols=130  Identities=16%  Similarity=0.236  Sum_probs=95.7

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh--cceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER--HNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~--~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +|+|.+++...... ++++..++.++.|++.||.|||+  .+||||||||+|||++.+         .....|+      
T Consensus       139 ~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~---------~~~~~kL------  202 (382)
T 2vx3_A          139 SYNLYDLLRNTNFR-GVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNP---------KRSAIKI------  202 (382)
T ss_dssp             CCBHHHHHHHTTTS-CCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESST---------TSCCEEE------
T ss_pred             CCCHHHHHhhcCcC-CCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecC---------CCCcEEE------
Confidence            57999999986533 47899999999999999999994  689999999999665432         2233455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          ..     
T Consensus       203 ------~DFG~a~~~----------------------------------------------------------~~-----  213 (382)
T 2vx3_A          203 ------VDFGSSCQL----------------------------------------------------------GQ-----  213 (382)
T ss_dssp             ------CCCTTCEET----------------------------------------------------------TC-----
T ss_pred             ------EeccCceec----------------------------------------------------------cc-----
Confidence                  788877500                                                          00     


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       .....                          .+++.++|||++....|+.++|||||||++|||++ |..||...+..+
T Consensus       214 -~~~~~--------------------------~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~  265 (382)
T 2vx3_A          214 -RIYQY--------------------------IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHT-GEPLFSGANEVD  265 (382)
T ss_dssp             -CCCSS--------------------------CSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -ccccc--------------------------cCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence             00001                          13445566777777789999999999999999999 999998776655


Q ss_pred             ecccc
Q psy17476        241 VVDRV  245 (513)
Q Consensus       241 ~~~~i  245 (513)
                      .+..+
T Consensus       266 ~~~~i  270 (382)
T 2vx3_A          266 QMNKI  270 (382)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44433

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.77  E-value=3.3e-20  Score=182.47  Aligned_cols=55  Identities=20%  Similarity=0.217  Sum_probs=47.2

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++.....  ++++..++.++.|++.||+|||++||+||||||+||+++.++
T Consensus        83 ~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  137 (288)
T 1ob3_A           83 DQDLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG  137 (288)
T ss_dssp             SEEHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            4689999987654  368889999999999999999999999999999996665544

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.76  E-value=8.5e-20  Score=180.75  Aligned_cols=158  Identities=22%  Similarity=0.304  Sum_probs=116.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.    ++++..+..++.|++.||.|||++||+||||||+||+++.++           ..++      
T Consensus       102 ~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----------~~kl------  160 (303)
T 3a7i_A          102 LGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-----------EVKL------  160 (303)
T ss_dssp             CTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCC-----------CEEE------
Confidence            4678999999753    468899999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++..                                                          ......  
T Consensus       161 ------~Dfg~~~~----------------------------------------------------------~~~~~~--  174 (303)
T 3a7i_A          161 ------ADFGVAGQ----------------------------------------------------------LTDTQI--  174 (303)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CBTTBC--
T ss_pred             ------eeccccee----------------------------------------------------------cCcccc--
Confidence                  77777640                                                          000000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ....                          ..+++.+++||++....++.++|+|||||++|||++ |..||......+
T Consensus       175 -~~~~--------------------------~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~  226 (303)
T 3a7i_A          175 -KRNT--------------------------FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHPMK  226 (303)
T ss_dssp             -CBCC--------------------------CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHH
T ss_pred             -ccCc--------------------------cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHcc-CCCCCCCcCHHH
Confidence             0000                          113445566777777788999999999999999999 999998877766


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+..+..+..+            .||..++..||++.+++.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          227 VLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             HHHHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            66555444333322            4789999999999999875

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.76  E-value=4.4e-20  Score=185.03  Aligned_cols=168  Identities=26%  Similarity=0.390  Sum_probs=120.4

Q ss_pred             CCCCcHHHHHHhcCCC----CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEE
Q psy17476          1 MRHGSLLNYLRRHENT----LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVV   76 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~----~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~   76 (513)
                      +++|+|.+++.+....    ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.        ....++  
T Consensus       115 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~--------~~~~kl--  184 (327)
T 2yfx_A          115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGP--------GRVAKI--  184 (327)
T ss_dssp             CTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSST--------TCCEEE--
T ss_pred             CCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCC--------cceEEE--
Confidence            4689999999986531    23688899999999999999999999999999999976664321        112344  


Q ss_pred             EeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecC
Q psy17476         77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT  156 (513)
Q Consensus        77 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  156 (513)
                                .|||+++....                                                          .
T Consensus       185 ----------~Dfg~~~~~~~----------------------------------------------------------~  196 (327)
T 2yfx_A          185 ----------GDFGMARDIYR----------------------------------------------------------A  196 (327)
T ss_dssp             ----------CCCHHHHHHHC-----------------------------------------------------------
T ss_pred             ----------Ccccccccccc----------------------------------------------------------c
Confidence                      77777640000                                                          0


Q ss_pred             CccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCC
Q psy17476        157 QEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRL  236 (513)
Q Consensus       157 ~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~  236 (513)
                      .. ........                          +++.++|||++....++.++|||||||++|||+|.|..||...
T Consensus       197 ~~-~~~~~~~~--------------------------~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  249 (327)
T 2yfx_A          197 SY-YRKGGCAM--------------------------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK  249 (327)
T ss_dssp             ------CCGGG--------------------------SCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             cc-cccCCCcC--------------------------CCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc
Confidence            00 00000011                          2334556666666788999999999999999998799999988


Q ss_pred             CcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        237 KNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       237 ~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ...++...+..+.++..+            .||..++..||++.+++..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  298 (327)
T 2yfx_A          250 SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER  298 (327)
T ss_dssp             CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            877777777666554443            4789999999999998874

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.76  E-value=8.2e-20  Score=182.69  Aligned_cols=166  Identities=17%  Similarity=0.264  Sum_probs=111.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++...... .+++..++.++.|++.||+|||++||+||||||+||+++.++           ..++      
T Consensus       109 ~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~-----------~~kl------  170 (326)
T 2x7f_A          109 CGAGSVTDLIKNTKGN-TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA-----------EVKL------  170 (326)
T ss_dssp             CTTEEHHHHHHHSGGG-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTC-----------CEEE------
T ss_pred             CCCCcHHHHHHhcccC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCC-----------CEEE------
Confidence            4578999999986432 478899999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....                                                          ....  
T Consensus       171 ------~Dfg~~~~~~----------------------------------------------------------~~~~--  184 (326)
T 2x7f_A          171 ------VDFGVSAQLD----------------------------------------------------------RTVG--  184 (326)
T ss_dssp             ------CCCTTTC-------------------------------------------------------------------
T ss_pred             ------eeCcCceecC----------------------------------------------------------cCcc--
Confidence                  7777765100                                                          0000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|||.+....                     -....++.++|||||||++|||++ |..||...+..+
T Consensus       185 -~~~~~~~~~~y~aPE~~~~~~---------------------~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~  241 (326)
T 2x7f_A          185 -RRNTFIGTPYWMAPEVIACDE---------------------NPDATYDFKSDLWSLGITAIEMAE-GAPPLCDMHPMR  241 (326)
T ss_dssp             -------CCGGGCCHHHHC-----------------------------CCTTHHHHHHHHHHHHHHH-SSCTTTTSCHHH
T ss_pred             -ccccccCCccccChhhhcccc---------------------ccCcCCCccchHHHHHHHHHHHHh-CCCCCCCCcHHH
Confidence             001112555666665543110                     013467899999999999999999 999998776655


Q ss_pred             eccccccccccCC-----C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK-----P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~-----p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.....+..     +        .||..++..|+++.+++.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          242 ALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH  287 (326)
T ss_dssp             HHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            5444433222111     1        5788999999999999976

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.76  E-value=5.7e-20  Score=180.63  Aligned_cols=163  Identities=18%  Similarity=0.262  Sum_probs=111.4

Q ss_pred             CCCCcHHHHHHhcC-CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHE-NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.+++.... ....+++..+..++.|++.||+|||+++|+||||||+||+++.++        .....++     
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~--------~~~~~kl-----  168 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS--------PHSPIKI-----  168 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSS--------TTCCEEE-----
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCC--------CCCCEEE-----
Confidence            46899999997642 112478999999999999999999999999999999996653321        1122344     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||+++...                                                 .+.           
T Consensus       169 -------~Dfg~a~~~~-------------------------------------------------~~~-----------  181 (285)
T 3is5_A          169 -------IDFGLAELFK-------------------------------------------------SDE-----------  181 (285)
T ss_dssp             -------CCCCCCCC-----------------------------------------------------------------
T ss_pred             -------EeeecceecC-------------------------------------------------Ccc-----------
Confidence                   7787765100                                                 000           


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                        ......|+..|+||                          |++. ..++.++|+||+||++|||++ |..||...+..
T Consensus       182 --~~~~~~~t~~y~aP--------------------------E~~~-~~~~~~~Di~slG~il~~ll~-g~~pf~~~~~~  231 (285)
T 3is5_A          182 --HSTNAAGTALYMAP--------------------------EVFK-RDVTFKCDIWSAGVVMYFLLT-GCLPFTGTSLE  231 (285)
T ss_dssp             -------CTTGGGCCH--------------------------HHHT-TCCCHHHHHHHHHHHHHHHHH-SSCSSCCSSHH
T ss_pred             --cCcCcccccCcCCh--------------------------HHhc-cCCCcccCeehHHHHHHHHHh-CCCCCCCCCHH
Confidence              00111244455554                          4443 357889999999999999999 99999887766


Q ss_pred             eeccccccccccC------CC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILE------KP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~------~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++...+.......      .+        .||..++..||++.++|.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          232 EVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             HHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             HHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            6555443221111      11        4788999999999999875

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.76  E-value=9.6e-20  Score=183.56  Aligned_cols=162  Identities=17%  Similarity=0.292  Sum_probs=98.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.... .+++..++.++.|++.||+|||+++|+||||||+|||++.++.        ....++      
T Consensus       108 ~~gg~L~~~l~~~~~~-~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~--------~~~~kl------  172 (336)
T 3fhr_A          108 MEGGELFSRIQERGDQ-AFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEK--------DAVLKL------  172 (336)
T ss_dssp             CTTEEHHHHHHTC-CC-CCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSST--------TCCEEE------
T ss_pred             cCCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCC--------CceEEE------
Confidence            4689999999986543 4799999999999999999999999999999999976654321        122344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++....                                                          .    
T Consensus       173 ------~Dfg~~~~~~~----------------------------------------------------------~----  184 (336)
T 3fhr_A          173 ------TDFGFAKETTQ----------------------------------------------------------N----  184 (336)
T ss_dssp             ------CCCTTCEEC-----------------------------------------------------------------
T ss_pred             ------eccccceeccc----------------------------------------------------------c----
Confidence                  77877651000                                                          0    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+||                          |++....++.++||||+||++|+|++ |..||.......
T Consensus       185 -~~~~~~~t~~y~aP--------------------------E~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~  236 (336)
T 3fhr_A          185 -ALQTPCYTPYYVAP--------------------------EVLGPEKYDKSCDMWSLGVIMYILLC-GFPPFYSNTGQA  236 (336)
T ss_dssp             ----------------------------------------------CHHHHHHHHHHHHHHHHHHHH-SSCCC-------
T ss_pred             -ccccCCCCcCccCh--------------------------hhhCCCCCCchhhHHHHHHHHHHHHH-CCCCCCCccchh
Confidence             00111244445554                          44555577899999999999999999 999997665544


Q ss_pred             ec----cccccc-cccCCC--------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VV----DRVQRG-IILEKP--------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~----~~i~~~-~~~~~p--------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.    ..+..+ ...+.+              .||..++..|+++.++|.+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          237 ISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH  288 (336)
T ss_dssp             --------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             hhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            32    222111 111111              4788899999999999876

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.76  E-value=7.3e-20  Score=180.30  Aligned_cols=55  Identities=18%  Similarity=0.285  Sum_probs=46.7

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++.....  .+++..++.++.|++.||+|||++||+||||||+||+++.++
T Consensus        84 ~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~  138 (292)
T 3o0g_A           84 DQDLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG  138 (292)
T ss_dssp             SEEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            4688888877544  368999999999999999999999999999999996665554

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.76  E-value=7e-20  Score=185.42  Aligned_cols=55  Identities=15%  Similarity=0.184  Sum_probs=47.0

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++......  +++..++.++.|++.||+|||++||+||||||+|||++.++
T Consensus       107 ~~~l~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~  161 (351)
T 3mi9_A          107 EHDLAGLLSNVLVK--FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG  161 (351)
T ss_dssp             SEEHHHHHHCTTSC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CCCHHHHHhhccCC--CCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC
Confidence            46888888876543  58889999999999999999999999999999996665554

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.76  E-value=3.4e-20  Score=183.28  Aligned_cols=162  Identities=27%  Similarity=0.463  Sum_probs=110.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++...  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       107 ~~~~~L~~~l~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~-----------~~kl------  167 (302)
T 4e5w_A          107 LPSGSLKEYLPKNKNK--INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH-----------QVKI------  167 (302)
T ss_dssp             CTTCBHHHHHHHHTTT--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT-----------EEEE------
T ss_pred             CCCCcHHHHHHhcccc--CCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCC-----------CEEE------
Confidence            4689999999876544  58889999999999999999999999999999996665554           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-                                                          ........
T Consensus       168 ------~Dfg~~~~----------------------------------------------------------~~~~~~~~  183 (302)
T 4e5w_A          168 ------GDFGLTKA----------------------------------------------------------IETDKEYY  183 (302)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCTTCCEE
T ss_pred             ------Cccccccc----------------------------------------------------------ccCCCcce
Confidence                  77877650                                                          00000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCC----
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRL----  236 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~----  236 (513)
                      ......                          .+++.++|||++....++.++|+||+||++|||++ |..|+...    
T Consensus       184 ~~~~~~--------------------------~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~  236 (302)
T 4e5w_A          184 TVKDDR--------------------------DSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-YCDSDSSPMALF  236 (302)
T ss_dssp             ECCCCT--------------------------TCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT-TTCGGGSHHHHH
T ss_pred             eccCCC--------------------------CCCccccCCeeecCCCCCcchhHHHHHHHHHHHHH-ccCCCcchhhHH
Confidence            000001                          13334566676777788999999999999999999 88875321    


Q ss_pred             -----------CcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        237 -----------KNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       237 -----------~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                                 ....+...+..+.+.+.+            .||..++..||++.+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          237 LKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             hhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence                       112223333334443333            578899999999988875

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.76  E-value=2.8e-20  Score=181.77  Aligned_cols=162  Identities=19%  Similarity=0.317  Sum_probs=118.2

Q ss_pred             CCCCcHHHHHHhcCC-CCCCchhHHHHHHHHHHHHHHHHHhcc-----eeccccCcccccccCccccccccCCccCCCce
Q psy17476          1 MRHGSLLNYLRRHEN-TLGGNVGLLLDMCIQVCKGMAYLERHN-----YIHRETKKSLYPSSLNEISFILWPDQMIRPKV   74 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~gl~ylH~~~-----iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~   74 (513)
                      +++|+|.+++.+... ...+++..+..++.|++.||+|||+++     |+||||||+||+++.++           ..++
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~-----------~~kl  157 (279)
T 2w5a_A           89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ-----------NVKL  157 (279)
T ss_dssp             CTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSS-----------CEEE
T ss_pred             CCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCC-----------CEEE
Confidence            467899999987532 223789999999999999999999999     99999999996665543           3344


Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEee
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMD  154 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  154 (513)
                                  .|||+++-.                                                          .
T Consensus       158 ------------~dfg~~~~~----------------------------------------------------------~  167 (279)
T 2w5a_A          158 ------------GDFGLARIL----------------------------------------------------------N  167 (279)
T ss_dssp             ------------CCCCHHHHC-----------------------------------------------------------
T ss_pred             ------------ecCchheee----------------------------------------------------------c
Confidence                        778776510                                                          0


Q ss_pred             cCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCC
Q psy17476        155 DTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYG  234 (513)
Q Consensus       155 ~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~  234 (513)
                      ....   ......                          +++.++|||++....++.++|+|||||++|||++ |..||.
T Consensus       168 ~~~~---~~~~~~--------------------------~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~  217 (279)
T 2w5a_A          168 HDTS---FAKTFV--------------------------GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA-LMPPFT  217 (279)
T ss_dssp             --CH---HHHHHH--------------------------SCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHH-SSCSSC
T ss_pred             cccc---cccccC--------------------------CCccccChHHhccCCCCchhhHHHHHHHHHHHHH-CCCCCc
Confidence            0000   000001                          3344566677777788999999999999999999 999999


Q ss_pred             CCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        235 RLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+..++...+..+.....+            .||..++..||++.++|.+
T Consensus       218 ~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  268 (279)
T 2w5a_A          218 AFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  268 (279)
T ss_dssp             CSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ccCHHHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence            88877777777666554333            5799999999999999986

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.76  E-value=6.3e-20  Score=183.87  Aligned_cols=131  Identities=21%  Similarity=0.304  Sum_probs=93.2

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .|+|.+++.+....  +++..++.++.|++.||+|||++||+||||||+||+++.++           ..++        
T Consensus        83 ~~~l~~~~~~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~-----------~~kl--------  141 (324)
T 3mtl_A           83 DKDLKQYLDDCGNI--INMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERG-----------ELKL--------  141 (324)
T ss_dssp             SEEHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTC-----------CEEE--------
T ss_pred             ccCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCC-----------CEEE--------
Confidence            47999999987653  58889999999999999999999999999999996665554           3344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++.....                                                          ..   .
T Consensus       142 ----~Dfg~a~~~~~~----------------------------------------------------------~~---~  156 (324)
T 3mtl_A          142 ----ADFGLARAKSIP----------------------------------------------------------TK---T  156 (324)
T ss_dssp             ----CSSSEEECC-------------------------------------------------------------------
T ss_pred             ----ccCcccccccCC----------------------------------------------------------cc---c
Confidence                788876510000                                                          00   0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc-ccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY-TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      .....|+..|                          +|||++.. ..++.++||||+||++|||++ |..||...+..+.
T Consensus       157 ~~~~~~t~~y--------------------------~aPE~~~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~  209 (324)
T 3mtl_A          157 YDNEVVTLWY--------------------------RPPDILLGSTDYSTQIDMWGVGCIFYEMAT-GRPLFPGSTVEEQ  209 (324)
T ss_dssp             ------CGGG--------------------------CCHHHHTTCCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHH
T ss_pred             cccccCcccc--------------------------cChhhhcCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Confidence            0011234444                          45555543 467999999999999999999 9999988776655


Q ss_pred             ccccc
Q psy17476        242 VDRVQ  246 (513)
Q Consensus       242 ~~~i~  246 (513)
                      ...+.
T Consensus       210 ~~~i~  214 (324)
T 3mtl_A          210 LHFIF  214 (324)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            54443

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.76  E-value=3.3e-20  Score=187.61  Aligned_cols=166  Identities=14%  Similarity=0.118  Sum_probs=111.9

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++.+..   .+++..++.++.||+.||+|||+++|+||||||+|||++.++.         ...++        
T Consensus       135 ~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~---------~~~kL--------  194 (345)
T 2v62_A          135 GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNP---------DQVYL--------  194 (345)
T ss_dssp             EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSST---------TSEEE--------
T ss_pred             CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCC---------CcEEE--------
Confidence            689999998865   4689999999999999999999999999999999966655431         13344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++-.                                                          ....     
T Consensus       195 ----~Dfg~a~~~----------------------------------------------------------~~~~-----  207 (345)
T 2v62_A          195 ----ADYGLSYRY----------------------------------------------------------CPNG-----  207 (345)
T ss_dssp             ----CCCTTCEES----------------------------------------------------------SGGG-----
T ss_pred             ----EeCCCceec----------------------------------------------------------cccc-----
Confidence                788877510                                                          0000     


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc-cee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-TEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~-~~~  241 (513)
                           ....+..            .+.....+++.++|||++....++.++|||||||++|||++ |..||..... ...
T Consensus       208 -----~~~~~~~------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~-g~~pf~~~~~~~~~  269 (345)
T 2v62_A          208 -----NHKQYQE------------NPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLC-GKLPWEQNLKDPVA  269 (345)
T ss_dssp             -----CCCCCCC------------CGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHH-SSCTTGGGTTCHHH
T ss_pred             -----ccccchh------------ccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHh-CCCCccccccccHH
Confidence                 0000000            00011235566677777777789999999999999999999 9999964322 111


Q ss_pred             cccccccccc-------------CCC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        242 VDRVQRGIIL-------------EKP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       242 ~~~i~~~~~~-------------~~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..........             ..+        .||..++..||++++++..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  322 (345)
T 2v62_A          270 VQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKI  322 (345)
T ss_dssp             HHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             HHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence            1111111000             111        5899999999999998764

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.76  E-value=2e-19  Score=184.54  Aligned_cols=56  Identities=25%  Similarity=0.343  Sum_probs=48.8

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhc-ceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERH-NYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~-~iiHrdikp~N~~~~~~~   59 (513)
                      +|+|.+++.+.... ++++..++.++.||+.||+|||++ |||||||||+|||++.++
T Consensus       128 ~~~l~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          128 GHHLLKWIIKSNYQ-GLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             CCBHHHHHHHTTTS-CCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred             CccHHHHHHhcccC-CCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence            67888888876433 478999999999999999999999 999999999998887765

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.76  E-value=7.8e-20  Score=193.00  Aligned_cols=167  Identities=14%  Similarity=0.170  Sum_probs=112.8

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++......  +++..++.|+.||+.||+|||+++||||||||+|||++.+        +.....++        
T Consensus        86 g~sL~~ll~~~~~~--l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~--------~~~~~vkL--------  147 (483)
T 3sv0_A           86 GPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG--------RRANQVYI--------  147 (483)
T ss_dssp             CCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCG--------GGTTCEEE--------
T ss_pred             CCCHHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecC--------CCCCeEEE--------
Confidence            79999999875544  5899999999999999999999999999999999665321        22333455        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++..                                                          .....    
T Consensus       148 ----~DFGla~~~----------------------------------------------------------~~~~~----  161 (483)
T 3sv0_A          148 ----IDFGLAKKY----------------------------------------------------------RDTST----  161 (483)
T ss_dssp             ----CCCTTCEEC----------------------------------------------------------BCTTT----
T ss_pred             ----EeCCcceec----------------------------------------------------------cCCcc----
Confidence                888887610                                                          00000    


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                          .....+...              ....|++.+++||++....++.++|||||||++|||++ |..||.........
T Consensus       162 ----~~~~~~~~~--------------~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~  222 (483)
T 3sv0_A          162 ----HQHIPYREN--------------KNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKK  222 (483)
T ss_dssp             ----CCBCCCCCC--------------CCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTSSCCCSSHH
T ss_pred             ----ccccccccc--------------cccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHh-CCCCCccccchhHH
Confidence                000000000              01234556667777777789999999999999999999 99999876553322


Q ss_pred             cccc---cccc--------cCCC--------CCcCCCCCCHHHHHHHHc
Q psy17476        243 DRVQ---RGII--------LEKP--------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       243 ~~i~---~~~~--------~~~p--------~~w~~~~~~R~~aeeLL~  272 (513)
                      +.+.   ....        ...|        .||..++..||.+.+++.
T Consensus       223 ~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          223 QKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            2221   1100        1112        589999999998887654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.76  E-value=6.7e-20  Score=192.91  Aligned_cols=126  Identities=17%  Similarity=0.170  Sum_probs=90.4

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .|+|.+++..     .+++..++.++.|++.||+|||++|||||||||+|||++.++           ..|+        
T Consensus       150 ~~~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~-----------~~kl--------  205 (464)
T 3ttj_A          150 DANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-----------TLKI--------  205 (464)
T ss_dssp             SEEHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-----------CEEE--------
T ss_pred             CCCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCC-----------CEEE--------
Confidence            3667777754     258889999999999999999999999999999996665554           3455        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++...                                                          ...    .
T Consensus       206 ----~DFG~a~~~~----------------------------------------------------------~~~----~  219 (464)
T 3ttj_A          206 ----LDFGLARTAG----------------------------------------------------------TSF----M  219 (464)
T ss_dssp             ----CCCCCC---------------------------------------------------------------CC----C
T ss_pred             ----EEEEeeeecC----------------------------------------------------------CCc----c
Confidence                8888876100                                                          000    0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .....|                          ++.++|||++....|+.++||||+||++|||++ |+.||.+.+..+.+
T Consensus       220 ~~~~~g--------------------------t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pF~g~~~~~~~  272 (464)
T 3ttj_A          220 MTPYVV--------------------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQW  272 (464)
T ss_dssp             C----C--------------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHH
T ss_pred             cCCCcc--------------------------cccccCHHHHcCCCCCHHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Confidence            001113                          344556666777789999999999999999999 99999887765544


Q ss_pred             ccc
Q psy17476        243 DRV  245 (513)
Q Consensus       243 ~~i  245 (513)
                      ..+
T Consensus       273 ~~i  275 (464)
T 3ttj_A          273 NKV  275 (464)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.76  E-value=1.9e-19  Score=181.44  Aligned_cols=151  Identities=17%  Similarity=0.230  Sum_probs=106.4

Q ss_pred             CC-cHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          3 HG-SLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         3 ~g-~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      +| +|.+++.++.   .+++..++.++.|++.||+|||+++|+||||||+|||++.++           ..++       
T Consensus       113 ~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-----------~~kL-------  171 (335)
T 3dls_A          113 SGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDF-----------TIKL-------  171 (335)
T ss_dssp             TSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS-----------CEEE-------
T ss_pred             CCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCC-----------cEEE-------
Confidence            45 9999998865   368999999999999999999999999999999996655543           3455       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .|||+++.                                                          +....    
T Consensus       172 -----~Dfg~a~~----------------------------------------------------------~~~~~----  184 (335)
T 3dls_A          172 -----IDFGSAAY----------------------------------------------------------LERGK----  184 (335)
T ss_dssp             -----CCCTTCEE----------------------------------------------------------CCTTC----
T ss_pred             -----eecccceE----------------------------------------------------------CCCCC----
Confidence                 78887650                                                          00000    


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccc-cccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRF-SSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ......|+                          +.++|||++....+ +.++|||||||++|||++ |..||.....  
T Consensus       185 ~~~~~~gt--------------------------~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~--  235 (335)
T 3dls_A          185 LFYTFCGT--------------------------IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF-EENPFCELEE--  235 (335)
T ss_dssp             CBCEECSC--------------------------GGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHH-SSCSCSSGGG--
T ss_pred             ceeccCCC--------------------------ccccChhhhcCCCCCCCcccchhHHHHHHHHHh-CCCchhhHHH--
Confidence            00011234                          44455555555565 788999999999999999 9999965322  


Q ss_pred             eccccccccccCC--C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK--P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~--p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                         .+......+.  +        .||..++..|+++.++|.+
T Consensus       236 ---~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          236 ---TVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             ---GTTTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             ---HHhhccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               1111111111  1        5788999999999999986

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.76  E-value=2e-19  Score=179.99  Aligned_cols=58  Identities=24%  Similarity=0.328  Sum_probs=49.7

Q ss_pred             CCCCcHHHHHHhcCC-CCCCchhHHHHHHHHHHHHHHHHHhc---ceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHEN-TLGGNVGLLLDMCIQVCKGMAYLERH---NYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~gl~ylH~~---~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++++... ..++++..+..++.|++.||+|||++   +|+||||||+|||++.+
T Consensus       109 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~  170 (326)
T 3uim_A          109 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE  170 (326)
T ss_dssp             CTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred             ccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence            468999999998643 22478999999999999999999999   99999999999665554

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.76  E-value=7.2e-20  Score=186.48  Aligned_cols=53  Identities=19%  Similarity=0.249  Sum_probs=46.4

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +|+|.++++..    .+++..++.++.|++.||+|||++||+||||||+|||++.++
T Consensus       113 ~~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~  165 (364)
T 3qyz_A          113 ETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC  165 (364)
T ss_dssp             SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             CcCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCC
Confidence            57999999774    368899999999999999999999999999999996665554

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.76  E-value=8.2e-20  Score=182.43  Aligned_cols=57  Identities=18%  Similarity=0.264  Sum_probs=47.5

Q ss_pred             CCcHHHHHHhcCC---CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHEN---TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++.....   ..++++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus        86 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~  145 (317)
T 2pmi_A           86 DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRG  145 (317)
T ss_dssp             CCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             CCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCC
Confidence            4799999987531   12478899999999999999999999999999999996665554

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.76  E-value=4.8e-20  Score=186.83  Aligned_cols=168  Identities=11%  Similarity=0.076  Sum_probs=112.1

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++.+.... .+++..+..++.||+.||+|||+++|+||||||+|||++.++.         ...++        
T Consensus       141 ~~~L~~~l~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~---------~~~kl--------  202 (352)
T 2jii_A          141 GRSLQSALDVSPKH-VLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQ---------SQVTL--------  202 (352)
T ss_dssp             CEEHHHHHHHSGGG-CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEE---------EEEEE--------
T ss_pred             CcCHHHHHHhCCcC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCC---------ceEEE--------
Confidence            79999999986322 4789999999999999999999999999999999976665531         12244        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++...-                                                          ..     
T Consensus       203 ----~Dfg~a~~~~~----------------------------------------------------------~~-----  215 (352)
T 2jii_A          203 ----AGYGFAFRYCP----------------------------------------------------------SG-----  215 (352)
T ss_dssp             ----CCGGGCBCSSG----------------------------------------------------------GG-----
T ss_pred             ----ecCcceeeccC----------------------------------------------------------CC-----
Confidence                77877751000                                                          00     


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC-c-ce
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK-N-TE  240 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~-~-~~  240 (513)
                           ....+...            ......+++.++|||++....++.++|||||||++|||++ |..||.... . ..
T Consensus       216 -----~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~~~~~~  277 (352)
T 2jii_A          216 -----KHVAYVEG------------SRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLY-GFLPWTNCLPNTED  277 (352)
T ss_dssp             -----CCCCCCTT------------SSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SCCTTGGGTTCHHH
T ss_pred             -----cccccccc------------ccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHh-CCCCcccCCcCHHH
Confidence                 00000000            0001124556677777777789999999999999999999 999998654 2 22


Q ss_pred             eccccccc--ccc----------CCC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRG--IIL----------EKP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~--~~~----------~~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.......  ...          ..+        .||..++..||++.+++..
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  330 (352)
T 2jii_A          278 IMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNN  330 (352)
T ss_dssp             HHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             HHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHH
Confidence            22222110  000          011        5788999999999888764

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.76  E-value=8.9e-20  Score=181.73  Aligned_cols=173  Identities=16%  Similarity=0.221  Sum_probs=115.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..+..++.|++.||+|||+++|+||||||+||+++..            ..++      
T Consensus       111 ~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~------------~~~l------  170 (319)
T 2y4i_B          111 CKGRTLYSVVRDAKIV--LDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNG------------KVVI------  170 (319)
T ss_dssp             CCSEEHHHHTTSSCCC--CCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--------------CCEE------
T ss_pred             ccCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeCC------------CEEE------
Confidence            4689999999876543  5888999999999999999999999999999999665421            2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-....                                                       ... ...
T Consensus       171 ------~Dfg~~~~~~~~-------------------------------------------------------~~~-~~~  188 (319)
T 2y4i_B          171 ------TDFGLFSISGVL-------------------------------------------------------QAG-RRE  188 (319)
T ss_dssp             ------CCCSCCC------------------------------------------------------------------C
T ss_pred             ------eecCCccccccc-------------------------------------------------------ccc-ccc
Confidence                  778776510000                                                       000 000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+..|+|||.+.....-                 .......++.++|||||||++|||++ |..||...+..+
T Consensus       189 ~~~~~~~g~~~y~aPE~~~~~~~~-----------------~~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~  250 (319)
T 2y4i_B          189 DKLRIQNGWLCHLAPEIIRQLSPD-----------------TEEDKLPFSKHSDVFALGTIWYELHA-REWPFKTQPAEA  250 (319)
T ss_dssp             CSCBCCSGGGGTSCHHHHSCBSCC-------------------CCCSCCCHHHHHHHHHHHHHHHHH-SSCSSSSCCHHH
T ss_pred             cccccCCCcccccChHHhhhcccc-----------------ccccccCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence            000112255556666554321100                 00012357899999999999999999 999999887777


Q ss_pred             eccccccccccCCC-------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+..+..+             .||..++..||++.+++..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~  296 (319)
T 2y4i_B          251 IIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDM  296 (319)
T ss_dssp             HHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred             HHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            76666554433222             4788999999999998765

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.76  E-value=4.5e-20  Score=184.59  Aligned_cols=171  Identities=18%  Similarity=0.298  Sum_probs=110.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.......++..++.++.|++.||+|||+++|+||||||+|||++.++           ..++      
T Consensus       143 ~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-----------~~kL------  205 (332)
T 3qd2_B          143 CRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-----------VVKV------  205 (332)
T ss_dssp             CCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----------CEEE------
T ss_pred             cCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCC-----------CEEE------
Confidence            46899999999876544456667899999999999999999999999999996665554           3345      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++...                                                          ....  
T Consensus       206 ------~DfG~a~~~~----------------------------------------------------------~~~~--  219 (332)
T 3qd2_B          206 ------GDFGLVTAMD----------------------------------------------------------QDEE--  219 (332)
T ss_dssp             ------CCCTTCEECS----------------------------------------------------------CC----
T ss_pred             ------eecCcccccc----------------------------------------------------------cchh--
Confidence                  7888875100                                                          0000  


Q ss_pred             eeeecCCCcccccc-CCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIP-SNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~p-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                             ......+ +.+.         ......|++.++|||++....++.++||||+||++|||++ |..|+...  .
T Consensus       220 -------~~~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-~~~~~~~~--~  280 (332)
T 3qd2_B          220 -------EQTVLTPMPAYA---------THTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLY-SFSTQMER--V  280 (332)
T ss_dssp             ----------------------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHS-CCCCHHHH--H
T ss_pred             -------hccccccccccc---------cccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHH-cCCChhHH--H
Confidence                   0000000 0000         0001225566677777777889999999999999999999 77765321  1


Q ss_pred             eeccccccccccC------------CCCCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILE------------KPKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~------------~p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++...+.....+.            ...||..++..||++.++|.+
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          281 RIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             HHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred             HHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence            1111111111110            115789999999999999976

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.76  E-value=1.3e-19  Score=182.08  Aligned_cols=55  Identities=24%  Similarity=0.314  Sum_probs=47.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhc---------ceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERH---------NYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~---------~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.++.    .++..+..++.||+.||+|||++         +||||||||+|||++.++
T Consensus        94 ~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~  157 (336)
T 3g2f_A           94 YPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDG  157 (336)
T ss_dssp             CTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTS
T ss_pred             CCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCC
Confidence            46899999998764    36788999999999999999999         999999999996665543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.76  E-value=9e-20  Score=183.61  Aligned_cols=159  Identities=23%  Similarity=0.287  Sum_probs=113.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..++.++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       123 ~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~-----------~~kl------  182 (335)
T 2owb_A          123 CRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL-----------EVKI------  182 (335)
T ss_dssp             CTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC-----------CEEE------
T ss_pred             CCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCC-----------CEEE------
Confidence            46799999998764   468999999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          .....  
T Consensus       183 ------~Dfg~~~~~----------------------------------------------------------~~~~~--  196 (335)
T 2owb_A          183 ------GDFGLATKV----------------------------------------------------------EYDGE--  196 (335)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------CSTTC--
T ss_pred             ------eeccCceec----------------------------------------------------------ccCcc--
Confidence                  788876510                                                          00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+                          +.+++||++....++.++|||||||++|||++ |..||......+
T Consensus       197 -~~~~~~gt--------------------------~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~  248 (335)
T 2owb_A          197 -RKKVLCGT--------------------------PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV-GKPPFETSCLKE  248 (335)
T ss_dssp             -CBCCCCSC--------------------------CSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHH-SSCTTCCSSHHH
T ss_pred             -cccccCCC--------------------------ccccCHHHhccCCCCchhhHHHHHHHHHHHHH-CcCCCCCCCHHH
Confidence             00011133                          34455666666678999999999999999999 999998777666


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.........           .||..++..|+++.++|.+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          249 TYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             HHHHHHHTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             HHHHHhcCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            55555433221111           4788888888988888875

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.76  E-value=1e-19  Score=179.38  Aligned_cols=159  Identities=23%  Similarity=0.287  Sum_probs=113.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        97 ~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----------~~kl------  156 (294)
T 2rku_A           97 CRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL-----------EVKI------  156 (294)
T ss_dssp             CTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----------CEEE------
T ss_pred             CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCC-----------CEEE------
Confidence            46799999998765   468999999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          .....  
T Consensus       157 ------~dfg~~~~~----------------------------------------------------------~~~~~--  170 (294)
T 2rku_A          157 ------GDFGLATKV----------------------------------------------------------EYDGE--  170 (294)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------CSTTC--
T ss_pred             ------EeccCceec----------------------------------------------------------ccCcc--
Confidence                  778776500                                                          00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+                          +.+++||++....++.++|+||+|+++|||++ |..||......+
T Consensus       171 -~~~~~~~~--------------------------~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~  222 (294)
T 2rku_A          171 -RKKVLCGT--------------------------PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV-GKPPFETSCLKE  222 (294)
T ss_dssp             -CBCCCCSC--------------------------CSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHH-SSCTTCCSSHHH
T ss_pred             -ccccccCC--------------------------CCcCCcchhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence             00001133                          34455666666678999999999999999999 999998877665


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.......+.           .||..++..|+++.+++.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          223 TYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             HHHHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             HHHHHhhccCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            55555433221111           4788888888988888875

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.76  E-value=1.7e-19  Score=176.48  Aligned_cols=59  Identities=22%  Similarity=0.219  Sum_probs=48.8

Q ss_pred             CCCCcHHHHHHhcCC-CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHEN-TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+... ...+++..++.++.|++.||+|||+++|+||||||+||+++.++
T Consensus        93 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~  152 (289)
T 1x8b_A           93 CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTS  152 (289)
T ss_dssp             CTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---
T ss_pred             cCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCC
Confidence            468899999988532 11468999999999999999999999999999999998877654

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.76  E-value=1.8e-19  Score=180.12  Aligned_cols=158  Identities=20%  Similarity=0.278  Sum_probs=112.6

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .|+|.+++.+.... .+++..+..++.|++.||+|||++||+||||||+||+++.++           ..++        
T Consensus       102 ~~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~-----------~~kl--------  161 (326)
T 1blx_A          102 DQDLTTYLDKVPEP-GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-----------QIKL--------  161 (326)
T ss_dssp             SCBHHHHHHHSCTT-CSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-----------CEEE--------
T ss_pred             CCCHHHHHHhcccC-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCC-----------CEEE--------
Confidence            48999999986543 478999999999999999999999999999999996665554           3344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++-.                                                          ....    .
T Consensus       162 ----~Dfg~~~~~----------------------------------------------------------~~~~----~  175 (326)
T 1blx_A          162 ----ADFGLARIY----------------------------------------------------------SFQM----A  175 (326)
T ss_dssp             ----CSCCSCCCC----------------------------------------------------------CGGG----G
T ss_pred             ----ecCcccccc----------------------------------------------------------cCCC----C
Confidence                778776510                                                          0000    0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      ...                          ..+++.+++||++....++.++||||+||++|||++ |..||...+..+.+
T Consensus       176 ~~~--------------------------~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~  228 (326)
T 1blx_A          176 LTS--------------------------VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQL  228 (326)
T ss_dssp             GCC--------------------------CCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHH
T ss_pred             ccc--------------------------cccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHH
Confidence            000                          113344556666777788999999999999999999 99999877655444


Q ss_pred             ccccccccc------------------------------CCC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        243 DRVQRGIIL------------------------------EKP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       243 ~~i~~~~~~------------------------------~~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+......                              ..+        +||..++..|+++.++|.+
T Consensus       229 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          229 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  297 (326)
T ss_dssp             HHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            333211000                              001        4788899999999999876

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=1.1e-19  Score=185.49  Aligned_cols=125  Identities=20%  Similarity=0.309  Sum_probs=92.6

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +++|.++++..    .+++..++.++.|++.||+|||++||+||||||+|||++.++           ..|+        
T Consensus       113 ~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-----------~~kl--------  169 (367)
T 1cm8_A          113 GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC-----------ELKI--------  169 (367)
T ss_dssp             SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----------CEEE--------
T ss_pred             CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCC-----------CEEE--------
Confidence            68999999873    368899999999999999999999999999999996665554           3355        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++..                                                          +..      
T Consensus       170 ----~Dfg~a~~~----------------------------------------------------------~~~------  181 (367)
T 1cm8_A          170 ----LDFGLARQA----------------------------------------------------------DSE------  181 (367)
T ss_dssp             ----CCCTTCEEC----------------------------------------------------------CSS------
T ss_pred             ----Eeeeccccc----------------------------------------------------------ccc------
Confidence                888887510                                                          000      


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc-ccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY-TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      .....++..|+|                          ||++.. ..|+.++|+||+||++|||++ |+.||.+.+..+.
T Consensus       182 ~~~~~~t~~y~a--------------------------PE~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~  234 (367)
T 1cm8_A          182 MTGYVVTRWYRA--------------------------PEVILNWMRYTQTVDIWSVGCIMAEMIT-GKTLFKGSDHLDQ  234 (367)
T ss_dssp             CCSSCSCGGGCC--------------------------THHHHTTTCCCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHH
T ss_pred             cCcCcCCCCcCC--------------------------HHHHhCCCCCChhhhHHHHHHHHHHHHh-CCCCCCCCCHHHH
Confidence            011124444544                          454444 578999999999999999999 9999987776544


Q ss_pred             cccc
Q psy17476        242 VDRV  245 (513)
Q Consensus       242 ~~~i  245 (513)
                      +..+
T Consensus       235 l~~i  238 (367)
T 1cm8_A          235 LKEI  238 (367)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4433

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.76  E-value=9.4e-20  Score=177.71  Aligned_cols=158  Identities=18%  Similarity=0.373  Sum_probs=110.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        93 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----------~~~l------  152 (276)
T 2h6d_A           93 VSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM-----------NAKI------  152 (276)
T ss_dssp             CCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTS-----------CEEE------
T ss_pred             cCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCC-----------CEEE------
Confidence            46899999998875   368889999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+++.-..                                                 .+.            
T Consensus       153 ------~dfg~~~~~~-------------------------------------------------~~~------------  165 (276)
T 2h6d_A          153 ------ADFGLSNMMS-------------------------------------------------DGE------------  165 (276)
T ss_dssp             ------CCCCGGGCCC-------------------------------------------------C--------------
T ss_pred             ------eecccccccC-------------------------------------------------CCc------------
Confidence                  7777765100                                                 000            


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccc-cccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRF-SSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                       ......|+..|+|||.                          +....+ +.++|+||+|+++|+|++ |..||...+..
T Consensus       166 -~~~~~~~~~~y~aPE~--------------------------~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~  217 (276)
T 2h6d_A          166 -FLRTSCGSPNYAAPEV--------------------------ISGRLYAGPEVDIWSCGVILYALLC-GTLPFDDEHVP  217 (276)
T ss_dssp             ------------CCTGG--------------------------GTTSCCCHHHHHHHHHHHHHHHHHH-SSCSSCCSSHH
T ss_pred             -ceecccCCccccCHHH--------------------------HcCCCCCCccchHHHHHHHHHHHHh-CCCCCCCCcHH
Confidence             0011124555555554                          443343 688999999999999999 99999887766


Q ss_pred             eeccccccccccCCC-----------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEKP-----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~p-----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++.+.+..+....+.           .||..++..||++.+++.+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          218 TLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             HHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             HHHHHhhcCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            666666543322111           4788899999999999875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.76  E-value=1.4e-19  Score=181.32  Aligned_cols=175  Identities=17%  Similarity=0.213  Sum_probs=98.8

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcc--eeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHN--YIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~--iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +|+|.+++.+.....++++..+..++.||+.||+|||+++  |+||||||+|||++.++           ..++      
T Consensus       117 ~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~-----------~~kl------  179 (337)
T 3ll6_A          117 KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQG-----------TIKL------  179 (337)
T ss_dssp             SEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTS-----------CEEB------
T ss_pred             CCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCC-----------CEEE------
Confidence            5899999988443335799999999999999999999999  99999999997666554           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-..-    .                                     ........... ..       
T Consensus       180 ------~Dfg~~~~~~~----~-------------------------------------~~~~~~~~~~~-~~-------  204 (337)
T 3ll6_A          180 ------CDFGSATTISH----Y-------------------------------------PDYSWSAQRRA-LV-------  204 (337)
T ss_dssp             ------CCCTTCBCCSS----C-------------------------------------C--------------------
T ss_pred             ------ecCccceeccc----c-------------------------------------Ccccccccccc-cc-------
Confidence                  77877651000    0                                     00000000000 00       


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+..|+|||.+...                       ....++.++|||||||++|||++ |..||.......
T Consensus       205 ~~~~~~~~t~~y~aPE~~~~~-----------------------~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~  260 (337)
T 3ll6_A          205 EEEITRNTTPMYRTPEIIDLY-----------------------SNFPIGEKQDIWALGCILYLLCF-RQHPFEDGAKLR  260 (337)
T ss_dssp             -------------------CC-----------------------TTSCSSHHHHHHHHHHHHHHHHH-SSCCC-------
T ss_pred             hhhccccCCCCcCChhhhhcc-----------------------ccCCCChHHhHHHHHHHHHHHHh-CCCCCcchhHHH
Confidence            000011244455555543210                       34567899999999999999999 999997655544


Q ss_pred             ecccccccccc-CC--------CCCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIIL-EK--------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~-~~--------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.......... ..        ..||..++..|+++.+++..
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          261 IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             -----CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            33322111100 00        14788999999999998875

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.76  E-value=7.6e-20  Score=192.18  Aligned_cols=55  Identities=11%  Similarity=0.100  Sum_probs=47.8

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .+|+|.+++....   .+++..++.++.||+.||+|||+++||||||||+|||++.++
T Consensus       139 ~~~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~  193 (458)
T 3rp9_A          139 ADSDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDC  193 (458)
T ss_dssp             CSEEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTC
T ss_pred             cccchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCC
Confidence            4689999998754   468999999999999999999999999999999996665554

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.76  E-value=3.1e-20  Score=186.15  Aligned_cols=163  Identities=23%  Similarity=0.366  Sum_probs=112.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       108 ~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~-----------~~kl------  168 (327)
T 3lxl_A          108 LPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA-----------HVKI------  168 (327)
T ss_dssp             CTTCBHHHHHHHHGGG--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT-----------EEEE------
T ss_pred             cCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCC-----------CEEE------
Confidence            4689999999986543  68899999999999999999999999999999996665554           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-                                                          ........
T Consensus       169 ------~Dfg~~~~----------------------------------------------------------~~~~~~~~  184 (327)
T 3lxl_A          169 ------ADFGLAKL----------------------------------------------------------LPLDKDYY  184 (327)
T ss_dssp             ------CCGGGCEE----------------------------------------------------------CCTTCSEE
T ss_pred             ------ccccccee----------------------------------------------------------cccCCccc
Confidence                  77877650                                                          00000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc--
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN--  238 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~--  238 (513)
                      .....                          ..+++.+++||++....++.++||||+||++|||++ |..||.....  
T Consensus       185 ~~~~~--------------------------~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~-g~~p~~~~~~~~  237 (327)
T 3lxl_A          185 VVREP--------------------------GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT-YCDKSCSPSAEF  237 (327)
T ss_dssp             ECSSC--------------------------CCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHT-TTCGGGSHHHHH
T ss_pred             eeecc--------------------------CCccccccCHHHhccCCCChHHhHHHHHHHHHHHHh-CCCCCccccchh
Confidence            00000                          113344566676777788999999999999999999 9999854332  


Q ss_pred             -------------ceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        239 -------------TEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       239 -------------~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                                   ..+...+..+.+.+.+            .||..++..||++.+++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          238 LRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                         1222333333333333            4789999999999998764

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.75  E-value=1.7e-19  Score=183.84  Aligned_cols=54  Identities=20%  Similarity=0.325  Sum_probs=47.7

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhc-ceeccccCcccccccC
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERH-NYIHRETKKSLYPSSL   57 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~-~iiHrdikp~N~~~~~   57 (513)
                      +|+|.+++.+.... ++++..+..++.||+.||+|||++ ||+||||||+|||++.
T Consensus       113 ~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~  167 (373)
T 1q8y_A          113 GENLLALIKKYEHR-GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI  167 (373)
T ss_dssp             CEEHHHHHHHTTTS-CCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEE
T ss_pred             CCCHHHHHHHhhcc-CCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEec
Confidence            78999999986543 478899999999999999999998 9999999999977654

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.75  E-value=2.5e-19  Score=178.14  Aligned_cols=160  Identities=18%  Similarity=0.268  Sum_probs=113.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.....  .+++..+..++.|++.||.|||++||+||||||+||+++.++           ..++      
T Consensus       106 ~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----------~~kl------  166 (314)
T 3com_A          106 CGAGSVSDIIRLRNK--TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEG-----------HAKL------  166 (314)
T ss_dssp             CTTEEHHHHHHHHTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-----------CEEE------
T ss_pred             CCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCC-----------CEEE------
Confidence            357899999986544  368899999999999999999999999999999996665554           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++..                                                          ......  
T Consensus       167 ------~dfg~~~~----------------------------------------------------------~~~~~~--  180 (314)
T 3com_A          167 ------ADFGVAGQ----------------------------------------------------------LTDTMA--  180 (314)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CBTTBS--
T ss_pred             ------eecccchh----------------------------------------------------------hhhhcc--
Confidence                  77777640                                                          000000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       .....                          .+++.+++||++....++.++|+||+||++|+|++ |..||...+...
T Consensus       181 -~~~~~--------------------------~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~  232 (314)
T 3com_A          181 -KRNTV--------------------------IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAE-GKPPYADIHPMR  232 (314)
T ss_dssp             -CBCCC--------------------------CSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHH-SSCTTTTSCHHH
T ss_pred             -ccCcc--------------------------CCCCCccChhhcCCCCCCccccHHHHHHHHHHHHh-CCCCCCCCChHH
Confidence             00001                          13444556666667788999999999999999999 999998766544


Q ss_pred             eccccccccccCC------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+........      +        .||..++..||++.++|.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          233 AIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH  279 (314)
T ss_dssp             HHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             HHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            4333322211111      1        5789999999999999876

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.75  E-value=1.3e-19  Score=178.44  Aligned_cols=163  Identities=21%  Similarity=0.304  Sum_probs=110.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++........+++..+..++.|++.||+|||+++|+||||||+||+++.+          ....++      
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~----------~~~~kl------  164 (295)
T 2clq_A          101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTY----------SGVLKI------  164 (295)
T ss_dssp             CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT----------TCCEEE------
T ss_pred             CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECC----------CCCEEE------
Confidence            4689999999987655556788999999999999999999999999999999665541          223344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          .....  
T Consensus       165 ------~Dfg~~~~~----------------------------------------------------------~~~~~--  178 (295)
T 2clq_A          165 ------SDFGTSKRL----------------------------------------------------------AGINP--  178 (295)
T ss_dssp             ------CCTTTCEES----------------------------------------------------------CC-----
T ss_pred             ------eeccccccc----------------------------------------------------------CCCCC--
Confidence                  778776500                                                          00000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccc--cccccCccccceeeeeeeeecCCCCCCCCCc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYT--RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN  238 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~  238 (513)
                       ......|+..|+|||                          ++...  .++.++|+||||+++|||++ |..||.....
T Consensus       179 -~~~~~~~~~~y~aPE--------------------------~~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~  230 (295)
T 2clq_A          179 -CTETFTGTLQYMAPE--------------------------IIDKGPRGYGKAADIWSLGCTIIEMAT-GKPPFYELGE  230 (295)
T ss_dssp             ---CCCCCCGGGCCHH--------------------------HHHHGGGGCSHHHHHHHHHHHHHHHHH-TSCTTGGGSS
T ss_pred             -cccccCCCccccChh--------------------------hhcCCCCCCCcHHHHHHHHHHHHHHHH-CCCCccCCCc
Confidence             001112445555554                          44332  37889999999999999999 9999975443


Q ss_pred             cee-cccc-ccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        239 TEV-VDRV-QRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       239 ~~~-~~~i-~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ... .... .....+..+            .||..++..||++.++|.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          231 PQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD  279 (295)
T ss_dssp             HHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred             hhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            221 1111 111111111            5899999999999999976

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.75  E-value=2.5e-19  Score=176.75  Aligned_cols=164  Identities=20%  Similarity=0.311  Sum_probs=115.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++.   .+++..+..++.|++.||+|||++||+||||||+||+++.++           ..++      
T Consensus       106 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----------~~kl------  165 (298)
T 1phk_A          106 MKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM-----------NIKL------  165 (298)
T ss_dssp             CTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----------CEEE------
T ss_pred             cCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCC-----------cEEE------
Confidence            46899999998864   468999999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++..                                                          .....   
T Consensus       166 ------~dfg~~~~----------------------------------------------------------~~~~~---  178 (298)
T 1phk_A          166 ------TDFGFSCQ----------------------------------------------------------LDPGE---  178 (298)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCTTC---
T ss_pred             ------ecccchhh----------------------------------------------------------cCCCc---
Confidence                  77776640                                                          00000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|||.+.....                    -....++.++|+||+|+++|||++ |..||...+..+
T Consensus       179 -~~~~~~~~~~y~aPE~~~~~~~--------------------~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~  236 (298)
T 1phk_A          179 -KLREVCGTPSYLAPEIIECSMN--------------------DNHPGYGKEVDMWSTGVIMYTLLA-GSPPFWHRKQML  236 (298)
T ss_dssp             -CBCCCCSCGGGCCHHHHHHHHC--------------------TTSCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -ccccccCCccccCHHHhccccc--------------------cccccCCcccccHhHHHHHHHHHH-CCCCCcCccHHH
Confidence             0011225556666655421100                    013457889999999999999999 999998777666


Q ss_pred             ecccccccccc-CCC--------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIIL-EKP--------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~-~~p--------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+... +.+              .||..++..|+++.++|.+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (298)
T 1phk_A          237 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  284 (298)
T ss_dssp             HHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence            66555433221 111              4788899999999999875

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.75  E-value=1.2e-19  Score=176.35  Aligned_cols=164  Identities=28%  Similarity=0.412  Sum_probs=109.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcc---eeccccCcccccccCccccccccCCccCCCceEEE
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHN---YIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVA   77 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~---iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~   77 (513)
                      +++|+|.+++.+.    .+++..+..++.|++.||+|||+++   |+||||||+||+++.+....   .......++   
T Consensus        88 ~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~---~~~~~~~kl---  157 (271)
T 3dtc_A           88 ARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENG---DLSNKILKI---  157 (271)
T ss_dssp             CTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSS---CCSSCCEEE---
T ss_pred             CCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccc---cccCcceEE---
Confidence            4689999998643    3688999999999999999999999   99999999997665431000   001222344   


Q ss_pred             eccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCC
Q psy17476         78 LYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ  157 (513)
Q Consensus        78 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  157 (513)
                               .|||+++..                                                          ... 
T Consensus       158 ---------~Dfg~~~~~----------------------------------------------------------~~~-  169 (271)
T 3dtc_A          158 ---------TDFGLAREW----------------------------------------------------------HRT-  169 (271)
T ss_dssp             ---------CCCCC------------------------------------------------------------------
T ss_pred             ---------ccCCccccc----------------------------------------------------------ccc-
Confidence                     677766410                                                          000 


Q ss_pred             ccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCC
Q psy17476        158 EHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK  237 (513)
Q Consensus       158 ~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~  237 (513)
                          ......|+.                          .+++||++....++.++|+||+|+++|||++ |..||...+
T Consensus       170 ----~~~~~~~~~--------------------------~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~  218 (271)
T 3dtc_A          170 ----TKMSAAGAY--------------------------AWMAPEVIRASMFSKGSDVWSYGVLLWELLT-GEVPFRGID  218 (271)
T ss_dssp             ----------CCG--------------------------GGSCHHHHHHCCCSHHHHHHHHHHHHHHHHH-CCCTTTTSC
T ss_pred             ----cccCCCCcc--------------------------ceeCHHHhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Confidence                000111344                          4455566666678999999999999999999 999998877


Q ss_pred             cceecccccc-ccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 NTEVVDRVQR-GIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ~~~~~~~i~~-~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .......+.. ....+.+            .||..++..||++.+++..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          219 GLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             HHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            6555544432 2222222            4788899999999988764

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.75  E-value=5.9e-20  Score=182.49  Aligned_cols=56  Identities=21%  Similarity=0.260  Sum_probs=47.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++....   ++++..+..++.|++.||+|||++||+||||||+||+++.++
T Consensus        84 ~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~  139 (311)
T 4agu_A           84 CDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHS  139 (311)
T ss_dssp             CSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCC
Confidence            45778888877654   468899999999999999999999999999999996665544

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.75  E-value=1.4e-19  Score=179.93  Aligned_cols=160  Identities=14%  Similarity=0.184  Sum_probs=105.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       116 ~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~-----------~~kl------  175 (309)
T 2h34_A          116 INGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADD-----------FAYL------  175 (309)
T ss_dssp             CCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-----------CEEE------
T ss_pred             cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCC-----------CEEE------
Confidence            46789999999865   468899999999999999999999999999999996665554           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||++++-..-                                                          ..  .
T Consensus       176 ------~Dfg~~~~~~~----------------------------------------------------------~~--~  189 (309)
T 2h34_A          176 ------VDFGIASATTD----------------------------------------------------------EK--L  189 (309)
T ss_dssp             ------CSCCC---------------------------------------------------------------------
T ss_pred             ------ecCccCccccc----------------------------------------------------------cc--c
Confidence                  77877651000                                                          00  0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+..|                          ++||++....++.++|+||||+++|||++ |..||...+...
T Consensus       190 ~~~~~~~~~~~y--------------------------~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~  242 (309)
T 2h34_A          190 TQLGNTVGTLYY--------------------------MAPERFSESHATYRADIYALTCVLYECLT-GSPPYQGDQLSV  242 (309)
T ss_dssp             -------CCGGG--------------------------CCGGGTCC----CCCHHHHHHHHHHHHHH-SSCSSCSCHHHH
T ss_pred             ccccccCCCcCc--------------------------cCHHHHcCCCCCchHhHHHHHHHHHHHHH-CCCCCCCchHHH
Confidence            000011244444                          45555555678999999999999999999 999998766544


Q ss_pred             eccccccccccC------CC--------CCcCCCCCCHH-HHHHHHcC
Q psy17476        241 VVDRVQRGIILE------KP--------KAWYVGDMSRQ-RAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~------~p--------~~w~~~~~~R~-~aeeLL~~  273 (513)
                      +...+......+      .|        .||..++..|+ ++++++..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~  290 (309)
T 2h34_A          243 MGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAA  290 (309)
T ss_dssp             HHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHH
T ss_pred             HHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHH
Confidence            333333221111      11        57888888888 77777653

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.75  E-value=7.9e-20  Score=188.97  Aligned_cols=53  Identities=19%  Similarity=0.312  Sum_probs=43.8

Q ss_pred             CCcHHHHHHhcC------CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccc
Q psy17476          3 HGSLLNYLRRHE------NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPS   55 (513)
Q Consensus         3 ~g~L~~~l~~~~------~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~   55 (513)
                      +|+|.+++..+.      ....+++..++.++.||+.||+|||+++||||||||+|||+
T Consensus       103 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll  161 (405)
T 3rgf_A          103 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILV  161 (405)
T ss_dssp             SEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred             CCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEE
Confidence            578988887532      12247899999999999999999999999999999999665

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.75  E-value=1.2e-19  Score=183.65  Aligned_cols=55  Identities=16%  Similarity=0.176  Sum_probs=46.9

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++..+..  .+++..+..++.|++.||+|||+++|+||||||+|||++.++
T Consensus        95 ~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~  149 (346)
T 1ua2_A           95 ETDLEVIIKDNSL--VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG  149 (346)
T ss_dssp             SEEHHHHHTTCCS--SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             CCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCC
Confidence            4689999887654  358889999999999999999999999999999996665554

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.75  E-value=2.1e-19  Score=177.79  Aligned_cols=160  Identities=16%  Similarity=0.200  Sum_probs=112.1

Q ss_pred             CcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccccc
Q psy17476          4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKA   83 (513)
Q Consensus         4 g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   83 (513)
                      |+|.+++...... .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++         
T Consensus        92 ~~l~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~-----------~~kl---------  150 (305)
T 2wtk_C           92 CGMQEMLDSVPEK-RFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGG-----------TLKI---------  150 (305)
T ss_dssp             EEHHHHHHHSTTC-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----------CEEE---------
T ss_pred             CCHHHHHHhCccc-ccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCC-----------cEEe---------
Confidence            4588888875433 478999999999999999999999999999999996665544           3344         


Q ss_pred             cCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceee
Q psy17476         84 IEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKV  163 (513)
Q Consensus        84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  163 (513)
                         .||+++...                                                          ..... -...
T Consensus       151 ---~dfg~~~~~----------------------------------------------------------~~~~~-~~~~  168 (305)
T 2wtk_C          151 ---SALGVAEAL----------------------------------------------------------HPFAA-DDTC  168 (305)
T ss_dssp             ---CCCTTCEEC----------------------------------------------------------CTTCS-SCEE
T ss_pred             ---ecccccccc----------------------------------------------------------Ccccc-cccc
Confidence               777776400                                                          00000 0000


Q ss_pred             ecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccc--cccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        164 KDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYT--RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       164 ~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      ....|+..|+|||                          ++...  .++.++||||+||++|||++ |..||...+..++
T Consensus       169 ~~~~~~~~y~aPE--------------------------~~~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~  221 (305)
T 2wtk_C          169 RTSQGSPAFQPPE--------------------------IANGLDTFSGFKVDIWSAGVTLYNITT-GLYPFEGDNIYKL  221 (305)
T ss_dssp             CCCCSCGGGCCHH--------------------------HHTCCSCEESHHHHHHHHHHHHHHHHH-SSCSCCCSSHHHH
T ss_pred             ccCCCCCCCcChh--------------------------hccCcccCCcchhhHHHHHHHHHHHHh-CCCCCCCchHHHH
Confidence            1122455555554                          44332  24778999999999999999 9999998777776


Q ss_pred             ccccccccccCCC-----------CCcCCCCCCHHHHHHHHcC
Q psy17476        242 VDRVQRGIILEKP-----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       242 ~~~i~~~~~~~~p-----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ...+.++.....+           .||..++..|+++.+++.+
T Consensus       222 ~~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          222 FENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             HHHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             HHHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            6666544322221           5789999999999999976

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.75  E-value=2.1e-19  Score=177.39  Aligned_cols=167  Identities=17%  Similarity=0.268  Sum_probs=109.9

Q ss_pred             CCCCcHHHHHHhcC-----CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceE
Q psy17476          1 MRHGSLLNYLRRHE-----NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVV   75 (513)
Q Consensus         1 ~~~g~L~~~l~~~~-----~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~   75 (513)
                      +++|+|.+++....     ....+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++ 
T Consensus        95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----------~~kl-  162 (303)
T 2vwi_A           95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG-----------SVQI-  162 (303)
T ss_dssp             CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTC-----------CEEE-
T ss_pred             ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCC-----------CEEE-
Confidence            46899999998621     122478999999999999999999999999999999996665543           3344 


Q ss_pred             EEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeec
Q psy17476         76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDD  155 (513)
Q Consensus        76 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  155 (513)
                                 .|||++.-...                                                 +....    
T Consensus       163 -----------~dfg~~~~~~~-------------------------------------------------~~~~~----  178 (303)
T 2vwi_A          163 -----------ADFGVSAFLAT-------------------------------------------------GGDIT----  178 (303)
T ss_dssp             -----------CCCHHHHHCC-----------------------------------------------------------
T ss_pred             -----------Eeccchheecc-------------------------------------------------CCCcc----
Confidence                       77777641000                                                 00000    


Q ss_pred             CCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc-ccccccCccccceeeeeeeeecCCCCCC
Q psy17476        156 TQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY-TRFSSKSDVWAYGVLMWEVFTCGKMPYG  234 (513)
Q Consensus       156 ~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~Dvws~G~~l~el~t~g~~pf~  234 (513)
                         .........|+..|+|                          ||++.. ..++.++|+||+||++|||++ |..||.
T Consensus       179 ---~~~~~~~~~~~~~y~a--------------------------PE~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~  228 (303)
T 2vwi_A          179 ---RNKVRKTFVGTPCWMA--------------------------PEVMEQVRGYDFKADIWSFGITAIELAT-GAAPYH  228 (303)
T ss_dssp             ------------CCCTTCC--------------------------HHHHHHHHCCCTHHHHHHHHHHHHHHHH-SSCTTT
T ss_pred             ---chhhhcccCCCccccC--------------------------HHHhccccCCCchhhHHHHHHHHHHHHh-CCCCCc
Confidence               0000011124444444                          454443 357899999999999999999 999998


Q ss_pred             CCCcceeccccccccccC---------------------CCCCcCCCCCCHHHHHHHHcC
Q psy17476        235 RLKNTEVVDRVQRGIILE---------------------KPKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~---------------------~p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+..+............                     ...||..++..||++.+++.+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  288 (303)
T 2vwi_A          229 KYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH  288 (303)
T ss_dssp             TSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             cCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            766544433222111111                     014799999999999999986

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.75  E-value=1e-19  Score=179.92  Aligned_cols=165  Identities=16%  Similarity=0.220  Sum_probs=114.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..+..++.|++.||.|||+++|+||||||+||+++.++           ..++      
T Consensus        98 ~~~~~l~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----------~~kl------  158 (302)
T 2j7t_A           98 CPGGAVDAIMLELDRG--LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG-----------DIRL------  158 (302)
T ss_dssp             CTTEEHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHhhccC--CCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCC-----------CEEE------
Confidence            4689999999886543  68899999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++....-                                                         .    .
T Consensus       159 ------~Dfg~~~~~~~---------------------------------------------------------~----~  171 (302)
T 2j7t_A          159 ------ADFGVSAKNLK---------------------------------------------------------T----L  171 (302)
T ss_dssp             ------CCCHHHHHHHH---------------------------------------------------------H----H
T ss_pred             ------EECCCCccccc---------------------------------------------------------c----c
Confidence                  77776530000                                                         0    0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......|+..|+|||.+...                     ......++.++|+|||||++|||++ |..||...+..+
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~---------------------~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~  229 (302)
T 2j7t_A          172 QKRDSFIGTPYWMAPEVVMCE---------------------TMKDTPYDYKADIWSLGITLIEMAQ-IEPPHHELNPMR  229 (302)
T ss_dssp             HC-----CCGGGCCHHHHHHH---------------------HTTSTTTTTHHHHHHHHHHHHHHHH-SSCTTTTSCHHH
T ss_pred             cccccccCChhhcCCeeeccc---------------------cCCCCCCchhhhHHHHHHHHHHHhc-CCCCCccCCHHH
Confidence            000011255555555543210                     0134567899999999999999999 999998877655


Q ss_pred             eccccccccccCC--C------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK--P------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~--p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+.....+..  +            .||..++..||++.+++.+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          230 VLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH  276 (302)
T ss_dssp             HHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred             HHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            5544433322211  1            4788999999999999986

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.75  E-value=4.9e-19  Score=177.68  Aligned_cols=55  Identities=22%  Similarity=0.317  Sum_probs=47.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhc--------ceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERH--------NYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~--------~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++++.    .+++..+..++.|++.||+|||++        +||||||||+|||++.++
T Consensus       117 ~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~  179 (337)
T 3mdy_A          117 HENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG  179 (337)
T ss_dssp             CTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred             cCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCC
Confidence            4689999999775    368899999999999999999999        999999999996665543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.74  E-value=9.1e-20  Score=187.99  Aligned_cols=55  Identities=25%  Similarity=0.259  Sum_probs=49.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPS   55 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~   55 (513)
                      +++|+|.+++.+.....++++..++.++.|++.||+|||+++|+||||||+|||+
T Consensus        91 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll  145 (396)
T 4eut_A           91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMR  145 (396)
T ss_dssp             CTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             CCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEE
Confidence            4689999999987655457999999999999999999999999999999999654

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.74  E-value=2.4e-19  Score=186.28  Aligned_cols=55  Identities=15%  Similarity=0.114  Sum_probs=43.8

Q ss_pred             CcHHHHHHhc-CCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          4 GSLLNYLRRH-ENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         4 g~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      |+|.+++... .....+++..++.++.||+.||+|||+++|+||||||+|||++.+
T Consensus       137 ~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~  192 (420)
T 1j1b_A          137 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD  192 (420)
T ss_dssp             EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETT
T ss_pred             ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCC
Confidence            5677776642 112247889999999999999999999999999999999666543

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.74  E-value=8.7e-20  Score=182.29  Aligned_cols=161  Identities=27%  Similarity=0.452  Sum_probs=110.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..    +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       117 ~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~-----------~~kl------  175 (318)
T 3lxp_A          117 VPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDR-----------LVKI------  175 (318)
T ss_dssp             CTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----------CEEE------
T ss_pred             ccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCC-----------CEEE------
Confidence            46899999998753    68889999999999999999999999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.                                                          ........
T Consensus       176 ------~Dfg~a~~----------------------------------------------------------~~~~~~~~  191 (318)
T 3lxp_A          176 ------GDFGLAKA----------------------------------------------------------VPEGHEYY  191 (318)
T ss_dssp             ------CCGGGCEE----------------------------------------------------------CCTTCSEE
T ss_pred             ------CCcccccc----------------------------------------------------------cccccccc
Confidence                  78887650                                                          00000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc-
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT-  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~-  239 (513)
                      .......                          +++.+++||++....++.++||||+||++|||++ |..||...... 
T Consensus       192 ~~~~~~~--------------------------~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~-g~~p~~~~~~~~  244 (318)
T 3lxp_A          192 RVREDGD--------------------------SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKF  244 (318)
T ss_dssp             EC---CC--------------------------CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT-TTCGGGSHHHHH
T ss_pred             ccccCCC--------------------------CCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHh-CCCcccccchhh
Confidence            0000011                          2334556666777788999999999999999999 99998643221 


Q ss_pred             --------------eeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 --------------EVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 --------------~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                                    ++...+..+.+.+.+            .||..++..||++.+++..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  304 (318)
T 3lxp_A          245 LELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPI  304 (318)
T ss_dssp             HHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                          122233333333333            4788999999999888753

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.74  E-value=8.4e-20  Score=183.35  Aligned_cols=53  Identities=15%  Similarity=0.315  Sum_probs=46.6

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      .|+|.+++.++.   .+++..++.++.||+.||+|||+++|+||||||+|||++.+
T Consensus       116 ~~~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~  168 (329)
T 3gbz_A          116 ENDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVS  168 (329)
T ss_dssp             SEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-
T ss_pred             CCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecC
Confidence            479999998875   36889999999999999999999999999999999776543

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.74  E-value=2.7e-19  Score=184.40  Aligned_cols=53  Identities=15%  Similarity=0.112  Sum_probs=41.5

Q ss_pred             CcHHHHHHh-cCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCccccccc
Q psy17476          4 GSLLNYLRR-HENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSS   56 (513)
Q Consensus         4 g~L~~~l~~-~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~   56 (513)
                      |+|.+.+.. ......+++..++.++.|++.||+|||++||+||||||+|||++
T Consensus       122 ~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~  175 (394)
T 4e7w_A          122 ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD  175 (394)
T ss_dssp             EEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred             ccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEc
Confidence            455554443 11122468899999999999999999999999999999996665

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.74  E-value=1e-19  Score=185.69  Aligned_cols=125  Identities=18%  Similarity=0.313  Sum_probs=83.2

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.++++..    .+++..++.++.||+.||+|||++||+||||||+|||++.++           ..++        
T Consensus       117 ~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~-----------~~kL--------  173 (367)
T 2fst_X          117 GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----------ELKI--------  173 (367)
T ss_dssp             CEECC-----C----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-----------CEEE--------
T ss_pred             CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCC-----------CEEE--------
Confidence            68899988763    368999999999999999999999999999999996665553           3355        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++...                                                          .      .
T Consensus       174 ----~DFG~a~~~~----------------------------------------------------------~------~  185 (367)
T 2fst_X          174 ----LDFGLARHTA----------------------------------------------------------D------E  185 (367)
T ss_dssp             ----CC--------------------------------------------------------------------------
T ss_pred             ----eecccccccc----------------------------------------------------------c------c
Confidence                7888875100                                                          0      0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc-ccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY-TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      .....|+..|+|                          ||++.. ..|+.++||||+||++|||++ |+.||.+.+..+.
T Consensus       186 ~~~~~~t~~y~a--------------------------PE~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~  238 (367)
T 2fst_X          186 MTGYVATRWYRA--------------------------PEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQ  238 (367)
T ss_dssp             -----CCCTTCC--------------------------HHHHTTCCSCCTTHHHHHHHHHHHHHHH-SSCSCCCSSHHHH
T ss_pred             CCCcCcCcCccC--------------------------hHHHcCCcCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHH
Confidence            001124444444                          554444 578999999999999999999 9999988776554


Q ss_pred             cccc
Q psy17476        242 VDRV  245 (513)
Q Consensus       242 ~~~i  245 (513)
                      +..+
T Consensus       239 l~~i  242 (367)
T 2fst_X          239 LKLI  242 (367)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4433

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.74  E-value=1.5e-19  Score=177.37  Aligned_cols=163  Identities=18%  Similarity=0.250  Sum_probs=104.1

Q ss_pred             CCcHHHHHHhc-CCCCCCchhHHHHHHHHHHHHHHHHHhc-ceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          3 HGSLLNYLRRH-ENTLGGNVGLLLDMCIQVCKGMAYLERH-NYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         3 ~g~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~gl~ylH~~-~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      .|+|.+++... .....+++..++.++.|++.||+|||++ +|+||||||+||+++.++           ..++      
T Consensus        89 ~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~-----------~~kl------  151 (290)
T 3fme_A           89 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG-----------QVKM------  151 (290)
T ss_dssp             SEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTC-----------CEEB------
T ss_pred             ccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC-----------CEEE------
Confidence            47898888762 1122478999999999999999999998 999999999996665543           3344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-..                                                          ...   
T Consensus       152 ------~Dfg~~~~~~----------------------------------------------------------~~~---  164 (290)
T 3fme_A          152 ------CDFGISGYLV----------------------------------------------------------DDV---  164 (290)
T ss_dssp             ------CCC-----------------------------------------------------------------------
T ss_pred             ------eecCCccccc----------------------------------------------------------ccc---
Confidence                  7888765100                                                          000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc-c
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-T  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~-~  239 (513)
                       ......|+..|+|||.+...                      .....++.++|+||+||++|||++ |..||..... .
T Consensus       165 -~~~~~~~t~~y~aPE~~~~~----------------------~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~  220 (290)
T 3fme_A          165 -AKDIDAGCKPYMAPERINPE----------------------LNQKGYSVKSDIWSLGITMIELAI-LRFPYDSWGTPF  220 (290)
T ss_dssp             ------CCCCCCSCHHHHSCC----------------------TTC--CCHHHHHHHHHHHHHHHHH-TSCSSCCCSCHH
T ss_pred             -cccccCCCccccChhhcChh----------------------hcCcCCCcHHHHHHHHHHHHHHHH-CCCCccccCchH
Confidence             00111255556665553211                      134567899999999999999999 9999975432 2


Q ss_pred             eecc-ccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVD-RVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~-~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .... .+........+            .||..++..||++.+++.+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          221 QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH  267 (290)
T ss_dssp             HHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence            2222 22222111111            4788899999999999875

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.74  E-value=1.9e-19  Score=182.90  Aligned_cols=56  Identities=29%  Similarity=0.351  Sum_probs=48.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhc-ceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERH-NYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~-~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus       113 ~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~  169 (360)
T 3eqc_A          113 MDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG  169 (360)
T ss_dssp             CTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTC
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCC
Confidence            46899999998875   368899999999999999999996 999999999996666554

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.74  E-value=2e-19  Score=183.68  Aligned_cols=126  Identities=17%  Similarity=0.190  Sum_probs=89.1

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .|+|.+++..     .+++..+..++.|++.||+|||++||+||||||+|||++.++           ..|+        
T Consensus       113 ~~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~-----------~~kl--------  168 (371)
T 2xrw_A          113 DANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-----------TLKI--------  168 (371)
T ss_dssp             SEEHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-----------CEEE--------
T ss_pred             CCCHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCC-----------CEEE--------
Confidence            4788888863     358889999999999999999999999999999996665543           3355        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++...                                                          ...    .
T Consensus       169 ----~Dfg~a~~~~----------------------------------------------------------~~~----~  182 (371)
T 2xrw_A          169 ----LDFGLARTAG----------------------------------------------------------TSF----M  182 (371)
T ss_dssp             ----CCCCC-----------------------------------------------------------------------
T ss_pred             ----EEeecccccc----------------------------------------------------------ccc----c
Confidence                7888775100                                                          000    0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcceec
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVV  242 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~  242 (513)
                      .....                          +++.++|||++....|+.++||||+||++|||++ |..||...+..+.+
T Consensus       183 ~~~~~--------------------------gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~  235 (371)
T 2xrw_A          183 MTPYV--------------------------VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPGTDHIDQW  235 (371)
T ss_dssp             ---------------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHH
T ss_pred             cCCce--------------------------ecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Confidence            00011                          3344556666777788999999999999999999 99999877665444


Q ss_pred             ccc
Q psy17476        243 DRV  245 (513)
Q Consensus       243 ~~i  245 (513)
                      ..+
T Consensus       236 ~~i  238 (371)
T 2xrw_A          236 NKV  238 (371)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            333

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.74  E-value=2.7e-19  Score=174.36  Aligned_cols=161  Identities=17%  Similarity=0.275  Sum_probs=107.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++....   .+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus        87 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----------~~kl------  146 (276)
T 2yex_A           87 CSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----------NLKI------  146 (276)
T ss_dssp             CTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----------CEEE------
T ss_pred             cCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCC-----------CEEE------
Confidence            35789999987643   468899999999999999999999999999999996665544           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++.-..                                                          ..... 
T Consensus       147 ------~dfg~~~~~~----------------------------------------------------------~~~~~-  161 (276)
T 2yex_A          147 ------SDFGLATVFR----------------------------------------------------------YNNRE-  161 (276)
T ss_dssp             ------CCCTTCEECE----------------------------------------------------------ETTEE-
T ss_pred             ------eeCCCccccC----------------------------------------------------------CCcch-
Confidence                  7777764100                                                          00000 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccc-cccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRF-SSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                      .......|+..|+|||                          ++....+ +.++|+||+||++|||++ |..||......
T Consensus       162 ~~~~~~~~~~~y~aPE--------------------------~~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~  214 (276)
T 2yex_A          162 RLLNKMCGTLPYVAPE--------------------------LLKRREFHAEPVDVWSCGIVLTAMLA-GELPWDQPSDS  214 (276)
T ss_dssp             CCBCCCCSCGGGCCGG--------------------------GGTCSSBCHHHHHHHHHHHHHHHHHH-SSCCCSCSCTT
T ss_pred             hcccCCccccCccChH--------------------------HHhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCchH
Confidence            0001122444555554                          4444444 778999999999999999 99999765542


Q ss_pred             e-eccccccc-cccCC----C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 E-VVDRVQRG-IILEK----P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~-~~~~i~~~-~~~~~----p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      . ....+... ...+.    +        .||..++..|+++.+++.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (276)
T 2yex_A          215 CQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (276)
T ss_dssp             SHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence            2 12212111 11111    1        5788999999999999886

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.74  E-value=4.6e-19  Score=176.40  Aligned_cols=170  Identities=16%  Similarity=0.224  Sum_probs=107.6

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .+|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+||+++.            ...++       
T Consensus       110 ~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~------------~~~kL-------  167 (313)
T 3cek_A          110 GNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD------------GMLKL-------  167 (313)
T ss_dssp             CSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET------------TEEEE-------
T ss_pred             CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC------------CeEEE-------
Confidence            5789999999865   4688899999999999999999999999999999965532            12344       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .|||+++...-                                                 ..          ...
T Consensus       168 -----~Dfg~~~~~~~-------------------------------------------------~~----------~~~  183 (313)
T 3cek_A          168 -----IDFGIANQMQP-------------------------------------------------DT----------TSV  183 (313)
T ss_dssp             -----CCCSSSCC-------------------------------------------------------------------
T ss_pred             -----eeccccccccC-------------------------------------------------cc----------ccc
Confidence                 77777651000                                                 00          000


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc-e
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT-E  240 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~-~  240 (513)
                      ......|+..|+|||.+.....-.               ........++.++|||||||++|||++ |..||...... .
T Consensus       184 ~~~~~~gt~~y~aPE~~~~~~~~~---------------~~~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~~~~~  247 (313)
T 3cek_A          184 VKDSQVGTVNYMPPEAIKDMSSSR---------------ENGKSKSKISPKSDVWSLGCILYYMTY-GKTPFQQIINQIS  247 (313)
T ss_dssp             ------CCGGGCCHHHHTTCC-------------------------CCCHHHHHHHHHHHHHHHHH-SSCTTTTCCSHHH
T ss_pred             cccCCCCCCCcCCHHHHhhccccc---------------ccccccccCCchHHHHHHHHHHHHHHh-CCCchhhHHHHHH
Confidence            001123566666666543210000               000011367889999999999999999 99999765331 1


Q ss_pred             ec-cccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VV-DRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~-~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .. ..+........+            .||..++..|+++.++|.+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          248 KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            11 112222222111            5799999999999999986

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.74  E-value=2.8e-19  Score=178.71  Aligned_cols=164  Identities=19%  Similarity=0.275  Sum_probs=111.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++..+.   .+++..++.++.||+.||+|||+++|+||||||+||+++.++.        ....++      
T Consensus        96 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~--------~~~~kl------  158 (322)
T 2ycf_A           96 MEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE--------DCLIKI------  158 (322)
T ss_dssp             CTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSS--------SCCEEE------
T ss_pred             CCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCC--------CCeEEE------
Confidence            46889999998754   4688999999999999999999999999999999976655431        112344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-                                                          .....   
T Consensus       159 ------~Dfg~~~~----------------------------------------------------------~~~~~---  171 (322)
T 2ycf_A          159 ------TDFGHSKI----------------------------------------------------------LGETS---  171 (322)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCCCH---
T ss_pred             ------ccCcccee----------------------------------------------------------ccccc---
Confidence                  77877650                                                          00000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc-
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT-  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~-  239 (513)
                       ......|+..|+|||.+..                       .....++.++|||||||++|||++ |..||...... 
T Consensus       172 -~~~~~~gt~~y~aPE~~~~-----------------------~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~  226 (322)
T 2ycf_A          172 -LMRTLCGTPTYLAPEVLVS-----------------------VGTAGYNRAVDCWSLGVILFICLS-GYPPFSEHRTQV  226 (322)
T ss_dssp             -HHHHHHSCCTTCCHHHHHH-----------------------TTTTTCTTHHHHHHHHHHHHHHHH-SSCSSCSTTCSS
T ss_pred             -ccccccCCcCccCchhhcc-----------------------CCCCCCCchhhHHHHHHHHHHHHh-CCCCCcccchHH
Confidence             0001124445555443311                       123567899999999999999999 99999765543 


Q ss_pred             eeccccccccccCC-------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRGIILEK-------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~~~~~~-------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+...+..+.....       +        .||..++..|+++.++|.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h  275 (322)
T 2ycf_A          227 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  275 (322)
T ss_dssp             CHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence            33344433322211       1        5788999999999999976

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.73  E-value=1.3e-19  Score=181.59  Aligned_cols=163  Identities=27%  Similarity=0.456  Sum_probs=111.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+....  +++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++      
T Consensus       126 ~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~-----------~~kL------  186 (326)
T 2w1i_A          126 LPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----------RVKI------  186 (326)
T ss_dssp             CTTCBHHHHHHHSTTS--SCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT-----------EEEE------
T ss_pred             CCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCC-----------cEEE------
Confidence            4689999999987543  58889999999999999999999999999999996665543           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-                                                          .... ...
T Consensus       187 ------~Dfg~~~~----------------------------------------------------------~~~~-~~~  201 (326)
T 2w1i_A          187 ------GDFGLTKV----------------------------------------------------------LPQD-KEY  201 (326)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCSS-CSE
T ss_pred             ------ecCcchhh----------------------------------------------------------cccc-ccc
Confidence                  77877650                                                          0000 000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc--
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN--  238 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~--  238 (513)
                      .....                         ...+.+.++|||++....++.++|||||||++|||+| |..|+.....  
T Consensus       202 ~~~~~-------------------------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t-g~~~~~~~~~~~  255 (326)
T 2w1i_A          202 YKVKE-------------------------PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPPAEF  255 (326)
T ss_dssp             EECSS-------------------------CCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHH-TTCGGGSHHHHH
T ss_pred             ccccc-------------------------CCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHh-cCCCCCCCHHHH
Confidence            00000                         0012334566777777788999999999999999999 9888753210  


Q ss_pred             --------------ceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        239 --------------TEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       239 --------------~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                                    ..+.+.+..+.+++.+            .||..++..||++.+++..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~  316 (326)
T 2w1i_A          256 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR  316 (326)
T ss_dssp             HHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                          0122333333333333            5788999999999888753

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.73  E-value=4.1e-19  Score=182.22  Aligned_cols=54  Identities=13%  Similarity=0.166  Sum_probs=44.4

Q ss_pred             CCcHHHHHHhc-CCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCccccccc
Q psy17476          3 HGSLLNYLRRH-ENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSS   56 (513)
Q Consensus         3 ~g~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~   56 (513)
                      .|+|.+++... .....+++..++.++.|++.||+|||++||+||||||+|||++
T Consensus       121 ~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~  175 (383)
T 3eb0_A          121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN  175 (383)
T ss_dssp             SEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEE
T ss_pred             CccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEc
Confidence            36888887752 1122478999999999999999999999999999999996664

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.73  E-value=4.5e-19  Score=184.98  Aligned_cols=54  Identities=11%  Similarity=0.087  Sum_probs=47.4

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +|+|.++++...   .+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus       113 ~~~L~~~~~~~~---~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~  166 (432)
T 3n9x_A          113 DSDLKKLFKTPI---FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDC  166 (432)
T ss_dssp             SEEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             CcCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCC
Confidence            589999998754   468999999999999999999999999999999996665554

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.73  E-value=1.2e-18  Score=172.45  Aligned_cols=56  Identities=14%  Similarity=0.203  Sum_probs=49.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccC
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSL   57 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~   57 (513)
                      +++|+|.+++.++... ++++..++.++.|++.||+|||+++|+||||||+||+++.
T Consensus        97 ~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  152 (299)
T 3m2w_A           97 LDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTS  152 (299)
T ss_dssp             CCSCBHHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESS
T ss_pred             cCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEec
Confidence            4689999999986543 4799999999999999999999999999999999966655

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.73  E-value=3.3e-19  Score=174.37  Aligned_cols=158  Identities=18%  Similarity=0.252  Sum_probs=107.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+.... .+++..+..++.|++.||.|||+++|+||||||+||+++.++           ..++      
T Consensus       102 ~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----------~~kl------  163 (284)
T 2a19_B          102 CDKGTLEQWIEKRRGE-KLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK-----------QVKI------  163 (284)
T ss_dssp             CCSCBHHHHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT-----------EEEE------
T ss_pred             cCCCCHHHHHhhccCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCC-----------CEEE------
Confidence            4678999999876432 478999999999999999999999999999999996665543           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          ....   
T Consensus       164 ------~Dfg~~~~~----------------------------------------------------------~~~~---  176 (284)
T 2a19_B          164 ------GDFGLVTSL----------------------------------------------------------KNDG---  176 (284)
T ss_dssp             ------CCCTTCEES----------------------------------------------------------SCCS---
T ss_pred             ------Ccchhheec----------------------------------------------------------cccc---
Confidence                  777776500                                                          0000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......                          +++.+++||++....++.++|+|||||++|||++ |..|+....  .
T Consensus       177 -~~~~~~--------------------------~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-~~~~~~~~~--~  226 (284)
T 2a19_B          177 -KRTRSK--------------------------GTLRYMSPEQISSQDYGKEVDLYALGLILAELLH-VCDTAFETS--K  226 (284)
T ss_dssp             -CCCCCC--------------------------SCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHS-CCSSHHHHH--H
T ss_pred             -cccccC--------------------------CcccccChhhhccCCCcchhhhHHHHHHHHHHHh-cCCcchhHH--H
Confidence             000011                          3344555666666778999999999999999999 887774221  1


Q ss_pred             ecccccccccc-CC--------CCCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIIL-EK--------PKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~-~~--------p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+..+... ..        ..||..++..||++.+++..
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~  268 (284)
T 2a19_B          227 FFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRT  268 (284)
T ss_dssp             HHHHHHTTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhhcccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            11222111111 11        15788999999999998875

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.73  E-value=2.6e-19  Score=178.11  Aligned_cols=50  Identities=20%  Similarity=0.182  Sum_probs=44.1

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCccccccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSS   56 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~   56 (513)
                      .|+|.+++.+.    ++++..++.++.|++.||+|||++||+||||||+||+++
T Consensus       105 ~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~  154 (320)
T 2i6l_A          105 ETDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN  154 (320)
T ss_dssp             SEEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE
T ss_pred             CCCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc
Confidence            47999999753    368889999999999999999999999999999996654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.73  E-value=8.5e-19  Score=175.58  Aligned_cols=52  Identities=10%  Similarity=0.052  Sum_probs=45.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.+++.+      +++..++.++.|++.||+|||++||+||||||+|||++.+
T Consensus       115 ~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~  166 (330)
T 3nsz_A          115 VNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE  166 (330)
T ss_dssp             CCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT
T ss_pred             cCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCC
Confidence            467899988753      4788999999999999999999999999999999666544

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.73  E-value=2e-19  Score=179.13  Aligned_cols=59  Identities=19%  Similarity=0.310  Sum_probs=49.3

Q ss_pred             CCCCcHHHHHHhcCC-CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHEN-TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+... ...+++..++.++.|++.||+|||+++|+||||||+||+++.++
T Consensus       112 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~  171 (317)
T 2buj_A          112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG  171 (317)
T ss_dssp             CTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS
T ss_pred             CCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC
Confidence            467899999988421 22478999999999999999999999999999999996665543

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.73  E-value=7.3e-19  Score=176.88  Aligned_cols=55  Identities=27%  Similarity=0.409  Sum_probs=47.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHH--------hcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLE--------RHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH--------~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+.    ++++..+..++.|++.||+|||        +++|+||||||+||+++.++
T Consensus       122 ~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~  184 (342)
T 1b6c_B          122 HEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG  184 (342)
T ss_dssp             CTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTS
T ss_pred             cCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCC
Confidence            4678999999875    3688999999999999999999        89999999999996665543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.72  E-value=7.7e-19  Score=172.51  Aligned_cols=160  Identities=23%  Similarity=0.339  Sum_probs=113.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+..   .+++..+..++.|++.||+|||+++|+||||||+||+++.++.        ....++      
T Consensus       103 ~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~--------~~~~kL------  165 (287)
T 2wei_A          103 YTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEK--------DCDIKI------  165 (287)
T ss_dssp             CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSST--------TCCEEE------
T ss_pred             cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCC--------cccEEE------
Confidence            46899999998765   3689999999999999999999999999999999966654321        112344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||++.-..                                                 .         ..   
T Consensus       166 ------~Dfg~~~~~~-------------------------------------------------~---------~~---  178 (287)
T 2wei_A          166 ------IDFGLSTCFQ-------------------------------------------------Q---------NT---  178 (287)
T ss_dssp             ------CSTTGGGTBC-------------------------------------------------C---------CS---
T ss_pred             ------eccCcceeec-------------------------------------------------C---------CC---
Confidence                  7777765100                                                 0         00   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+                          +.+++||++.. .++.++|+||+|+++|+|++ |..||...+..+
T Consensus       179 -~~~~~~~~--------------------------~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~  229 (287)
T 2wei_A          179 -KMKDRIGT--------------------------AYYIAPEVLRG-TYDEKCDVWSAGVILYILLS-GTPPFYGKNEYD  229 (287)
T ss_dssp             -SCSCHHHH--------------------------HTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -ccccccCc--------------------------ccccChHHhcC-CCCCchhhHhHHHHHHHHHh-CCCCCCCCCHHH
Confidence             00000123                          33455555544 47899999999999999999 999998887777


Q ss_pred             eccccccccccCC-------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK-------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~-------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.....       +        .||..++..|+++.++|.+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          230 ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             HHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence            7766655432211       1        4788889999999998875

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.72  E-value=4.4e-19  Score=179.01  Aligned_cols=159  Identities=21%  Similarity=0.369  Sum_probs=111.6

Q ss_pred             CCCCcHHHH------HHhcCCCCCCchhHHHHHHHHHHHHHHHHHh-cceeccccCcccccccCccccccccCCccCCCc
Q psy17476          1 MRHGSLLNY------LRRHENTLGGNVGLLLDMCIQVCKGMAYLER-HNYIHRETKKSLYPSSLNEISFILWPDQMIRPK   73 (513)
Q Consensus         1 ~~~g~L~~~------l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~-~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~   73 (513)
                      +++|+|.++      +.+.... .+++..++.++.|++.||+|||+ +||+||||||+||+++.++           ..+
T Consensus       125 ~~~~~L~~~~~~~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~-----------~~k  192 (348)
T 2pml_X          125 MENDSILKFDEYFFVLDKNYTC-FIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNG-----------RVK  192 (348)
T ss_dssp             CTTCBSSEESSSEESSCSSSCC-CCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTS-----------CEE
T ss_pred             cCCCcHHHHHHHhhhhhhcccc-CCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCC-----------cEE
Confidence            467899998      5553222 57899999999999999999999 9999999999996665543           334


Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEe
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVM  153 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  153 (513)
                      +            .|||++.-                                                          .
T Consensus       193 l------------~dfg~~~~----------------------------------------------------------~  202 (348)
T 2pml_X          193 L------------SDFGESEY----------------------------------------------------------M  202 (348)
T ss_dssp             E------------CCCTTCEE----------------------------------------------------------C
T ss_pred             E------------eccccccc----------------------------------------------------------c
Confidence            4            77877650                                                          0


Q ss_pred             ecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccc-cccc-cCccccceeeeeeeeecCCC
Q psy17476        154 DDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYT-RFSS-KSDVWAYGVLMWEVFTCGKM  231 (513)
Q Consensus       154 ~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~-~~Dvws~G~~l~el~t~g~~  231 (513)
                      ...     ......|+..|+|||.                          +... .++. ++|+||+||++|||++ |..
T Consensus       203 ~~~-----~~~~~~~~~~y~aPE~--------------------------~~~~~~~~~~~~Di~slG~il~~l~~-g~~  250 (348)
T 2pml_X          203 VDK-----KIKGSRGTYEFMPPEF--------------------------FSNESSYNGAKVDIWSLGICLYVMFY-NVV  250 (348)
T ss_dssp             BTT-----EECSSCSCGGGCCGGG--------------------------GSSCCCEEHHHHHHHHHHHHHHHHHH-SSC
T ss_pred             ccc-----cccCCCCCcCccCchh--------------------------hcCCCCCCcchhhHHHHHHHHHHHHh-CCC
Confidence            000     0011235555555554                          4433 4555 8999999999999999 999


Q ss_pred             CCCCCCc-ceeccccccccccCC----------------------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        232 PYGRLKN-TEVVDRVQRGIILEK----------------------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       232 pf~~~~~-~~~~~~i~~~~~~~~----------------------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ||..... .++...+..+....+                      +        .||..++..|+++.++|.+
T Consensus       251 pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          251 PFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH  323 (348)
T ss_dssp             SSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             CCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            9987765 555555543322111                      1        4688888899999999876

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.72  E-value=6.2e-19  Score=176.29  Aligned_cols=153  Identities=17%  Similarity=0.253  Sum_probs=104.6

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++.+..   .+++..++.++.|++.||+|||+++|+||||||+|||++.          .....++        
T Consensus       133 ~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~----------~~~~~kL--------  191 (320)
T 3a99_A          133 VQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL----------NRGELKL--------  191 (320)
T ss_dssp             EEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET----------TTTEEEE--------
T ss_pred             CccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC----------CCCCEEE--------
Confidence            389999998864   4688999999999999999999999999999999966652          1223344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++-                                                          ....     .
T Consensus       192 ----~Dfg~~~~----------------------------------------------------------~~~~-----~  204 (320)
T 3a99_A          192 ----IDFGSGAL----------------------------------------------------------LKDT-----V  204 (320)
T ss_dssp             ----CCCTTCEE----------------------------------------------------------CCSS-----C
T ss_pred             ----eeCccccc----------------------------------------------------------cccc-----c
Confidence                78877650                                                          0000     0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccc-cccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRF-SSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      .....|+..|                          +|||++....+ +.++|||||||++|||++ |..||.....  +
T Consensus       205 ~~~~~gt~~y--------------------------~aPE~~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~~--~  255 (320)
T 3a99_A          205 YTDFDGTRVY--------------------------SPPEWIRYHRYHGRSAAVWSLGILLYDMVC-GDIPFEHDEE--I  255 (320)
T ss_dssp             BCCCCSCGGG--------------------------SCHHHHHHSCBCHHHHHHHHHHHHHHHHHH-SSCSCCSHHH--H
T ss_pred             ccCCCCCccC--------------------------CChHHhccCCCCCccchHHhHHHHHHHHHH-CCCCCCChhh--h
Confidence            0011244444                          45555554454 788999999999999999 9999965321  1


Q ss_pred             ccccccccccCCC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        242 VDRVQRGIILEKP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       242 ~~~i~~~~~~~~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..... ......+        .||..++..|+++++++.+
T Consensus       256 ~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          256 IRGQV-FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             HHCCC-CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hcccc-cccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            10000 0000111        5899999999999999986

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.72  E-value=5.9e-19  Score=179.27  Aligned_cols=55  Identities=11%  Similarity=0.074  Sum_probs=47.4

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++.....  .+++..++.++.|++.||+|||+++|+||||||+||+++.++
T Consensus       117 ~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~  171 (362)
T 3pg1_A          117 RTDLAQVIHDQRI--VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN  171 (362)
T ss_dssp             SEEHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCC
Confidence            4799999987543  368999999999999999999999999999999996665543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.72  E-value=7.8e-19  Score=174.37  Aligned_cols=162  Identities=15%  Similarity=0.219  Sum_probs=106.1

Q ss_pred             CCCCcHHHHHHhcC-CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHE-NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      +++|+|.+++.... ....+++..+..++.|++.||+|||+++|+||||||+||+++.++           ..++     
T Consensus       114 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~-----------~~kl-----  177 (310)
T 2wqm_A          114 ADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG-----------VVKL-----  177 (310)
T ss_dssp             CCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-----------CEEE-----
T ss_pred             CCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCC-----------CEEE-----
Confidence            46789999998732 122468899999999999999999999999999999996665544           2344     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||+++...                                                          .... 
T Consensus       178 -------~Dfg~~~~~~----------------------------------------------------------~~~~-  191 (310)
T 2wqm_A          178 -------GDLGLGRFFS----------------------------------------------------------SKTT-  191 (310)
T ss_dssp             -------CCC----------------------------------------------------------------------
T ss_pred             -------Eeccceeeec----------------------------------------------------------CCCc-
Confidence                   7777764100                                                          0000 


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc-
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-  238 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~-  238 (513)
                        ......|+                          +.+++||++....++.++|+||||+++|||++ |..||..... 
T Consensus       192 --~~~~~~~~--------------------------~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~  242 (310)
T 2wqm_A          192 --AAHSLVGT--------------------------PYYMSPERIHENGYNFKSDIWSLGCLLYEMAA-LQSPFYGDKMN  242 (310)
T ss_dssp             ---------C--------------------------CSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTC---CC
T ss_pred             --cccccCCC--------------------------eeEeChHHhCCCCCCchhhHHHHHHHHHHHHh-CCCCCcccchh
Confidence              00001133                          34455666666788999999999999999999 9999965432 


Q ss_pred             -ceeccccccccccCCC-------------CCcCCCCCCHHHHHHHHcC
Q psy17476        239 -TEVVDRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       239 -~~~~~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~  273 (513)
                       .++...+..+..++.+             .||..++..||++.+++..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          243 LYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             HHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence             2333444333322221             4788899999999988764

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.72  E-value=4.6e-19  Score=174.88  Aligned_cols=56  Identities=21%  Similarity=0.335  Sum_probs=48.1

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++...... .+++..++.++.|++.||+|||++||+||||||+||+++.++
T Consensus        85 ~~~L~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~  140 (299)
T 2r3i_A           85 HQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG  140 (299)
T ss_dssp             SEEHHHHHHHTTTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             cCCHHHHHHhhhcc-CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCC
Confidence            47999999886533 468889999999999999999999999999999996665543

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.72  E-value=2.7e-19  Score=179.64  Aligned_cols=55  Identities=22%  Similarity=0.256  Sum_probs=45.7

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      ++|+|.+++....   ++++..+..++.|++.||+|||++||+||||||+||+++.++
T Consensus       107 ~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~  161 (331)
T 4aaa_A          107 DHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG  161 (331)
T ss_dssp             SEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             CcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCC
Confidence            5667777665543   468999999999999999999999999999999996665554

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.71  E-value=1.1e-18  Score=176.52  Aligned_cols=53  Identities=19%  Similarity=0.102  Sum_probs=46.2

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +|+|.+++...    .+++..+..++.|++.||+|||++||+||||||+||+++.++
T Consensus        97 ~~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~  149 (353)
T 2b9h_A           97 QTDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC  149 (353)
T ss_dssp             SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             CccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCC
Confidence            47999999874    368899999999999999999999999999999996665543

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.71  E-value=2.3e-18  Score=186.66  Aligned_cols=59  Identities=24%  Similarity=0.349  Sum_probs=51.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+.....++++..++.++.|++.||+|||++||+||||||+||+++.++
T Consensus       100 ~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g  158 (676)
T 3qa8_A          100 CEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP  158 (676)
T ss_dssp             CSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCS
T ss_pred             CCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCC
Confidence            46899999999876544578899999999999999999999999999999997766543

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.70  E-value=1.9e-18  Score=175.18  Aligned_cols=55  Identities=16%  Similarity=0.120  Sum_probs=43.2

Q ss_pred             CCcHHHHHHh-cCCCCCCchhHHHHHHHHHHHHHHHHH--hcceeccccCcccccccC
Q psy17476          3 HGSLLNYLRR-HENTLGGNVGLLLDMCIQVCKGMAYLE--RHNYIHRETKKSLYPSSL   57 (513)
Q Consensus         3 ~g~L~~~l~~-~~~~~~~~~~~~~~~~~qi~~gl~ylH--~~~iiHrdikp~N~~~~~   57 (513)
                      .|+|.+.+.. ......+++..+..++.|++.||.|||  +++|+||||||+|||++.
T Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~  166 (360)
T 3e3p_A          109 PDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE  166 (360)
T ss_dssp             SCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEET
T ss_pred             cccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeC
Confidence            3566666554 222224688899999999999999999  999999999999966554

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.70  E-value=1.5e-18  Score=181.11  Aligned_cols=181  Identities=17%  Similarity=0.242  Sum_probs=104.5

Q ss_pred             CCcHHHHHHhcCCCCC----CchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcccccc--ccCCccCCCceEE
Q psy17476          3 HGSLLNYLRRHENTLG----GNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFI--LWPDQMIRPKVVV   76 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~----~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~--~l~~~~~~~~~~~   76 (513)
                      +|+|.+++........    .++..+..++.||+.||+|||+++||||||||+|||++.++....  ...+.....++  
T Consensus        92 ~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL--  169 (434)
T 2rio_A           92 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI--  169 (434)
T ss_dssp             SEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE--
T ss_pred             CCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEE--
Confidence            5899999988643210    133356789999999999999999999999999977765431000  00012223344  


Q ss_pred             EeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecC
Q psy17476         77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT  156 (513)
Q Consensus        77 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  156 (513)
                                +|||+++-.                                                          ...
T Consensus       170 ----------~DFG~a~~~----------------------------------------------------------~~~  181 (434)
T 2rio_A          170 ----------SDFGLCKKL----------------------------------------------------------DSG  181 (434)
T ss_dssp             ----------CCCTTCEEC----------------------------------------------------------CC-
T ss_pred             ----------cccccceec----------------------------------------------------------CCC
Confidence                      788877510                                                          000


Q ss_pred             Cccc-eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCC
Q psy17476        157 QEHW-WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGR  235 (513)
Q Consensus       157 ~~~~-~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~  235 (513)
                      .... .......|+.+|+|||.+.....                   ......++.++||||+||++|||++.|..||..
T Consensus       182 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-------------------~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~  242 (434)
T 2rio_A          182 QSSFRTNLNNPSGTSGWRAPELLEESNN-------------------LQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD  242 (434)
T ss_dssp             -------------CCTTSCHHHHSCCCT-------------------TSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred             CccceeeecCCCCCCCccCHHHhccccc-------------------cccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence            0000 00011235556666655432110                   001246799999999999999999878999975


Q ss_pred             CCcceeccccccccccC-----------------CCCCcCCCCCCHHHHHHHHcC
Q psy17476        236 LKNTEVVDRVQRGIILE-----------------KPKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       236 ~~~~~~~~~i~~~~~~~-----------------~p~~w~~~~~~R~~aeeLL~~  273 (513)
                      ....+ ...+......+                 ...||..++..||++.+++.+
T Consensus       243 ~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  296 (434)
T 2rio_A          243 KYSRE-SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH  296 (434)
T ss_dssp             TTTHH-HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             chhhH-HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence            54322 11111111110                 014788889999999999876

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.70  E-value=1.4e-18  Score=177.51  Aligned_cols=123  Identities=18%  Similarity=0.280  Sum_probs=87.9

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .|+|.+++..     .+++..+..++.|++.||+|||++||+||||||+|||++.++           ..++        
T Consensus       130 ~~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~-----------~~kL--------  185 (371)
T 4exu_A          130 QTDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC-----------ELKI--------  185 (371)
T ss_dssp             CEEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-----------CEEE--------
T ss_pred             cccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCC-----------CEEE--------
Confidence            4678777643     368899999999999999999999999999999996665554           3344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++...                                                          .      .
T Consensus       186 ----~Dfg~a~~~~----------------------------------------------------------~------~  197 (371)
T 4exu_A          186 ----LDFGLARHAD----------------------------------------------------------A------E  197 (371)
T ss_dssp             ----CSTTCC----------------------------------------------------------------------
T ss_pred             ----EecCcccccc----------------------------------------------------------c------C
Confidence                7888765100                                                          0      0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc-ccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY-TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      .....|+..|+|                          ||++.. ..++.++||||+||++|||++ |..||...+..+.
T Consensus       198 ~~~~~~t~~y~a--------------------------PE~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~  250 (371)
T 4exu_A          198 MTGYVVTRWYRA--------------------------PEVILSWMHYNQTVDIWSVGCIMAEMLT-GKTLFKGKDYLDQ  250 (371)
T ss_dssp             --CTTCCCTTSC--------------------------HHHHSCCSCCCTTHHHHHHHHHHHHHHH-SSCSCCCSSHHHH
T ss_pred             cCCcccCccccC--------------------------HHHhcCCCCCCcHHhHHHHHHHHHHHHh-CCCCCCCCChHHH
Confidence            011224444555                          444444 578999999999999999999 9999987765444


Q ss_pred             ccc
Q psy17476        242 VDR  244 (513)
Q Consensus       242 ~~~  244 (513)
                      +..
T Consensus       251 ~~~  253 (371)
T 4exu_A          251 LTQ  253 (371)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            433

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.70  E-value=1.8e-18  Score=171.95  Aligned_cols=154  Identities=18%  Similarity=0.255  Sum_probs=105.1

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCccccccc-CccccccccCCccCCCceEEEecc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSS-LNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~-~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ++|+|.+++.++.   .+++..++.++.|++.||+|||+++|+||||||+||+++ .++           ..++      
T Consensus       122 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~-----------~~kl------  181 (312)
T 2iwi_A          122 PAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG-----------CAKL------  181 (312)
T ss_dssp             SEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTT-----------EEEE------
T ss_pred             CCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCC-----------eEEE------
Confidence            5799999999865   468999999999999999999999999999999996665 232           2344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-                                                          ....    
T Consensus       182 ------~dfg~~~~----------------------------------------------------------~~~~----  193 (312)
T 2iwi_A          182 ------IDFGSGAL----------------------------------------------------------LHDE----  193 (312)
T ss_dssp             ------CCCSSCEE----------------------------------------------------------CCSS----
T ss_pred             ------EEcchhhh----------------------------------------------------------cccC----
Confidence                  77777640                                                          0000    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccc-cccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRF-SSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                       ......|+..|+||                          |++....+ +.++|+||+||++|||++ |..||..... 
T Consensus       194 -~~~~~~~~~~y~aP--------------------------E~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~-  244 (312)
T 2iwi_A          194 -PYTDFDGTRVYSPP--------------------------EWISRHQYHALPATVWSLGILLYDMVC-GDIPFERDQE-  244 (312)
T ss_dssp             -CBCCCCSCTTTSCH--------------------------HHHHHSCBCHHHHHHHHHHHHHHHHHH-SSCSCCSHHH-
T ss_pred             -cccccCCcccccCc--------------------------eeeecCCCCCccchHHHHHHHHHHHHH-CCCCCCChHH-
Confidence             00111244445554                          44444444 458999999999999999 9999965321 


Q ss_pred             eeccccccc-------cccCCCCCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVVDRVQRG-------IILEKPKAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~-------~~~~~p~~w~~~~~~R~~aeeLL~~  273 (513)
                       +.......       .......||..++..|+++.+++.+
T Consensus       245 -~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          245 -ILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             -HHHTCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             -HhhhccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             11100000       0000115899999999999999986

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.69  E-value=3.3e-18  Score=170.15  Aligned_cols=161  Identities=19%  Similarity=0.300  Sum_probs=103.3

Q ss_pred             CcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhc-ceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          4 GSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERH-NYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         4 g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~-~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +.+..++.+...  .+++..+..++.|++.||+|||++ ||+||||||+||+++.++           ..++        
T Consensus       108 ~~~~~l~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~-----------~~kl--------  166 (318)
T 2dyl_A          108 TCAEKLKKRMQG--PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG-----------QIKL--------  166 (318)
T ss_dssp             EEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTS-----------CEEE--------
T ss_pred             CcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCC-----------CEEE--------
Confidence            445555444333  468899999999999999999995 999999999996665543           3344        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .||++++...                                                 ...             .
T Consensus       167 ----~dfg~~~~~~-------------------------------------------------~~~-------------~  180 (318)
T 2dyl_A          167 ----CDFGISGRLV-------------------------------------------------DDK-------------A  180 (318)
T ss_dssp             ----CCCTTC----------------------------------------------------------------------
T ss_pred             ----EECCCchhcc-------------------------------------------------CCc-------------c
Confidence                7787765100                                                 000             0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCC-Cccee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRL-KNTEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~-~~~~~  241 (513)
                      .....|+..|+|||.+....                     .....++.++|||||||++|||++ |..||... ...+.
T Consensus       181 ~~~~~~~~~y~aPE~~~~~~---------------------~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~  238 (318)
T 2dyl_A          181 KDRSAGCAAYMAPERIDPPD---------------------PTKPDYDIRADVWSLGISLVELAT-GQFPYKNCKTDFEV  238 (318)
T ss_dssp             ------CCTTCCHHHHC-----------------------------CCTHHHHHHHHHHHHHHHH-SSCTTTTCCSHHHH
T ss_pred             ccccCCCccccChhhccccc---------------------ccccCCccccchhhHHHHHHHHHh-CCCCCCCCCccHHH
Confidence            01112555666666543211                     023467889999999999999999 99999764 33444


Q ss_pred             ccccccccccCCC--------------CCcCCCCCCHHHHHHHHcC
Q psy17476        242 VDRVQRGIILEKP--------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       242 ~~~i~~~~~~~~p--------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ...+..+..+..+              .||..++..||++.+++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          239 LTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             HHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             HHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            4444333332221              5789999999999999876

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.69  E-value=3.5e-18  Score=171.08  Aligned_cols=163  Identities=17%  Similarity=0.264  Sum_probs=97.7

Q ss_pred             CCcHHHHHHhcC--CCCCCchhHHHHHHHHHHHHHHHHHhc-ceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          3 HGSLLNYLRRHE--NTLGGNVGLLLDMCIQVCKGMAYLERH-NYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         3 ~g~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~gl~ylH~~-~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      .|+|.+++....  ....+++..+..++.|++.||.|||++ +|+||||||+||+++.++           ..++     
T Consensus       104 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~-----------~~kl-----  167 (327)
T 3aln_A          104 STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSG-----------NIKL-----  167 (327)
T ss_dssp             SEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTT-----------EEEE-----
T ss_pred             CCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCC-----------CEEE-----
Confidence            468888877521  112468999999999999999999999 999999999997665554           2344     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             .|||+++-..-                                                         ..   
T Consensus       168 -------~Dfg~~~~~~~---------------------------------------------------------~~---  180 (327)
T 3aln_A          168 -------CDFGISGQLVD---------------------------------------------------------SI---  180 (327)
T ss_dssp             -------CCCSSSCC-----------------------------------------------------------------
T ss_pred             -------ccCCCceeccc---------------------------------------------------------cc---
Confidence                   78887651000                                                         00   


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc-
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN-  238 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~-  238 (513)
                        ......|+..|+|||.+....                      ....++.++|||||||++|||++ |..||..... 
T Consensus       181 --~~~~~~gt~~y~aPE~~~~~~----------------------~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~  235 (327)
T 3aln_A          181 --AKTRDAGCRPYMAPERIDPSA----------------------SRQGYDVRSDVWSLGITLYELAT-GRFPYPKWNSV  235 (327)
T ss_dssp             -------------------------------------------------CCSHHHHHHHHHHHHHHHH-SCCCSSCC---
T ss_pred             --ccccCCCCccccCceeecccc----------------------CcCCCCchhhHHHHHHHHHHHHH-CCCCCCCcchH
Confidence              001112566677776653210                      23457899999999999999999 9999986542 


Q ss_pred             ceeccccccccccCCC----------------CCcCCCCCCHHHHHHHHcC
Q psy17476        239 TEVVDRVQRGIILEKP----------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       239 ~~~~~~i~~~~~~~~p----------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+.+..+..+..+..+                .||..++..||++.+++.+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          236 FDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH  286 (327)
T ss_dssp             ----CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence            2333333333222111                4788999999999999875

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.69  E-value=2.5e-18  Score=169.41  Aligned_cols=57  Identities=14%  Similarity=0.230  Sum_probs=48.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++.+...  .+++..+..++.|++.||+|||+++|+||||||+||+++.++
T Consensus        97 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~  153 (303)
T 1zy4_A           97 CENGTLYDLIHSENL--NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESR  153 (303)
T ss_dssp             CCSCBHHHHHHHSCG--GGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             CCCCCHHHhhhcccc--ccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCC
Confidence            468999999997543  357889999999999999999999999999999996665544

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.68  E-value=2.4e-18  Score=174.26  Aligned_cols=52  Identities=15%  Similarity=0.188  Sum_probs=43.3

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .|+|.+++..     .+++..+..++.||+.||+|||++||+||||||+||+++.++
T Consensus       112 ~~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~  163 (353)
T 3coi_A          112 QTDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC  163 (353)
T ss_dssp             SEEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTC
T ss_pred             cCCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCC
Confidence            3677776643     368899999999999999999999999999999996665543

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.65  E-value=2.2e-17  Score=162.50  Aligned_cols=54  Identities=13%  Similarity=0.015  Sum_probs=44.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.+++++.     .....+..++.|++.||+|||++||+||||||+|||++.++
T Consensus       113 ~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g  166 (286)
T 3uqc_A          113 IRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDG  166 (286)
T ss_dssp             CCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTS
T ss_pred             cCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCC
Confidence            4689999999653     13446888999999999999999999999999996665543

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.63  E-value=6.1e-16  Score=153.19  Aligned_cols=86  Identities=33%  Similarity=0.585  Sum_probs=73.1

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCCH---HHHHHHHHHHhcCCCCceeceeeEEEeCCee
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSE---DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~---~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      ...|+++.+++++.+.||+|+||+||+|+++++++++++|....+.   +.|.+|+++|++++|||||+++|+|.+ +.+
T Consensus        28 ~~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~  106 (307)
T 3omv_A           28 SYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNL  106 (307)
T ss_dssp             -CCCBCCTTSCCEEEECCCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSC
T ss_pred             CcCcEEcHHHeEEeeEEeeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeE
Confidence            4579999999999999999999999999988765555555444333   469999999999999999999999865 568


Q ss_pred             EEEEccCCCC
Q psy17476        498 YIVTDTSSFR  507 (513)
Q Consensus       498 ~lV~E~~~~G  507 (513)
                      |||||||+||
T Consensus       107 ~iVmEy~~gG  116 (307)
T 3omv_A          107 AIVTQWCEGS  116 (307)
T ss_dssp             EEEEECCSSC
T ss_pred             EEEEEcCCCC
Confidence            9999999987

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.61  E-value=1.2e-14  Score=140.15  Aligned_cols=145  Identities=23%  Similarity=0.429  Sum_probs=120.1

Q ss_pred             CCcCCCCCCHHHHHHHHcCC-CCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChh---
Q psy17476        255 KAWYVGDMSRQRAESILKQE-DKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP---  329 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~-~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~---  329 (513)
                      .+|+++.++|..|+++|... ..+|+||||+|++ ++.|+||++.   ...++||+|....+|.|++.....+.++.   
T Consensus         5 ~~Wy~g~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~---~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLv   81 (254)
T 1a81_A            5 LPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAH---GRKAHHYTIERELNGTYAIAGGRTHASPADLC   81 (254)
T ss_dssp             STTBCSSCCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEE---TTEEEEEEEEECTTSCEEETTSCCBSSHHHHH
T ss_pred             CccccCCCCHHHHHHHHhcCCCCCcEEEEEecCCCCCCEEEEEEE---CCeeEEEEEEEcCCCCEEeCCCCCcCCHHHHH
Confidence            46999999999999999644 4899999999986 7999999987   67899999999888888886444442221   


Q ss_pred             --------------------------------------------------------------------------------
Q psy17476        330 --------------------------------------------------------------------------------  329 (513)
Q Consensus       330 --------------------------------------------------------------------------------  329 (513)
                                                                                                      
T Consensus        82 ~~y~~~~~~l~~~L~~p~~~~~~~~~~~~~~~~i~~~~l~~~v~~~w~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~Wy  161 (254)
T 1a81_A           82 HYHSQESDGLVCLLKKPFNRPQGVQPKTGPFEDLKENLIREYVKQTWNLQGQALEQAIISQKPQLEKLIATTAHEKMPWF  161 (254)
T ss_dssp             HHHTTCCTTSSSCCCEECCCCSSCCCCCCSSHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTSGGGSTTE
T ss_pred             HHHHhCCCCceECCccccCCCCCCCCccchhcchHHHHHHHHHHHHHHhccchhhhhcccCCchhhhcccccccccCCcc
Confidence                                                                                            


Q ss_pred             ----------hhhc----cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccc
Q psy17476        330 ----------EVKD----KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRH  395 (513)
Q Consensus       330 ----------~~l~----~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~  395 (513)
                                ++|.    .+|.||||.|+..|.|+|++..   .+.++|+.|....+|.|++.+...|.++.+||+||..
T Consensus       162 hg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~g~~~LSv~~---~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~  238 (254)
T 1a81_A          162 HGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLH---EGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSY  238 (254)
T ss_dssp             EEECCHHHHHHHHHSSCCCTTCEEEEECSSSSCEEEEEEE---TTEEEEEEEEECTTSCEECTTSCCBSCHHHHHHHHTT
T ss_pred             ccCCCHHHHHHHHHhcCCCCceEEEEecCCCCCEEEEEEE---CCEEEEEEEEEcCCCCEEecCCcccCCHHHHHHHHHH
Confidence                      2222    5799999999656899999987   5789999999888888998878999999999999999


Q ss_pred             cCCCCccccC
Q psy17476        396 NSGGLASRLK  405 (513)
Q Consensus       396 ~~~~~~~~~~  405 (513)
                      ...++...+.
T Consensus       239 ~~~~l~~~L~  248 (254)
T 1a81_A          239 KADGLLRVLT  248 (254)
T ss_dssp             CCTTSSSCCC
T ss_pred             CCCCCCeecC
Confidence            9888776663

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.60  E-value=8.6e-15  Score=139.92  Aligned_cols=143  Identities=26%  Similarity=0.526  Sum_probs=115.8

Q ss_pred             CCcCCCCC-----CHHHHHHHHcC-----CCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeecccc---ceecC
Q psy17476        255 KAWYVGDM-----SRQRAESILKQ-----EDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRG---EFFLS  320 (513)
Q Consensus       255 ~~w~~~~~-----~R~~aeeLL~~-----~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g---~~~~~  320 (513)
                      ++|+++.+     +|..|+++|..     ..++|+||||+|++ +|.|+||++.   ...++||+|....++   .|++.
T Consensus         4 e~WfhG~i~~~~~sR~~AE~lL~~~~~~~~~~dG~FLVR~S~s~~G~y~LSv~~---~~~v~H~~I~~~~~~g~~~~~~~   80 (246)
T 4fbn_A            4 EKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWR---NGKVQHCRIHSRQDAGTPKFFLT   80 (246)
T ss_dssp             CTTBCCCCSCC-CHHHHHHHHHHHHHHHHTCCTTCEEEEECSSSTTCEEEEEEE---TTEEEEEEEEEECGGGCCEEEEE
T ss_pred             CCCcCCccccccCCHHHHHHHHHHhhhccCCCCCEEEEEcCCCCCCCEEEEEEE---CCEEEEEEEEEECCCCceeEEec
Confidence            46999999     79999999863     46899999999976 8999999987   788999999766654   47777


Q ss_pred             CCccccChhhhh-----------------------------------------------c--cCCcEEEEecCCCCcEEE
Q psy17476        321 EKHCCHSIPEVK-----------------------------------------------D--KEGCFVVRNSSTKGLYTL  351 (513)
Q Consensus       321 ~~~~~~~~~~~l-----------------------------------------------~--~~g~~LvR~s~~~~~~~l  351 (513)
                      ....+.++.+++                                               .  +.|+||||.|++.+.|+|
T Consensus        81 ~~~~F~sl~~LV~~y~~~~l~~~~~~~~l~~p~p~~~~~~~~~Wyhg~isr~~Ae~lL~~~~~~G~FLVR~s~~~g~y~L  160 (246)
T 4fbn_A           81 DNLVFDSLYDLITHYQQVPLRCNEFEMRLSEPVPQTNAHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAI  160 (246)
T ss_dssp             TTEEESSHHHHHHHHHHSCEECSSCEECCCCBCCCSCGGGGSTTEESSCCHHHHHHHHHTSCCTTEEEEEECSSTTEEEE
T ss_pred             CCcccCCHHHHHHhHhhcccccccccccccccccccCCcccCCeeecCccHHHHHHHHhhCCCCCeEEEEecCCCCCEEE
Confidence            777676655554                                               1  369999999987789999


Q ss_pred             EEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccC
Q psy17476        352 SLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       352 sv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                      ++..   .+.++|++|...  +.+++.+...|.++.+||++|+.++..+...+.
T Consensus       161 sv~~---~~~v~H~~I~~~--~~~~~~~~~~F~sL~~Lv~~y~~~p~~~~~~L~  209 (246)
T 4fbn_A          161 SFRA---EGKIKHCRVQQE--GQTVMLGNSEFDSLVDLISYYEKHPLYRKMKLR  209 (246)
T ss_dssp             EEEE---TTEEEEEEEEEE--TTEEEETTEEESCHHHHHHHHHHSCSBTTBCCC
T ss_pred             EEEe---CCCeEEEEEEeC--CCEEEeCCCccCCHHHHHHHhCcCCCCCCcCCC
Confidence            9986   478999999864  445666778899999999999998776665553

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.60  E-value=1.8e-15  Score=149.52  Aligned_cols=85  Identities=31%  Similarity=0.492  Sum_probs=68.4

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeC-----ceeeEEeec-CCCC---HHHHHHHHHHHhcCCCCceeceeeEEEeC
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVAMMKE-GTMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKH  494 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-----~~~v~~~k~-~~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~  494 (513)
                      ++|++++|.+.+.||+|+||+||+|++..     ++..+|+|. ...+   .++|.+|+++|++++|||||+++|+|.++
T Consensus         8 ~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~   87 (299)
T 4asz_A            8 QHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG   87 (299)
T ss_dssp             CBCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             cccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC
Confidence            46788999999999999999999999853     233444443 2222   35699999999999999999999999999


Q ss_pred             CeeEEEEccCCCCc
Q psy17476        495 RPIYIVTDTSSFRL  508 (513)
Q Consensus       495 ~~~~lV~E~~~~Gl  508 (513)
                      +++|||||||+||-
T Consensus        88 ~~~~lV~Ey~~~G~  101 (299)
T 4asz_A           88 DPLIMVFEYMKHGD  101 (299)
T ss_dssp             SSEEEEEECCTTCB
T ss_pred             CEEEEEEEcCCCCc
Confidence            99999999999873

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.60  E-value=1.7e-14  Score=139.02  Aligned_cols=145  Identities=27%  Similarity=0.436  Sum_probs=120.0

Q ss_pred             CCcCCCCCCHHHHHHHHcC-CCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChh---
Q psy17476        255 KAWYVGDMSRQRAESILKQ-EDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP---  329 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~-~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~---  329 (513)
                      .+|+++.++|..|+++|.. ...+|+||||.|++ .+.|+||++.   ...++||+|....+|.|++.....+.|+.   
T Consensus         6 ~~Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~---~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV   82 (254)
T 2oq1_A            6 LPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVH---DVRFHHFPIERQLNGTYAIAGGKAHCGPAELC   82 (254)
T ss_dssp             CTTBCBSCCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEE---TTEEEEEEEEECTTSCEEETTSCCBSSHHHHH
T ss_pred             CCccCCCCCHHHHHHHHhccCCCCcEEEEEeCCCCCCCEEEEEEE---CCeEEEEEEEEeCCCCEEeCCCCccCCHHHHH
Confidence            5699999999999999964 35899999999976 6899999987   67899999999888888886544442221   


Q ss_pred             --------------------------------------------------------------------------------
Q psy17476        330 --------------------------------------------------------------------------------  329 (513)
Q Consensus       330 --------------------------------------------------------------------------------  329 (513)
                                                                                                      
T Consensus        83 ~~y~~~~~~l~~~L~~p~~~~~~~~~~~~~f~~i~~~~l~~~v~~~w~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~Wy  162 (254)
T 2oq1_A           83 EFYSRDPDGLPCNLRKPCNRPSGLEPQPGVFDCLRDAMVRDYVRQTWKLEGEALEQAIISQAPQVEKLIATTAHERMPWY  162 (254)
T ss_dssp             HHHHHCCTTSSSCCCSBCCCCTTCCCBCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGGSTTB
T ss_pred             HHHHhCCCCcccccccccCCCCCCCCCcccccchhHHHHHHHHHHHHhhcchhhhhhhccCCccccccccccccCCCccc
Confidence                                                                                            


Q ss_pred             ----------hhhc----cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccc
Q psy17476        330 ----------EVKD----KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRH  395 (513)
Q Consensus       330 ----------~~l~----~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~  395 (513)
                                .+|.    ..|.||||.|+..|.|+|++..   .+.++|++|....+|.|++.+...|.++.+||+||..
T Consensus       163 hg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~g~~~LSv~~---~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~  239 (254)
T 2oq1_A          163 HSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIY---GKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKL  239 (254)
T ss_dssp             CSSCCHHHHHHHHHSSCCCTTEEEEEECSSTTEEEEEEEE---TTEEEEEEEEECTTSCEESTTSCCBSSHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHHHhcCCCCceEEEEecCCCCCEEEEEEE---CCeEEEEEEEEcCCCCEEECCCceECCHHHHHHHHHh
Confidence                      1222    5799999999666889999987   5789999999888888998878999999999999999


Q ss_pred             cCCCCccccC
Q psy17476        396 NSGGLASRLK  405 (513)
Q Consensus       396 ~~~~~~~~~~  405 (513)
                      ...++...+.
T Consensus       240 ~~~~l~~~L~  249 (254)
T 2oq1_A          240 KADGLIYCLK  249 (254)
T ss_dssp             CCTTSSSCCC
T ss_pred             CCCCCCeeCC
Confidence            9888776664

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.59  E-value=2.2e-15  Score=149.49  Aligned_cols=84  Identities=32%  Similarity=0.489  Sum_probs=69.1

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeC-----ceeeEEeecCC-----CCHHHHHHHHHHHhcCCCCceeceeeEEEe
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVAMMKEGT-----MSEDDFIEEAKVMTRLQHQNLVQLYGVCSK  493 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-----~~~v~~~k~~~-----~~~~~f~~E~~il~~l~HpNIV~l~g~~~~  493 (513)
                      ++++.+++++.+.||+|+||+||+|.+.+     ....+|+|...     ...++|.+|+.+|++++|||||+++|+|.+
T Consensus        21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~  100 (308)
T 4gt4_A           21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK  100 (308)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE
Confidence            46788899999999999999999999853     22344444221     124689999999999999999999999999


Q ss_pred             CCeeEEEEccCCCC
Q psy17476        494 HRPIYIVTDTSSFR  507 (513)
Q Consensus       494 ~~~~~lV~E~~~~G  507 (513)
                      ++++|||||||++|
T Consensus       101 ~~~~~lV~Ey~~~G  114 (308)
T 4gt4_A          101 DQPLSMIFSYCSHG  114 (308)
T ss_dssp             SSSCEEEEECCSSC
T ss_pred             CCEEEEEEEcCCCC
Confidence            99999999999987

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.59  E-value=2.1e-15  Score=151.02  Aligned_cols=86  Identities=31%  Similarity=0.508  Sum_probs=71.0

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeC-----ceeeEEeec-CCCC---HHHHHHHHHHHhcCCCCceeceeeEEEe
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVAMMKE-GTMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSK  493 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-----~~~v~~~k~-~~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~  493 (513)
                      .+++..+++.+.++||+|+||+||+|++++     ++..+|+|. ...+   .++|.+|+++|++++|||||+++|+|.+
T Consensus        35 ~~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~  114 (329)
T 4aoj_A           35 VHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE  114 (329)
T ss_dssp             SCBCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             hcccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence            356788899999999999999999999863     234444443 2222   3579999999999999999999999999


Q ss_pred             CCeeEEEEccCCCCc
Q psy17476        494 HRPIYIVTDTSSFRL  508 (513)
Q Consensus       494 ~~~~~lV~E~~~~Gl  508 (513)
                      .+++|||||||++|-
T Consensus       115 ~~~~~lV~Ey~~~G~  129 (329)
T 4aoj_A          115 GRPLLMVFEYMRHGD  129 (329)
T ss_dssp             SSSEEEEEECCTTCB
T ss_pred             CCEEEEEEEcCCCCc
Confidence            999999999999873

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.57  E-value=7.5e-17  Score=177.71  Aligned_cols=52  Identities=12%  Similarity=0.062  Sum_probs=42.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccC
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSL   57 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~   57 (513)
                      |++|+|.+++.+     .+++..++.++.||+.||.|||++|||||||||+|||++.
T Consensus       166 ~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~  217 (681)
T 2pzi_A          166 VGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE  217 (681)
T ss_dssp             CCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS
T ss_pred             CCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeC
Confidence            568999988765     3689999999999999999999999999999999965544

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.57  E-value=1.9e-16  Score=170.41  Aligned_cols=64  Identities=13%  Similarity=0.105  Sum_probs=52.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ++||+|.++|.+.+   ++++   ..|++||+.||+|||++|||||||||+|||++.++           .+||      
T Consensus       324 v~G~~L~d~i~~~~---~l~~---~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg-----------~vKL------  380 (569)
T 4azs_A          324 LPGRLLSDMLAAGE---EIDR---EKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQ-----------HARL------  380 (569)
T ss_dssp             CCSEEHHHHHHTTC---CCCH---HHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHhCC---CCCH---HHHHHHHHHHHHHHHHCCceeccCchHhEEECCCC-----------CEEE------
Confidence            58999999999865   3453   35899999999999999999999999996555544           4466      


Q ss_pred             ccccCCCCccccc
Q psy17476         81 FKAIEGGDLSLEK   93 (513)
Q Consensus        81 ~~~~~~~~~~l~~   93 (513)
                            .|||+++
T Consensus       381 ------~DFGlAr  387 (569)
T 4azs_A          381 ------IDFGSIV  387 (569)
T ss_dssp             ------CCCTTEE
T ss_pred             ------eecccCe
Confidence                  8999886

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.54  E-value=4.4e-16  Score=156.47  Aligned_cols=54  Identities=15%  Similarity=0.077  Sum_probs=45.8

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHH-hcceeccccCcccccccCcc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLE-RHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH-~~~iiHrdikp~N~~~~~~~   59 (513)
                      ++|+|.+.+.+.    .+++..++.+++||+.||+||| +++||||||||+|||++.++
T Consensus       145 ~~g~ll~~~~~~----~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~  199 (336)
T 2vuw_A          145 FGGIDLEQMRTK----LSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTS  199 (336)
T ss_dssp             CCCEETGGGTTT----CCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECS
T ss_pred             CCCccHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccC
Confidence            578777776542    3689999999999999999999 99999999999997777654

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.52  E-value=1.4e-14  Score=145.63  Aligned_cols=79  Identities=25%  Similarity=0.332  Sum_probs=63.0

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC---CC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT---MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~---~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      ++|++.+.||+|+||+||+|+++.++..+|+|...   ..   .+.|.+|+++|++|+|||||++++++.+++.+|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            68999999999999999999998777766666432   22   2468999999999999999999999999999999999


Q ss_pred             cCCCC
Q psy17476        503 TSSFR  507 (513)
Q Consensus       503 ~~~~G  507 (513)
                      ||+||
T Consensus       104 y~~gg  108 (350)
T 4b9d_A          104 YCEGG  108 (350)
T ss_dssp             CCTTC
T ss_pred             CCCCC
Confidence            99985

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.52  E-value=1.5e-14  Score=145.23  Aligned_cols=81  Identities=20%  Similarity=0.261  Sum_probs=70.6

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecC----CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG----TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~----~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      .+.|++.+.||+|+||+||+|+++.++..+|+|..    ....+.+.+|+++|++++|||||++++++.+++.+||||||
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  152 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  152 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            46799999999999999999999887777766632    22345689999999999999999999999999999999999


Q ss_pred             CCCCc
Q psy17476        504 SSFRL  508 (513)
Q Consensus       504 ~~~Gl  508 (513)
                      |+||.
T Consensus       153 ~~gg~  157 (346)
T 4fih_A          153 LEGGA  157 (346)
T ss_dssp             CTTEE
T ss_pred             CCCCc
Confidence            99974

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.52  E-value=1.9e-14  Score=142.42  Aligned_cols=81  Identities=21%  Similarity=0.228  Sum_probs=71.3

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      ..++|++.+.||+|+||+||+|+.+.++..+|+|...       ...+.+.+|+++|++++|||||++++++.+++.+||
T Consensus        30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi  109 (311)
T 4aw0_A           30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF  109 (311)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            3468999999999999999999998887777777432       234578999999999999999999999999999999


Q ss_pred             EEccCCCC
Q psy17476        500 VTDTSSFR  507 (513)
Q Consensus       500 V~E~~~~G  507 (513)
                      |||||+||
T Consensus       110 vmEy~~gG  117 (311)
T 4aw0_A          110 GLSYAKNG  117 (311)
T ss_dssp             EECCCTTE
T ss_pred             EEecCCCC
Confidence            99999986

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.51  E-value=1.4e-14  Score=146.28  Aligned_cols=88  Identities=27%  Similarity=0.475  Sum_probs=71.2

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCc-----eeeEEeecCCC--C---HHHHHHHHHHHhcCCC-Cceeceee
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-----IDVAMMKEGTM--S---EDDFIEEAKVMTRLQH-QNLVQLYG  489 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~-----~~v~~~k~~~~--~---~~~f~~E~~il~~l~H-pNIV~l~g  489 (513)
                      .+.|+++.++|++.+.||+|+||+||+|.+.+.     .+.+++|....  .   .+.|.+|+++|++++| ||||+++|
T Consensus        56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g  135 (353)
T 4ase_A           56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG  135 (353)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence            357999999999999999999999999998753     23444443221  1   2469999999999965 89999999


Q ss_pred             EEEeC-CeeEEEEccCCCCc
Q psy17476        490 VCSKH-RPIYIVTDTSSFRL  508 (513)
Q Consensus       490 ~~~~~-~~~~lV~E~~~~Gl  508 (513)
                      +|.+. +++|||||||++|-
T Consensus       136 ~~~~~~~~~~iV~Ey~~~G~  155 (353)
T 4ase_A          136 ACTKPGGPLMVIVEFCKFGN  155 (353)
T ss_dssp             EECCTTSCCEEEEECCTTEE
T ss_pred             EEEecCCEEEEEEEcCCCCC
Confidence            99764 67999999999873

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.50  E-value=3.2e-14  Score=146.40  Aligned_cols=82  Identities=20%  Similarity=0.255  Sum_probs=71.2

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCC----CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT----MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~----~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      +.+.|++.+.||+|+||.||+|+++.++..+|+|...    ...+.+.+|+.+|++++|||||++++++.+++.+|||||
T Consensus       149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE  228 (423)
T 4fie_A          149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME  228 (423)
T ss_dssp             GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence            3567999999999999999999998877777666322    234568999999999999999999999999999999999


Q ss_pred             cCCCCc
Q psy17476        503 TSSFRL  508 (513)
Q Consensus       503 ~~~~Gl  508 (513)
                      ||+||.
T Consensus       229 y~~gG~  234 (423)
T 4fie_A          229 FLEGGA  234 (423)
T ss_dssp             CCTTEE
T ss_pred             CCCCCc
Confidence            999974

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=99.46  E-value=1.1e-14  Score=152.48  Aligned_cols=146  Identities=19%  Similarity=0.299  Sum_probs=76.7

Q ss_pred             cCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhccC
Q psy17476        257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKE  335 (513)
Q Consensus       257 w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~~  335 (513)
                      |+++.++|.+|+++|..  ++|+||||+|++ +|.|++|++.                                      
T Consensus        53 w~hg~i~r~~ae~lL~~--~~G~FLvR~S~~~~g~~~Lsv~~--------------------------------------   92 (463)
T 3cxl_A           53 EFHGMISREAADQLLIV--AEGSYLIRESQRQPGTYTLALRF--------------------------------------   92 (463)
T ss_dssp             TBCCSCCHHHHHHHHTT--STTEEEEEECSSSTTCEEEEEEC--------------------------------------
T ss_pred             ccccCCCHHHHHHHHcC--CCCeEEEeccCCCCCCEEEEEEE--------------------------------------
Confidence            78999999999999964  689999999965 7889999765                                      


Q ss_pred             CcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhh-----cccccCCCCccccCcCCCC
Q psy17476        336 GCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN-----YHRHNSGGLASRLKTSPCD  410 (513)
Q Consensus       336 g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~-----~~~~~~~~~~~~~~~~~~~  410 (513)
                                             .+.++|++|..  +|.|++. ...|.++.+||+     +|...... ...+..    
T Consensus        93 -----------------------~~~v~H~~I~~--~g~~~~~-~~~F~sl~~Lv~dGl~~~~~~~~~~-~~~l~~----  141 (463)
T 3cxl_A           93 -----------------------GSQTRNFRLYY--DGKHFVG-EKRFESIHDLVTDGLITLYIETKAA-EYIAKM----  141 (463)
T ss_dssp             -----------------------SSSEEEEECEE--SSSEESS-SCCBSCHHHHHHHHHHHHHHHHHTH-HHHHHT----
T ss_pred             -----------------------CCEEEEEEEec--CCeEEEC-CCccCCHHHHHHHHHHhhhccCCCc-chhhcc----
Confidence                                   24566776655  4556654 478999999999     87765311 000000    


Q ss_pred             CCCCCcccCCCCccccCCcCceeEeEecccccceEEEEEEeCc-eeeEE------ee--cCCCC---HHHHHHHHHHHhc
Q psy17476        411 RPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAM------MK--EGTMS---EDDFIEEAKVMTR  478 (513)
Q Consensus       411 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~-~~v~~------~k--~~~~~---~~~f~~E~~il~~  478 (513)
                                    .+.    .+.+.||   ||.||+|.+... ..|++      ++  ....+   ...|.+|+.+|++
T Consensus       142 --------------~i~----~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~  200 (463)
T 3cxl_A          142 --------------TIN----PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKEN  200 (463)
T ss_dssp             --------------TSS----CSTTTSS---BCCC---------CCBGGGC-----------------------------
T ss_pred             --------------ccc----cccccCC---chhhhcccccccCCchhhhhccCcccccccccccccccccccccccccc
Confidence                          000    2333456   999999999753 33333      21  11111   2368999999999


Q ss_pred             CCCCceeceeeEEEeC
Q psy17476        479 LQHQNLVQLYGVCSKH  494 (513)
Q Consensus       479 l~HpNIV~l~g~~~~~  494 (513)
                      ++|||+++.+++....
T Consensus       201 ~~H~niv~~h~f~~~~  216 (463)
T 3cxl_A          201 EQIPKYEKIHNFKVHT  216 (463)
T ss_dssp             ------CBCCCEEEEC
T ss_pred             ccccccCCCcceEEee
Confidence            9999999999987653

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.46  E-value=8.8e-14  Score=135.47  Aligned_cols=80  Identities=20%  Similarity=0.321  Sum_probs=65.6

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      .+|++.+.||+|+||+||+|+.+.++..+|+|....       ..+.+.+|+++|++++|||||++++++.+++.+||||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            579999999999999999999987767666663221       1346899999999999999999999999999999999


Q ss_pred             ccCCCCc
Q psy17476        502 DTSSFRL  508 (513)
Q Consensus       502 E~~~~Gl  508 (513)
                      |||.|+|
T Consensus        93 Ey~~g~L   99 (275)
T 3hyh_A           93 EYAGNEL   99 (275)
T ss_dssp             ECCCEEH
T ss_pred             eCCCCCH
Confidence            9998776

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.45  E-value=8.3e-14  Score=136.79  Aligned_cols=78  Identities=27%  Similarity=0.351  Sum_probs=63.3

Q ss_pred             ceeEeEecccccceEEEEEEeCceeeEEeecC---CCC---HHHHHHHHHHHhcCCCCceeceeeEEEe----CCeeEEE
Q psy17476        431 LMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG---TMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSK----HRPIYIV  500 (513)
Q Consensus       431 ~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~---~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~----~~~~~lV  500 (513)
                      +++.++||+|+||.||+|.++.++..+|+|..   ...   .+.|.+|+++|++++|||||+++++|.+    +..+|||
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            46778899999999999999877665555522   122   2469999999999999999999999875    3568999


Q ss_pred             EccCCCCc
Q psy17476        501 TDTSSFRL  508 (513)
Q Consensus       501 ~E~~~~Gl  508 (513)
                      ||||+||-
T Consensus       108 mEy~~gg~  115 (290)
T 3fpq_A          108 TELMTSGT  115 (290)
T ss_dssp             EECCCSCB
T ss_pred             EeCCCCCC
Confidence            99999874

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.44  E-value=7.1e-13  Score=124.73  Aligned_cols=138  Identities=33%  Similarity=0.715  Sum_probs=107.5

Q ss_pred             EEEEeccCCCCCCCCCCCCCCCEEEEeecC-CccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcc
Q psy17476        127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDT-QEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLN  205 (513)
Q Consensus       127 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  205 (513)
                      .++++|+|.+...++|+|++||.+.|++.. +..||.+. ..|..|++|.+|+...                        
T Consensus         2 ~~~al~~~~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~~~-~~g~~G~~P~~yv~~~------------------------   56 (217)
T 1gri_A            2 EAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAE-LNGKDGFIPKNYIEMK------------------------   56 (217)
T ss_dssp             EEEECSCBCCCSSSCCCBCTTCEEEC------CCEEEEE-SSSCEEEEEGGGEECC------------------------
T ss_pred             EEEEeeccCCcCCCcCCCCCCCEEEEEeccCCCCeEeec-cCCccceECCcccccc------------------------
Confidence            378999999999999999999999999876 56788876 5789999999887521                        


Q ss_pred             cccccccCccccceeeeeeeeecCCCCCCCCCcceeccccccccccCCCCCcCCCCCCHHHHHHHHcCCCCCceEEEeec
Q psy17476        206 YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS  285 (513)
Q Consensus       206 ~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s  285 (513)
                                                                      +..|+++.++|..|+++|....++|.||+|.+
T Consensus        57 ------------------------------------------------~~~w~~g~isr~~ae~lL~~~~~~G~fLvR~S   88 (217)
T 1gri_A           57 ------------------------------------------------PHPWFFGKIPRAKAEEMLSKQRHDGAFLIRES   88 (217)
T ss_dssp             ------------------------------------------------CCSSBCTTCCHHHHHHHHHTCSSTTCEEEEEC
T ss_pred             ------------------------------------------------cchhhcccCCHHHHHHHHhccCCCceEEEEcc
Confidence                                                            12499999999999999977788999999999


Q ss_pred             CC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhccCCcEEEEecCCCCcEEEEEEeeeCCCccce
Q psy17476        286 ST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKH  364 (513)
Q Consensus       286 ~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h  364 (513)
                      ++ ++.|++|++.                                                             .+.++|
T Consensus        89 ~~~~g~~~LSv~~-------------------------------------------------------------~~~v~h  107 (217)
T 1gri_A           89 ESAPGDFSLSVKF-------------------------------------------------------------GNDVQH  107 (217)
T ss_dssp             SSSTTCEEEEEEE-------------------------------------------------------------TTEEEE
T ss_pred             CCCCCCEEEEEEE-------------------------------------------------------------CCEEEE
Confidence            65 7889888764                                                             245566


Q ss_pred             eEEEEcCCccEEEecCcccCChhhhhhcccccCCC
Q psy17476        365 YHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGG  399 (513)
Q Consensus       365 ~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~  399 (513)
                      ++|....++.|++. ...|.++.+|+.+|...+..
T Consensus       108 ~~I~~~~~g~~~~~-~~~f~sl~eLv~~~~~~~~~  141 (217)
T 1gri_A          108 FKVLRDGAGKYFLW-VVKFNSLNELVDYHRSTSVS  141 (217)
T ss_dssp             EEEEECSSSCEESS-SCEESSHHHHHHHHHHSCSS
T ss_pred             EEEEEcCCCCEEEe-eeEcCCHHHHHHhhhccccc
Confidence            66666666666655 56799999999999876543

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.43  E-value=8.4e-14  Score=139.29  Aligned_cols=81  Identities=20%  Similarity=0.150  Sum_probs=68.3

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccCC
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS  505 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~~  505 (513)
                      ...+.|.+.+.||+|+||.||+|+++.++..+|+|..... ..+.+|+.+|++++|||||++++++.+++.+|||||||+
T Consensus        55 ~~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~-~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~  133 (336)
T 4g3f_A           55 EEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-VFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE  133 (336)
T ss_dssp             BTTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT-TCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred             cchhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHH-HhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence            3446788899999999999999999887777766643322 123579999999999999999999999999999999999


Q ss_pred             CC
Q psy17476        506 FR  507 (513)
Q Consensus       506 ~G  507 (513)
                      ||
T Consensus       134 gg  135 (336)
T 4g3f_A          134 GG  135 (336)
T ss_dssp             TC
T ss_pred             CC
Confidence            86

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.43  E-value=1.5e-13  Score=135.77  Aligned_cols=80  Identities=20%  Similarity=0.314  Sum_probs=63.7

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceeeEEEeCC--------
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR--------  495 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~--------  495 (513)
                      ++|++.+.||+|+||+||+|+++.++..+|+|....  .   .+.|.+|+++|++++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            468999999999999999999987766666663221  1   246899999999999999999999997543        


Q ss_pred             ----eeEEEEccCCCCc
Q psy17476        496 ----PIYIVTDTSSFRL  508 (513)
Q Consensus       496 ----~~~lV~E~~~~Gl  508 (513)
                          .+|||||||+||-
T Consensus        85 ~~~~~l~ivmE~~~gg~  101 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKEN  101 (299)
T ss_dssp             --CEEEEEEEECCCSCC
T ss_pred             CCCcEEEEEEecCCCCc
Confidence                4799999999873

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.41  E-value=7.8e-14  Score=137.74  Aligned_cols=82  Identities=23%  Similarity=0.251  Sum_probs=62.2

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeC---ceeeEEeecCCC------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCe
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGTM------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~---~~~v~~~k~~~~------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  496 (513)
                      +..++|++.+.||+|+||+||+++...   ++..+|+|....      ....+.+|+++|++++|||||++++++.+++.
T Consensus        21 ~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~  100 (304)
T 3ubd_A           21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGK  100 (304)
T ss_dssp             CCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTE
T ss_pred             CCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCE
Confidence            345789999999999999999998742   345555553221      12368899999999999999999999999999


Q ss_pred             eEEEEccCCCC
Q psy17476        497 IYIVTDTSSFR  507 (513)
Q Consensus       497 ~~lV~E~~~~G  507 (513)
                      +|||||||+||
T Consensus       101 ~~ivmEy~~gg  111 (304)
T 3ubd_A          101 LYLILDFLRGG  111 (304)
T ss_dssp             EEEEECCCTTC
T ss_pred             EEEEEEcCCCC
Confidence            99999999986

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.38  E-value=3.4e-13  Score=138.48  Aligned_cols=82  Identities=21%  Similarity=0.400  Sum_probs=68.5

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC------HHHHHHHHHHHhcCCCCceeceeeEEEeC------Ce
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS------EDDFIEEAKVMTRLQHQNLVQLYGVCSKH------RP  496 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~------~~~f~~E~~il~~l~HpNIV~l~g~~~~~------~~  496 (513)
                      ++|++.+.||+|+||+||+|+++.++..+|+|.....      .+.+++|+++|++++|||||++++++...      ..
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            5799999999999999999999887777776643221      24688999999999999999999998643      57


Q ss_pred             eEEEEccCCCCccc
Q psy17476        497 IYIVTDTSSFRLGL  510 (513)
Q Consensus       497 ~~lV~E~~~~Gl~~  510 (513)
                      +|||||||+|+|..
T Consensus       134 ~~ivmE~~~g~L~~  147 (398)
T 4b99_A          134 VYVVLDLMESDLHQ  147 (398)
T ss_dssp             EEEEEECCSEEHHH
T ss_pred             EEEEEeCCCCCHHH
Confidence            89999999988743

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.38  E-value=1.6e-12  Score=140.16  Aligned_cols=136  Identities=24%  Similarity=0.402  Sum_probs=108.3

Q ss_pred             CcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhh---
Q psy17476        256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV---  331 (513)
Q Consensus       256 ~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~---  331 (513)
                      +|+++.++|..|+++|...+.+|+||||+|++ ++.|+||++.   ...++||+|.. ..|.|++.....+.++.++   
T Consensus         3 ~Wy~g~isr~~Ae~lL~~~~~~G~FLvR~S~~~~g~y~LSv~~---~~~v~H~~I~~-~~~~~~~~~~~~F~sl~eLv~~   78 (595)
T 3ps5_A            3 RWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRV---GDQVTHIRIQN-SGDFYDLYGGEKFATLTELVEY   78 (595)
T ss_dssp             SCCCSSCCHHHHHHHHHHHCCTTCEEEEECSSSTTSEEEEEEE---TTEEEEEEEEE-CSSCEESSSSCCBSSHHHHHHH
T ss_pred             CccCCCCCHHHHHHHHhhCCCCCEEEEeecCCCCCceEEEEEE---CCEEEEEEEEe-CCCcEEEecCccccchhhhhhh
Confidence            59999999999999998766899999999975 8899999998   67899999974 4455655554445444332   


Q ss_pred             ---------------------------------------------h---ccCCcEEEEecCCC-CcEEEEEEeeeC----
Q psy17476        332 ---------------------------------------------K---DKEGCFVVRNSSTK-GLYTLSLYTKVP----  358 (513)
Q Consensus       332 ---------------------------------------------l---~~~g~~LvR~s~~~-~~~~lsv~~~~~----  358 (513)
                                                                   |   ...|.||||.|++. |.|+||+.....    
T Consensus        79 y~~~~~~l~~~~g~~i~L~~P~~~~~p~~~~Wy~g~~~r~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~  158 (595)
T 3ps5_A           79 YTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGP  158 (595)
T ss_dssp             HHTTSSCCBCSSCCBCCCCCBCCCCCSCCSTTEEESCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEEEEESSST
T ss_pred             hccCccccccccccccccccccccccccccccccccCCHHHHHHHHhccCCCceEEEEecCCCCCcEEEEEEECCccccc
Confidence                                                         2   13688999999754 889999988642    


Q ss_pred             --CCccceeEEEEcCCccEEEecCcccCChhhhhhccccc
Q psy17476        359 --HPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHN  396 (513)
Q Consensus       359 --~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~  396 (513)
                        ...+.|++|.. .++.|++.+...|.++.+||+||...
T Consensus       159 ~~~~~v~H~~I~~-~~~~~~~~~~~~F~sl~~LV~~y~~~  197 (595)
T 3ps5_A          159 GSPLRVTHIKVMC-EGGRYTVGGLETFDSLTDLVEHFKKT  197 (595)
T ss_dssp             TSCEEEEEEEEBC-GGGCBBSSSSCCBSSHHHHHHHHHHS
T ss_pred             cCCCceEEEEEEE-eCCEEEEcCCcCCCCHHHHHHHHhcC
Confidence              12799999965 56778888888999999999999874

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.37  E-value=9.7e-13  Score=130.29  Aligned_cols=79  Identities=30%  Similarity=0.543  Sum_probs=60.2

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCCHHHHHHHH--HHHhcCCCCceeceeeEEEeCC----eeEEEEc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEA--KVMTRLQHQNLVQLYGVCSKHR----PIYIVTD  502 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~~~f~~E~--~il~~l~HpNIV~l~g~~~~~~----~~~lV~E  502 (513)
                      .+|.+.+.||+|+||+||+|++.+ ..||+++......+++.+|+  ..+.+++|||||+++|+|.+++    .+|||||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~g-~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWRG-EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETT-EEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECC-EEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            368899999999999999999854 34554444333444555554  4556889999999999998753    6899999


Q ss_pred             cCCCCc
Q psy17476        503 TSSFRL  508 (513)
Q Consensus       503 ~~~~Gl  508 (513)
                      ||+||-
T Consensus        82 y~~~gs   87 (303)
T 3hmm_A           82 YHEHGS   87 (303)
T ss_dssp             CCTTCB
T ss_pred             CCCCCc
Confidence            999864

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens}

Probab=99.34  E-value=2.2e-12  Score=107.81  Aligned_cols=94  Identities=17%  Similarity=0.340  Sum_probs=75.9

Q ss_pred             CCCcCCCCCCHHHHHHHHcCCCCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        254 PKAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       254 p~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      +++|+++.++|.+|+++|...+..|.||||++++.+.|+||++....                                 
T Consensus        14 ~epWff~~isR~eAE~lL~~~~~~GaFLVR~Se~~~~ySLSVR~~~~---------------------------------   60 (125)
T 3maz_A           14 PMPACFYTVSRKEATEMLQKNPSLGNMILRPGSDSRNYSITIRQEID---------------------------------   60 (125)
T ss_dssp             CCCTTBCCCCHHHHHHHHHHCGGGCSEEEEECTTSSSEEEEEEECSS---------------------------------
T ss_pred             CCCCCcCCCCHHHHHHHHhccCCCCcEEEEeCCCCCCEEEEEEecCC---------------------------------
Confidence            35799999999999998877677999999999876689999875221                                 


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEe--cCcccCChhhhhhcccccCCCCccccCc
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLS--EKHCCHSIPEVVNYHRHNSGGLASRLKT  406 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~--~~~~F~sl~eLi~~~~~~~~~~~~~~~~  406 (513)
                                               .+.|+||+|.+. +|.|++.  +...|+++.+||+||.+++++++.++..
T Consensus        61 -------------------------~~~VKHYkI~~~-~G~y~I~~~~~~~F~SL~eLV~yY~~~adGl~~~L~~  109 (125)
T 3maz_A           61 -------------------------IPRIKHYKVMSV-GQNYTIELEKPVTLPNLFSVIDYFVKETRGNLRPFIA  109 (125)
T ss_dssp             -------------------------SCEEEEEEEEEE-TTEEEECSSSCEEESSHHHHHHHHHHHTTTCCCBCCC
T ss_pred             -------------------------CCCEeeeEEEEe-CCEEEEecCCCcCcCCHHHHHHHHHhCCCcCcccccc
Confidence                                     245677777666 5778877  3567999999999999999999988753

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.31  E-value=1.3e-11  Score=131.31  Aligned_cols=138  Identities=23%  Similarity=0.374  Sum_probs=108.4

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChh----
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP----  329 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~----  329 (513)
                      .+|+++.++|..|+++|.....+|.||||+|++ ++.|+||++.   ...++||+|.. ..|.|.+.....+.++.    
T Consensus         4 ~~Wyhg~i~r~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~Lsv~~---~~~v~H~~I~~-~~~~~~l~~~~~F~sl~eLv~   79 (525)
T 2shp_A            4 RRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRR---NGAVTHIKIQN-TGDYYDLYGGEKFATLAELVQ   79 (525)
T ss_dssp             STTBCSSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEE---TTEEEEEEEEC-SSSCEEETTSCEESSHHHHHH
T ss_pred             CCcccCCCCHHHHHHHHHhCCCCCcEEeeccCCCCCcEEEEEEE---CCEEEEEEEEe-cCCeEEECCCCeECCHHHHHH
Confidence            469999999999999997656899999999976 8899999987   67899999965 44556554333333322    


Q ss_pred             --------------------------------------------hhhc---cCCcEEEEecCCC-CcEEEEEEeeeC---
Q psy17476        330 --------------------------------------------EVKD---KEGCFVVRNSSTK-GLYTLSLYTKVP---  358 (513)
Q Consensus       330 --------------------------------------------~~l~---~~g~~LvR~s~~~-~~~~lsv~~~~~---  358 (513)
                                                                  .+|.   ..|+||||.|++. |.|+|++.....   
T Consensus        80 ~y~~~~~~l~~~~g~~i~L~~Pv~~~dp~~~~w~~g~~~r~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~  159 (525)
T 2shp_A           80 YYMEHHGQLKEKNGDVIELKYPLNCADPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGE  159 (525)
T ss_dssp             HHHTCTTCSBSSSSCBCCCCEECCCCCCTTCTTBCCSCCHHHHHHHHHHTCCTTEEEEEECSSSTTCEEEEEEECC----
T ss_pred             HHHhCCccccccccccccccccccccccccceeecccCCHHHHHHHHhccCCCceEEEEecCCCCCCEEEEEEECCcccc
Confidence                                                        2332   5799999999865 789999987541   


Q ss_pred             ----CCccceeEEEEcCCccEEEecCcccCChhhhhhcccccC
Q psy17476        359 ----HPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNS  397 (513)
Q Consensus       359 ----~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~  397 (513)
                          ...++|+.|... .+.|++.....|.++.+|+++|...+
T Consensus       160 ~~~~~~~v~H~~I~~~-~g~~~l~~~~~F~sL~eLV~~y~~~~  201 (525)
T 2shp_A          160 SNDGKSKVTHVMIRCQ-ELKYDVGGGERFDSLTDLVEHYKKNP  201 (525)
T ss_dssp             -CCCCCEEEEEEEEEE-TTEEESSSSCCBSSHHHHHHHHHHSC
T ss_pred             ccccccceEEEEEEec-CCeEEECCCceeCcHHHHHHhhhccC
Confidence                237999999875 67788877789999999999998875

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.30  E-value=3.5e-12  Score=137.18  Aligned_cols=79  Identities=25%  Similarity=0.291  Sum_probs=69.3

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC----HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccC
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS----EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS  504 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~----~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~  504 (513)
                      ++|++.+.||+|+||.||+|..+.++..+|+|.....    .+.+.+|+++|+.++|||||+|++++.+...+|||||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            5799999999999999999999887777766643222    346889999999999999999999999999999999999


Q ss_pred             CCC
Q psy17476        505 SFR  507 (513)
Q Consensus       505 ~~G  507 (513)
                      +||
T Consensus       237 ~gg  239 (573)
T 3uto_A          237 SGG  239 (573)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            986

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.29  E-value=1.4e-11  Score=131.38  Aligned_cols=136  Identities=24%  Similarity=0.396  Sum_probs=106.6

Q ss_pred             CcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChh-----
Q psy17476        256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIP-----  329 (513)
Q Consensus       256 ~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~-----  329 (513)
                      +|+++.++|..|+++|...+.+|.||||+|++ ++.|+||++.   ...++||+|.. ..|.|.+.....+.++.     
T Consensus         3 ~Wyhg~i~r~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~Lsv~~---~~~v~H~~I~~-~~~~~~~~~~~~F~sl~~Lv~~   78 (532)
T 2b3o_A            3 RWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRV---GDQVTHIRIQN-SGDFYDLYGGEKFATLTELVEY   78 (532)
T ss_dssp             TTBCSSCCHHHHHHHHHHHCCTTEEEEEECSSSSSEEEEEEEE---TTEEEEEEEEC-SSSCEEETTSCEESCHHHHHHH
T ss_pred             CceeCCCCHHHHHHHHHhcCCCCCEEEecCCCCCCceEEEEEE---CCEEEEEEEEe-cCCEEEECCCcccCCHHHHHHH
Confidence            59999999999999998766899999999975 8899999997   67899999974 44556554333332222     


Q ss_pred             -------------------------------------------hhhc---cCCcEEEEecCCC-CcEEEEEEeeeC----
Q psy17476        330 -------------------------------------------EVKD---KEGCFVVRNSSTK-GLYTLSLYTKVP----  358 (513)
Q Consensus       330 -------------------------------------------~~l~---~~g~~LvR~s~~~-~~~~lsv~~~~~----  358 (513)
                                                                 .+|.   ..|.||||.|++. |.|+|++.....    
T Consensus        79 y~~~~~~l~~~~g~~~~L~~P~~~~~p~~~~w~~g~i~r~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~Lsv~~~~~~~~~  158 (532)
T 2b3o_A           79 YTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGP  158 (532)
T ss_dssp             HHTTCSCBCCSSSCCBCCCEECCCCCGGGCTTBCTTCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEEEEEC---
T ss_pred             HHhcccccccccCchhhccccccccccccccccccccchHHHHHHHhcCCCCceEEEecCCCCCCceEEEEEecCccccc
Confidence                                                       2332   5799999999755 889999988642    


Q ss_pred             --CCccceeEEEEcCCccEEEecCcccCChhhhhhccccc
Q psy17476        359 --HPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHN  396 (513)
Q Consensus       359 --~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~  396 (513)
                        ...++|++|... +|.|++.....|.++.+|+++|...
T Consensus       159 ~~~~~v~h~~I~~~-~g~~~l~~~~~F~sl~eLV~~y~~~  197 (532)
T 2b3o_A          159 GSPLRVTHIKVMCE-GGRYTVGGLETFDSLTDLVEHFKKT  197 (532)
T ss_dssp             -CCEEEEEEEEBCC-TTSBBSSSSCCBSSHHHHHHHHHHH
T ss_pred             cCCCceEEEEEEEc-CCceeeCCCcccCcHHHHHhhcccc
Confidence              127899999775 6778877678899999999999875

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.27  E-value=2e-11  Score=99.92  Aligned_cols=90  Identities=36%  Similarity=0.586  Sum_probs=74.4

Q ss_pred             CCcCCCCCCHHHHHHHHcCC-CCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQE-DKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~-~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      .+|+++.++|.+|+++|... .++|+||||+|++ ++.|+||++.                                   
T Consensus         2 ~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~-----------------------------------   46 (100)
T 1rja_A            2 EPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRD-----------------------------------   46 (100)
T ss_dssp             CCCBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECT-----------------------------------
T ss_pred             CCcccCCCCHHHHHHHHhccCCCCCEEEEEeCCCCCCCEEEEEEE-----------------------------------
Confidence            35999999999999999864 4799999999976 6788888754                                   


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                                .+.++|+.|....+|.|++.+...|.++.+||++|.....++...+.
T Consensus        47 --------------------------~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~l~~~L~   93 (100)
T 1rja_A           47 --------------------------TQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSLSHGLRLA   93 (100)
T ss_dssp             --------------------------TSSCEEEEEEECSSSCEEEETTEEESSHHHHHHHHHHCCTTSSSCCC
T ss_pred             --------------------------CCEEEEEEEEEcCCCcEEECCCCccCCHHHHHHHHhhCCCCCCCCCC
Confidence                                      35677888877667778888788999999999999999887766653

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.25  E-value=1.5e-11  Score=119.84  Aligned_cols=90  Identities=61%  Similarity=1.076  Sum_probs=72.8

Q ss_pred             cCCCCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        418 GLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      ......|++..++|++.+.||+|+||.||++.+.....++++..  .....+++.+|+++|++++||||+++++++.+..
T Consensus        13 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   92 (283)
T 3gen_A           13 GLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR   92 (283)
T ss_dssp             ---CCTTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             CCCCCCccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCC
Confidence            34457899999999999999999999999999887655554432  3335678999999999999999999999999999


Q ss_pred             eeEEEEccCCCC
Q psy17476        496 PIYIVTDTSSFR  507 (513)
Q Consensus       496 ~~~lV~E~~~~G  507 (513)
                      ..++|||||++|
T Consensus        93 ~~~lv~e~~~~~  104 (283)
T 3gen_A           93 PIFIITEYMANG  104 (283)
T ss_dssp             SEEEEECCCTTC
T ss_pred             CeEEEEeccCCC
Confidence            999999999876

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.25  E-value=5.2e-11  Score=100.96  Aligned_cols=96  Identities=35%  Similarity=0.701  Sum_probs=77.2

Q ss_pred             CCcCCCCCCHHHHHHHHcC-CCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQ-EDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~-~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ..|+++.++|.+|+++|.. ...+|.||||++++ .+.|+||++.                                   
T Consensus        16 ~~WyhG~isR~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~-----------------------------------   60 (121)
T 2dly_A           16 EPWFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLD-----------------------------------   60 (121)
T ss_dssp             CSSBCSSCCHHHHHHHHTSSSCCTTCEEEEECSSSSSCEEEEEES-----------------------------------
T ss_pred             CCccccCCCHHHHHHHHhcCCCCCCEEEEEcCCCCCCceEEEEEE-----------------------------------
Confidence            4599999999999998875 35789999999965 7788888764                                   


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCCCC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRP  412 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~~~  412 (513)
                                                .+.++|++|....+|.|++.+...|.++.+||+||.....++...+. .|+++.
T Consensus        61 --------------------------~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLV~~y~~~~~~l~~~L~-~P~~~~  113 (121)
T 2dly_A           61 --------------------------EGVVKHYRIRRLDEGGFFLTRRKVFSTLNEFVNYYTTTSDGLCVKLE-KPCLKI  113 (121)
T ss_dssp             --------------------------SSCEEEEEEEECSSSCEEEETTEEESSHHHHHHHHTTCCSSSSSCCC-SBCCCC
T ss_pred             --------------------------CCeEEEEEEEEcCCCCEEECCCCccCCHHHHHHHHhhCCCCCceeCC-eecCCC
Confidence                                      34667777777667778888778999999999999999888877774 444443

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.24  E-value=1.8e-11  Score=118.45  Aligned_cols=86  Identities=51%  Similarity=0.886  Sum_probs=73.8

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      ..|.+..++|++.+.||+|+||.||+|.+.....+++++.  .....+++.+|+++|++++||||+++++++.+....++
T Consensus         3 ~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   82 (269)
T 4hcu_A            3 GKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICL   82 (269)
T ss_dssp             --CBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             ccEEeChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEE
Confidence            4688999999999999999999999999877666554442  23346789999999999999999999999999999999


Q ss_pred             EEccCCCC
Q psy17476        500 VTDTSSFR  507 (513)
Q Consensus       500 V~E~~~~G  507 (513)
                      |||||++|
T Consensus        83 v~e~~~~~   90 (269)
T 4hcu_A           83 VFEFMEHG   90 (269)
T ss_dssp             EEECCTTC
T ss_pred             EEEeCCCC
Confidence            99999987

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A*

Probab=99.24  E-value=2.8e-11  Score=99.85  Aligned_cols=90  Identities=23%  Similarity=0.463  Sum_probs=71.4

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|.+|+++|....++|+||||+|++ .+.|+||++.                                    
T Consensus         4 ~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~------------------------------------   47 (104)
T 1d4t_A            4 VAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLY------------------------------------   47 (104)
T ss_dssp             CTTBCCSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEE------------------------------------
T ss_pred             CceEccCCCHHHHHHHHHhcCCCCEEEEeeCCCCCCCEEEEEEE------------------------------------
Confidence            469999999999999997555889999999974 7889888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEec-----CcccCChhhhhhcccccCCCCccccC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSE-----KHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~-----~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                               .+.++|++|....+|.|++..     ...|.++.+||+||.....++...+.
T Consensus        48 -------------------------~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~~y~~~~~~l~~~L~   99 (104)
T 1d4t_A           48 -------------------------HGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKPDQGIVIPLQ   99 (104)
T ss_dssp             -------------------------TTEEEEEEEEECTTSCEEECBCTTSCCCCBSSHHHHHHHHTSSSSSSSSCCC
T ss_pred             -------------------------CCeEEEEEEEECCCCeEEEeccCCCCCcccCCHHHHHHHHhhCCCCCeEECC
Confidence                                     245566666655566677663     67899999999999999877766553

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.23  E-value=2.3e-11  Score=123.38  Aligned_cols=79  Identities=15%  Similarity=0.160  Sum_probs=65.9

Q ss_pred             cCceeEeEecccccceEEEEEEe---CceeeEEeecC--CCCHHHHHHHHHHHhcC-CCCceeceeeEEEeCCeeEEEEc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWR---GSIDVAMMKEG--TMSEDDFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~---~~~~v~~~k~~--~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      +.|++.+.||+|+||+||+|+.+   .+...+|+|..  ......+.+|+++|+.+ +|||||++++++.+.+.+|||||
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE  100 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP  100 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence            57999999999999999999875   23444555532  23345789999999998 69999999999999999999999


Q ss_pred             cCCCC
Q psy17476        503 TSSFR  507 (513)
Q Consensus       503 ~~~~G  507 (513)
                      ||+||
T Consensus       101 ~~~g~  105 (361)
T 4f9c_A          101 YLEHE  105 (361)
T ss_dssp             CCCCC
T ss_pred             CCCcc
Confidence            99986

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A

Probab=99.23  E-value=2.1e-11  Score=102.05  Aligned_cols=91  Identities=32%  Similarity=0.568  Sum_probs=75.0

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|.+|+++|.. ..+|.||||+|++ .+.|+||++.                                    
T Consensus         5 ~~Wyhg~isR~~Ae~lL~~-~~~G~FLVR~S~~~~g~y~LSv~~------------------------------------   47 (112)
T 3k2m_A            5 HSWYHGPVSRNAAEYLLSS-GINGSFLVRESESSPGQRSISLRY------------------------------------   47 (112)
T ss_dssp             STTEEESCCHHHHHHHTTT-CCTTEEEEEECSSSTTCEEEEEEE------------------------------------
T ss_pred             CcceeeCCCHHHHHHHhcc-CCCceEEEEeCCCCCCCEEEEEEe------------------------------------
Confidence            4699999999999999974 6899999999965 7888888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTS  407 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~  407 (513)
                                               .+.++|++|....+|.|++.+...|.++.+||++|....+++...+..+
T Consensus        48 -------------------------~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~~~l~~~L~~P   96 (112)
T 3k2m_A           48 -------------------------EGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYP   96 (112)
T ss_dssp             -------------------------TTEEEEEEEEECTTSCEESSTTCCBSSHHHHHHHHHHCCTTSSSCCCEE
T ss_pred             -------------------------CCcEEEEEEEECCCCcEEECCCCeECCHHHHHHHHhhCCCCCccCCCCC
Confidence                                     3456777777666677777777899999999999999988888877543

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1

Probab=99.23  E-value=3.8e-11  Score=98.83  Aligned_cols=89  Identities=21%  Similarity=0.399  Sum_probs=70.5

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|.+|+++|....++|+||||+|++ .+.|+||++.                                    
T Consensus         3 ~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~------------------------------------   46 (103)
T 1i3z_A            3 LPYYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSF------------------------------------   46 (103)
T ss_dssp             CTTEESSCCHHHHHHHHHTTCSTTEEEEEECSSSTTCEEEEEEC------------------------------------
T ss_pred             CccccCCCCHHHHHHHHhhcCCCceEEEEeCCCCCCCEEEEEEE------------------------------------
Confidence            469999999999999998656899999999965 7789888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEe-----cCcccCChhhhhhcccccCCCCcccc
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLS-----EKHCCHSIPEVVNYHRHNSGGLASRL  404 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~-----~~~~F~sl~eLi~~~~~~~~~~~~~~  404 (513)
                                               .+.++|+.|....+|.|++.     ....|.++.+||++|.....++...+
T Consensus        47 -------------------------~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~~y~~~~~~l~~~L   97 (103)
T 1i3z_A           47 -------------------------KKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQELVSKYGKPGQGLVVHL   97 (103)
T ss_dssp             -------------------------SSSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHHHHHTTSSSSSSSSCC
T ss_pred             -------------------------CCEEEEEEEEECCCCeEEEeccCCCCCcccCCHHHHHHHHhhCCCCCeEEc
Confidence                                     24556666665556666665     35789999999999999877766555

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.21  E-value=3.2e-11  Score=100.51  Aligned_cols=96  Identities=44%  Similarity=0.894  Sum_probs=75.8

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      .+|+++.++|.+|+++|...+++|.||||++++.+.|+||++.....                                 
T Consensus        11 ~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~---------------------------------   57 (110)
T 2ekx_A           11 YDWFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVN---------------------------------   57 (110)
T ss_dssp             SSSBCCSCCHHHHHHHHHHTCCTTEEEEEECSSTTCEEEEECCCCSS---------------------------------
T ss_pred             CCeecCCCCHHHHHHHHhccCCCceEEEEecCCCCCEEEEEEecccc---------------------------------
Confidence            56999999999999999876689999999996688899997642100                                 


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccC
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                            ...+.++|++|....+|.|++.+...|.++.+||+||.....++..++.
T Consensus        58 ----------------------~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~l~~~L~  106 (110)
T 2ekx_A           58 ----------------------DKKGTVKHYHVHTNAENKLYLAENYCFDSIPKLIHYHQHNSAGMITRLR  106 (110)
T ss_dssp             ----------------------CSSCCCEEEECEECTTCCEESSTTCCCSCHHHHHHHHHHSCCSSSCCCC
T ss_pred             ----------------------CCCCcEEEEEEEECCCCCEEECCCCccCCHHHHHHHHeeCCCCCceecC
Confidence                                  0024677887777666778887778999999999999998877766653

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A*

Probab=99.21  E-value=4.4e-11  Score=98.81  Aligned_cols=95  Identities=29%  Similarity=0.541  Sum_probs=75.4

Q ss_pred             CCcCCCCCCHHHHHHHHcC-CCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQ-EDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~-~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ..|+++.++|.+|+++|.. ..++|+||||+|++ ++.|+||++.....                               
T Consensus         4 ~~Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~~-------------------------------   52 (105)
T 1lkk_A            4 EPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQN-------------------------------   52 (105)
T ss_dssp             CTTBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEETT-------------------------------
T ss_pred             CceecCCCCHHHHHHHHHhcCCCCceEEEEECCCCCCcEEEEEEEcccC-------------------------------
Confidence            4699999999999999975 35899999999975 78898887652110                               


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                               ..+.++|++|....+|.|++.+...|.++.+||+||.....+++..+.
T Consensus        53 -------------------------~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LI~~y~~~~~~l~~~L~  100 (105)
T 1lkk_A           53 -------------------------QGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLS  100 (105)
T ss_dssp             -------------------------TEEEEEEEEEEECTTSCEESSTTSCBSSHHHHHHHHHHCCTTSSSCCC
T ss_pred             -------------------------CCCcEEEEEEEECCCCCEEECCCceeCCHHHHHHHHhhCCCCCccCCc
Confidence                                     014577888877667778887778999999999999999888877664

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A

Probab=99.19  E-value=6.6e-11  Score=99.30  Aligned_cols=94  Identities=28%  Similarity=0.544  Sum_probs=76.0

Q ss_pred             CCcCCCCCCHHHHHHHHcCC-CCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQE-DKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~-~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ..|+++.++|.+|+++|... .++|+||||+|++ ++.|+||++....                                
T Consensus        12 ~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~--------------------------------   59 (114)
T 1blj_A           12 EKWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITT--------------------------------   59 (114)
T ss_dssp             SSSBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCCT--------------------------------
T ss_pred             CCccCCCCCHHHHHHHHhhCCCCCceEEEEeCCCCCCCEEEEEEEecC--------------------------------
Confidence            46999999999999999753 5899999999975 7889998764110                                


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                               ..+.++|++|....+|.|++.+...|.++.+||++|.....++...+.
T Consensus        60 -------------------------~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~l~~~L~  107 (114)
T 1blj_A           60 -------------------------QGEVVKHYKIRSLDNGGYYISPRITFPTLQALVQHYSKKGDGLCQKLT  107 (114)
T ss_dssp             -------------------------TTCBCCCEEEEEETTTEEEEETTEEESSHHHHHHHHHHCCSSSSSCCC
T ss_pred             -------------------------CCCcEEEEEEEEcCCCCEEECCCcccCCHHHHHHHhhhCCCCCceecC
Confidence                                     024678888877667778888788999999999999999888877664

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.19  E-value=4.7e-11  Score=115.30  Aligned_cols=85  Identities=56%  Similarity=0.954  Sum_probs=73.4

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeCceeeEEee--cCCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMK--EGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k--~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      .|++..++|++.+.||+|+||.||+|.+++...++++.  ......+++.+|+.+|++++||||+++++++......++|
T Consensus         2 ~~~l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (268)
T 3sxs_A            2 HMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV   81 (268)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred             ceEechhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEE
Confidence            46788899999999999999999999888765555443  2334567899999999999999999999999999999999


Q ss_pred             EccCCCC
Q psy17476        501 TDTSSFR  507 (513)
Q Consensus       501 ~E~~~~G  507 (513)
                      ||||++|
T Consensus        82 ~e~~~~~   88 (268)
T 3sxs_A           82 TEYISNG   88 (268)
T ss_dssp             EECCTTC
T ss_pred             EEccCCC
Confidence            9999987

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.19  E-value=3.3e-11  Score=130.06  Aligned_cols=81  Identities=14%  Similarity=0.067  Sum_probs=67.3

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHH---HHHHhcCCCCceeceeeEEEeCCe
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEE---AKVMTRLQHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E---~~il~~l~HpNIV~l~g~~~~~~~  496 (513)
                      .-++|.+.+.||+|+||+||+++.+.++..+|+|...+       ....+.+|   +.+++.++|||||++++++.+.+.
T Consensus       187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~  266 (689)
T 3v5w_A          187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK  266 (689)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred             chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence            44689999999999999999999998888887774321       22234444   667788899999999999999999


Q ss_pred             eEEEEccCCCC
Q psy17476        497 IYIVTDTSSFR  507 (513)
Q Consensus       497 ~~lV~E~~~~G  507 (513)
                      +|||||||+||
T Consensus       267 lylVmEy~~GG  277 (689)
T 3v5w_A          267 LSFILDLMNGG  277 (689)
T ss_dssp             EEEEECCCCSC
T ss_pred             EEEEEecCCCC
Confidence            99999999986

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A

Probab=99.19  E-value=8e-11  Score=100.80  Aligned_cols=90  Identities=23%  Similarity=0.463  Sum_probs=71.8

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      ..|+++.++|.+|+++|....++|.||||+|++ .+.|+||++.                                    
T Consensus         4 ~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~------------------------------------   47 (128)
T 1ka6_A            4 VAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLY------------------------------------   47 (128)
T ss_dssp             CSSBCCSCCHHHHHHHHHHHCCTTCEEEEECSSSTTCEEEEEES------------------------------------
T ss_pred             CcccCCCCCHHHHHHHHhcCCCCCEEEEeecCCCCCCEEEEEEe------------------------------------
Confidence            469999999999999997545889999999974 7888888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEec-----CcccCChhhhhhcccccCCCCccccC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSE-----KHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~-----~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                               .+.++|++|....+|.|++..     ...|.++.+||+||.....++...+.
T Consensus        48 -------------------------~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~~y~~~~~gl~~~L~   99 (128)
T 1ka6_A           48 -------------------------HGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKPDQGIVIPLQ   99 (128)
T ss_dssp             -------------------------SSCEEEEEEEECTTSCEEEECSTTSCCCEESSHHHHHHHTTSSCSSSSSCCC
T ss_pred             -------------------------CCEEEEEEEEECCCCeEEEeecCCCCCCccCCHHHHHHHHhhCCCCCcEEcC
Confidence                                     245666666665566677763     67899999999999998877776664

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.18  E-value=6.1e-11  Score=117.25  Aligned_cols=85  Identities=29%  Similarity=0.423  Sum_probs=72.3

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeecC-CCC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG-TMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~-~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      +.+..++|.+.+.||+|+||.||++.+..++..+++|.. ...   .+.|.+|+++|++++|||||++++++.+++..++
T Consensus         5 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   84 (310)
T 3s95_A            5 RIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNF   84 (310)
T ss_dssp             EEECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             eeeChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEE
Confidence            346678999999999999999999999877666666632 222   3468999999999999999999999999999999


Q ss_pred             EEccCCCCc
Q psy17476        500 VTDTSSFRL  508 (513)
Q Consensus       500 V~E~~~~Gl  508 (513)
                      |||||++|-
T Consensus        85 v~e~~~~~~   93 (310)
T 3s95_A           85 ITEYIKGGT   93 (310)
T ss_dssp             EEECCTTCB
T ss_pred             EEEecCCCc
Confidence            999999853

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.18  E-value=4.1e-11  Score=116.96  Aligned_cols=87  Identities=37%  Similarity=0.756  Sum_probs=75.6

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCC---CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCee
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT---MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~---~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      .+.|++...+|++.+.||+|+||.||+|.+..+...+++|...   ...+.+.+|+.+|++++||||+++++++......
T Consensus         5 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   84 (288)
T 3kfa_A            5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF   84 (288)
T ss_dssp             CCTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             hhcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence            4689999999999999999999999999998766666555322   2346799999999999999999999999999999


Q ss_pred             EEEEccCCCC
Q psy17476        498 YIVTDTSSFR  507 (513)
Q Consensus       498 ~lV~E~~~~G  507 (513)
                      ++|||||++|
T Consensus        85 ~~v~e~~~~~   94 (288)
T 3kfa_A           85 YIITEFMTYG   94 (288)
T ss_dssp             EEEEECCTTE
T ss_pred             EEEEEcCCCC
Confidence            9999999964

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.17  E-value=9.9e-11  Score=98.96  Aligned_cols=90  Identities=24%  Similarity=0.520  Sum_probs=71.4

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      ..|+++.++|..|+++|....++|.||||.|++ .+.|+||++.                                    
T Consensus        10 ~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~------------------------------------   53 (119)
T 2ysx_A           10 PCWNHGNITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLY------------------------------------   53 (119)
T ss_dssp             CSSEEESCCHHHHHHHHHHHCCTTEEEEEECSSCTTSEEEEEEC------------------------------------
T ss_pred             CccccCCCCHHHHHHHHhhcCCCCEEEEEeCCCCCCCEEEEEEE------------------------------------
Confidence            469999999999999998645899999999976 7889998765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEec-----CcccCChhhhhhcccccCCCCccccC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSE-----KHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~-----~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                               .+.++|++|....+|.|++..     ...|.++.+||+||.....++...+.
T Consensus        54 -------------------------~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~eLV~~y~~~~~~l~~~L~  105 (119)
T 2ysx_A           54 -------------------------RNCVYTYRILPNEDDKFTVQASEGVSMRFFTKLDQLIEFYKKENMGLVTHLQ  105 (119)
T ss_dssp             -------------------------SSCEEEEEEEECTTSCEEECCSCSSSCCCBSSHHHHHHHTTSSSSSSSSCCC
T ss_pred             -------------------------CCEEEEEEEEEcCCCCEEEeccCCcCCcccCCHHHHHHHHhhCCCCCCeECC
Confidence                                     245566666655556666654     36899999999999998887776664

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jwo_A

Probab=99.17  E-value=9.4e-11  Score=95.54  Aligned_cols=88  Identities=25%  Similarity=0.471  Sum_probs=72.0

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|.+|+++|.. ..+|+||||+|++ .+.|++|++.                                    
T Consensus         5 ~~Wyhg~isr~~Ae~lL~~-~~~G~FLVR~S~~~~g~y~LSv~~------------------------------------   47 (98)
T 3us4_A            5 MPWFHGKISGQEAVQQLQP-PEDGLFLVRESARHPGDYVLCVSF------------------------------------   47 (98)
T ss_dssp             CTTBCCSCCHHHHHHHTCS-CCTTCEEEEECSSSTTCEEEEEEE------------------------------------
T ss_pred             CcccCCCCCHHHHHHHccC-CCCcEEEEEeCCCCCCcEEEEEEE------------------------------------
Confidence            4699999999999999975 5899999999965 7788888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                               .+.++|++|.. .++.|++.+...|.++.+||++|....++++.++.
T Consensus        48 -------------------------~~~v~H~~I~~-~~~~~~~~~~~~F~sl~~Lv~~y~~~~~~l~~~L~   93 (98)
T 3us4_A           48 -------------------------GRDVIHYRVLH-RDGHLTIDEAVFFCNLMDMVEHYSKDKGAICTKLV   93 (98)
T ss_dssp             -------------------------TTEEEEEEEEE-ETTEEESSSSSEESSHHHHHHHHHHCCTTSSSCCC
T ss_pred             -------------------------CCceEEEEEEE-eCCEEEECCCCccCCHHHHHHHhhhCCCCCeEcCC
Confidence                                     34566777765 34567777778899999999999999888877764

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B

Probab=99.16  E-value=8.3e-11  Score=99.36  Aligned_cols=96  Identities=44%  Similarity=0.799  Sum_probs=75.1

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      .+|+++.++|.+|+++|.....+|+||||+|...+.|+||++.....                                 
T Consensus         9 ~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~---------------------------------   55 (118)
T 3s9k_A            9 YEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAII---------------------------------   55 (118)
T ss_dssp             STTBCTTCCHHHHHHHHHHHCCTTCEEEEECSSTTCEEEEEEECCSC---------------------------------
T ss_pred             CceecCCCCHHHHHHHHHhcCCCCeEEEEeeCCCCCEEEEEEecccc---------------------------------
Confidence            46999999999999999875679999999995588899998762100                                 


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEE--EcCCccEEEecCcccCChhhhhhcccccCCCCccccC
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIK--QNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~--~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                            ...+.++|+.|.  ...++.|++.+...|.++.+||+||.....++...+.
T Consensus        56 ----------------------~~~~~v~H~~I~~~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~~~l~~~L~  106 (118)
T 3s9k_A           56 ----------------------SENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNGGGLVTRLR  106 (118)
T ss_dssp             ----------------------SSSCEEEEEEEEECSCSSCCEEEECSCCCSCHHHHHHHHHHCCTTSSSCCC
T ss_pred             ----------------------cCCCceEEEEEeEEECCCCCEEECCCcccCCHHHHHHHheeCCCCCccCCC
Confidence                                  002456777773  3456778888888999999999999999888777664

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.16  E-value=9.1e-11  Score=113.96  Aligned_cols=88  Identities=44%  Similarity=0.743  Sum_probs=73.6

Q ss_pred             CCCCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCe
Q psy17476        419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  496 (513)
                      +..++|++..++|++.+.||+|+||.||+|...+...++++..  .....+.|.+|+++|++++||||+++++++.. +.
T Consensus         3 ~~~~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~   81 (279)
T 1qpc_A            3 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP   81 (279)
T ss_dssp             TTTCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             cchhhcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CC
Confidence            4467899999999999999999999999999876655554432  33356789999999999999999999999874 56


Q ss_pred             eEEEEccCCCC
Q psy17476        497 IYIVTDTSSFR  507 (513)
Q Consensus       497 ~~lV~E~~~~G  507 (513)
                      .++||||+++|
T Consensus        82 ~~~v~e~~~~~   92 (279)
T 1qpc_A           82 IYIITEYMENG   92 (279)
T ss_dssp             CEEEEECCTTC
T ss_pred             cEEEEecCCCC
Confidence            89999999875

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.15  E-value=8.2e-11  Score=113.33  Aligned_cols=85  Identities=53%  Similarity=0.914  Sum_probs=72.7

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      .|.+..++|++.+.||+|+||.||++.+.....++++..  .....+.+.+|++++++++||||+++++++...+..++|
T Consensus         2 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (267)
T 3t9t_A            2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV   81 (267)
T ss_dssp             -CBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             ceEEchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEE
Confidence            588899999999999999999999999876655544432  233457899999999999999999999999999999999


Q ss_pred             EccCCCC
Q psy17476        501 TDTSSFR  507 (513)
Q Consensus       501 ~E~~~~G  507 (513)
                      |||+++|
T Consensus        82 ~e~~~~~   88 (267)
T 3t9t_A           82 TEFMEHG   88 (267)
T ss_dssp             ECCCTTC
T ss_pred             EeCCCCC
Confidence            9999976

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.15  E-value=4.3e-11  Score=101.14  Aligned_cols=90  Identities=30%  Similarity=0.550  Sum_probs=70.7

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      ..|+++.++|.+|+++|.. ..+|.||||++++ .+.|+||++.   .                                
T Consensus        16 ~~WyhG~isR~~Ae~lL~~-~~~G~FLVR~S~~~~g~y~LSv~~---~--------------------------------   59 (119)
T 2ecd_A           16 HSWYHGPVSRSAAEYLLSS-LINGSFLVRESESSPGQLSISLRY---E--------------------------------   59 (119)
T ss_dssp             SSSEEEECCHHHHHHHHHT-SCTTBEEEEEESSSTTEEEEEEEC---S--------------------------------
T ss_pred             CccccCCCCHHHHHHHhcC-CCCCeEEEEeCCCCCCCEEEEEEE---C--------------------------------
Confidence            4699999999999999974 6789999999975 7889999875   2                                


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCc
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKT  406 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~  406 (513)
                                                +.++|++|....+|.|++.....|.++.+||+||....+++...+..
T Consensus        60 --------------------------~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~gl~~~L~~  106 (119)
T 2ecd_A           60 --------------------------GRVYHYRINTTADGKVYVTAESRFSTLAELVHHHSTVADGLVTTLHY  106 (119)
T ss_dssp             --------------------------SCEEEECCCCCSSSCCCCCSSCCCSSHHHHHHHHHHCCTTSSSCCCB
T ss_pred             --------------------------CeEEEEEEEEcCCCCEEEcCCCcCCCHHHHHHHHhhCCCCCceECCC
Confidence                                      34455555544455566666678999999999999988887777753

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*

Probab=99.14  E-value=5.2e-11  Score=98.56  Aligned_cols=95  Identities=32%  Similarity=0.592  Sum_probs=75.3

Q ss_pred             CCcCCCCCCHHHHHHHHcCC-CCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQE-DKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~-~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ..|+++.++|.+|+++|... .++|+||||+|++ ++.|+||++.....                               
T Consensus         5 ~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~~-------------------------------   53 (106)
T 1aot_F            5 EEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDM-------------------------------   53 (106)
T ss_dssp             SSSCCBSCCHHHHHHHHHTTTCCTTEECCBCBSSSSSBBCCEEECCBTT-------------------------------
T ss_pred             CccCCCCCCHHHHHHHHhhCCCCCcEEEEEeCCCCCCCEEEEEEecccC-------------------------------
Confidence            46999999999999998754 4799999999975 78898887642100                               


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                               ..+.++|++|....+|.|++.+...|.++.+||+||....++++..+.
T Consensus        54 -------------------------~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~l~~~L~  101 (106)
T 1aot_F           54 -------------------------KGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLSSRLV  101 (106)
T ss_dssp             -------------------------TBCCEEECCBEEETTTEEEEETTEEESSHHHHHHHHTTCCTTSSSCSC
T ss_pred             -------------------------CCCcEEEEEEEEeCCCCEEECCCCccCCHHHHHHHhccCCCCCcEeec
Confidence                                     024577887777666778888788999999999999999888877664

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.14  E-value=1.1e-10  Score=114.30  Aligned_cols=81  Identities=7%  Similarity=-0.046  Sum_probs=68.9

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC----H---HHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS----E---DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~----~---~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      -...|++.+.||+|+||.||+|.+..++..+++|.....    .   +.|.+|+.++++++|||||++++++...+..||
T Consensus        29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  108 (286)
T 3uqc_A           29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV  108 (286)
T ss_dssp             TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence            346799999999999999999999876666666643221    1   568999999999999999999999999999999


Q ss_pred             EEccCCCC
Q psy17476        500 VTDTSSFR  507 (513)
Q Consensus       500 V~E~~~~G  507 (513)
                      |||||+||
T Consensus       109 v~e~~~g~  116 (286)
T 3uqc_A          109 VAEWIRGG  116 (286)
T ss_dssp             EEECCCEE
T ss_pred             EEEecCCC
Confidence            99999975

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.14  E-value=2.4e-10  Score=96.45  Aligned_cols=94  Identities=24%  Similarity=0.425  Sum_probs=73.6

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      ..|+++.++|..|+++|.....+|.||||++++ .+.|+||++.                                    
T Consensus        16 ~~WyhG~isR~~Ae~lL~~~g~~G~FLVR~S~~~~g~y~LSv~~------------------------------------   59 (119)
T 2gsb_A           16 KIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRT------------------------------------   59 (119)
T ss_dssp             CSSBCCSSCHHHHHHHHHHTCCSSEEEEEECSSSTTCEEEEEEC------------------------------------
T ss_pred             CCcccCCCCHHHHHHHHhhcCCCCeEEEEeCCCCCCceEEEEEE------------------------------------
Confidence            469999999999999998766789999999976 7788888764                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCCC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR  411 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~~  411 (513)
                                               .+.++|++|....+|.|++. ...|.++.+||+||..........+. .|+++
T Consensus        60 -------------------------~~~v~H~~I~~~~~g~~~l~-~~~F~sl~~LI~~y~~~~l~~~~~L~-~Pv~~  110 (119)
T 2gsb_A           60 -------------------------NENIQRFKICPTPNNQFMMG-GRYYNSIGDIIDHYRKEQIVEGYYLK-EPVPM  110 (119)
T ss_dssp             -------------------------SSCBCCCCEEEETTTEEEES-SCCBSCHHHHHHHHTTSCSBTTBCCC-CCCCC
T ss_pred             -------------------------CCEEEEEEEEEcCCCCEEEC-CcccCCHHHHHHHHhhCccCCCCEeC-CccCC
Confidence                                     35677888877667777765 47899999999999998765555553 34443

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens}

Probab=99.14  E-value=8e-11  Score=100.34  Aligned_cols=96  Identities=47%  Similarity=0.846  Sum_probs=75.2

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      .+|+++.++|..|+++|...+.+|.||||+|+..+.|+||++.....                                 
T Consensus        11 ~~WyhG~isR~eAe~lL~~~g~~G~FLVR~Ss~~g~y~LSv~~~~~~---------------------------------   57 (125)
T 2ge9_A           11 YEWYSKHMTRSQAEQLLKQEGKEGGFIVRDSSKAGKYTVSVFAKSTG---------------------------------   57 (125)
T ss_dssp             SSSEETTCCHHHHHHHHHHHTCTTEEEEEECSSSCCEEEEEEESSSS---------------------------------
T ss_pred             CCccccCCCHHHHHHHHhhcCCCceEEEEecCCCCCEEEEEEecccc---------------------------------
Confidence            56999999999999999875689999999996688899998752100                                 


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccC
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                            ...+.++|++|....+|.|++.+...|.++.+||++|.....++...+.
T Consensus        58 ----------------------~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLV~~y~~~~~~l~~~L~  106 (125)
T 2ge9_A           58 ----------------------DPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPELINYHQHNSAGLISRLK  106 (125)
T ss_dssp             ----------------------STTCEEEEEECEEETTTEEESSTTSCBSSHHHHHHHHHCCCTTCSCCSS
T ss_pred             ----------------------CCCCeEEEEEEEEcCCCCEEECCCCcCCCHHHHHHHhhhCCCCCceeCC
Confidence                                  0024567777776666777777778899999999999998877766664

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A

Probab=99.14  E-value=1.2e-10  Score=96.26  Aligned_cols=88  Identities=28%  Similarity=0.539  Sum_probs=71.8

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|..|+++|.. .++|.||||+|++ .+.|+||++.                                    
T Consensus         8 ~~Wyhg~isr~~Ae~lL~~-~~~G~FLVR~S~~~~g~~~LSv~~------------------------------------   50 (106)
T 3eaz_A            8 MPWFHGKITREQAERLLYP-PETGLFLVRESTNYPGDYTLCVSS------------------------------------   50 (106)
T ss_dssp             CTTBCCSCCHHHHHHHTCS-CCTTEEEEEECTTSTTCEEEEEEE------------------------------------
T ss_pred             CCCcCCCCCHHHHHHHhCC-CCCCEEEEEECCCCCCcEEEEEEe------------------------------------
Confidence            4699999999999999975 5799999999975 7889888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                               .+.++|++|.. .++.|++.+...|.++.+||+||....++++..+.
T Consensus        51 -------------------------~~~v~H~~I~~-~~g~~~l~~~~~F~sl~~Lv~~y~~~~~gl~~~L~   96 (106)
T 3eaz_A           51 -------------------------DGKVEHYRIMY-HASKLSIDEEVYFENLMQLVEHYTSDADGLCTRLI   96 (106)
T ss_dssp             -------------------------TTEEEEEECEE-ETTEEESSSSSCBSSHHHHHHHHHHCCTTSSSCCC
T ss_pred             -------------------------CCceEEEEEEe-cCCEEEECCCCccCCHHHHHHHHhhCCCCCCeecC
Confidence                                     24566666654 35667777778899999999999999888887764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.14  E-value=9.8e-11  Score=115.62  Aligned_cols=88  Identities=26%  Similarity=0.532  Sum_probs=73.2

Q ss_pred             CCCccccCCcCceeEeEecccccceEEEEEEeC-----ceeeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceee
Q psy17476        420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYG  489 (513)
Q Consensus       420 ~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-----~~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g  489 (513)
                      ....|++...+|.+.+.||+|+||.||++....     ....+++|....  .   .+.+.+|+++|++++|||||++++
T Consensus        14 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~   93 (314)
T 2ivs_A           14 EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYG   93 (314)
T ss_dssp             CCTTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred             CCcccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEE
Confidence            356789999999999999999999999998743     234555554322  1   246889999999999999999999


Q ss_pred             EEEeCCeeEEEEccCCCC
Q psy17476        490 VCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       490 ~~~~~~~~~lV~E~~~~G  507 (513)
                      ++...+..++|||||++|
T Consensus        94 ~~~~~~~~~lv~e~~~~~  111 (314)
T 2ivs_A           94 ACSQDGPLLLIVEYAKYG  111 (314)
T ss_dssp             EECSSSSCEEEEECCTTC
T ss_pred             EEecCCceEEEEeecCCC
Confidence            999999999999999975

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=8.7e-11  Score=100.22  Aligned_cols=97  Identities=41%  Similarity=0.836  Sum_probs=76.0

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      .+|+++.++|..|+++|...+.+|.||||+++..+.|+||++.....                                 
T Consensus        16 ~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~---------------------------------   62 (125)
T 2dm0_A           16 YEWYHRNITRNQAEHLLRQESKEGAFIVRDSRHLGSYTISVFMGARR---------------------------------   62 (125)
T ss_dssp             SSSBCCSCCHHHHHHHHHHHCSTTCBCEEEETTEEEEEEEEECCCSS---------------------------------
T ss_pred             CCcccCCCCHHHHHHHHhhcCCCCEEEEEecCCCCCEEEEEEecccc---------------------------------
Confidence            56999999999999999865588999999996678888887652100                                 


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCc
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKT  406 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~  406 (513)
                                            .....++|++|....+|.|++.+...|.++.+||+||.....++...+..
T Consensus        63 ----------------------~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLV~~y~~~~~~l~~~L~~  112 (125)
T 2dm0_A           63 ----------------------STEAAIKHYQIKKNDSGQWYVAERHAFQSIPELIWYHQHNAAGLMTRLRY  112 (125)
T ss_dssp             ----------------------SSSCCEEEEEEEECTTCCEESSSSCCCSSHHHHHHHHTTCCCSSSCCCCS
T ss_pred             ----------------------CCCCcEEEEEEEEcCCCCEEECCCCccCCHHHHHHHhhhCCCCCccCCCC
Confidence                                  00246778888776667788777789999999999999998888777643

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.13  E-value=5.3e-11  Score=122.83  Aligned_cols=84  Identities=21%  Similarity=0.287  Sum_probs=72.4

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCe
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  496 (513)
                      +.+..++|.+.+.||+|+||.||+++.+.++.++++|...       ...+.+.+|+.+|+.++|||||++++++.+...
T Consensus        64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~  143 (410)
T 3v8s_A           64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY  143 (410)
T ss_dssp             HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence            4566789999999999999999999998877777776432       123458899999999999999999999999999


Q ss_pred             eEEEEccCCCC
Q psy17476        497 IYIVTDTSSFR  507 (513)
Q Consensus       497 ~~lV~E~~~~G  507 (513)
                      +|||||||+||
T Consensus       144 ~~lV~E~~~gg  154 (410)
T 3v8s_A          144 LYMVMEYMPGG  154 (410)
T ss_dssp             EEEEECCCTTE
T ss_pred             EEEEEeCCCCC
Confidence            99999999886

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.13  E-value=1.3e-10  Score=118.18  Aligned_cols=86  Identities=28%  Similarity=0.519  Sum_probs=71.0

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeC-------ceeeEEeecCCC--C---HHHHHHHHHHHhcC-CCCceecee
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG-------SIDVAMMKEGTM--S---EDDFIEEAKVMTRL-QHQNLVQLY  488 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-------~~~v~~~k~~~~--~---~~~f~~E~~il~~l-~HpNIV~l~  488 (513)
                      ..|++..++|.+.+.||+|+||.||+|.+..       ....+++|....  .   .+.+.+|+.+|+++ +|||||+++
T Consensus        74 ~~~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~  153 (370)
T 2psq_A           74 PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL  153 (370)
T ss_dssp             TTTBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEE
T ss_pred             ccccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence            4578888999999999999999999998752       233455553322  1   24689999999999 899999999


Q ss_pred             eEEEeCCeeEEEEccCCCC
Q psy17476        489 GVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       489 g~~~~~~~~~lV~E~~~~G  507 (513)
                      ++|...+.+|||||||++|
T Consensus       154 ~~~~~~~~~~lv~e~~~~g  172 (370)
T 2psq_A          154 GACTQDGPLYVIVEYASKG  172 (370)
T ss_dssp             EEECSSSSCEEEEECCTTC
T ss_pred             EEEccCCCEEEEEEcCCCC
Confidence            9999999999999999985

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.13  E-value=1.5e-10  Score=117.34  Aligned_cols=82  Identities=21%  Similarity=0.267  Sum_probs=70.7

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeecC---CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG---TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~---~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      ...++|.+.+.||+|+||.||++....++..+++|..   ....+.+.+|+.++++++|||||++++++.+...++||||
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            3557899999999999999999999877666666632   2334678999999999999999999999999999999999


Q ss_pred             cCCCC
Q psy17476        503 TSSFR  507 (513)
Q Consensus       503 ~~~~G  507 (513)
                      ||++|
T Consensus        97 ~~~~~  101 (361)
T 3uc3_A           97 YASGG  101 (361)
T ss_dssp             CCCSC
T ss_pred             eCCCC
Confidence            99885

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.13  E-value=1.4e-10  Score=115.52  Aligned_cols=80  Identities=21%  Similarity=0.257  Sum_probs=69.0

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccC
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS  504 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~  504 (513)
                      .++|.+.+.||+|+||.||+|....++..+++|.....   ...+.+|+.+|+.++|||||++++++.+.+.++||||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   83 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence            35799999999999999999999877776666643322   346889999999999999999999999999999999999


Q ss_pred             CCC
Q psy17476        505 SFR  507 (513)
Q Consensus       505 ~~G  507 (513)
                      +||
T Consensus        84 ~g~   86 (321)
T 1tki_A           84 SGL   86 (321)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            985

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.13  E-value=1.1e-10  Score=119.36  Aligned_cols=86  Identities=20%  Similarity=0.244  Sum_probs=74.1

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecC-------CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG-------TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~-------~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      .+.+..++|++.+.||+|+||.||++....++..+++|..       ....+.+.+|+++|++++|||||++++++.+.+
T Consensus         9 ~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~   88 (384)
T 4fr4_A            9 NEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE   88 (384)
T ss_dssp             CCCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             CCCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            4456778999999999999999999999887777776632       223457899999999999999999999999999


Q ss_pred             eeEEEEccCCCCc
Q psy17476        496 PIYIVTDTSSFRL  508 (513)
Q Consensus       496 ~~~lV~E~~~~Gl  508 (513)
                      .+|+|||||+||-
T Consensus        89 ~~~lv~e~~~gg~  101 (384)
T 4fr4_A           89 DMFMVVDLLLGGD  101 (384)
T ss_dssp             EEEEEECCCTTEE
T ss_pred             EEEEEEecCCCCc
Confidence            9999999999863

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*

Probab=99.12  E-value=1.4e-10  Score=94.10  Aligned_cols=81  Identities=32%  Similarity=0.687  Sum_probs=65.2

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|.+|+++|.....+|+||||+|++ ++.|+||++.                                    
T Consensus         3 ~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~------------------------------------   46 (96)
T 1jyr_A            3 MAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKF------------------------------------   46 (96)
T ss_dssp             CTTBCCSCCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEE------------------------------------
T ss_pred             cceeccCCCHHHHHHHHhcCCCCcEEEEEecCCCCCCEEEEEEe------------------------------------
Confidence            359999999999999998765699999999975 7889888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNS  397 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~  397 (513)
                                               .+.++|++|....+|.|++.+ ..|.++.+||++|...+
T Consensus        47 -------------------------~~~v~H~~I~~~~~g~~~l~~-~~F~sl~~LV~~y~~~~   84 (96)
T 1jyr_A           47 -------------------------GNDVQHFKVLRDGAGKYFLWV-VKFNSLNELVDYHRSTS   84 (96)
T ss_dssp             -------------------------TTEEEEEECEECTTSCEESSS-CEESSHHHHHHHTTSSC
T ss_pred             -------------------------CCeEEEEEEEEcCCCCEEECC-cccCCHHHHHHHHhhCC
Confidence                                     245666666665566676654 78999999999999875

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.12  E-value=1.1e-10  Score=114.23  Aligned_cols=80  Identities=23%  Similarity=0.375  Sum_probs=68.5

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC---CC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT---MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~---~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      ++|++.+.||+|+||.||+|....++..+++|...   ..   .+.+.+|+.+|++++|||||++++++.+++.++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            47899999999999999999998776666655321   11   2578899999999999999999999999999999999


Q ss_pred             cCCCCc
Q psy17476        503 TSSFRL  508 (513)
Q Consensus       503 ~~~~Gl  508 (513)
                      ||++++
T Consensus        82 ~~~~~l   87 (292)
T 3o0g_A           82 FCDQDL   87 (292)
T ss_dssp             CCSEEH
T ss_pred             cCCCCH
Confidence            999876

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.12  E-value=1.3e-10  Score=117.22  Aligned_cols=80  Identities=28%  Similarity=0.317  Sum_probs=69.1

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecC---------CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG---------TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIY  498 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~---------~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  498 (513)
                      .+.|++.+.||+|+||.||+|..+.++..+++|..         ....+.+.+|+.+|++++|||||++++++.+.+.+|
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            35789999999999999999999877666666632         123567999999999999999999999999999999


Q ss_pred             EEEccCCCC
Q psy17476        499 IVTDTSSFR  507 (513)
Q Consensus       499 lV~E~~~~G  507 (513)
                      ||||||+||
T Consensus       103 lv~e~~~g~  111 (351)
T 3c0i_A          103 MVFEFMDGA  111 (351)
T ss_dssp             EEEECCSSC
T ss_pred             EEEeCCCCC
Confidence            999999975

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.12  E-value=2.1e-10  Score=95.60  Aligned_cols=81  Identities=32%  Similarity=0.579  Sum_probs=65.4

Q ss_pred             CcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       256 ~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      .|+++.++|.+|+++|. ..++|+||||+|++ ++.|+||++.                                     
T Consensus        20 ~Wyhg~isR~~Ae~lL~-~~~~G~FLVR~S~~~~g~y~LSv~~-------------------------------------   61 (111)
T 2eo3_A           20 AWYMGPVSRQEAQTRLQ-GQRHGMFLVRDSSTCPGDYVLSVSE-------------------------------------   61 (111)
T ss_dssp             HHEEESCCHHHHHHHHS-SCCTTCEEEEECSSSSSCEEEEEEE-------------------------------------
T ss_pred             CcccCCCCHHHHHHHhc-CCCCceEEEEeecCCCCCEEEEEEe-------------------------------------
Confidence            39999999999999997 46899999999976 6788888765                                     


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCC
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGG  399 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~  399 (513)
                                              .+.++|++|....++.|++. ...|.++.+||++|......
T Consensus        62 ------------------------~~~v~H~~I~~~~~g~~~l~-~~~F~sl~~LV~~y~~~~l~  101 (111)
T 2eo3_A           62 ------------------------NSRVSHYIINSLPNRRFKIG-DQEFDHLPALLEFYKIHYLD  101 (111)
T ss_dssp             ------------------------TTEEEEEEEEEETTTEEEET-TCCBSSHHHHHHHHTTSCSS
T ss_pred             ------------------------CCeEEEEEEEEcCCCCEEEC-CcccCCHHHHHHHHhhCCCC
Confidence                                    24566777766556667764 57899999999999987643

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.11  E-value=1.3e-10  Score=114.44  Aligned_cols=81  Identities=15%  Similarity=0.160  Sum_probs=68.9

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeec----CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE----GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~----~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      ...|++.+.||+|+||.||+|....++..+++|.    .....+.+.+|+.+|++++|||||++++++...+.+++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            4678999999999999999999876666555552    233456789999999999999999999999999999999999


Q ss_pred             CCCCc
Q psy17476        504 SSFRL  508 (513)
Q Consensus       504 ~~~Gl  508 (513)
                      |+||-
T Consensus        99 ~~~~~  103 (297)
T 3fxz_A           99 LAGGS  103 (297)
T ss_dssp             CTTCB
T ss_pred             CCCCC
Confidence            98864

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.11  E-value=1.6e-10  Score=114.51  Aligned_cols=88  Identities=33%  Similarity=0.588  Sum_probs=69.1

Q ss_pred             CCCCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeec--CCCCH---HHHHHHHHHHhcCCCCceeceeeEEEe
Q psy17476        419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSE---DDFIEEAKVMTRLQHQNLVQLYGVCSK  493 (513)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~--~~~~~---~~f~~E~~il~~l~HpNIV~l~g~~~~  493 (513)
                      +..+.|+++..+|++.+.||+|+||.||+|.+.+. .++++..  .....   +.|.+|+++|++++|||||++++++..
T Consensus        27 ~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  105 (309)
T 3p86_A           27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ  105 (309)
T ss_dssp             -----CBCCGGGEEEEEEEEECSSEEEEEEEETTE-EEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CCcccccCChhHceeeeEeecCCCeEEEEEEECCC-cEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE
Confidence            33557788999999999999999999999987543 3433332  22222   468999999999999999999999999


Q ss_pred             CCeeEEEEccCCCC
Q psy17476        494 HRPIYIVTDTSSFR  507 (513)
Q Consensus       494 ~~~~~lV~E~~~~G  507 (513)
                      .+.+++|||||++|
T Consensus       106 ~~~~~lv~e~~~~~  119 (309)
T 3p86_A          106 PPNLSIVTEYLSRG  119 (309)
T ss_dssp             TTCCEEEEECCTTC
T ss_pred             CCceEEEEecCCCC
Confidence            99999999999986

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.11  E-value=2.2e-10  Score=113.71  Aligned_cols=89  Identities=28%  Similarity=0.516  Sum_probs=73.4

Q ss_pred             CCCCccccCCcCceeEeEecccccceEEEEEEeC-----ceeeEEeecCCC--C---HHHHHHHHHHHhcCCCCceecee
Q psy17476        419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLY  488 (513)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-----~~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~  488 (513)
                      +..+.|++..++|++.+.||+|+||.||+|.+.+     ....+++|....  .   ...|.+|+.+|++++||||++++
T Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   94 (322)
T 1p4o_A           15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL   94 (322)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence            3456889999999999999999999999998763     234455553222  1   23588999999999999999999


Q ss_pred             eEEEeCCeeEEEEccCCCC
Q psy17476        489 GVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       489 g~~~~~~~~~lV~E~~~~G  507 (513)
                      +++.+.+..++|||||++|
T Consensus        95 ~~~~~~~~~~lv~e~~~~~  113 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRG  113 (322)
T ss_dssp             EEECSSSSCEEEEECCTTC
T ss_pred             EEEccCCccEEEEEeCCCC
Confidence            9999999999999999974

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens}

Probab=99.11  E-value=5.8e-11  Score=100.11  Aligned_cols=94  Identities=17%  Similarity=0.206  Sum_probs=73.2

Q ss_pred             CCCCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhh
Q psy17476        253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV  331 (513)
Q Consensus       253 ~p~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~  331 (513)
                      ...+|+++.++|..|+++|....++|+||||+|++ ++.|+||++....                               
T Consensus        19 ~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~-------------------------------   67 (118)
T 2el8_A           19 LETPSCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHN-------------------------------   67 (118)
T ss_dssp             SSSCTTCCCCCHHHHHHHHHHSSTTCSBEEEECCSSSSSEEEEECCCBT-------------------------------
T ss_pred             cCCCceecCCCHHHHHHHHhhCCCCcEEEEeeCCCCCCceEEEEEEecC-------------------------------
Confidence            45679999999999999997555899999999976 7889999764211                               


Q ss_pred             hccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCccc--CChhhhhhcccccCCCCcccc
Q psy17476        332 KDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCC--HSIPEVVNYHRHNSGGLASRL  404 (513)
Q Consensus       332 l~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F--~sl~eLi~~~~~~~~~~~~~~  404 (513)
                                                +.+.++|++|.. .++.|++.+...|  +++.+||+||...+.+++.++
T Consensus        68 --------------------------~~~~v~H~~I~~-~~g~~~i~~~~~F~~~sL~eLV~~y~~~~~gl~~~L  115 (118)
T 2el8_A           68 --------------------------GTHVVRHYKVKR-EGPKYVIDVEQPFSCTSLDAVVNYFVSHTKKALVPF  115 (118)
T ss_dssp             --------------------------TBCCCEEECBCC-BTTBCCBSSSSCCCCSSHHHHHHHHHHHSSSCCCBC
T ss_pred             --------------------------CCCcEEEEEEEE-cCCEEEEeCCCeECCCCHHHHHHHHhhCCCCCeEee
Confidence                                      013566666655 4566777667788  999999999999988887655

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} SCOP: d.93.1.1 PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ...

Probab=99.11  E-value=3.3e-10  Score=95.26  Aligned_cols=82  Identities=30%  Similarity=0.665  Sum_probs=66.8

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|..|+++|....++|.||||+|++ .+.|+||++.                                    
T Consensus         6 ~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~------------------------------------   49 (117)
T 3ov1_A            6 HPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKF------------------------------------   49 (117)
T ss_dssp             CTTBCCSCCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEE------------------------------------
T ss_pred             CCcccCCCCHHHHHHHHhCCCCCCcEEEEeCCCCCCCEEEEEec------------------------------------
Confidence            469999999999999998866899999999965 7889888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSG  398 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~  398 (513)
                                               .+.++|++|....+|.|++.+ ..|.++.+||++|...+.
T Consensus        50 -------------------------~~~v~H~~I~~~~~g~~~l~~-~~F~sl~eLV~~y~~~~l   88 (117)
T 3ov1_A           50 -------------------------GNDVQHFKVLRDGAGKYFLWV-VKFNSLNELVDYHRSTSV   88 (117)
T ss_dssp             -------------------------TTEEEEEECEECTTSCEESSS-CEESSHHHHHHHTTTSCS
T ss_pred             -------------------------CCceEEEEEEECCCCeEEECC-CCcCCHHHHHHHHhhCCC
Confidence                                     245667777665666677655 689999999999999754

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.11  E-value=1.3e-10  Score=116.34  Aligned_cols=80  Identities=21%  Similarity=0.368  Sum_probs=67.9

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCC---CC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT---MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~---~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      ..+|++.+.||+|+||.||+|.+..++..+++|...   ..   .+.+.+|+++|+.++|||||++++++.....+|+||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            457999999999999999999997766666655321   12   246889999999999999999999999999999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      |||+||
T Consensus        94 e~~~~~   99 (328)
T 3fe3_A           94 EYASGG   99 (328)
T ss_dssp             CCCTTC
T ss_pred             ECCCCC
Confidence            999886

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.10  E-value=1.8e-10  Score=115.73  Aligned_cols=81  Identities=20%  Similarity=0.178  Sum_probs=70.3

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecC-------CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG-------TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~-------~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      ..++|++.+.||+|+||.||+++.+.++..+++|..       ....+.+.+|+++|++++|||||++++++.+.+.+||
T Consensus         3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   82 (337)
T 1o6l_A            3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence            456899999999999999999999877776766632       2234578999999999999999999999999999999


Q ss_pred             EEccCCCC
Q psy17476        500 VTDTSSFR  507 (513)
Q Consensus       500 V~E~~~~G  507 (513)
                      |||||+||
T Consensus        83 v~E~~~gg   90 (337)
T 1o6l_A           83 VMEYANGG   90 (337)
T ss_dssp             EEECCTTC
T ss_pred             EEeCCCCC
Confidence            99999986

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.10  E-value=1.9e-10  Score=115.14  Aligned_cols=85  Identities=25%  Similarity=0.492  Sum_probs=71.2

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeC-----ceeeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceeeEEE
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYGVCS  492 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-----~~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g~~~  492 (513)
                      .|++..++|++.+.||+|+||.||+|.+.+     +...+++|....  .   .+.|.+|+.+|++++||||+++++++.
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  120 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA  120 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            467788999999999999999999999874     234555554322  1   246899999999999999999999999


Q ss_pred             eCCeeEEEEccCCCC
Q psy17476        493 KHRPIYIVTDTSSFR  507 (513)
Q Consensus       493 ~~~~~~lV~E~~~~G  507 (513)
                      ..+..+||||||++|
T Consensus       121 ~~~~~~lv~e~~~~~  135 (343)
T 1luf_A          121 VGKPMCLLFEYMAYG  135 (343)
T ss_dssp             SSSSCEEEEECCTTC
T ss_pred             cCCceEEEEecCCCC
Confidence            999999999999985

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A

Probab=99.10  E-value=2.4e-10  Score=96.36  Aligned_cols=90  Identities=29%  Similarity=0.546  Sum_probs=69.0

Q ss_pred             CCcCCCCCCHHHHHHHHcCC-CCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQE-DKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~-~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ++|+++.++|.+|+++|... ..+|.||||++++ .+.|+||++.                                   
T Consensus        14 ~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~-----------------------------------   58 (117)
T 3pqz_A           14 QLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCH-----------------------------------   58 (117)
T ss_dssp             CTTBCCSCCHHHHHHHHHHTTCCTTEEEEEECCC-CCCEEEEEEE-----------------------------------
T ss_pred             CccccCCCCHHHHHHHHhcCCCCCCEEEEEecCCCCCcEEEEEEe-----------------------------------
Confidence            45999999999999999764 4599999999976 6889888765                                   


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEc-CCccEEEe---cCcccCChhhhhhcccccCCCCccccC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQN-SRGEFFLS---EKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~-~~~~~~i~---~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                                .+.++|++|... .+|.+++.   ....|.++.+||+||..+.+++..++.
T Consensus        59 --------------------------~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~LV~~y~~~~~~l~~~L~  109 (117)
T 3pqz_A           59 --------------------------LQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVEFHQLNRGILPCLLR  109 (117)
T ss_dssp             --------------------------TTEEEEEEEEEECCTTCCEEESSTTSSCBSSHHHHHHHHHHCCTTSSSCCC
T ss_pred             --------------------------CCeeEEEEEEEecCCCCEEEEECCCCcccCCHHHHHHHHhhCCCCCcEECC
Confidence                                      244556666553 34443332   357899999999999999888877764

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A

Probab=99.10  E-value=2.3e-10  Score=94.40  Aligned_cols=90  Identities=29%  Similarity=0.617  Sum_probs=67.0

Q ss_pred             CCcCCCCCCHHHHHHHHcCCC-CCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQED-KEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~-~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ..|+++.++|.+|+++|...+ ++|+||||+|++ .+.|+||++.                                   
T Consensus         5 ~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~-----------------------------------   49 (105)
T 1nrv_A            5 QHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCH-----------------------------------   49 (105)
T ss_dssp             STTBCTTCCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEE-----------------------------------
T ss_pred             CcccCCCCCHHHHHHHHHhcCCCCceEEEEeCCCCCCCEEEEEEe-----------------------------------
Confidence            469999999999999997643 799999999975 7889999765                                   


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcC-Ccc-EE-Ee-cCcccCChhhhhhcccccCCCCccccC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNS-RGE-FF-LS-EKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~-~~~-~~-i~-~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                                .+.++|++|.... +|. ++ +. ....|.++.+||++|..+..++...+.
T Consensus        50 --------------------------~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~LV~~y~~~~~~l~~~L~  100 (105)
T 1nrv_A           50 --------------------------HQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLVDFYQLNKGVLPCKLK  100 (105)
T ss_dssp             --------------------------TTEEEEEEEEEC-----CCEESSTTSSCBSSHHHHHHHHTTCCTTSSSCCC
T ss_pred             --------------------------CCEEEEEEEEEEcCCCCEEEEEcCCCcccCCHHHHHHHhhhCCCCCcEeCC
Confidence                                      2345566665532 332 33 33 257899999999999998887776664

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.10  E-value=9.5e-11  Score=121.90  Aligned_cols=85  Identities=21%  Similarity=0.235  Sum_probs=72.5

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      .+.+..++|++.+.||+|+||+||+|+++.+...+++|....       ....+.+|+.+|+.++|||||+++++|.+.+
T Consensus        68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~  147 (437)
T 4aw2_A           68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN  147 (437)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred             cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence            345677899999999999999999999988777777664321       1234889999999999999999999999999


Q ss_pred             eeEEEEccCCCC
Q psy17476        496 PIYIVTDTSSFR  507 (513)
Q Consensus       496 ~~~lV~E~~~~G  507 (513)
                      .+|||||||+||
T Consensus       148 ~~~lV~Ey~~gg  159 (437)
T 4aw2_A          148 NLYLVMDYYVGG  159 (437)
T ss_dssp             EEEEEECCCTTC
T ss_pred             EEEEEEecCCCC
Confidence            999999999886

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.10  E-value=1.4e-10  Score=117.71  Aligned_cols=80  Identities=20%  Similarity=0.250  Sum_probs=68.0

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCC---C-------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCee
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT---M-------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~---~-------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      .+.|.+.+.||+|+||.||++..+.++..+++|...   .       ..+.+.+|+.+|++++|||||++++++.+...+
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            357999999999999999999998766666555211   1       246799999999999999999999999999999


Q ss_pred             EEEEccCCCC
Q psy17476        498 YIVTDTSSFR  507 (513)
Q Consensus       498 ~lV~E~~~~G  507 (513)
                      |||||||+||
T Consensus        91 ~lv~e~~~gg  100 (361)
T 2yab_A           91 VLILELVSGG  100 (361)
T ss_dssp             EEEEECCCSC
T ss_pred             EEEEEcCCCC
Confidence            9999999876

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.09  E-value=1.5e-10  Score=115.62  Aligned_cols=85  Identities=28%  Similarity=0.398  Sum_probs=69.3

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCce---eeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSI---DVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~---~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      +++...+|.+.+.||+|+||.||+|.+....   ..+++|....  .   .+.|.+|+.+|++++|||||++++++.+..
T Consensus        44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  123 (325)
T 3kul_A           44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR  123 (325)
T ss_dssp             CBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG
T ss_pred             cccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            4677889999999999999999999986432   2244443221  2   246899999999999999999999999999


Q ss_pred             eeEEEEccCCCCc
Q psy17476        496 PIYIVTDTSSFRL  508 (513)
Q Consensus       496 ~~~lV~E~~~~Gl  508 (513)
                      ..|||||||++|-
T Consensus       124 ~~~lv~e~~~~~~  136 (325)
T 3kul_A          124 LAMIVTEYMENGS  136 (325)
T ss_dssp             CCEEEEECCTTCB
T ss_pred             ccEEEeeCCCCCc
Confidence            9999999998853

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.09  E-value=1.7e-10  Score=113.32  Aligned_cols=82  Identities=22%  Similarity=0.333  Sum_probs=65.2

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC------------------------------HHHHHHHHHHH
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS------------------------------EDDFIEEAKVM  476 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~------------------------------~~~f~~E~~il  476 (513)
                      ..++|++.+.||+|+||.||+|....++..+++|.....                              .+.+.+|+++|
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   90 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL   90 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence            346899999999999999999998776666655532111                              24588999999


Q ss_pred             hcCCCCceeceeeEEEe--CCeeEEEEccCCCCc
Q psy17476        477 TRLQHQNLVQLYGVCSK--HRPIYIVTDTSSFRL  508 (513)
Q Consensus       477 ~~l~HpNIV~l~g~~~~--~~~~~lV~E~~~~Gl  508 (513)
                      ++++|||||++++++..  ...+|||||||++|.
T Consensus        91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~  124 (298)
T 2zv2_A           91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP  124 (298)
T ss_dssp             HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCB
T ss_pred             HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCc
Confidence            99999999999999987  568999999999864

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.09  E-value=4.7e-11  Score=121.96  Aligned_cols=86  Identities=20%  Similarity=0.179  Sum_probs=66.6

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCCHHHHHHHHHHHhcCCCCceeceeeEEEe----------
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSK----------  493 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~----------  493 (513)
                      ++....+|++.+.||+|+||.||+|....++..+|+|....+.....+|+.+|+.++|||||++++++..          
T Consensus         2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~   81 (383)
T 3eb0_A            2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ   81 (383)
T ss_dssp             ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred             CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence            3456678999999999999999999998776766666443344445689999999999999999999854          


Q ss_pred             ----------------------------CCeeEEEEccCCCCcc
Q psy17476        494 ----------------------------HRPIYIVTDTSSFRLG  509 (513)
Q Consensus       494 ----------------------------~~~~~lV~E~~~~Gl~  509 (513)
                                                  ...++||||||+++|.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~  125 (383)
T 3eb0_A           82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLH  125 (383)
T ss_dssp             ----------------------------CCEEEEEECCCSEEHH
T ss_pred             cccccccccccccccccccccccccCCCceEEEEEEecCCccHH
Confidence                                        3348999999998763

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.08  E-value=5.8e-10  Score=94.16  Aligned_cols=83  Identities=29%  Similarity=0.526  Sum_probs=66.0

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      ..|+++.++|.+|+++|. ..++|.||||++++...|+||++.                                     
T Consensus        16 ~~WyhG~isR~~Ae~lL~-~~~~G~FLVR~S~~~~~y~LSv~~-------------------------------------   57 (119)
T 2cs0_A           16 PEWFHGAISREDAENLLE-SQPLGSFLIRVSHSHVGYTLSYKA-------------------------------------   57 (119)
T ss_dssp             CSSBCSSCCHHHHHHHHH-TSCTTCEEEEECSSSSSEEEEECC-------------------------------------
T ss_pred             CCccccCCCHHHHHHHhc-CCCCCEEEEEecCCCCCEEEEEEE-------------------------------------
Confidence            469999999999999996 468999999999763338888754                                     


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEe-cCcccCChhhhhhcccccCCC
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLS-EKHCCHSIPEVVNYHRHNSGG  399 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~-~~~~F~sl~eLi~~~~~~~~~  399 (513)
                                              .+.++|++|....+|.|++. +...|.++.+||+||......
T Consensus        58 ------------------------~~~v~H~~I~~~~~g~~~l~~~~~~F~sl~eLV~~y~~~~l~   99 (119)
T 2cs0_A           58 ------------------------QSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIE   99 (119)
T ss_dssp             ------------------------SSSCEEEEEEECTTSCEECTTCSCCBSSHHHHHHHHTTSCCS
T ss_pred             ------------------------CCEEEEEEEEEcCCCcEEEecCCCcCCCHHHHHHHHhhCcCC
Confidence                                    24567777777666677776 467899999999999987643

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.08  E-value=1.8e-10  Score=114.41  Aligned_cols=67  Identities=19%  Similarity=0.349  Sum_probs=53.5

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC-----CCHHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-----MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-----~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      ++|++.+.||+|+||.||+|+++.++..+++|...     ...+.+.+|+++|++++|||||+++++|.+..
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   77 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETP   77 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECC
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEec
Confidence            46889999999999999999998666655555321     22457999999999999999999999986643

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.08  E-value=1.5e-10  Score=117.83  Aligned_cols=84  Identities=29%  Similarity=0.509  Sum_probs=68.2

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEe---CceeeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWR---GSIDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~---~~~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      .++...+|.+.+.||+|+||.||+|+++   .....+++|....  .   .+.|.+|+.+|++++|||||++++++....
T Consensus        40 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~  119 (373)
T 2qol_A           40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK  119 (373)
T ss_dssp             CBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             hhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC
Confidence            4667789999999999999999999876   2334445553222  1   246999999999999999999999999999


Q ss_pred             eeEEEEccCCCC
Q psy17476        496 PIYIVTDTSSFR  507 (513)
Q Consensus       496 ~~~lV~E~~~~G  507 (513)
                      .++||||||++|
T Consensus       120 ~~~lv~e~~~~~  131 (373)
T 2qol_A          120 PVMIVTEYMENG  131 (373)
T ss_dssp             SCEEEEECCTTC
T ss_pred             ceEEEEeCCCCC
Confidence            999999999875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.08  E-value=1.7e-10  Score=112.60  Aligned_cols=83  Identities=29%  Similarity=0.456  Sum_probs=68.8

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCce-------eeEEeecCC----CCHHHHHHHHHHHhcCCCCceeceeeEEEe
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGSI-------DVAMMKEGT----MSEDDFIEEAKVMTRLQHQNLVQLYGVCSK  493 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~-------~v~~~k~~~----~~~~~f~~E~~il~~l~HpNIV~l~g~~~~  493 (513)
                      ++..++|.+.+.||+|+||.||+|.+..+.       ..+++|...    ...+.|.+|+.+|++++|||||++++++..
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   83 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC   83 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence            466789999999999999999999987643       234444322    224579999999999999999999999999


Q ss_pred             CCeeEEEEccCCCC
Q psy17476        494 HRPIYIVTDTSSFR  507 (513)
Q Consensus       494 ~~~~~lV~E~~~~G  507 (513)
                      .+..+||||||++|
T Consensus        84 ~~~~~lv~e~~~~~   97 (289)
T 4fvq_A           84 GDENILVQEFVKFG   97 (289)
T ss_dssp             TTCCEEEEECCTTC
T ss_pred             CCCCEEEEECCCCC
Confidence            99999999999975

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.08  E-value=1.9e-10  Score=116.88  Aligned_cols=84  Identities=31%  Similarity=0.440  Sum_probs=68.7

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeC-----ceeeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceeeEEEe
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYGVCSK  493 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-----~~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g~~~~  493 (513)
                      +++..++|++.+.||+|+||.||+|.+.+     ....+++|....  .   ...+.+|+.+|++++|||||++++++..
T Consensus        66 ~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~  145 (367)
T 3l9p_A           66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ  145 (367)
T ss_dssp             CBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             hhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence            46777899999999999999999999643     334455553221  1   2368899999999999999999999999


Q ss_pred             CCeeEEEEccCCCC
Q psy17476        494 HRPIYIVTDTSSFR  507 (513)
Q Consensus       494 ~~~~~lV~E~~~~G  507 (513)
                      ....+||||||++|
T Consensus       146 ~~~~~lv~e~~~~g  159 (367)
T 3l9p_A          146 SLPRFILLELMAGG  159 (367)
T ss_dssp             SSSCEEEEECCTTE
T ss_pred             CCCCEEEEEeCCCC
Confidence            99999999999874

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.08  E-value=2.5e-10  Score=113.71  Aligned_cols=81  Identities=19%  Similarity=0.288  Sum_probs=69.9

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      ..++|++.+.||+|+||.||+++.+.++..+++|...       ...+.+.+|+.+|+.++|||||++++++.+...+|+
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l   83 (318)
T 1fot_A            4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM   83 (318)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred             ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence            3468999999999999999999998777777666322       234568899999999999999999999999999999


Q ss_pred             EEccCCCC
Q psy17476        500 VTDTSSFR  507 (513)
Q Consensus       500 V~E~~~~G  507 (513)
                      |||||+||
T Consensus        84 v~e~~~gg   91 (318)
T 1fot_A           84 IMDYIEGG   91 (318)
T ss_dssp             EECCCCSC
T ss_pred             EEeCCCCC
Confidence            99999985

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.08  E-value=2.8e-10  Score=111.08  Aligned_cols=79  Identities=25%  Similarity=0.382  Sum_probs=67.8

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeec-----CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE-----GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~-----~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      +.|.+.+.||+|+||.||++....+...+++|.     .....+.+.+|+++|++++||||+++++++.+....++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            578999999999999999999877655555542     223457899999999999999999999999999999999999


Q ss_pred             CCCC
Q psy17476        504 SSFR  507 (513)
Q Consensus       504 ~~~G  507 (513)
                      |++|
T Consensus       102 ~~~~  105 (285)
T 3is5_A          102 CEGG  105 (285)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            9985

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.08  E-value=8.6e-11  Score=116.75  Aligned_cols=82  Identities=26%  Similarity=0.378  Sum_probs=56.1

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCC-----CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-----MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-----~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      .++|++.+.||+|+||.||+|..+.++..+++|...     ...+.+.+|+.+|++++|||||++++++..++.++||||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            357889999999999999999988766666555321     123578999999999999999999999999999999999


Q ss_pred             cCCCCcc
Q psy17476        503 TSSFRLG  509 (513)
Q Consensus       503 ~~~~Gl~  509 (513)
                      ||+++|.
T Consensus        84 ~~~~~L~   90 (317)
T 2pmi_A           84 FMDNDLK   90 (317)
T ss_dssp             CCCCBHH
T ss_pred             ecCCCHH
Confidence            9998764

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.08  E-value=3.9e-12  Score=136.00  Aligned_cols=44  Identities=14%  Similarity=0.202  Sum_probs=38.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPS   55 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~   55 (513)
                      +++|+|.+++++           +..++.|++.||+|||+++||||||||+|||+
T Consensus       421 ~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl  464 (540)
T 3en9_A          421 INGKLAKDVIED-----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF  464 (540)
T ss_dssp             CCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEE
T ss_pred             CCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEE
Confidence            468999999876           45799999999999999999999999999443

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.08  E-value=1.8e-10  Score=114.88  Aligned_cols=79  Identities=23%  Similarity=0.328  Sum_probs=66.7

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC-----CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-----SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-----~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      ++|++.+.||+|+||.||+|....++..+++|....     ..+.+.+|+.+++.++|||||++++++.+++..||||||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            589999999999999999999987666666653211     124688999999999999999999999999999999999


Q ss_pred             CCCC
Q psy17476        504 SSFR  507 (513)
Q Consensus       504 ~~~G  507 (513)
                      |++|
T Consensus        87 ~~~~   90 (323)
T 3tki_A           87 CSGG   90 (323)
T ss_dssp             CTTE
T ss_pred             CCCC
Confidence            9885

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=99.07  E-value=1.7e-12  Score=126.29  Aligned_cols=94  Identities=32%  Similarity=0.579  Sum_probs=68.5

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      .+|+++.++|..|+.+|. ..++|+||||.|..++.|+||++.                                     
T Consensus       194 ~~WyhG~IsR~eAE~lL~-~~~~GtFLVR~Ss~~g~y~LSv~~-------------------------------------  235 (302)
T 2y3a_B          194 RTWYVGKINRTQAEEMLS-GKRDGTFLIRESSQRGCYACSVVV-------------------------------------  235 (302)
T ss_dssp             TTTBCCSCCHHHHHHHHT-TSCTTBEEBCCCSSTTCEEEEEEC-------------------------------------
T ss_pred             CCccCCCCCHHHHHHHhc-CCCCCcEEEEeccCCCceEEEEEe-------------------------------------
Confidence            569999999999999996 468999999999558889999765                                     


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEe-cCcccCChhhhhhcccccC-----CCCccccCcCC
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLS-EKHCCHSIPEVVNYHRHNS-----GGLASRLKTSP  408 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~-~~~~F~sl~eLi~~~~~~~-----~~~~~~~~~~~  408 (513)
                                              .+.++|++|....+| |++. ....|.++.+||.||...+     +++...+. .|
T Consensus       236 ------------------------~~~V~H~rI~~~~~g-~~~~~~~~~F~SL~eLV~~Y~~~~L~~~~~gl~~~L~-~P  289 (302)
T 2y3a_B          236 ------------------------DGDTKHCVIYRTATG-FGFAEPYNLYGSLKELVLHYQHASLVQHNDALTVTLA-HP  289 (302)
T ss_dssp             ------------------------SSSEEEEEEEEETTE-EESBTTBCCCSSHHHHHHTTSSSCSTTTCSSCCCCCS-BC
T ss_pred             ------------------------CCeeEEEEEEECCCc-eEEeCCCCCCCCHHHHHHHHHhCCccccCCCCceeeC-Cc
Confidence                                    245666666655444 4333 3468999999999998753     44555553 34


Q ss_pred             CCCC
Q psy17476        409 CDRP  412 (513)
Q Consensus       409 ~~~~  412 (513)
                      ++.+
T Consensus       290 v~~~  293 (302)
T 2y3a_B          290 VRAP  293 (302)
T ss_dssp             SCCC
T ss_pred             cCCC
Confidence            4443

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.07  E-value=1.9e-10  Score=115.30  Aligned_cols=80  Identities=23%  Similarity=0.343  Sum_probs=68.8

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecC---------CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG---------TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIY  498 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~---------~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  498 (513)
                      ..+|.+.+.||+|+||.||+|....+...+++|..         ....+.+.+|+++|++++|||||++++++.+.+..+
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  104 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC  104 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence            46799999999999999999999877766666632         122357899999999999999999999999999999


Q ss_pred             EEEccCCCC
Q psy17476        499 IVTDTSSFR  507 (513)
Q Consensus       499 lV~E~~~~G  507 (513)
                      ||||||+||
T Consensus       105 lv~e~~~gg  113 (345)
T 3hko_A          105 LVMELCHGG  113 (345)
T ss_dssp             EEEECCCSC
T ss_pred             EEEeCCCCC
Confidence            999999886

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.07  E-value=1.4e-10  Score=116.93  Aligned_cols=88  Identities=27%  Similarity=0.509  Sum_probs=71.2

Q ss_pred             CCCccccCCcCceeEeEecccccceEEEEEEeC-----ceeeEEeecCCC--C---HHHHHHHHHHHhcC-CCCceecee
Q psy17476        420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVAMMKEGTM--S---EDDFIEEAKVMTRL-QHQNLVQLY  488 (513)
Q Consensus       420 ~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-----~~~v~~~k~~~~--~---~~~f~~E~~il~~l-~HpNIV~l~  488 (513)
                      ....|+++.++|.+.+.||+|+||.||+|.+.+     +...+++|....  .   .+.|.+|+++|+++ +|||||+++
T Consensus        13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~   92 (359)
T 3vhe_A           13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   92 (359)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence            345789999999999999999999999998543     345555553322  2   24689999999999 899999999


Q ss_pred             eEEEeCC-eeEEEEccCCCC
Q psy17476        489 GVCSKHR-PIYIVTDTSSFR  507 (513)
Q Consensus       489 g~~~~~~-~~~lV~E~~~~G  507 (513)
                      ++|.+.+ .+++|||||++|
T Consensus        93 ~~~~~~~~~~~iv~e~~~~g  112 (359)
T 3vhe_A           93 GACTKPGGPLMVIVEFCKFG  112 (359)
T ss_dssp             EEECSTTSCCEEEEECCTTE
T ss_pred             eeeecCCCceEEEEEecCCC
Confidence            9998754 599999999985

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens}

Probab=99.07  E-value=4.7e-10  Score=95.56  Aligned_cols=90  Identities=27%  Similarity=0.533  Sum_probs=69.3

Q ss_pred             CCcCCCCCCHHHHHHHHcCCC-CCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQED-KEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~-~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ..|+++.++|.+|+++|...+ .+|+||||++++ .+.|+||++.                                   
T Consensus        26 ~~WyhG~isR~eAe~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~-----------------------------------   70 (126)
T 2aug_A           26 QPWFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSH-----------------------------------   70 (126)
T ss_dssp             STTEETTCCHHHHHHHHHTTTCCTTEEEEEECSSSSCCEEEEEEE-----------------------------------
T ss_pred             CCcccCCCCHHHHHHHHhccCCCCCEEEEeecCCCCCCEEEEEEc-----------------------------------
Confidence            459999999999999998744 699999999976 7889999765                                   


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEc-CCccEEE--e-cCcccCChhhhhhcccccCCCCccccC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQN-SRGEFFL--S-EKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~-~~~~~~i--~-~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                                .+.++|++|... .+|.|++  . ....|.++.+||++|.....++..++.
T Consensus        71 --------------------------~~~v~H~~I~~~~~~G~~~~~l~~~~~~F~SL~eLV~~y~~~~~~l~~~L~  121 (126)
T 2aug_A           71 --------------------------GQKIKHFQIIPVEDDGEMFHTLDDGHTRFTDLIQLVEFYQLNKGVLPCKLK  121 (126)
T ss_dssp             --------------------------TTEEEEEEEEEEEETTEEEEESSTTSSCBSSHHHHHHHHTTCCTTSSSCCC
T ss_pred             --------------------------CCeEEEEEEEEECCCCeEEEEeCCCCCccCCHHHHHHHHhhCCCCCceecC
Confidence                                      245566666553 2455544  2 257899999999999998887776664

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.07  E-value=1.8e-10  Score=116.76  Aligned_cols=80  Identities=29%  Similarity=0.296  Sum_probs=67.9

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecC---CCC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG---TMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~---~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      .++|.+.+.||+|+||.||+|..+.++..+++|..   ...   .+.+.+|+.+|++++|||||++++++.+....||||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            35799999999999999999999876666665532   222   246889999999999999999999999999999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      |||+||
T Consensus       108 e~~~gg  113 (362)
T 2bdw_A          108 DLVTGG  113 (362)
T ss_dssp             CCCCSC
T ss_pred             ecCCCC
Confidence            999986

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A*

Probab=99.06  E-value=4.1e-10  Score=91.98  Aligned_cols=81  Identities=27%  Similarity=0.586  Sum_probs=64.9

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|..|+++|... ++|+||||.|++ ++.|++|++.                                    
T Consensus         9 ~~Wyhg~isR~~Ae~lL~~~-~~G~FLVR~S~~~~g~~~LSv~~------------------------------------   51 (100)
T 1r1p_A            9 PEWFHEGLSRHQAENLLMGK-DIGFFIIRASQSSPGDFSISVRH------------------------------------   51 (100)
T ss_dssp             TTTSCTTCCHHHHHHHHHTS-CTTBEEEEECSSSTTCEEEEEEC------------------------------------
T ss_pred             CCccccCCCHHHHHHHhcCC-CCCEEEEEecCCCCCCEEEEEEE------------------------------------
Confidence            46999999999999999864 799999999975 7889888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSG  398 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~  398 (513)
                                               .+.++|++|....+|.|++.+ ..|.++.+||++|...+.
T Consensus        52 -------------------------~~~v~H~~I~~~~~g~~~l~~-~~F~sl~~LV~~y~~~~l   90 (100)
T 1r1p_A           52 -------------------------EDDVQHFKVMRDTKGNYFLWT-EKFPSLNKLVDYYRTTSI   90 (100)
T ss_dssp             -------------------------SSSEEEEECEECTTCCEESSS-CEESSHHHHHHHHTTSCS
T ss_pred             -------------------------CCEEEEEEEEEcCCCCEEEeC-CEeCCHHHHHHHHHhCCC
Confidence                                     245666666665566666654 689999999999998754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.06  E-value=2.2e-10  Score=114.93  Aligned_cols=86  Identities=31%  Similarity=0.517  Sum_probs=71.2

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeC-----ceeeEEeecCCC-----CHHHHHHHHHHHhcC-CCCceeceeeE
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVAMMKEGTM-----SEDDFIEEAKVMTRL-QHQNLVQLYGV  490 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-----~~~v~~~k~~~~-----~~~~f~~E~~il~~l-~HpNIV~l~g~  490 (513)
                      ..|+++.++|.+.+.||+|+||.||+|.+..     ....+++|....     ..+.+.+|+.+|+++ +||||++++++
T Consensus        38 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  117 (344)
T 1rjb_A           38 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGA  117 (344)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cCcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            4689999999999999999999999999732     333455553221     235789999999999 99999999999


Q ss_pred             EEeCCeeEEEEccCCCC
Q psy17476        491 CSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       491 ~~~~~~~~lV~E~~~~G  507 (513)
                      +...+.++||||||++|
T Consensus       118 ~~~~~~~~lv~e~~~~g  134 (344)
T 1rjb_A          118 CTLSGPIYLIFEYCCYG  134 (344)
T ss_dssp             ECSSSSCEEEEECCTTC
T ss_pred             EeeCCccEEEEecCCCC
Confidence            99999999999999874

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.06  E-value=3.5e-10  Score=95.31  Aligned_cols=81  Identities=23%  Similarity=0.490  Sum_probs=66.2

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      ..|+++.++|.+|+++|.. .++|.||||.+++ .+.|+||++.                                    
T Consensus        16 ~~WyhG~isR~~Ae~lL~~-~~~G~FLVR~S~~~~g~y~LSv~~------------------------------------   58 (118)
T 2dlz_A           16 YPWFAGNMERQQTDNLLKS-HASGTYLIRERPAEAERFAISIKF------------------------------------   58 (118)
T ss_dssp             STTEEESCCHHHHHHHHHH-SCTTBEEEECCSCSSCCEEEEEEC------------------------------------
T ss_pred             CCceecCCCHHHHHHHhcC-CCCCEEEEEeCCCCCCCEEEEEEE------------------------------------
Confidence            4699999999999999976 4889999999975 7888888764                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSG  398 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~  398 (513)
                                               .+.++|++|... ++.|++.+...|.++.+||+||.....
T Consensus        59 -------------------------~~~v~H~~I~~~-~g~~~l~~~~~F~sl~~LV~~y~~~~l   97 (118)
T 2dlz_A           59 -------------------------NDEVKHIKVVEK-DNWIHITEAKKFDSLLELVEYYQCHSL   97 (118)
T ss_dssp             -------------------------SSSEEEEEEEEE-TTEEESTTSCCBSSHHHHHHHHTTSCT
T ss_pred             -------------------------CCcEEEEEEEEc-CCEEEEeCCcccCCHHHHHHHHhhCcc
Confidence                                     245667777663 566777767899999999999998754

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.06  E-value=2e-10  Score=113.84  Aligned_cols=82  Identities=26%  Similarity=0.300  Sum_probs=66.8

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCC--CC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT--MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~--~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      -.++|++.+.||+|+||.||+|.......+++++...  ..   .+.+.+|+++|++++|||||++++++.++..++|||
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            3468999999999999999999986644444333211  11   246889999999999999999999999999999999


Q ss_pred             ccCCCCc
Q psy17476        502 DTSSFRL  508 (513)
Q Consensus       502 E~~~~Gl  508 (513)
                      |||+++|
T Consensus        99 e~~~~~l  105 (311)
T 3niz_A           99 EFMEKDL  105 (311)
T ss_dssp             ECCSEEH
T ss_pred             cCCCCCH
Confidence            9999877

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.06  E-value=3e-10  Score=116.30  Aligned_cols=79  Identities=27%  Similarity=0.304  Sum_probs=69.0

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC----HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccC
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS----EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS  504 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~----~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~  504 (513)
                      +.|++.+.||+|+||.||+|....++.++++|.....    ...+.+|+.+|++++|||||++++++.+...++||||||
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~  130 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  130 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence            5799999999999999999999877777776643322    346889999999999999999999999999999999999


Q ss_pred             CCC
Q psy17476        505 SFR  507 (513)
Q Consensus       505 ~~G  507 (513)
                      +||
T Consensus       131 ~gg  133 (387)
T 1kob_A          131 SGG  133 (387)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            986

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.06  E-value=2.1e-10  Score=112.18  Aligned_cols=81  Identities=25%  Similarity=0.365  Sum_probs=66.7

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC-----CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-----SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-----~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      ++|++.+.||+|+||.||+|.......+++++....     ..+.+.+|+++|++++|||||++++++...+.+++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            478999999999999999999854444544442211     125788999999999999999999999999999999999


Q ss_pred             CCCCcc
Q psy17476        504 SSFRLG  509 (513)
Q Consensus       504 ~~~Gl~  509 (513)
                      ++++|.
T Consensus        82 ~~~~l~   87 (288)
T 1ob3_A           82 LDQDLK   87 (288)
T ss_dssp             CSEEHH
T ss_pred             cCCCHH
Confidence            998763

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.05  E-value=2.5e-10  Score=113.86  Aligned_cols=86  Identities=29%  Similarity=0.547  Sum_probs=71.5

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeCcee-----eEEeecCCC--C---HHHHHHHHHHHhcC-CCCceeceeeE
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEGTM--S---EDDFIEEAKVMTRL-QHQNLVQLYGV  490 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~-----v~~~k~~~~--~---~~~f~~E~~il~~l-~HpNIV~l~g~  490 (513)
                      ..|++..++|.+.+.||+|+||.||+|.+.....     .+++|....  .   .+.+.+|+.+|+++ +|||||+++++
T Consensus        39 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  118 (333)
T 2i1m_A           39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGA  118 (333)
T ss_dssp             GGGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            4689999999999999999999999999865332     344443221  1   34689999999999 89999999999


Q ss_pred             EEeCCeeEEEEccCCCC
Q psy17476        491 CSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       491 ~~~~~~~~lV~E~~~~G  507 (513)
                      +...+.++||||||++|
T Consensus       119 ~~~~~~~~lv~e~~~~g  135 (333)
T 2i1m_A          119 CTHGGPVLVITEYCCYG  135 (333)
T ss_dssp             ECSSSSCEEEEECCTTE
T ss_pred             EecCCceEEEEecCCCC
Confidence            99999999999999884

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.05  E-value=2.3e-10  Score=112.93  Aligned_cols=87  Identities=26%  Similarity=0.467  Sum_probs=72.2

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEe-----CceeeEEeecCCC--C---HHHHHHHHHHHhcC-CCCceeceee
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWR-----GSIDVAMMKEGTM--S---EDDFIEEAKVMTRL-QHQNLVQLYG  489 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~-----~~~~v~~~k~~~~--~---~~~f~~E~~il~~l-~HpNIV~l~g  489 (513)
                      ...|+++.++|.+.+.||+|+||.||+|.+.     .....+++|....  .   .+.+.+|+.+|+++ +||||+++++
T Consensus        15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~   94 (313)
T 1t46_A           15 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG   94 (313)
T ss_dssp             CGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEE
Confidence            4578999999999999999999999999863     2344455553222  1   35689999999999 9999999999


Q ss_pred             EEEeCCeeEEEEccCCCC
Q psy17476        490 VCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       490 ~~~~~~~~~lV~E~~~~G  507 (513)
                      ++...+..++|||||++|
T Consensus        95 ~~~~~~~~~lv~e~~~~~  112 (313)
T 1t46_A           95 ACTIGGPTLVITEYCCYG  112 (313)
T ss_dssp             EECSSSSCEEEEECCTTE
T ss_pred             EEecCCCcEEEEecCCCC
Confidence            999999999999999884

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.05  E-value=3.7e-10  Score=112.71  Aligned_cols=79  Identities=24%  Similarity=0.283  Sum_probs=67.3

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecC---C-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG---T-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIY  498 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~---~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  498 (513)
                      +.|.+.+.||+|+||.||++....++..+++|..   .       ...+.+.+|+.+|++++|||||++++++.....++
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            5689999999999999999999876665555521   1       13467999999999999999999999999999999


Q ss_pred             EEEccCCCC
Q psy17476        499 IVTDTSSFR  507 (513)
Q Consensus       499 lV~E~~~~G  507 (513)
                      +|||||++|
T Consensus        91 lv~e~~~~~   99 (326)
T 2y0a_A           91 LILELVAGG   99 (326)
T ss_dssp             EEEECCCSC
T ss_pred             EEEEcCCCC
Confidence            999999875

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.05  E-value=4.2e-10  Score=109.10  Aligned_cols=79  Identities=24%  Similarity=0.375  Sum_probs=67.7

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeec----CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccC
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE----GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS  504 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~----~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~  504 (513)
                      ..|++.+.||+|+||.||+|....+...+++|.    .....+.+.+|+++|++++||||+++++++.+....++|||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            468999999999999999999987665444442    2334578999999999999999999999999999999999999


Q ss_pred             CCC
Q psy17476        505 SFR  507 (513)
Q Consensus       505 ~~G  507 (513)
                      ++|
T Consensus        89 ~~~   91 (277)
T 3f3z_A           89 TGG   91 (277)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            885

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.05  E-value=1.2e-10  Score=117.27  Aligned_cols=80  Identities=24%  Similarity=0.319  Sum_probs=68.6

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCCCHHHHHHHHHHHhcC-CCCceeceeeEEEeCCeeEEEEccCCC
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTSSF  506 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV~E~~~~  506 (513)
                      .++|++.+.||+|+||.||+|..+.++..+++|........+.+|+++|.++ +|||||++++++.+...+|||||||+|
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~g  100 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG  100 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCC
Confidence            3579999999999999999999988777777775444444566899999888 899999999999999999999999998


Q ss_pred             C
Q psy17476        507 R  507 (513)
Q Consensus       507 G  507 (513)
                      |
T Consensus       101 g  101 (342)
T 2qr7_A          101 G  101 (342)
T ss_dssp             C
T ss_pred             C
Confidence            6

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A

Probab=99.04  E-value=3.8e-10  Score=94.24  Aligned_cols=80  Identities=34%  Similarity=0.554  Sum_probs=61.6

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      ..|+++.++|.+|+++|.. .++|+||||.|...+.|+||++.                                     
T Consensus        10 ~~Wyhg~isR~~Ae~lL~~-~~~G~FLVR~S~~~g~y~LSv~~-------------------------------------   51 (112)
T 1h9o_A           10 KTWNVGSSNRNKAENLLRG-KRDGTFLVRESSKQGCYACSVVV-------------------------------------   51 (112)
T ss_dssp             GGTBCCSCCHHHHHHHHTT-CCTTEEEEEECSSTTCEEEEEEE-------------------------------------
T ss_pred             CCcccCCCCHHHHHHHhcC-CCCceEEEeecCCCCCEEEEEEE-------------------------------------
Confidence            4699999999999999974 68999999999557888888765                                     


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhccccc
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHN  396 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~  396 (513)
                                              .+.++|++|....++.++......|.++.+||+||...
T Consensus        52 ------------------------~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~~   89 (112)
T 1h9o_A           52 ------------------------DGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHYQHT   89 (112)
T ss_dssp             ------------------------TTEEEEEEEEEETTEEESSTTCCCBSSHHHHHHHHHHS
T ss_pred             ------------------------CCEEEEEEEEEcCCceEEeCCCCCcCCHHHHHHHHhhC
Confidence                                    24566666665544423223356899999999999874

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.04  E-value=2.8e-10  Score=114.25  Aligned_cols=80  Identities=21%  Similarity=0.296  Sum_probs=68.6

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      ..|.+.+.||+|+||.||+|.+..++..+++|...       .....+.+|+.+|+.++|||||++++++.....++|||
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            57999999999999999999997776666666322       12356889999999999999999999999999999999


Q ss_pred             ccCCCCc
Q psy17476        502 DTSSFRL  508 (513)
Q Consensus       502 E~~~~Gl  508 (513)
                      ||+.|+|
T Consensus        89 E~~~g~l   95 (336)
T 3h4j_B           89 EYAGGEL   95 (336)
T ss_dssp             CCCCEEH
T ss_pred             ECCCCcH
Confidence            9997766

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.04  E-value=3.6e-10  Score=112.98  Aligned_cols=87  Identities=28%  Similarity=0.523  Sum_probs=71.1

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeC-------ceeeEEeecCCC--C---HHHHHHHHHHHhcC-CCCceece
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG-------SIDVAMMKEGTM--S---EDDFIEEAKVMTRL-QHQNLVQL  487 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-------~~~v~~~k~~~~--~---~~~f~~E~~il~~l-~HpNIV~l  487 (513)
                      ...|++..++|.+.+.||+|+||.||+|.+..       ....+++|....  .   .+.+.+|+.+|+++ +||||+++
T Consensus        27 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~  106 (334)
T 2pvf_A           27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL  106 (334)
T ss_dssp             CTTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeE
Confidence            35688999999999999999999999999752       233445553322  2   24688999999999 99999999


Q ss_pred             eeEEEeCCeeEEEEccCCCC
Q psy17476        488 YGVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       488 ~g~~~~~~~~~lV~E~~~~G  507 (513)
                      ++++...+.++||||||++|
T Consensus       107 ~~~~~~~~~~~lv~e~~~~~  126 (334)
T 2pvf_A          107 LGACTQDGPLYVIVEYASKG  126 (334)
T ss_dssp             EEEECSSSCCEEEEECCTTC
T ss_pred             EEEEccCCceEEEEECCCCC
Confidence            99999999999999999885

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.04  E-value=3.3e-10  Score=115.82  Aligned_cols=84  Identities=15%  Similarity=0.195  Sum_probs=70.4

Q ss_pred             ccCCcCceeEeEeccc--ccceEEEEEEeCceeeEEeecCC---CC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCe
Q psy17476        425 EIDPAELMLLEELGSG--QFGVVRRGKWRGSIDVAMMKEGT---MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G--~fG~V~~g~~~~~~~v~~~k~~~---~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  496 (513)
                      .....+|++.+.||+|  +||.||+++...++..+++|...   ..   .+.+.+|+.+|++++|||||++++++.+.+.
T Consensus        21 ~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  100 (389)
T 3gni_B           21 LPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE  100 (389)
T ss_dssp             CCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             cCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence            3456789999999999  99999999998766666666322   11   2457889999999999999999999999999


Q ss_pred             eEEEEccCCCCc
Q psy17476        497 IYIVTDTSSFRL  508 (513)
Q Consensus       497 ~~lV~E~~~~Gl  508 (513)
                      +|||||||++|.
T Consensus       101 ~~lv~e~~~~~~  112 (389)
T 3gni_B          101 LWVVTSFMAYGS  112 (389)
T ss_dssp             EEEEEECCTTCB
T ss_pred             EEEEEEccCCCC
Confidence            999999999864

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.04  E-value=3.8e-10  Score=115.16  Aligned_cols=87  Identities=28%  Similarity=0.553  Sum_probs=71.4

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCc-------eeeEEeecCC--CC---HHHHHHHHHHHhcC-CCCceece
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-------IDVAMMKEGT--MS---EDDFIEEAKVMTRL-QHQNLVQL  487 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~-------~~v~~~k~~~--~~---~~~f~~E~~il~~l-~HpNIV~l  487 (513)
                      ...|++..++|.+.+.||+|+||.||+|.+...       ...+++|...  ..   .+.+.+|+++|+++ +|||||++
T Consensus        61 ~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~  140 (382)
T 3tt0_A           61 DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL  140 (382)
T ss_dssp             CTTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CcccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhh
Confidence            457899999999999999999999999997532       2334444322  12   24688999999999 99999999


Q ss_pred             eeEEEeCCeeEEEEccCCCC
Q psy17476        488 YGVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       488 ~g~~~~~~~~~lV~E~~~~G  507 (513)
                      +++|...+.++||||||++|
T Consensus       141 ~~~~~~~~~~~lv~e~~~~g  160 (382)
T 3tt0_A          141 LGACTQDGPLYVIVEYASKG  160 (382)
T ss_dssp             EEEECSSSSCEEEEECCTTC
T ss_pred             eeeeccCCceEEEEEecCCC
Confidence            99999999999999999885

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.04  E-value=2.2e-10  Score=114.48  Aligned_cols=83  Identities=18%  Similarity=0.292  Sum_probs=69.2

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC------HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      ..++|++.+.||+|+||.||+|....++..+++|.....      .+.+.+|+.+|++++|||||++++++..+..++||
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            446899999999999999999998877676666643221      23578999999999999999999999999999999


Q ss_pred             EccCCCCcc
Q psy17476        501 TDTSSFRLG  509 (513)
Q Consensus       501 ~E~~~~Gl~  509 (513)
                      ||||++.|.
T Consensus       112 ~e~~~~~L~  120 (329)
T 3gbz_A          112 FEYAENDLK  120 (329)
T ss_dssp             EECCSEEHH
T ss_pred             EecCCCCHH
Confidence            999998764

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.04  E-value=5.2e-10  Score=108.86  Aligned_cols=86  Identities=27%  Similarity=0.516  Sum_probs=68.5

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCc---eeeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceeeEEE
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS---IDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYGVCS  492 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~---~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g~~~  492 (513)
                      ...|++..++|++.+.||+|+||.||+|.+...   ...+++|....  .   .+.|.+|+.+|++++|||||++++++.
T Consensus         7 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   86 (281)
T 1mp8_A            7 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT   86 (281)
T ss_dssp             --CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             ccceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc
Confidence            346788999999999999999999999998643   23345553222  1   246899999999999999999999985


Q ss_pred             eCCeeEEEEccCCCC
Q psy17476        493 KHRPIYIVTDTSSFR  507 (513)
Q Consensus       493 ~~~~~~lV~E~~~~G  507 (513)
                       ++..++||||+++|
T Consensus        87 -~~~~~lv~e~~~~~  100 (281)
T 1mp8_A           87 -ENPVWIIMELCTLG  100 (281)
T ss_dssp             -SSSCEEEEECCTTE
T ss_pred             -cCccEEEEecCCCC
Confidence             56789999999985

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.04  E-value=3.4e-10  Score=114.36  Aligned_cols=83  Identities=23%  Similarity=0.262  Sum_probs=70.9

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      ++..++|++.+.||+|+||.||++.+..++..+++|....  .   .+.+.+|+.+|++++|||||++++++..++..+|
T Consensus        29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  108 (360)
T 3eqc_A           29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI  108 (360)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred             ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEE
Confidence            4556789999999999999999999987767666664322  1   2468999999999999999999999999999999


Q ss_pred             EEccCCCC
Q psy17476        500 VTDTSSFR  507 (513)
Q Consensus       500 V~E~~~~G  507 (513)
                      |||||++|
T Consensus       109 v~e~~~~~  116 (360)
T 3eqc_A          109 CMEHMDGG  116 (360)
T ss_dssp             EECCCTTC
T ss_pred             EEECCCCC
Confidence            99999884

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.04  E-value=2.2e-10  Score=115.51  Aligned_cols=81  Identities=22%  Similarity=0.328  Sum_probs=67.8

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC---CC----HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT---MS----EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~---~~----~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      ..|...+.||+|+||.||+|....++..+++|...   ..    .+.|.+|+++|++++|||||++++++..++..+|||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            45888999999999999999987666666555321   11    146889999999999999999999999999999999


Q ss_pred             ccCCCCcc
Q psy17476        502 DTSSFRLG  509 (513)
Q Consensus       502 E~~~~Gl~  509 (513)
                      |||.|+|.
T Consensus       134 e~~~g~l~  141 (348)
T 1u5q_A          134 EYCLGSAS  141 (348)
T ss_dssp             ECCSEEHH
T ss_pred             ecCCCCHH
Confidence            99998763

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.04  E-value=3.9e-10  Score=119.55  Aligned_cols=80  Identities=21%  Similarity=0.333  Sum_probs=66.1

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCC-----------------CCHHHHHHHHHHHhcCCCCceeceeeE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-----------------MSEDDFIEEAKVMTRLQHQNLVQLYGV  490 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-----------------~~~~~f~~E~~il~~l~HpNIV~l~g~  490 (513)
                      .+.|.+.+.||+|+||.||+|..+.+...+++|...                 ...+.+.+|+.+|++++|||||+++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            467999999999999999999998776655555211                 123568999999999999999999999


Q ss_pred             EEeCCeeEEEEccCCCC
Q psy17476        491 CSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       491 ~~~~~~~~lV~E~~~~G  507 (513)
                      +.+...+|||||||+||
T Consensus       115 ~~~~~~~~lv~e~~~gg  131 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGG  131 (504)
T ss_dssp             EECSSEEEEEEECCTTC
T ss_pred             EEcCCEEEEEEecCCCC
Confidence            99999999999999986

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.04  E-value=3.6e-10  Score=114.01  Aligned_cols=81  Identities=22%  Similarity=0.237  Sum_probs=63.2

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCC--CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccC
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT--MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS  504 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~--~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~  504 (513)
                      ..+.|.+.+.||+|+||.||+|....+...+++|...  ...+.+.+|+.+|++++|||||++++++.....++||||||
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  130 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV  130 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence            3467999999999999999999998776666555322  23456889999999999999999999999999999999999


Q ss_pred             CCC
Q psy17476        505 SFR  507 (513)
Q Consensus       505 ~~G  507 (513)
                      ++|
T Consensus       131 ~~~  133 (349)
T 2w4o_A          131 TGG  133 (349)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            975

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.04  E-value=1.8e-10  Score=118.84  Aligned_cols=85  Identities=20%  Similarity=0.176  Sum_probs=72.3

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC-------HHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      .+.+..++|++.+.||+|+||+||+++.+.++..+++|.....       .+.+.+|+.+|.+++|||||++++++.+.+
T Consensus        55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~  134 (412)
T 2vd5_A           55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN  134 (412)
T ss_dssp             HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred             hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence            3456778999999999999999999999877777777643221       124889999999999999999999999999


Q ss_pred             eeEEEEccCCCC
Q psy17476        496 PIYIVTDTSSFR  507 (513)
Q Consensus       496 ~~~lV~E~~~~G  507 (513)
                      .+|||||||+||
T Consensus       135 ~~~lVmE~~~gg  146 (412)
T 2vd5_A          135 YLYLVMEYYVGG  146 (412)
T ss_dssp             EEEEEECCCCSC
T ss_pred             EEEEEEcCCCCC
Confidence            999999999886

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.03  E-value=3.8e-10  Score=110.81  Aligned_cols=80  Identities=19%  Similarity=0.169  Sum_probs=67.6

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecC----CCC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG----TMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~----~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      .++|++.+.||+|+||.||++....+...+++|..    ...   .+.|.+|+.++++++|||||++++++...+.+|+|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            46799999999999999999998776665655532    112   24688999999999999999999999999999999


Q ss_pred             EccCCCC
Q psy17476        501 TDTSSFR  507 (513)
Q Consensus       501 ~E~~~~G  507 (513)
                      ||||+||
T Consensus        90 ~e~~~g~   96 (294)
T 4eqm_A           90 MEYIEGP   96 (294)
T ss_dssp             EECCCSC
T ss_pred             EeCCCCC
Confidence            9999985

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.03  E-value=5.9e-10  Score=113.52  Aligned_cols=76  Identities=26%  Similarity=0.311  Sum_probs=59.1

Q ss_pred             eeEeEecccccceEEEEEEeCceeeEEeecCCC----CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccCCCC
Q psy17476        432 MLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM----SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       432 ~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~----~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~~~G  507 (513)
                      ...+.||+|+||.||+|....++..+++|....    ..+.|.+|+++|++++|||||++++++...+.++||||||++|
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            335689999999999999887666666664322    2357899999999999999999999999999999999999985

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.03  E-value=5.1e-10  Score=113.00  Aligned_cols=81  Identities=20%  Similarity=0.218  Sum_probs=69.8

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      ..++|++.+.||+|+||.||+++.+.++..+++|...       ...+.+.+|+++|++++|||||++++++.+...+||
T Consensus        39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  118 (350)
T 1rdq_E           39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            3468999999999999999999998776666666322       234578899999999999999999999999999999


Q ss_pred             EEccCCCC
Q psy17476        500 VTDTSSFR  507 (513)
Q Consensus       500 V~E~~~~G  507 (513)
                      |||||+||
T Consensus       119 v~e~~~gg  126 (350)
T 1rdq_E          119 VMEYVAGG  126 (350)
T ss_dssp             EEECCTTC
T ss_pred             EEcCCCCC
Confidence            99999875

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.03  E-value=2.5e-10  Score=118.98  Aligned_cols=80  Identities=29%  Similarity=0.307  Sum_probs=65.7

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCC---CC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT---MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~---~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      .++|++.+.||+|+||.||+|....++..+++|...   ..   .+.+.+|+.+|++++|||||++++++.+.+..||||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            357899999999999999999988766666555322   11   246889999999999999999999999999999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      |||+||
T Consensus        90 E~~~gg   95 (444)
T 3soa_A           90 DLVTGG   95 (444)
T ss_dssp             CCCBCC
T ss_pred             EeCCCC
Confidence            999986

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.03  E-value=5.3e-10  Score=110.97  Aligned_cols=81  Identities=21%  Similarity=0.301  Sum_probs=68.3

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-----CCHHHHHHHHHHHhcCCCCceeceeeEEEeCC--eeEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-----MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHR--PIYI  499 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-----~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~--~~~l  499 (513)
                      ....|++.+.||+|+||.||+|.+..++..+++|...     ...+.+.+|+++|++++|||||++++++....  .++|
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   86 (319)
T 4euu_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL   86 (319)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred             CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence            4567999999999999999999998766666666322     23467889999999999999999999998765  7899


Q ss_pred             EEccCCCC
Q psy17476        500 VTDTSSFR  507 (513)
Q Consensus       500 V~E~~~~G  507 (513)
                      |||||++|
T Consensus        87 v~e~~~~~   94 (319)
T 4euu_A           87 IMEFCPCG   94 (319)
T ss_dssp             EEECCTTC
T ss_pred             EEeCCCCC
Confidence            99999975

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.03  E-value=3.7e-10  Score=112.73  Aligned_cols=84  Identities=20%  Similarity=0.226  Sum_probs=64.4

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEe---CceeeEEeecCCC--------CHHHHHHHHHHHhcCCCCceeceeeEEE
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWR---GSIDVAMMKEGTM--------SEDDFIEEAKVMTRLQHQNLVQLYGVCS  492 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~---~~~~v~~~k~~~~--------~~~~f~~E~~il~~l~HpNIV~l~g~~~  492 (513)
                      ..+..++|++.+.||+|+||.||+++..   .++..+++|....        ....+.+|+.+|++++|||||++++++.
T Consensus        12 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   91 (327)
T 3a62_A           12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ   91 (327)
T ss_dssp             -CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE
T ss_pred             CCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE
Confidence            3456789999999999999999999874   3445555553221        2245788999999999999999999999


Q ss_pred             eCCeeEEEEccCCCC
Q psy17476        493 KHRPIYIVTDTSSFR  507 (513)
Q Consensus       493 ~~~~~~lV~E~~~~G  507 (513)
                      ..+.+|||||||+||
T Consensus        92 ~~~~~~lv~e~~~~~  106 (327)
T 3a62_A           92 TGGKLYLILEYLSGG  106 (327)
T ss_dssp             CSSCEEEEEECCTTE
T ss_pred             cCCEEEEEEeCCCCC
Confidence            999999999999975

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus}

Probab=99.03  E-value=6.1e-10  Score=94.71  Aligned_cols=88  Identities=27%  Similarity=0.495  Sum_probs=68.8

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      ..|+++.++|.+|+++|.....+|.||||+++..+.|+||++.                                     
T Consensus        19 ~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~g~y~LSv~~-------------------------------------   61 (124)
T 2eob_A           19 KPWYYDRLSRGEAEDMLMRIPRDGAFLIRKREGTDSYAITFRA-------------------------------------   61 (124)
T ss_dssp             STTEESSCCHHHHHHHHHHCCSSSEEEEECCTTSSCEEEEEEE-------------------------------------
T ss_pred             CCCeecCCCHHHHHHHHhcCCCCCEEEEEecCCCCCEEEEEEe-------------------------------------
Confidence            4699999999999999987667899999999877889888765                                     


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCcccc
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRL  404 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~  404 (513)
                                              .+.++|++|..+ ++.|.+.....|.++.+||+||......+...+
T Consensus        62 ------------------------~~~v~H~~I~~~-~~~~~~~~~~~F~sl~~LV~~y~~~~~~~~~~L  106 (124)
T 2eob_A           62 ------------------------RGKVKHCRINRD-GRHFVLGTSAYFESLVELVSYYEKHALYRKMRL  106 (124)
T ss_dssp             ------------------------TTEEEEEEEEES-SSCEESSSSCCBSSHHHHHHHHTTSCSSSSCCS
T ss_pred             ------------------------CCeEEEEEEEEC-CCEEEECCCCcCCCHHHHHHHHhhCCCCCCcCC
Confidence                                    245667766653 445655555569999999999999876655444

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.03  E-value=5.7e-10  Score=109.55  Aligned_cols=82  Identities=22%  Similarity=0.319  Sum_probs=69.5

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCC----CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT----MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~----~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      ..+.|++.+.||+|+||.||+|.+..++..+++|...    ...+.+.+|+++|++++||||+++++++...+..++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            4567999999999999999999998766666666322    234679999999999999999999999999999999999


Q ss_pred             cCCCCc
Q psy17476        503 TSSFRL  508 (513)
Q Consensus       503 ~~~~Gl  508 (513)
                      ||++|.
T Consensus        97 ~~~~~~  102 (302)
T 2j7t_A           97 FCPGGA  102 (302)
T ss_dssp             CCTTEE
T ss_pred             eCCCCc
Confidence            999874

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.03  E-value=5.3e-10  Score=110.32  Aligned_cols=80  Identities=21%  Similarity=0.370  Sum_probs=67.6

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC---CC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT---MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~---~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      ++|++.+.||+|+||.||+|....++..+++|...   ..   .+.+.+|+++|++++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            47899999999999999999998766666555321   11   2458899999999999999999999999999999999


Q ss_pred             cCCCCc
Q psy17476        503 TSSFRL  508 (513)
Q Consensus       503 ~~~~Gl  508 (513)
                      ||++|+
T Consensus        83 ~~~~~~   88 (311)
T 4agu_A           83 YCDHTV   88 (311)
T ss_dssp             CCSEEH
T ss_pred             eCCCch
Confidence            999875

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus}

Probab=99.02  E-value=4.2e-10  Score=97.57  Aligned_cols=83  Identities=29%  Similarity=0.536  Sum_probs=65.7

Q ss_pred             CCcCCCCC-CHHHHHHHHcC-----CCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccC
Q psy17476        255 KAWYVGDM-SRQRAESILKQ-----EDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHS  327 (513)
Q Consensus       255 ~~w~~~~~-~R~~aeeLL~~-----~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~  327 (513)
                      ..|+++.+ +|..|+++|..     ...+|+||||++++ .+.|+||++.                              
T Consensus        22 ~~WyhG~i~sR~eAe~lL~~~c~~~g~~~G~FLVR~S~~~~g~y~LSv~~------------------------------   71 (138)
T 2dx0_A           22 EKWFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWR------------------------------   71 (138)
T ss_dssp             CTTBCTTCCCHHHHHHHHHHHHTTTTCCTTCEEEEECSSSTTCEEEEEEE------------------------------
T ss_pred             CCcccCCCCCHHHHHHHHHhhccccCCCCCEEEEEeCCCCCCCeEEEEEE------------------------------
Confidence            46999999 89999999985     36899999999976 7889888765                              


Q ss_pred             hhhhhccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCc---cEEEecCcccCChhhhhhcccccCC
Q psy17476        328 IPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRG---EFFLSEKHCCHSIPEVVNYHRHNSG  398 (513)
Q Consensus       328 ~~~~l~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~---~~~i~~~~~F~sl~eLi~~~~~~~~  398 (513)
                                                     .+.++|++|....++   .|++.+...|.++.+||+||.....
T Consensus        72 -------------------------------~~~v~H~~I~~~~~gg~~~~~l~~~~~F~sl~eLI~~y~~~~l  114 (138)
T 2dx0_A           72 -------------------------------SGRVQHCRIRSTMENGVMKYYLTDNLTFNSIYALIQHYREAHL  114 (138)
T ss_dssp             -------------------------------TTEEEEEEEEEEEETTEEEEESSTTSCBSSHHHHHHHTTTSCC
T ss_pred             -------------------------------CCeEEEEEEEEecCCCceEEEeCCCCcCCCHHHHHHHHhhCCC
Confidence                                           245566666554332   5777777899999999999998763

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.02  E-value=3.6e-10  Score=115.95  Aligned_cols=84  Identities=17%  Similarity=0.175  Sum_probs=69.5

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcC-CCCceeceeeEEEeCCe
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRL-QHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~  496 (513)
                      .+..++|++.+.||+|+||+||+++.+.+...+++|....       ..+.+.+|+.+|.++ +|||||++++++.+.+.
T Consensus        48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~  127 (396)
T 4dc2_A           48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR  127 (396)
T ss_dssp             -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence            4566789999999999999999999988777666663221       123588999999887 89999999999999999


Q ss_pred             eEEEEccCCCCc
Q psy17476        497 IYIVTDTSSFRL  508 (513)
Q Consensus       497 ~~lV~E~~~~Gl  508 (513)
                      +|||||||+||-
T Consensus       128 ~~lV~E~~~gg~  139 (396)
T 4dc2_A          128 LFFVIEYVNGGD  139 (396)
T ss_dssp             EEEEEECCTTCB
T ss_pred             EEEEEEcCCCCc
Confidence            999999999863

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C*

Probab=99.02  E-value=4.4e-10  Score=93.67  Aligned_cols=84  Identities=25%  Similarity=0.416  Sum_probs=67.2

Q ss_pred             CCcCCCCCCHHHHHHHHcCCC--CCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQED--KEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV  331 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~--~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~  331 (513)
                      .+|+++.++|..|+++|...+  ++|.||||+|++ ++.|+||++.                                  
T Consensus         9 ~~WyhG~isR~~Ae~lL~~~g~~~~G~FLVR~S~~~~g~y~LSv~~----------------------------------   54 (111)
T 2hdv_A            9 YPWFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNF----------------------------------   54 (111)
T ss_dssp             STTEEEECCHHHHHHHHHTTGGGGTTEEEEEECSSCTTEEEEEEEE----------------------------------
T ss_pred             CCCcCCCCCHHHHHHHHHHcCCCCCCeEEEEecCCCCCCEEEEEEe----------------------------------
Confidence            569999999999999998753  899999999965 7788888765                                  


Q ss_pred             hccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCC
Q psy17476        332 KDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGL  400 (513)
Q Consensus       332 l~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~  400 (513)
                                                 .+.++|++|....+|.|++. ...|.++.+||+||...+..+
T Consensus        55 ---------------------------~~~v~H~~I~~~~~g~~~l~-~~~F~sl~~LV~~y~~~~l~~   95 (111)
T 2hdv_A           55 ---------------------------QGKAKHLRLSLNAAGQCRVQ-HLHFQSIFDMLEHFRVHPIPL   95 (111)
T ss_dssp             ---------------------------TTEEEEEEEEECTTCCEEET-TEEESSHHHHHHHHTTSCCC-
T ss_pred             ---------------------------CCeEEEEEEEEcCCCCEEeC-CceeCCHHHHHHHHhhCCccc
Confidence                                       34566777766556667765 578999999999999876543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.02  E-value=4.4e-10  Score=113.61  Aligned_cols=83  Identities=17%  Similarity=0.228  Sum_probs=68.9

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcC-CCCceeceeeEEEeCCee
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRL-QHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~  497 (513)
                      +..++|++.+.||+|+||.||+++.+.++..+++|...       ...+.+.+|+++|+.+ +|||||++++++.+.+.+
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~   99 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL   99 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence            45578999999999999999999998877777666432       2235688999999988 799999999999999999


Q ss_pred             EEEEccCCCCc
Q psy17476        498 YIVTDTSSFRL  508 (513)
Q Consensus       498 ~lV~E~~~~Gl  508 (513)
                      |||||||+||-
T Consensus       100 ~lv~E~~~gg~  110 (353)
T 3txo_A          100 FFVMEFVNGGD  110 (353)
T ss_dssp             EEEEECCCSCB
T ss_pred             EEEEeCCCCCc
Confidence            99999999863

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.02  E-value=5.7e-10  Score=112.40  Aligned_cols=83  Identities=16%  Similarity=0.269  Sum_probs=69.1

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcC-CCCceeceeeEEEeCCe
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRL-QHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~  496 (513)
                      .+..++|.+.+.||+|+||.||+|+++.++..+++|...       ...+.+..|..+|+.+ +|||||++++++.+.+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            345678999999999999999999998777766666322       2345688899999876 99999999999999999


Q ss_pred             eEEEEccCCCC
Q psy17476        497 IYIVTDTSSFR  507 (513)
Q Consensus       497 ~~lV~E~~~~G  507 (513)
                      +|||||||+||
T Consensus        93 ~~lv~E~~~gg  103 (345)
T 1xjd_A           93 LFFVMEYLNGG  103 (345)
T ss_dssp             EEEEEECCTTC
T ss_pred             EEEEEeCCCCC
Confidence            99999999986

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.02  E-value=4.7e-10  Score=113.01  Aligned_cols=82  Identities=18%  Similarity=0.169  Sum_probs=68.7

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC----C---HHHHHHHHHHHhcC-CCCceeceeeEEEeCCeeE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM----S---EDDFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIY  498 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~----~---~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~  498 (513)
                      ..++|++.+.||+|+||.||+++.+.++..+++|....    .   .+.+.+|+.+|+++ +|||||++++++.+...+|
T Consensus         7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   86 (345)
T 3a8x_A            7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF   86 (345)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence            45689999999999999999999987766666663221    1   23578899999988 8999999999999999999


Q ss_pred             EEEccCCCCc
Q psy17476        499 IVTDTSSFRL  508 (513)
Q Consensus       499 lV~E~~~~Gl  508 (513)
                      ||||||+||-
T Consensus        87 lv~e~~~gg~   96 (345)
T 3a8x_A           87 FVIEYVNGGD   96 (345)
T ss_dssp             EEECCCCSCB
T ss_pred             EEEeCCCCCc
Confidence            9999999863

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.02  E-value=3.6e-10  Score=108.88  Aligned_cols=83  Identities=24%  Similarity=0.441  Sum_probs=67.0

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEee--cCCCC---HHHHHHHHHHHhcCCCCceeceeeEEEeC--Ce
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMK--EGTMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKH--RP  496 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k--~~~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~--~~  496 (513)
                      +.+..++|++.+.||+|+||.||+|.+.+. .++++.  ....+   .+.|.+|+.+|++++|||||++++++...  ..
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   83 (271)
T 3kmu_A            5 SGIDFKQLNFLTKLNENHSGELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH   83 (271)
T ss_dssp             CCCCGGGCEEEEEEEEETTEEEEEEEETTE-EEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSS
T ss_pred             CCCCHHHhHHHHHhcCCCcceEEEEEECCe-eEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCC
Confidence            466778999999999999999999998643 333322  22222   24689999999999999999999999876  78


Q ss_pred             eEEEEccCCCC
Q psy17476        497 IYIVTDTSSFR  507 (513)
Q Consensus       497 ~~lV~E~~~~G  507 (513)
                      .++|||||++|
T Consensus        84 ~~lv~e~~~~~   94 (271)
T 3kmu_A           84 PTLITHWMPYG   94 (271)
T ss_dssp             CEEEEECCTTC
T ss_pred             eEeeecccCCC
Confidence            89999999974

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.02  E-value=6.1e-10  Score=108.87  Aligned_cols=87  Identities=29%  Similarity=0.551  Sum_probs=69.0

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCCH---HHHHHHHHHHhcCCCCceeceeeEEEeCCee
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSE---DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~---~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      .+.+++...+|++.+.||+|+||.||+|.+.....+++++......   +.|.+|+.+|++++||||+++++++. ....
T Consensus        16 ~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~   94 (289)
T 3og7_A           16 ADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQL   94 (289)
T ss_dssp             --CCBCCTTSCEEEEEEEECSSEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred             CCCCccCccceeeeeEecCCCCeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCcc
Confidence            5678999999999999999999999999887653333433333332   46899999999999999999999664 5678


Q ss_pred             EEEEccCCCCc
Q psy17476        498 YIVTDTSSFRL  508 (513)
Q Consensus       498 ~lV~E~~~~Gl  508 (513)
                      ++|||||++|.
T Consensus        95 ~lv~e~~~~~~  105 (289)
T 3og7_A           95 AIVTQWCEGSS  105 (289)
T ss_dssp             EEEEECCCEEE
T ss_pred             EEEEEecCCCc
Confidence            99999999763

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.02  E-value=4.5e-10  Score=118.72  Aligned_cols=79  Identities=25%  Similarity=0.331  Sum_probs=64.6

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecC------CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG------TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~------~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      +.|++.+.||+|+||.||+|..+.+...+++|..      ......+.+|+.+|+.++|||||+++++|.+...+|||||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            4699999999999999999999876665555532      1224578999999999999999999999999999999999


Q ss_pred             cCCCC
Q psy17476        503 TSSFR  507 (513)
Q Consensus       503 ~~~~G  507 (513)
                      ||++|
T Consensus       117 ~~~~g  121 (494)
T 3lij_A          117 CYKGG  121 (494)
T ss_dssp             CCCSC
T ss_pred             cCCCC
Confidence            99986

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.01  E-value=2.2e-10  Score=112.41  Aligned_cols=86  Identities=23%  Similarity=0.353  Sum_probs=56.9

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-----CHHHHHHHHHHHhcCCCCceeceeeEEEeCCe
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-----SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-----~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  496 (513)
                      ..|.+..++|.+.+.||+|+||.||+|....++..+++|....     ..+++.+|+.+|++++||||+++++++...+.
T Consensus         8 ~p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   87 (303)
T 2vwi_A            8 LPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE   87 (303)
T ss_dssp             -----CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSC
T ss_pred             cccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCC
Confidence            3577888999999999999999999999876666666664322     23568899999999999999999999999999


Q ss_pred             eEEEEccCCCC
Q psy17476        497 IYIVTDTSSFR  507 (513)
Q Consensus       497 ~~lV~E~~~~G  507 (513)
                      .++||||+++|
T Consensus        88 ~~lv~e~~~~~   98 (303)
T 2vwi_A           88 LWLVMKLLSGG   98 (303)
T ss_dssp             EEEEEECCTTC
T ss_pred             cEEEehhccCC
Confidence            99999999886

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.01  E-value=4e-10  Score=109.86  Aligned_cols=86  Identities=20%  Similarity=0.296  Sum_probs=69.0

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC--H---H-HHHHHHHHHhcCCCCceeceeeEEEeCCee
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS--E---D-DFIEEAKVMTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~--~---~-~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      |++..++|++.+.||+|+||.||++....++..+++|.....  .   . .+.++..+++.++||||+++++++.+++..
T Consensus         2 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~   81 (290)
T 3fme_A            2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV   81 (290)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSE
T ss_pred             CcccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCE
Confidence            567788999999999999999999999776666666633221  1   1 244455568889999999999999999999


Q ss_pred             EEEEccCCCCcc
Q psy17476        498 YIVTDTSSFRLG  509 (513)
Q Consensus       498 ~lV~E~~~~Gl~  509 (513)
                      +||||||+++|.
T Consensus        82 ~lv~e~~~~~l~   93 (290)
T 3fme_A           82 WICMELMDTSLD   93 (290)
T ss_dssp             EEEEECCSEEHH
T ss_pred             EEEEehhccchH
Confidence            999999998763

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*

Probab=99.01  E-value=1e-09  Score=95.08  Aligned_cols=80  Identities=33%  Similarity=0.596  Sum_probs=65.2

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      ..|+++.++|.+|+++|.. .++|.||||++++ .+.|+||++.                                    
T Consensus        26 ~~WyhG~isR~eAe~lL~~-~~~G~FLVR~S~~~~g~y~LSv~~------------------------------------   68 (138)
T 2crh_A           26 HLWYAGPMERAGAESILAN-RSDGTFLVRQRVKDAAEFAISIKY------------------------------------   68 (138)
T ss_dssp             SSSBCCSCCHHHHHHHTTT-SCTTEEEEECCSSTTCCCEEEEEE------------------------------------
T ss_pred             CCcccCCCCHHHHHHHhcC-CCCCEEEEEECCCCCCCEEEEEEE------------------------------------
Confidence            3599999999999999986 5889999999976 6889888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNS  397 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~  397 (513)
                                               .+.++|++|. ..+|.|++.+...|.++.+||+||....
T Consensus        69 -------------------------~~~v~H~~I~-~~~g~~~l~~~~~F~sl~eLV~~y~~~~  106 (138)
T 2crh_A           69 -------------------------NVEVKHIKIM-TAEGLYRITEKKAFRGLTELVEFYQQNS  106 (138)
T ss_dssp             -------------------------TTEEEEEECE-EETTEEESSTTCCBSSHHHHHHHHTTSC
T ss_pred             -------------------------CCeEEEEEEE-eCCCEEEECCCCccCCHHHHHHHHHhCc
Confidence                                     2456677663 4556677776788999999999999876

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.01  E-value=9e-10  Score=109.63  Aligned_cols=79  Identities=18%  Similarity=0.205  Sum_probs=66.3

Q ss_pred             CceeEeEecccccceEEEEEEeCceeeEEeec----CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccCC
Q psy17476        430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE----GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS  505 (513)
Q Consensus       430 ~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~----~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~~  505 (513)
                      .|...+.||+|+||.||+|....++..+++|.    .....+.+.+|+.+|++++|||||++++++...+..+||||||+
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  125 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQ  125 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCC
Confidence            46677799999999999999886555555553    22234678999999999999999999999999999999999999


Q ss_pred             CCc
Q psy17476        506 FRL  508 (513)
Q Consensus       506 ~Gl  508 (513)
                      +|.
T Consensus       126 ~~~  128 (321)
T 2c30_A          126 GGA  128 (321)
T ss_dssp             SCB
T ss_pred             CCC
Confidence            874

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.01  E-value=5.7e-10  Score=108.49  Aligned_cols=80  Identities=29%  Similarity=0.296  Sum_probs=68.0

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecC---CCC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG---TMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~---~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      .++|++.+.||+|+||.||+|....++..+++|..   ...   .+.+.+|+.++++++||||+++++++......++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            46899999999999999999999876666655532   222   246889999999999999999999999999999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      |||++|
T Consensus        85 e~~~~~   90 (284)
T 3kk8_A           85 DLVTGG   90 (284)
T ss_dssp             CCCCSC
T ss_pred             ecCCCC
Confidence            999986

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A*

Probab=99.01  E-value=3.8e-10  Score=92.55  Aligned_cols=81  Identities=23%  Similarity=0.507  Sum_probs=64.1

Q ss_pred             CCCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        254 PKAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       254 p~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ..+|+++.++|.+|+++|....++|+||||+|++ .+.|+||++.                                   
T Consensus         4 ~~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~-----------------------------------   48 (102)
T 2cia_A            4 GSEWYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKA-----------------------------------   48 (102)
T ss_dssp             -CTTBCCSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEECC-----------------------------------
T ss_pred             CCccccCCCCHHHHHHHHhhCCCCcEEEEEECCCCCCCEEEEEEe-----------------------------------
Confidence            3569999999999999996445889999999976 7789888764                                   


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNS  397 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~  397 (513)
                                                .+.++|++|. ..++.|++.+ ..|.++.+||++|...+
T Consensus        49 --------------------------~~~v~H~~I~-~~~g~~~l~~-~~F~sl~~LV~~y~~~~   85 (102)
T 2cia_A           49 --------------------------SGKNKHFKVQ-LVDNVYCIGQ-RRFHTMDELVEHYKKAP   85 (102)
T ss_dssp             --------------------------SSSCEEEEEE-EETTEEEETT-EEESSHHHHHHHHHHSC
T ss_pred             --------------------------CCeeEEEEEE-ecCCEEEECC-cCcCCHHHHHHHHhhCc
Confidence                                      2456677776 3456677665 68999999999999863

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.01  E-value=5.8e-10  Score=108.31  Aligned_cols=82  Identities=21%  Similarity=0.351  Sum_probs=69.8

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      ..++|++.+.||+|+||.||+|....+...+++|...       .....+.+|+.++++++||||+++++++.+....++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            4568999999999999999999998877666666321       123568899999999999999999999999999999


Q ss_pred             EEccCCCCc
Q psy17476        500 VTDTSSFRL  508 (513)
Q Consensus       500 V~E~~~~Gl  508 (513)
                      ||||+++|.
T Consensus        87 v~e~~~~~~   95 (279)
T 3fdn_A           87 ILEYAPLGT   95 (279)
T ss_dssp             EECCCTTEE
T ss_pred             EEecCCCCc
Confidence            999999763

>2lnw_A VAV-2, guanine nucleotide exchange factor VAV2; signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2lnx_A

Probab=99.01  E-value=8.4e-10  Score=93.48  Aligned_cols=79  Identities=23%  Similarity=0.511  Sum_probs=64.9

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|.+|+++|.. .++|+||||.|++ .+.|+||++.                                    
T Consensus        22 ~~WyhG~isR~eAe~lL~~-~~~G~FLVR~S~~~~g~y~LSv~~------------------------------------   64 (122)
T 2lnw_A           22 YPWFAGNMERQQTDNLLKS-HASGTYLIRERPAEAERFAISIKF------------------------------------   64 (122)
T ss_dssp             STTBCCSCCHHHHHHHHHH-SCTTBEEEEECCCSSEEEEEEEEC------------------------------------
T ss_pred             CcCCCcCCCHHHHHHHhcC-CCCCeEEEEeCCCCCCcEEEEEEe------------------------------------
Confidence            4699999999999999976 5799999999975 6788888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhccccc
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHN  396 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~  396 (513)
                                               .+.++|++|... ++.|++.+...|.++.+||++|...
T Consensus        65 -------------------------~~~v~H~~I~~~-~~~~~l~~~~~F~sl~eLV~~y~~~  101 (122)
T 2lnw_A           65 -------------------------NDEVKHIKVVEK-DNWIHITEAKKFDSLLELVEYYQCH  101 (122)
T ss_dssp             -------------------------SSCEEEEEEEEE-TTEEESSSSCCBSSHHHHHHHHHHS
T ss_pred             -------------------------CCcEEEEEEEEc-CCEEEECCCCeECCHHHHHHHHhhC
Confidence                                     345677777653 4567777778999999999999987

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.01  E-value=2.8e-10  Score=113.10  Aligned_cols=83  Identities=22%  Similarity=0.348  Sum_probs=68.2

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC---CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM---SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~---~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      +....+|.+.+.||+|+||.||+|.++....+++++....   ..+.|.+|+.+|++++|||||++++++...+..++||
T Consensus        35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  114 (321)
T 2qkw_B           35 EEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIY  114 (321)
T ss_dssp             CCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEE
T ss_pred             HHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence            3455788999999999999999999765545554443222   2357899999999999999999999999999999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      |||++|
T Consensus       115 e~~~~~  120 (321)
T 2qkw_B          115 KYMENG  120 (321)
T ss_dssp             ECCTTC
T ss_pred             EcCCCC
Confidence            999875

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.00  E-value=4.4e-10  Score=110.16  Aligned_cols=81  Identities=23%  Similarity=0.411  Sum_probs=68.5

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC------HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      ++|++.+.||+|+||.||+|....++..+++|.....      .+.+.+|+.++++++||||+++++++..++..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            5789999999999999999999876666666643221      2568899999999999999999999999999999999


Q ss_pred             cCCCCcc
Q psy17476        503 TSSFRLG  509 (513)
Q Consensus       503 ~~~~Gl~  509 (513)
                      |++++|.
T Consensus        83 ~~~~~L~   89 (299)
T 2r3i_A           83 FLHQDLK   89 (299)
T ss_dssp             CCSEEHH
T ss_pred             cccCCHH
Confidence            9998764

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.00  E-value=6.2e-10  Score=117.38  Aligned_cols=80  Identities=21%  Similarity=0.330  Sum_probs=69.5

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecC------CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG------TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~------~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      .+.|.+.+.||+|+||.||+|..+.++..+++|..      ......+.+|+++|++++|||||++++++.....+|+||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            36799999999999999999999876666666532      334567999999999999999999999999999999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      |||++|
T Consensus       101 e~~~~~  106 (486)
T 3mwu_A          101 ELYTGG  106 (486)
T ss_dssp             CCCCSC
T ss_pred             EcCCCC
Confidence            999986

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.00  E-value=6.5e-10  Score=119.05  Aligned_cols=83  Identities=16%  Similarity=0.157  Sum_probs=71.2

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeecC-------CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeE
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG-------TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIY  498 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~-------~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  498 (513)
                      +..++|.+.+.||+|+||.||++..+.++..+++|..       ......+.+|+++|++++|||||++++++.+.+.+|
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~  260 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC  260 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence            4567899999999999999999999877777666632       223456889999999999999999999999999999


Q ss_pred             EEEccCCCCc
Q psy17476        499 IVTDTSSFRL  508 (513)
Q Consensus       499 lV~E~~~~Gl  508 (513)
                      ||||||+||-
T Consensus       261 lVmEy~~gg~  270 (576)
T 2acx_A          261 LVLTLMNGGD  270 (576)
T ss_dssp             EEECCCCSCB
T ss_pred             EEEEcCCCCc
Confidence            9999998863

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A

Probab=99.00  E-value=8.3e-10  Score=91.72  Aligned_cols=83  Identities=24%  Similarity=0.430  Sum_probs=65.9

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|.+|+++|....++|.||||+|++ ++.|+||++.                                    
T Consensus         7 ~~Wyhg~isr~~Ae~lL~~~~~~G~FLVR~S~~~~g~y~LSv~~------------------------------------   50 (109)
T 3tkz_A            7 RRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRR------------------------------------   50 (109)
T ss_dssp             CCSBCTTCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEE------------------------------------
T ss_pred             CCceecCCCHHHHHHHHhcCCCCCEEEEEecCCCCCCEEEEEEE------------------------------------
Confidence            469999999999999998655899999999974 7889888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGG  399 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~  399 (513)
                                               .+.++|++|... ++.|.+.+...|.++.+||+||..++..
T Consensus        51 -------------------------~~~v~H~~I~~~-~~~~~~~~~~~F~sl~~LV~~y~~~~~~   90 (109)
T 3tkz_A           51 -------------------------NGAVTHIKIQNT-GDYYDLYGGEKFATLAELVQYYMEHHGQ   90 (109)
T ss_dssp             -------------------------TTEEEEEEEEEC-SSCEESSSSCCBSSHHHHHHHHHHSTTS
T ss_pred             -------------------------CCEEEEEEEEeC-CCEEEecCCcccCCHHHHHHHHHhCcCc
Confidence                                     345666766553 4456566677899999999999987643

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.00  E-value=3.5e-10  Score=114.99  Aligned_cols=89  Identities=21%  Similarity=0.319  Sum_probs=72.3

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC---C---HHHHHHHHHHHhcCCCCceeceeeEEEeC
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM---S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKH  494 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~---~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~  494 (513)
                      ...|++. ..|.+.+.||+|+||.||+|....++..+++|....   .   .+.+.+|+.+|++++|||||++++++...
T Consensus        35 ~~~~~l~-~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~  113 (371)
T 4exu_A           35 KTAWELP-KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPA  113 (371)
T ss_dssp             TEEEEEE-TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             cceeccc-ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheecc
Confidence            4457766 579999999999999999999987766666663322   2   24688999999999999999999999877


Q ss_pred             Cee------EEEEccCCCCccc
Q psy17476        495 RPI------YIVTDTSSFRLGL  510 (513)
Q Consensus       495 ~~~------~lV~E~~~~Gl~~  510 (513)
                      ...      |+|||||.+.|..
T Consensus       114 ~~~~~~~~~~lv~e~~~~~l~~  135 (371)
T 4exu_A          114 SSLRNFYDFYLVMPFMQTDLQK  135 (371)
T ss_dssp             SSSTTCCCCEEEEECCCEEHHH
T ss_pred             CCcccceeEEEEEccccccHHH
Confidence            655      9999999987743

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.00  E-value=4e-10  Score=112.18  Aligned_cols=85  Identities=18%  Similarity=0.259  Sum_probs=68.2

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-C--HHHHHHHHHHHhcCCCCceeceeeEEEeCC--
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-S--EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR--  495 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-~--~~~f~~E~~il~~l~HpNIV~l~g~~~~~~--  495 (513)
                      ..+|.+...+|++.+.||+|+||.||+|++.+  ..+++|.... .  ...+.+|+.+|++++|||||++++++....  
T Consensus        16 ~~n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   93 (322)
T 3soc_A           16 TENLYFQSMPLQLLEVKARGRFGCVWKAQLLN--EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV   93 (322)
T ss_dssp             CCCEEETTEEEEEEEEEECSTTCEEEEEEETT--EEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS
T ss_pred             ccccccchhhchhhheecccCceEEEEEEECC--CEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCC
Confidence            45788999999999999999999999998763  3344443222 2  234667899999999999999999998754  


Q ss_pred             --eeEEEEccCCCC
Q psy17476        496 --PIYIVTDTSSFR  507 (513)
Q Consensus       496 --~~~lV~E~~~~G  507 (513)
                        .++||||||++|
T Consensus        94 ~~~~~lv~e~~~~g  107 (322)
T 3soc_A           94 DVDLWLITAFHEKG  107 (322)
T ss_dssp             SEEEEEEEECCTTC
T ss_pred             CceEEEEEecCCCC
Confidence              379999999985

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.99  E-value=4.4e-10  Score=111.87  Aligned_cols=89  Identities=20%  Similarity=0.368  Sum_probs=71.5

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC--C---HHHHHHHHH-HHhcCCCCceeceeeEEEeC
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM--S---EDDFIEEAK-VMTRLQHQNLVQLYGVCSKH  494 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~--~---~~~f~~E~~-il~~l~HpNIV~l~g~~~~~  494 (513)
                      ...|.+..++|++.+.||+|+||.||+|..+.++..+++|....  .   ...+..|+. +++.++||||+++++++...
T Consensus        14 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~   93 (327)
T 3aln_A           14 EQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE   93 (327)
T ss_dssp             CEEECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS
T ss_pred             HHhcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC
Confidence            35688889999999999999999999999986666665553221  1   234666666 77888999999999999999


Q ss_pred             CeeEEEEccCCCCcc
Q psy17476        495 RPIYIVTDTSSFRLG  509 (513)
Q Consensus       495 ~~~~lV~E~~~~Gl~  509 (513)
                      +..+||||||+++|.
T Consensus        94 ~~~~lv~e~~~~~l~  108 (327)
T 3aln_A           94 GDCWICMELMSTSFD  108 (327)
T ss_dssp             SEEEEEECCCSEEHH
T ss_pred             CceEEEEeecCCChH
Confidence            999999999998864

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.99  E-value=8.6e-10  Score=110.31  Aligned_cols=85  Identities=31%  Similarity=0.474  Sum_probs=68.7

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeCce----eeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceeeEEEe
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSI----DVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYGVCSK  493 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~----~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g~~~~  493 (513)
                      .+++..+.|.+.+.||+|+||.||+|.+....    ..+++|....  .   ...|.+|+.+|++++|||||++++++..
T Consensus        38 ~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  117 (333)
T 1mqb_A           38 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK  117 (333)
T ss_dssp             CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             cccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec
Confidence            34778889999999999999999999986532    2244443221  2   2468999999999999999999999999


Q ss_pred             CCeeEEEEccCCCC
Q psy17476        494 HRPIYIVTDTSSFR  507 (513)
Q Consensus       494 ~~~~~lV~E~~~~G  507 (513)
                      .+..+||||||++|
T Consensus       118 ~~~~~lv~e~~~~~  131 (333)
T 1mqb_A          118 YKPMMIITEYMENG  131 (333)
T ss_dssp             SSSEEEEEECCTTE
T ss_pred             CCCcEEEEeCCCCC
Confidence            99999999999985

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=98.99  E-value=4.2e-10  Score=110.24  Aligned_cols=83  Identities=28%  Similarity=0.559  Sum_probs=66.2

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEe----CceeeEEeec-CCCCH---HHHHHHHHHHhcCCCCceeceeeEEEeC--
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWR----GSIDVAMMKE-GTMSE---DDFIEEAKVMTRLQHQNLVQLYGVCSKH--  494 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~----~~~~v~~~k~-~~~~~---~~f~~E~~il~~l~HpNIV~l~g~~~~~--  494 (513)
                      ++...+|++.+.||+|+||.||+|++.    .++..+++|. .....   +.|.+|+++|++++|||||++++++...  
T Consensus         6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   85 (295)
T 3ugc_A            6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR   85 (295)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred             cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence            456788999999999999999999853    3445555553 22222   4688999999999999999999999653  


Q ss_pred             CeeEEEEccCCCC
Q psy17476        495 RPIYIVTDTSSFR  507 (513)
Q Consensus       495 ~~~~lV~E~~~~G  507 (513)
                      ..++||||||++|
T Consensus        86 ~~~~lv~e~~~~~   98 (295)
T 3ugc_A           86 RNLKLIMEYLPYG   98 (295)
T ss_dssp             TSCEEEEECCTTC
T ss_pred             CceEEEEEeCCCC
Confidence            4689999999875

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=98.99  E-value=6.9e-10  Score=107.86  Aligned_cols=79  Identities=23%  Similarity=0.371  Sum_probs=66.7

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecC---C-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG---T-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIY  498 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~---~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  498 (513)
                      ++|.+.+.||+|+||.||++....++..+++|..   .       ...+.|.+|+.+|++++||||+++++++......+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            4689999999999999999999866555554421   1       12567999999999999999999999999999999


Q ss_pred             EEEccCCCC
Q psy17476        499 IVTDTSSFR  507 (513)
Q Consensus       499 lV~E~~~~G  507 (513)
                      +||||+++|
T Consensus        85 lv~e~~~~~   93 (283)
T 3bhy_A           85 LILELVSGG   93 (283)
T ss_dssp             EEEECCCSC
T ss_pred             EEEeecCCC
Confidence            999999875

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A

Probab=98.99  E-value=1.3e-09  Score=92.18  Aligned_cols=81  Identities=33%  Similarity=0.531  Sum_probs=66.3

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC--CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST--KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~--~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ..|+++.++|..|+++|.. .++|+||||.|++  .+.|+||++.                                   
T Consensus        11 ~~WyhG~isR~eAe~lL~~-~~~G~FLVR~S~~~~~g~y~LSv~~-----------------------------------   54 (120)
T 2iug_A           11 AEWYWGDISREEVNEKLRD-TADGTFLVRDASTKMHGDYTLTLRK-----------------------------------   54 (120)
T ss_dssp             CTTBCCSCCHHHHHHHHTT-CCTTEEEEEECSSGGGCSEEEEEEE-----------------------------------
T ss_pred             CCccccCCCHHHHHHHhcC-CCCcEEEEECCCCCCCCcEEEEEEE-----------------------------------
Confidence            4699999999999999975 6899999999976  5788888765                                   


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSG  398 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~  398 (513)
                                                .+.++|++|... ++.|++.+...|.++.+||+||.....
T Consensus        55 --------------------------~~~v~H~~I~~~-~g~~~l~~~~~F~sl~~LI~~y~~~~~   93 (120)
T 2iug_A           55 --------------------------GGNNKLIKIFHR-DGKYGFSDPLTFSSVVELINHYRNESL   93 (120)
T ss_dssp             --------------------------TTEEEEEEEEEE-TTEEESSSSCCBSSHHHHHHHHHHSCG
T ss_pred             --------------------------CCEEEEEEEEEc-CCEEEECCCCccCCHHHHHHHHHhCcc
Confidence                                      245667777664 566777777889999999999998764

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=98.99  E-value=3.6e-10  Score=117.87  Aligned_cols=86  Identities=22%  Similarity=0.175  Sum_probs=64.2

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      .+.+..++|++.+.||+|+||.||++....++..+++|...       .....+.+|+++|++++|||||++++++...+
T Consensus       142 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~  221 (446)
T 4ejn_A          142 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD  221 (446)
T ss_dssp             --CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT
T ss_pred             ccCCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC
Confidence            44566778999999999999999999998777666666322       12346789999999999999999999999999


Q ss_pred             eeEEEEccCCCCc
Q psy17476        496 PIYIVTDTSSFRL  508 (513)
Q Consensus       496 ~~~lV~E~~~~Gl  508 (513)
                      .+|||||||++|.
T Consensus       222 ~~~lv~e~~~~~~  234 (446)
T 4ejn_A          222 RLCFVMEYANGGE  234 (446)
T ss_dssp             EEEEEECCCSSCB
T ss_pred             EEEEEEeeCCCCc
Confidence            9999999999863

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=98.98  E-value=2.7e-10  Score=113.36  Aligned_cols=90  Identities=22%  Similarity=0.302  Sum_probs=72.1

Q ss_pred             CCCCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC----CHHHHHHHHHHHhcCCCCceeceeeEEEeC
Q psy17476        419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM----SEDDFIEEAKVMTRLQHQNLVQLYGVCSKH  494 (513)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~----~~~~f~~E~~il~~l~HpNIV~l~g~~~~~  494 (513)
                      ++...+.+..++|.+.+.||+|+||.||+|.......++++.....    ....|.+|+.+|++++|||||++++++...
T Consensus        20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   99 (326)
T 3uim_A           20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP   99 (326)
T ss_dssp             CCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCS
T ss_pred             ecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecC
Confidence            4455667788899999999999999999998665444444432221    123689999999999999999999999999


Q ss_pred             CeeEEEEccCCCCc
Q psy17476        495 RPIYIVTDTSSFRL  508 (513)
Q Consensus       495 ~~~~lV~E~~~~Gl  508 (513)
                      ...++|||||++|-
T Consensus       100 ~~~~lv~e~~~~~~  113 (326)
T 3uim_A          100 TERLLVYPYMANGS  113 (326)
T ss_dssp             SCCEEEEECCTTCB
T ss_pred             CceEEEEEeccCCC
Confidence            99999999999853

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=98.98  E-value=7.6e-10  Score=108.35  Aligned_cols=81  Identities=17%  Similarity=0.167  Sum_probs=68.6

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCC----C---CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT----M---SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~----~---~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      ..+|.+.+.||+|+||.||++....+...+++|...    .   ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            457899999999999999999998777766666321    1   134688999999999999999999999999999999


Q ss_pred             EccCCCCc
Q psy17476        501 TDTSSFRL  508 (513)
Q Consensus       501 ~E~~~~Gl  508 (513)
                      ||||++|.
T Consensus        94 ~e~~~~~~  101 (294)
T 2rku_A           94 LELCRRRS  101 (294)
T ss_dssp             EECCTTCB
T ss_pred             EecCCCCC
Confidence            99999753

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.98  E-value=7.5e-10  Score=116.67  Aligned_cols=82  Identities=20%  Similarity=0.244  Sum_probs=69.8

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecC-------CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG-------TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~-------~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      -.+.|++.+.||+|+||.||+|....++..+++|..       ....+.+.+|+.+|++++|||||++++++.+...+|+
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            346799999999999999999999876666655532       2235679999999999999999999999999999999


Q ss_pred             EEccCCCCc
Q psy17476        500 VTDTSSFRL  508 (513)
Q Consensus       500 V~E~~~~Gl  508 (513)
                      |||||.+|-
T Consensus       104 v~e~~~~~~  112 (484)
T 3nyv_A          104 VGEVYTGGE  112 (484)
T ss_dssp             EECCCCSCB
T ss_pred             EEecCCCCC
Confidence            999999863

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=98.98  E-value=9.8e-10  Score=106.03  Aligned_cols=83  Identities=36%  Similarity=0.535  Sum_probs=65.1

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCee
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      ++..++|++.+.||+|+||.||+|.+.+. .++++....       ...+.+.+|++++++++||||+++++++...+..
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (271)
T 3dtc_A            3 EIDFAELTLEEIIGIGGFGKVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNL   81 (271)
T ss_dssp             BCCTTSEEEEEEEEEETTEEEEEEEETTE-EEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--C
T ss_pred             ccchhheeeeeeeccCCCeEEEEEEEcCC-eEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence            45677899999999999999999998632 333332111       1235789999999999999999999999999999


Q ss_pred             EEEEccCCCCc
Q psy17476        498 YIVTDTSSFRL  508 (513)
Q Consensus       498 ~lV~E~~~~Gl  508 (513)
                      ++|||||++|.
T Consensus        82 ~lv~e~~~~~~   92 (271)
T 3dtc_A           82 CLVMEFARGGP   92 (271)
T ss_dssp             EEEEECCTTEE
T ss_pred             EEEEEcCCCCC
Confidence            99999999864

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.98  E-value=1.2e-09  Score=106.23  Aligned_cols=82  Identities=18%  Similarity=0.319  Sum_probs=69.6

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeecC-------CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeE
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG-------TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIY  498 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~-------~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  498 (513)
                      +..++|.+.+.||+|+||.||+|....+...+++|..       ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus        11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   90 (284)
T 2vgo_A           11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY   90 (284)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEE
Confidence            3456899999999999999999999876666665532       122457899999999999999999999999999999


Q ss_pred             EEEccCCCC
Q psy17476        499 IVTDTSSFR  507 (513)
Q Consensus       499 lV~E~~~~G  507 (513)
                      +||||+++|
T Consensus        91 lv~e~~~~~   99 (284)
T 2vgo_A           91 LMLEFAPRG   99 (284)
T ss_dssp             EEECCCTTE
T ss_pred             EEEEeCCCC
Confidence            999999875

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=98.98  E-value=8.9e-10  Score=115.80  Aligned_cols=81  Identities=23%  Similarity=0.298  Sum_probs=69.0

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      ...+|.+.+.||+|+||.||+|.+..++..+++|...       ...+.+.+|+.+|+.++|||||++++++...+.+||
T Consensus        14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l   93 (476)
T 2y94_A           14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM   93 (476)
T ss_dssp             EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            3468999999999999999999998766666666322       123568899999999999999999999999999999


Q ss_pred             EEccCCCC
Q psy17476        500 VTDTSSFR  507 (513)
Q Consensus       500 V~E~~~~G  507 (513)
                      |||||+||
T Consensus        94 v~E~~~gg  101 (476)
T 2y94_A           94 VMEYVSGG  101 (476)
T ss_dssp             EEECCSSE
T ss_pred             EEeCCCCC
Confidence            99999875

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.98  E-value=2.8e-10  Score=113.43  Aligned_cols=81  Identities=22%  Similarity=0.367  Sum_probs=67.4

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCCH-----HHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSE-----DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~-----~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      ++|.+.+.||+|+||.||+|....++..+++|......     ..+.+|+++|++++|||||++++++...+..+|||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            47899999999999999999998766666666332221     1356899999999999999999999999999999999


Q ss_pred             CCCCcc
Q psy17476        504 SSFRLG  509 (513)
Q Consensus       504 ~~~Gl~  509 (513)
                      |+++|.
T Consensus        82 ~~~~l~   87 (324)
T 3mtl_A           82 LDKDLK   87 (324)
T ss_dssp             CSEEHH
T ss_pred             cccCHH
Confidence            998763

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=98.98  E-value=7.7e-10  Score=110.75  Aligned_cols=82  Identities=17%  Similarity=0.150  Sum_probs=69.3

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      ...+|.+.+.||+|+||.||++....+...+++|....       ..+.+.+|+.++++++||||+++++++.+.+.+||
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            34679999999999999999999988777766663211       13468899999999999999999999999999999


Q ss_pred             EEccCCCCc
Q psy17476        500 VTDTSSFRL  508 (513)
Q Consensus       500 V~E~~~~Gl  508 (513)
                      |||||++|.
T Consensus       119 v~e~~~~~~  127 (335)
T 2owb_A          119 VLELCRRRS  127 (335)
T ss_dssp             EECCCTTCB
T ss_pred             EEecCCCCC
Confidence            999999753

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.98  E-value=7.7e-10  Score=109.92  Aligned_cols=80  Identities=21%  Similarity=0.273  Sum_probs=67.5

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCC----------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCee
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT----------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~----------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      .+.|.+.+.||+|+||.||++....++..+++|...          ...+.+.+|+.+|++++||||+++++++.+....
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            356899999999999999999998766655555211          1246799999999999999999999999999999


Q ss_pred             EEEEccCCCC
Q psy17476        498 YIVTDTSSFR  507 (513)
Q Consensus       498 ~lV~E~~~~G  507 (513)
                      ++|||||++|
T Consensus        91 ~lv~e~~~~~  100 (321)
T 2a2a_A           91 VLILELVSGG  100 (321)
T ss_dssp             EEEECCCCSC
T ss_pred             EEEEEcCCCC
Confidence            9999999875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=98.98  E-value=9.6e-10  Score=112.79  Aligned_cols=81  Identities=21%  Similarity=0.301  Sum_probs=68.3

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-----CCHHHHHHHHHHHhcCCCCceeceeeEEEeCC--eeEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-----MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHR--PIYI  499 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-----~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~--~~~l  499 (513)
                      ....|.+.+.||+|+||.||+|.+..++..+++|...     ...+.+.+|+++|++++|||||++++++....  ..+|
T Consensus         7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l   86 (396)
T 4eut_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL   86 (396)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred             CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence            3467999999999999999999998766666666322     23467889999999999999999999998765  7899


Q ss_pred             EEccCCCC
Q psy17476        500 VTDTSSFR  507 (513)
Q Consensus       500 V~E~~~~G  507 (513)
                      |||||++|
T Consensus        87 v~e~~~~g   94 (396)
T 4eut_A           87 IMEFCPCG   94 (396)
T ss_dssp             EECCCTTE
T ss_pred             EEecCCCC
Confidence            99999975

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.98  E-value=7.7e-10  Score=110.42  Aligned_cols=82  Identities=23%  Similarity=0.400  Sum_probs=69.4

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecC---CCC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG---TMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~---~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      ..++|++.+.||+|+||.||+|....++..+++|..   ...   .+.+.+|+.+|++++|||||++++++......+||
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  102 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV  102 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence            457899999999999999999999876666655532   222   23578999999999999999999999999999999


Q ss_pred             EccCCCCc
Q psy17476        501 TDTSSFRL  508 (513)
Q Consensus       501 ~E~~~~Gl  508 (513)
                      |||+++|+
T Consensus       103 ~e~~~~~~  110 (331)
T 4aaa_A          103 FEFVDHTI  110 (331)
T ss_dssp             EECCSEEH
T ss_pred             EecCCcch
Confidence            99999875

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.97  E-value=9.2e-10  Score=106.83  Aligned_cols=87  Identities=38%  Similarity=0.622  Sum_probs=67.4

Q ss_pred             CCCCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecC--CCCHHHHHHHHHHHhcCCCCceeceeeEEEeC-C
Q psy17476        419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG--TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKH-R  495 (513)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~--~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~-~  495 (513)
                      +....|.+..++|++.+.||+|+||.||++.+.+  ..+++|..  ....+.|.+|+++|++++||||+++++++... +
T Consensus        11 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   88 (278)
T 1byg_A           11 FYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRG--NKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG   88 (278)
T ss_dssp             ----CCBCCGGGEEEEEEEEECSSCEEEEEEETT--EEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--
T ss_pred             hhhccccCChhhceEEeEEecCCCceEEEEEEcC--CEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC
Confidence            4456788999999999999999999999998763  33444422  22456799999999999999999999997654 4


Q ss_pred             eeEEEEccCCCC
Q psy17476        496 PIYIVTDTSSFR  507 (513)
Q Consensus       496 ~~~lV~E~~~~G  507 (513)
                      ..++||||+++|
T Consensus        89 ~~~lv~e~~~~~  100 (278)
T 1byg_A           89 GLYIVTEYMAKG  100 (278)
T ss_dssp             CCEEEECCCTTE
T ss_pred             ceEEEEecCCCC
Confidence            789999999984

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.97  E-value=1.2e-09  Score=110.37  Aligned_cols=82  Identities=20%  Similarity=0.225  Sum_probs=69.6

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcC-CCCceeceeeEEEeCCee
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRL-QHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~  497 (513)
                      +..++|.+.+.||+|+||.||+++.+.++..+++|...       ...+.+.+|+++|+.+ +||||+++++++.+.+.+
T Consensus        17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   96 (353)
T 2i0e_A           17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL   96 (353)
T ss_dssp             --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred             CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence            34578999999999999999999998877777766422       2345688999999988 899999999999999999


Q ss_pred             EEEEccCCCC
Q psy17476        498 YIVTDTSSFR  507 (513)
Q Consensus       498 ~lV~E~~~~G  507 (513)
                      |||||||+||
T Consensus        97 ~lv~E~~~gg  106 (353)
T 2i0e_A           97 YFVMEYVNGG  106 (353)
T ss_dssp             EEEEECCCSC
T ss_pred             EEEEeCCCCC
Confidence            9999999986

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=98.97  E-value=1.1e-09  Score=107.00  Aligned_cols=86  Identities=23%  Similarity=0.239  Sum_probs=68.5

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecC----CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeE
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG----TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIY  498 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~----~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  498 (513)
                      .+....+++.....||+|+||.||+|....+...+++|..    ....+.+.+|+.++++++|||||++++++...+..+
T Consensus        16 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   95 (295)
T 2clq_A           16 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIK   95 (295)
T ss_dssp             CEEECBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             cccccccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEE
Confidence            4445555666667999999999999998776665555531    223467899999999999999999999999999999


Q ss_pred             EEEccCCCCc
Q psy17476        499 IVTDTSSFRL  508 (513)
Q Consensus       499 lV~E~~~~Gl  508 (513)
                      +||||+++|.
T Consensus        96 lv~e~~~~~~  105 (295)
T 2clq_A           96 IFMEQVPGGS  105 (295)
T ss_dssp             EEEECCSEEE
T ss_pred             EEEEeCCCCC
Confidence            9999998753

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus}

Probab=98.97  E-value=6.9e-10  Score=96.61  Aligned_cols=88  Identities=32%  Similarity=0.516  Sum_probs=66.1

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC---CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST---KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEV  331 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~---~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~  331 (513)
                      ..|+++.++|.+|+++|....++|.||||++++   .+.|+||++.   .                              
T Consensus        23 ~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~~~g~y~LSv~~---~------------------------------   69 (141)
T 2eo6_A           23 KPWYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFF---N------------------------------   69 (141)
T ss_dssp             CSSEEESCCHHHHHHHHHHHCCTTCBCEEECSTTCSSCSEEEEEEE---T------------------------------
T ss_pred             CCeEecCCCHHHHHHHhhccCCCceEEEEECCCCCCCCCEEEEEEE---C------------------------------
Confidence            469999999999999996545799999999974   6788888776   2                              


Q ss_pred             hccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCcc-EEEe----cCcccCChhhhhhcccccCCCCccc
Q psy17476        332 KDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE-FFLS----EKHCCHSIPEVVNYHRHNSGGLASR  403 (513)
Q Consensus       332 l~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~-~~i~----~~~~F~sl~eLi~~~~~~~~~~~~~  403 (513)
                                                  +.++|++|....+|. |.+.    ....|.++.+||+||.....+++++
T Consensus        70 ----------------------------~~v~H~~I~~~~~g~~~~l~~~~~~~~~F~sl~eLV~~y~~~~~~l~~~  118 (141)
T 2eo6_A           70 ----------------------------KRVYNIPVRFIEATKQYALGKKKNGEEYFGSVVEIVNSHQHNPLVLIDS  118 (141)
T ss_dssp             ----------------------------TEEEEEEECEETTTTEECSSSCCTTCCCBSSHHHHHHHHHHSCCCCCCS
T ss_pred             ----------------------------CEEEEEEEEEeCCCCEEEEccccCCCCccCCHHHHHHHHhhCCccceec
Confidence                                        345555554434444 3333    2578999999999999998877543

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=98.97  E-value=1.1e-09  Score=116.85  Aligned_cols=83  Identities=14%  Similarity=0.148  Sum_probs=70.9

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeE
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIY  498 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  498 (513)
                      +..++|.+.+.||+|+||.||+++.+.++..+++|...       ...+.+.+|+++|++++|||||++++++.+...+|
T Consensus       182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~  261 (543)
T 3c4z_A          182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLC  261 (543)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEE
Confidence            34578999999999999999999998777776666322       23456889999999999999999999999999999


Q ss_pred             EEEccCCCCc
Q psy17476        499 IVTDTSSFRL  508 (513)
Q Consensus       499 lV~E~~~~Gl  508 (513)
                      ||||||+||-
T Consensus       262 lVmE~~~gg~  271 (543)
T 3c4z_A          262 LVMTIMNGGD  271 (543)
T ss_dssp             EEECCCTTCB
T ss_pred             EEEEeccCCC
Confidence            9999999863

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A

Probab=98.97  E-value=1.5e-09  Score=93.09  Aligned_cols=103  Identities=27%  Similarity=0.487  Sum_probs=74.7

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      ..|+++.++|.+|+++|.. .++|+||||+|++ ++.|+||++.....+.++   +                        
T Consensus        20 ~~Wyhg~isR~eAe~lL~~-~~~G~FLVR~S~s~~g~y~LSv~~~~~~~~~~---~------------------------   71 (131)
T 2kno_A           20 KFWYKPHLSRDQAIALLKD-KDPGAFLIRDSHSFQGAYGLALKVATPPPSAQ---P------------------------   71 (131)
T ss_dssp             HHHBCTTCCHHHHHHHHTT-SCTTBEEEEECSSSTTEEEEEEECSCCSSSSS---S------------------------
T ss_pred             CCceecCCCHHHHHHHhcC-CCCCeEEEecCCCCCCCEEEEEEeCCCCcccc---c------------------------
Confidence            3599999999999999975 5799999999975 788999987643222110   0                        


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEE---ecCcccCChhhhhhcccccCCCCccccC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFL---SEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i---~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                      +.|+                   .....++|++|....++ |++   .....|.++.+||++|.....++++++.
T Consensus        72 ~~g~-------------------~~~~~v~H~~I~~~~~g-~~l~g~~~~~~F~SL~eLV~~y~~~~~~L~~~L~  126 (131)
T 2kno_A           72 WKGD-------------------PVEQLVRHFLIETGPKG-VKIKGCPSEPYFGSLSALVSQHSISPISLPCCLR  126 (131)
T ss_dssp             CCSC-------------------HHHHHEEEEEEECCSSC-CCEETCSSCCCCCSHHHHHHTTTTCCSSCSSCCB
T ss_pred             cccc-------------------ccCCceEEEEEEECCCC-CEEecCCCCCccCCHHHHHHHHhhCCCCCCeECC
Confidence            0000                   00025778888765555 776   4567899999999999999888887764

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.97  E-value=1.2e-09  Score=107.93  Aligned_cols=82  Identities=21%  Similarity=0.372  Sum_probs=64.2

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeecC--CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG--TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~--~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      ...+.|.+.+.||+|+||.||+|....++..+++|..  ....+.+.+|+.+|++++||||+++++++.....+++||||
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY  105 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence            3567899999999999999999999876666666632  22346799999999999999999999999999999999999


Q ss_pred             CCCC
Q psy17476        504 SSFR  507 (513)
Q Consensus       504 ~~~G  507 (513)
                      +++|
T Consensus       106 ~~~~  109 (314)
T 3com_A          106 CGAG  109 (314)
T ss_dssp             CTTE
T ss_pred             CCCC
Confidence            9985

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=98.97  E-value=1.6e-09  Score=106.48  Aligned_cols=82  Identities=21%  Similarity=0.280  Sum_probs=69.4

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecC-----CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG-----TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~-----~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      +.+.|...+.||+|+||.||+|....++..+++|..     ....+.+.+|+.+|++++||||+++++++......++||
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   99 (303)
T 3a7i_A           20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM   99 (303)
T ss_dssp             GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence            346689999999999999999998776666666532     223467999999999999999999999999999999999


Q ss_pred             ccCCCCc
Q psy17476        502 DTSSFRL  508 (513)
Q Consensus       502 E~~~~Gl  508 (513)
                      ||+++|.
T Consensus       100 e~~~~~~  106 (303)
T 3a7i_A          100 EYLGGGS  106 (303)
T ss_dssp             ECCTTEE
T ss_pred             EeCCCCc
Confidence            9999863

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=98.97  E-value=2.1e-09  Score=105.47  Aligned_cols=83  Identities=20%  Similarity=0.385  Sum_probs=66.3

Q ss_pred             ccCCcCceeEeEecccccceEEEEEE----eCceeeEEeecCC-----CCHHHHHHHHHHHhcCCCCceeceeeEEEeC-
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKW----RGSIDVAMMKEGT-----MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKH-  494 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~----~~~~~v~~~k~~~-----~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~-  494 (513)
                      .+....|++.+.||+|+||.||+|.+    ..++..+++|...     ...+.+.+|+.+|++++||||+++++++... 
T Consensus        17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   96 (302)
T 4e5w_A           17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG   96 (302)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred             hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC
Confidence            45667799999999999999999985    3344555555322     2236789999999999999999999999876 


Q ss_pred             -CeeEEEEccCCCC
Q psy17476        495 -RPIYIVTDTSSFR  507 (513)
Q Consensus       495 -~~~~lV~E~~~~G  507 (513)
                       ..+++|||||++|
T Consensus        97 ~~~~~lv~e~~~~~  110 (302)
T 4e5w_A           97 GNGIKLIMEFLPSG  110 (302)
T ss_dssp             -CCEEEEEECCTTC
T ss_pred             CceEEEEEEeCCCC
Confidence             6789999999885

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=98.97  E-value=1e-09  Score=108.96  Aligned_cols=86  Identities=22%  Similarity=0.348  Sum_probs=62.1

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeCcee---eEEeecCCC------CHHHHHHHHHHHhcCCCCceeceeeEEE
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID---VAMMKEGTM------SEDDFIEEAKVMTRLQHQNLVQLYGVCS  492 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~---v~~~k~~~~------~~~~f~~E~~il~~l~HpNIV~l~g~~~  492 (513)
                      ..+.+..++|++.+.||+|+||.||+|.+.....   .+++|....      ..+.|.+|+++|++++|||||++++++.
T Consensus        16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   95 (323)
T 3qup_A           16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL   95 (323)
T ss_dssp             CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEE
T ss_pred             hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceee
Confidence            3456788899999999999999999999876542   344443221      1357999999999999999999999998


Q ss_pred             eCCee------EEEEccCCCC
Q psy17476        493 KHRPI------YIVTDTSSFR  507 (513)
Q Consensus       493 ~~~~~------~lV~E~~~~G  507 (513)
                      .....      ++|||||++|
T Consensus        96 ~~~~~~~~~~~~~v~e~~~~~  116 (323)
T 3qup_A           96 RSRAKGRLPIPMVILPFMKHG  116 (323)
T ss_dssp             CC-------CEEEEEECCTTC
T ss_pred             ccccccCCCccEEEEEeccCC
Confidence            77655      9999999986

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=98.97  E-value=7.3e-10  Score=107.46  Aligned_cols=79  Identities=19%  Similarity=0.229  Sum_probs=67.4

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      ++|++.+.||+|+||.||+|....++..+++|...       ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            57999999999999999999987666656555322       12357899999999999999999999999999999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      |||++|
T Consensus        91 e~~~~~   96 (278)
T 3cok_A           91 EMCHNG   96 (278)
T ss_dssp             ECCTTE
T ss_pred             ecCCCC
Confidence            999885

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.97  E-value=7.2e-10  Score=112.86  Aligned_cols=83  Identities=22%  Similarity=0.283  Sum_probs=62.0

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHH-HhcCCCCceeceeeEEEeCCee
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKV-MTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~i-l~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      +..++|++.+.||+|+||.||+++.+.++..+++|...       .....+.+|..+ ++.++|||||++++++.+.+.+
T Consensus        35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~  114 (373)
T 2r5t_A           35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL  114 (373)
T ss_dssp             CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence            45678999999999999999999998877766666321       122456778777 5778999999999999999999


Q ss_pred             EEEEccCCCCc
Q psy17476        498 YIVTDTSSFRL  508 (513)
Q Consensus       498 ~lV~E~~~~Gl  508 (513)
                      |||||||+||-
T Consensus       115 ~lv~E~~~gg~  125 (373)
T 2r5t_A          115 YFVLDYINGGE  125 (373)
T ss_dssp             EEEEECCCSCB
T ss_pred             EEEEeCCCCCc
Confidence            99999999863

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=98.96  E-value=1.3e-09  Score=106.48  Aligned_cols=86  Identities=27%  Similarity=0.516  Sum_probs=66.5

Q ss_pred             CCccccCCcCceeEe-EecccccceEEEEEEe--CceeeEEeecCCCC------HHHHHHHHHHHhcCCCCceeceeeEE
Q psy17476        421 HDKWEIDPAELMLLE-ELGSGQFGVVRRGKWR--GSIDVAMMKEGTMS------EDDFIEEAKVMTRLQHQNLVQLYGVC  491 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~-~lG~G~fG~V~~g~~~--~~~~v~~~k~~~~~------~~~f~~E~~il~~l~HpNIV~l~g~~  491 (513)
                      ...+.+...+|.+.+ .||+|+||.||+|.+.  .....+++|.....      .+.|.+|++++++++||||+++++++
T Consensus         8 ~~~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   87 (291)
T 1xbb_A            8 PKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC   87 (291)
T ss_dssp             ---CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cceeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            345677888999988 9999999999999764  33444555532211      35689999999999999999999999


Q ss_pred             EeCCeeEEEEccCCCC
Q psy17476        492 SKHRPIYIVTDTSSFR  507 (513)
Q Consensus       492 ~~~~~~~lV~E~~~~G  507 (513)
                       ..+..++||||+++|
T Consensus        88 -~~~~~~lv~e~~~~~  102 (291)
T 1xbb_A           88 -EAESWMLVMEMAELG  102 (291)
T ss_dssp             -ESSSEEEEEECCTTE
T ss_pred             -CCCCcEEEEEeCCCC
Confidence             566789999999975

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=98.96  E-value=2.9e-09  Score=97.90  Aligned_cols=108  Identities=25%  Similarity=0.576  Sum_probs=89.3

Q ss_pred             ceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccC--CCCCC---------------CCCCCCcEEEEeccCC
Q psy17476         73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKN--GIRKP---------------DQMIRPKVVVALYPFK  135 (513)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---------------~~~~~~~~~~~~~~~~  135 (513)
                      ....++++|.+....++++.+|+.|.+++..++|||.++...  |..+.               ........++++|+|.
T Consensus        12 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~~~~~~~~p~~~~~~~~al~dy~   91 (193)
T 1ng2_A           12 QTYRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKAYT   91 (193)
T ss_dssp             EEEECSSCBCCSSTTCCCBCTTCEEEEEECCTTSCCEEEECCCCCCCCGGGCCCSSCSSCSCCCCCCTTCEEEEESSCBC
T ss_pred             cEEEEcCCcCCCCCCcCCCCCCCEEEEEEecCCCeEEEEECCeeeEechheEEeeccccccchhhccccceeeeeccccC
Confidence            346788999999999999999999999999999999998422  21000               0111346799999999


Q ss_pred             CCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceeec
Q psy17476        136 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK  181 (513)
Q Consensus       136 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~  181 (513)
                      +...++|+|++||++.|++..++.||.++. .|..|++|.+|+...
T Consensus        92 a~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~-~g~~G~~P~~yv~~~  136 (193)
T 1ng2_A           92 AVEGDEVSLLEGEAVEVIHKLLDGWWVIRK-DDVTGYFPSMYLQKS  136 (193)
T ss_dssp             CCSTTBCCBCTTCEEEEEECCTTSEEEEEE-TTEEEEEEGGGEEET
T ss_pred             CCCCCcccccCCCEEEEEEecCCCeEEEEE-CCCEEEEehHHeEEC
Confidence            999999999999999999998899999884 789999999999764

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=98.96  E-value=1.2e-09  Score=106.45  Aligned_cols=80  Identities=25%  Similarity=0.478  Sum_probs=65.7

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-----CH------HHHHHHHHHHhcCCCCceeceeeEEEeC
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-----SE------DDFIEEAKVMTRLQHQNLVQLYGVCSKH  494 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-----~~------~~f~~E~~il~~l~HpNIV~l~g~~~~~  494 (513)
                      +..++|++.+.||+|+||.||+|.+..+...+++|....     ..      +.|.+|+.+|++++||||+++++++.+.
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   95 (287)
T 4f0f_A           16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP   95 (287)
T ss_dssp             CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred             hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence            456789999999999999999999987766666663221     11      5689999999999999999999998654


Q ss_pred             CeeEEEEccCCCC
Q psy17476        495 RPIYIVTDTSSFR  507 (513)
Q Consensus       495 ~~~~lV~E~~~~G  507 (513)
                      .  ++||||+++|
T Consensus        96 ~--~lv~e~~~~~  106 (287)
T 4f0f_A           96 P--RMVMEFVPCG  106 (287)
T ss_dssp             T--EEEEECCTTC
T ss_pred             C--eEEEEecCCC
Confidence            4  7999999965

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=98.96  E-value=1e-09  Score=109.27  Aligned_cols=83  Identities=30%  Similarity=0.429  Sum_probs=64.9

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEe-----CceeeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceeeEEEeC
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWR-----GSIDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKH  494 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~-----~~~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~  494 (513)
                      ++...+|++.+.||+|+||.||+|.+.     .+...+++|....  .   ...+.+|+.+|++++||||+++++++...
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  105 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS  105 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence            567789999999999999999999853     2334455553321  1   24689999999999999999999999999


Q ss_pred             CeeEEEEccCCCC
Q psy17476        495 RPIYIVTDTSSFR  507 (513)
Q Consensus       495 ~~~~lV~E~~~~G  507 (513)
                      ...|||||||++|
T Consensus       106 ~~~~lv~e~~~~~  118 (327)
T 2yfx_A          106 LPRFILMELMAGG  118 (327)
T ss_dssp             SSCEEEEECCTTE
T ss_pred             CCcEEEEecCCCC
Confidence            9999999999874

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=98.96  E-value=1.3e-09  Score=105.43  Aligned_cols=79  Identities=22%  Similarity=0.298  Sum_probs=66.9

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC-----CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-----MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-----~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      ++|++.+.||+|+||.||+|....+...+++|...     ...+.+.+|+.++++++||||+++++++.+.+..|+||||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            47899999999999999999988665555555321     1235789999999999999999999999999999999999


Q ss_pred             CCCC
Q psy17476        504 SSFR  507 (513)
Q Consensus       504 ~~~G  507 (513)
                      +++|
T Consensus        87 ~~~~   90 (276)
T 2yex_A           87 CSGG   90 (276)
T ss_dssp             CTTE
T ss_pred             cCCC
Confidence            9874

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=98.96  E-value=1.3e-09  Score=107.38  Aligned_cols=79  Identities=24%  Similarity=0.302  Sum_probs=66.1

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC----CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccC
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM----SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS  504 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~----~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~  504 (513)
                      ++|.+.+.||+|+||.||++....++..+++|....    ..+.+.+|+.+|++++||||+++++++......++|||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV   88 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence            578999999999999999999886666665553221    2356889999999999999999999999999999999999


Q ss_pred             CCC
Q psy17476        505 SFR  507 (513)
Q Consensus       505 ~~G  507 (513)
                      ++|
T Consensus        89 ~~~   91 (304)
T 2jam_A           89 SGG   91 (304)
T ss_dssp             CSC
T ss_pred             CCc
Confidence            875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=98.96  E-value=6.7e-10  Score=107.82  Aligned_cols=79  Identities=23%  Similarity=0.343  Sum_probs=66.7

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCCHHHHHHHHHHHhcCCCCceeceeeEEEe---------------
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSK---------------  493 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~---------------  493 (513)
                      .+|++.+.||+|+||.||++.+..++..+++|......+.+.+|+++|++++||||+++++++..               
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~   90 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS   90 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CC
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccccc
Confidence            46889999999999999999998666666666544455678899999999999999999999864               


Q ss_pred             -CCeeEEEEccCCCC
Q psy17476        494 -HRPIYIVTDTSSFR  507 (513)
Q Consensus       494 -~~~~~lV~E~~~~G  507 (513)
                       ...+++|||||++|
T Consensus        91 ~~~~~~lv~e~~~~~  105 (284)
T 2a19_B           91 KTKCLFIQMEFCDKG  105 (284)
T ss_dssp             EEEEEEEEECCCCSC
T ss_pred             CcceEEEEEeccCCC
Confidence             44589999999984

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=98.95  E-value=1.6e-09  Score=107.93  Aligned_cols=82  Identities=23%  Similarity=0.458  Sum_probs=66.1

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceee--EEeecCC-----CCHHHHHHHHHHHhcC-CCCceeceeeEEEeCCee
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDV--AMMKEGT-----MSEDDFIEEAKVMTRL-QHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v--~~~k~~~-----~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~  497 (513)
                      +..++|++.+.||+|+||.||+|....++..  +++|...     ...+.+.+|+++|+++ +||||+++++++.+.+.+
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~  101 (327)
T 1fvr_A           22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL  101 (327)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred             ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence            4557899999999999999999998765432  2333211     1234689999999999 999999999999999999


Q ss_pred             EEEEccCCCC
Q psy17476        498 YIVTDTSSFR  507 (513)
Q Consensus       498 ~lV~E~~~~G  507 (513)
                      |||||||++|
T Consensus       102 ~lv~e~~~~~  111 (327)
T 1fvr_A          102 YLAIEYAPHG  111 (327)
T ss_dssp             EEEECCCTTC
T ss_pred             EEEEecCCCC
Confidence            9999999875

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.95  E-value=6e-10  Score=112.05  Aligned_cols=82  Identities=22%  Similarity=0.339  Sum_probs=65.9

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC---------HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS---------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIY  498 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~---------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  498 (513)
                      ..+|++.+.||+|+||.||+|....++..+++|.....         .+.+.+|+.+|++++|||||++++++......+
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence            46799999999999999999999876666666633211         136889999999999999999999999999999


Q ss_pred             EEEccCCCCcc
Q psy17476        499 IVTDTSSFRLG  509 (513)
Q Consensus       499 lV~E~~~~Gl~  509 (513)
                      +|||||+++|.
T Consensus        89 lv~e~~~~~l~   99 (346)
T 1ua2_A           89 LVFDFMETDLE   99 (346)
T ss_dssp             EEEECCSEEHH
T ss_pred             EEEEcCCCCHH
Confidence            99999998773

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.94  E-value=1.9e-09  Score=109.19  Aligned_cols=87  Identities=15%  Similarity=0.248  Sum_probs=71.0

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEE-----EeCceeeEEee-cCCCCHHHHHHHHHHHhcCC---CCceeceeeEE
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGK-----WRGSIDVAMMK-EGTMSEDDFIEEAKVMTRLQ---HQNLVQLYGVC  491 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~-----~~~~~~v~~~k-~~~~~~~~f~~E~~il~~l~---HpNIV~l~g~~  491 (513)
                      ...+++..+.|.+.+.||+|+||.||+|.     .......+++| .......++.+|+++++.++   |+||+++++++
T Consensus        57 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~  136 (365)
T 3e7e_A           57 KTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAH  136 (365)
T ss_dssp             SCEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred             ceeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence            34677888999999999999999999995     33334445555 44445678999999999987   99999999999


Q ss_pred             EeCCeeEEEEccCCCC
Q psy17476        492 SKHRPIYIVTDTSSFR  507 (513)
Q Consensus       492 ~~~~~~~lV~E~~~~G  507 (513)
                      ...+..|||||||++|
T Consensus       137 ~~~~~~~lv~e~~~~g  152 (365)
T 3e7e_A          137 LFQNGSVLVGELYSYG  152 (365)
T ss_dssp             ECSSCEEEEECCCCSC
T ss_pred             ecCCCcEEEEeccCCC
Confidence            9999999999999976

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=98.94  E-value=1.2e-09  Score=105.92  Aligned_cols=79  Identities=23%  Similarity=0.307  Sum_probs=66.8

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC------CHHHHHHHHHHHhcC-CCCceeceeeEEEeCCeeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM------SEDDFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~------~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      ++|++.+.||+|+||.||+|....+...+++|....      ....+.+|+.++.++ +|||||++++++.+.+..+|||
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            578999999999999999999986666665553221      234688999999999 9999999999999999999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      |||++|
T Consensus        91 e~~~~~   96 (289)
T 1x8b_A           91 EYCNGG   96 (289)
T ss_dssp             ECCTTC
T ss_pred             EecCCC
Confidence            999884

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.94  E-value=2e-09  Score=104.97  Aligned_cols=80  Identities=21%  Similarity=0.344  Sum_probs=68.2

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeec------CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE------GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~------~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      .++|++.+.||+|+||.||+|....++..+++|.      .....+.+.+|++++++++||||+++++++......++||
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            3579999999999999999999876655555553      1234567999999999999999999999999999999999


Q ss_pred             ccCCCC
Q psy17476        502 DTSSFR  507 (513)
Q Consensus       502 E~~~~G  507 (513)
                      ||+++|
T Consensus       101 e~~~~~  106 (287)
T 2wei_A          101 ELYTGG  106 (287)
T ss_dssp             CCCCSC
T ss_pred             EccCCC
Confidence            999875

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.94  E-value=1.4e-09  Score=109.30  Aligned_cols=81  Identities=27%  Similarity=0.439  Sum_probs=67.1

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCC------CHHHHHHHHHHHhcCCCCceeceeeEEEeC-------
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKH-------  494 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~-------  494 (513)
                      ..+|++.+.||+|+||.||+|....++..+++|....      ....+.+|+.+|++++|||||++++++...       
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            3689999999999999999999977666666553211      134788999999999999999999999873       


Q ss_pred             -CeeEEEEccCCCCc
Q psy17476        495 -RPIYIVTDTSSFRL  508 (513)
Q Consensus       495 -~~~~lV~E~~~~Gl  508 (513)
                       ..+|||||||+++|
T Consensus        96 ~~~~~lv~e~~~~~l  110 (351)
T 3mi9_A           96 KGSIYLVFDFCEHDL  110 (351)
T ss_dssp             -CEEEEEEECCSEEH
T ss_pred             CceEEEEEeccCCCH
Confidence             46899999999876

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=98.94  E-value=1.8e-09  Score=106.75  Aligned_cols=80  Identities=16%  Similarity=0.125  Sum_probs=68.0

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC-------HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      ..+|++.+.||+|+||.||++....+...+++|.....       .+.+.+|+.++++++||||+++++++...+.+|+|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            46899999999999999999998876666666643221       25688999999999999999999999999999999


Q ss_pred             EccCCCC
Q psy17476        501 TDTSSFR  507 (513)
Q Consensus       501 ~E~~~~G  507 (513)
                      |||+++|
T Consensus       113 ~e~~~~~  119 (309)
T 2h34_A          113 MRLINGV  119 (309)
T ss_dssp             EECCCCE
T ss_pred             EEecCCC
Confidence            9999974

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.94  E-value=2e-09  Score=104.11  Aligned_cols=81  Identities=21%  Similarity=0.278  Sum_probs=68.4

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      ..++|.+.+.||+|+||.||+|....++..+++|...       ...+.+.+|+.++++++||||+++++++...+..++
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (276)
T 2h6d_A            9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM   88 (276)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence            4568999999999999999999998665556555321       224578899999999999999999999999999999


Q ss_pred             EEccCCCC
Q psy17476        500 VTDTSSFR  507 (513)
Q Consensus       500 V~E~~~~G  507 (513)
                      ||||+++|
T Consensus        89 v~e~~~~~   96 (276)
T 2h6d_A           89 VMEYVSGG   96 (276)
T ss_dssp             EEECCCSC
T ss_pred             EEeccCCC
Confidence            99999874

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens}

Probab=98.94  E-value=1.8e-09  Score=90.45  Aligned_cols=80  Identities=30%  Similarity=0.579  Sum_probs=62.9

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|..|+++|.   ++|+||||+|++ ++.|+||++.                                    
T Consensus        17 ~~WyhG~isR~eAe~lL~---~~G~FLVR~S~~~~g~y~LSv~~------------------------------------   57 (116)
T 2kk6_A           17 QDWYHGAIPRIEAQELLK---KQGDFLVRESHGKPGEYVLSVYS------------------------------------   57 (116)
T ss_dssp             CTTEEESCCHHHHHHTCC---STTCEEEEECTTCTTCEEEEEEE------------------------------------
T ss_pred             CCCccCCCCHHHHHHHhc---cCCcEEEEECCCCCCcEEEEEEE------------------------------------
Confidence            469999999999999997   589999999976 6789888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGL  400 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~  400 (513)
                                               .+.++|++|.. .+|.|.+ +...|.++.+||++|.....++
T Consensus        58 -------------------------~~~v~H~~I~~-~~g~y~~-~~~~F~sl~eLV~~y~~~~~~i   97 (116)
T 2kk6_A           58 -------------------------DGQRRHFIIQY-VDNMYRF-EGTGFSNIPQLIDHHYTTKQVI   97 (116)
T ss_dssp             -------------------------TTEEEEEEEEE-ETTEEES-SSCEESCHHHHHHHHHHTTCCS
T ss_pred             -------------------------CCeEEEEEEEe-cCCEEEE-CCCEeCCHHHHHHHHhhCCCCc
Confidence                                     24556666654 3444554 4678999999999999876544

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.94  E-value=2.9e-09  Score=103.86  Aligned_cols=84  Identities=27%  Similarity=0.496  Sum_probs=66.3

Q ss_pred             ccccCCcCceeEe-EecccccceEEEEEEeC--ceeeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceeeEEEeC
Q psy17476        423 KWEIDPAELMLLE-ELGSGQFGVVRRGKWRG--SIDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKH  494 (513)
Q Consensus       423 ~~~~~~~~~~~~~-~lG~G~fG~V~~g~~~~--~~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~  494 (513)
                      .|.+..++|.+.+ .||+|+||.||+|.+..  ....+++|....  .   .+.+.+|+++|++++||||+++++++. .
T Consensus         3 ~~~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~   81 (287)
T 1u59_A            3 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-A   81 (287)
T ss_dssp             CCBCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-S
T ss_pred             cccccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-C
Confidence            5677888888887 99999999999998642  333344443222  1   346899999999999999999999994 5


Q ss_pred             CeeEEEEccCCCC
Q psy17476        495 RPIYIVTDTSSFR  507 (513)
Q Consensus       495 ~~~~lV~E~~~~G  507 (513)
                      +..++||||+++|
T Consensus        82 ~~~~lv~e~~~~~   94 (287)
T 1u59_A           82 EALMLVMEMAGGG   94 (287)
T ss_dssp             SSEEEEEECCTTE
T ss_pred             CCcEEEEEeCCCC
Confidence            6789999999985

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.94  E-value=7.4e-10  Score=116.15  Aligned_cols=80  Identities=20%  Similarity=0.251  Sum_probs=66.5

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC------CHHHHHHHHHHHhcCCCCceeceeeEEEeC------Ce
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKH------RP  496 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~------~~  496 (513)
                      ++|++.+.||+|+||.||++....++..+++|....      ..+.+.+|+.+|+.++|||||++++++...      ..
T Consensus        62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~  141 (464)
T 3ttj_A           62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD  141 (464)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence            579999999999999999999887666666553322      134688999999999999999999999654      35


Q ss_pred             eEEEEccCCCCc
Q psy17476        497 IYIVTDTSSFRL  508 (513)
Q Consensus       497 ~~lV~E~~~~Gl  508 (513)
                      +|||||||++||
T Consensus       142 ~~lv~E~~~~~l  153 (464)
T 3ttj_A          142 VYLVMELMDANL  153 (464)
T ss_dssp             EEEEEECCSEEH
T ss_pred             EEEEEeCCCCCH
Confidence            799999999987

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.94  E-value=4.3e-10  Score=110.54  Aligned_cols=81  Identities=21%  Similarity=0.342  Sum_probs=65.3

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC--------CCHHHHHHHHHHHhcCCCCceeceeeEEE--eCCeeE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT--------MSEDDFIEEAKVMTRLQHQNLVQLYGVCS--KHRPIY  498 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~--------~~~~~f~~E~~il~~l~HpNIV~l~g~~~--~~~~~~  498 (513)
                      .+|.+.+.||+|+||.||++....++..+++|...        ...+.+.+|+.+|++++||||+++++++.  +....+
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            47888999999999999999987766666555322        22356899999999999999999999984  445789


Q ss_pred             EEEccCCCCcc
Q psy17476        499 IVTDTSSFRLG  509 (513)
Q Consensus       499 lV~E~~~~Gl~  509 (513)
                      ||||||++||.
T Consensus        85 lv~e~~~~~l~   95 (305)
T 2wtk_C           85 MVMEYCVCGMQ   95 (305)
T ss_dssp             EEEECCSEEHH
T ss_pred             EEehhccCCHH
Confidence            99999999863

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.93  E-value=1.3e-09  Score=112.83  Aligned_cols=79  Identities=18%  Similarity=0.251  Sum_probs=64.3

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCC------------CHHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM------------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~------------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      .++|.+.+.||+|+||.||+|....+...+++|....            ....+.+|+.+|++++|||||++++++.. +
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~  212 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-E  212 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-S
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-C
Confidence            4679999999999999999999987766666553111            11248899999999999999999999864 5


Q ss_pred             eeEEEEccCCCC
Q psy17476        496 PIYIVTDTSSFR  507 (513)
Q Consensus       496 ~~~lV~E~~~~G  507 (513)
                      ..|||||||++|
T Consensus       213 ~~~lv~e~~~~g  224 (419)
T 3i6u_A          213 DYYIVLELMEGG  224 (419)
T ss_dssp             EEEEEEECCTTC
T ss_pred             ceEEEEEcCCCC
Confidence            689999999986

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=98.93  E-value=1.9e-09  Score=104.41  Aligned_cols=80  Identities=20%  Similarity=0.401  Sum_probs=66.1

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCC---CC---HHHHHHHHHHHhcCCCCceeceeeEEEe--CCeeEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT---MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSK--HRPIYI  499 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~---~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~--~~~~~l  499 (513)
                      .++|++.+.||+|+||.||++....++..+++|...   ..   .+.+.+|+.+|++++||||+++++++..  ...+++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            358999999999999999999998766666655322   22   2468899999999999999999998864  568999


Q ss_pred             EEccCCCC
Q psy17476        500 VTDTSSFR  507 (513)
Q Consensus       500 V~E~~~~G  507 (513)
                      ||||+++|
T Consensus        85 v~e~~~~~   92 (279)
T 2w5a_A           85 VMEYCEGG   92 (279)
T ss_dssp             EEECCTTE
T ss_pred             EEeCCCCC
Confidence            99999974

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=98.93  E-value=1e-09  Score=108.58  Aligned_cols=86  Identities=16%  Similarity=0.219  Sum_probs=68.7

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-C---CHHHHHHHHHHHhcCCCCceeceeeEEEe----
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-M---SEDDFIEEAKVMTRLQHQNLVQLYGVCSK----  493 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-~---~~~~f~~E~~il~~l~HpNIV~l~g~~~~----  493 (513)
                      ..+.+...+|++.+.||+|+||.||++....++..+++|... .   ..+.+.+|+.++++++|||||++++++..    
T Consensus        22 ~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  101 (317)
T 2buj_A           22 HMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGA  101 (317)
T ss_dssp             EEEEETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETT
T ss_pred             cEEEECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCC
Confidence            456778889999999999999999999987666666655321 1   23568999999999999999999999973    


Q ss_pred             CCeeEEEEccCCCC
Q psy17476        494 HRPIYIVTDTSSFR  507 (513)
Q Consensus       494 ~~~~~lV~E~~~~G  507 (513)
                      ....++|||||++|
T Consensus       102 ~~~~~lv~e~~~~~  115 (317)
T 2buj_A          102 KHEAWLLLPFFKRG  115 (317)
T ss_dssp             EEEEEEEEECCTTC
T ss_pred             CceeEEEEEeCCCC
Confidence            34789999999985

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.93  E-value=9.2e-10  Score=111.80  Aligned_cols=88  Identities=23%  Similarity=0.339  Sum_probs=63.1

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC---C---HHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM---S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~---~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      ..|++. ..|++.+.||+|+||.||+|....++..+++|....   .   .+.+.+|+++|++++|||||++++++....
T Consensus        19 ~~~~~~-~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~   97 (367)
T 1cm8_A           19 TAWEVR-AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDE   97 (367)
T ss_dssp             SEECCB-SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCS
T ss_pred             ceeeec-ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCC
Confidence            345553 679999999999999999999977666666653321   1   246889999999999999999999997653


Q ss_pred             ------eeEEEEccCCCCccc
Q psy17476        496 ------PIYIVTDTSSFRLGL  510 (513)
Q Consensus       496 ------~~~lV~E~~~~Gl~~  510 (513)
                            .+|||||||.+.|..
T Consensus        98 ~~~~~~~~~lv~e~~~~~L~~  118 (367)
T 1cm8_A           98 TLDDFTDFYLVMPFMGTDLGK  118 (367)
T ss_dssp             STTTCCCCEEEEECCSEEHHH
T ss_pred             ccccCceEEEEEecCCCCHHH
Confidence                  469999999665543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=98.93  E-value=2.1e-09  Score=106.01  Aligned_cols=80  Identities=23%  Similarity=0.329  Sum_probs=65.2

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCC----CC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT----MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~----~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      ..+|++.+.||+|+||.||+|....++..+++|...    ..   .+.+.+|+.+|++++||||+++++++...+..++|
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            457999999999999999999987655555555322    12   24688999999999999999999999999999999


Q ss_pred             EccCCCC
Q psy17476        501 TDTSSFR  507 (513)
Q Consensus       501 ~E~~~~G  507 (513)
                      |||+++|
T Consensus       111 ~e~~~~~  117 (310)
T 2wqm_A          111 LELADAG  117 (310)
T ss_dssp             EECCCSC
T ss_pred             EecCCCC
Confidence            9999985

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.93  E-value=4e-10  Score=117.89  Aligned_cols=87  Identities=17%  Similarity=0.342  Sum_probs=61.2

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC---C---HHHHHHHHHHHhcCCCCceeceeeEEEeC--
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM---S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKH--  494 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~---~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~--  494 (513)
                      .|++. ++|.+.+.||+|+||.||+|..+.++..+++|....   .   .+.+.+|+.+|++++|||||++++++...  
T Consensus        48 ~~~~~-~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  126 (458)
T 3rp9_A           48 DWQIP-DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDV  126 (458)
T ss_dssp             SCCSC-TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCT
T ss_pred             cCccC-CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCc
Confidence            34444 679999999999999999999887766666663222   1   24688999999999999999999999543  


Q ss_pred             ---CeeEEEEccCCCCccc
Q psy17476        495 ---RPIYIVTDTSSFRLGL  510 (513)
Q Consensus       495 ---~~~~lV~E~~~~Gl~~  510 (513)
                         ..+|||||||.++|..
T Consensus       127 ~~~~~~~lv~e~~~~~L~~  145 (458)
T 3rp9_A          127 EKFDELYVVLEIADSDFKK  145 (458)
T ss_dssp             TTCCCEEEEECCCSEEHHH
T ss_pred             ccCceEEEEEeccccchhh
Confidence               5699999999987743

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=98.93  E-value=1.8e-09  Score=104.85  Aligned_cols=85  Identities=25%  Similarity=0.485  Sum_probs=68.2

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeCc---eeeEEeecCCCC-----HHHHHHHHHHHhcCCCCceeceeeEEEe
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGS---IDVAMMKEGTMS-----EDDFIEEAKVMTRLQHQNLVQLYGVCSK  493 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~---~~v~~~k~~~~~-----~~~f~~E~~il~~l~HpNIV~l~g~~~~  493 (513)
                      ..|.+..++|.+.+.||+|+||.||+|.+...   ...+++|.....     .+.|.+|+.+|++++||||+++++++.+
T Consensus         5 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   84 (281)
T 3cc6_A            5 PQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE   84 (281)
T ss_dssp             CCCSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS
T ss_pred             ccceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC
Confidence            45677889999999999999999999987642   233555533321     3568999999999999999999999875


Q ss_pred             CCeeEEEEccCCCC
Q psy17476        494 HRPIYIVTDTSSFR  507 (513)
Q Consensus       494 ~~~~~lV~E~~~~G  507 (513)
                       +..++||||+++|
T Consensus        85 -~~~~~v~e~~~~~   97 (281)
T 3cc6_A           85 -EPTWIIMELYPYG   97 (281)
T ss_dssp             -SSCEEEEECCTTC
T ss_pred             -CCCEEEEecCCCC
Confidence             4579999999975

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens}

Probab=98.93  E-value=2.4e-09  Score=93.18  Aligned_cols=88  Identities=28%  Similarity=0.462  Sum_probs=70.4

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      ..|+++.++|.+|+++|.. .++|.||||++++ .+.|+||++.                                    
T Consensus        24 ~~WyhG~isR~eAe~lL~~-~~~G~FLVR~S~~~~~~~~LSv~~------------------------------------   66 (141)
T 2vif_A           24 QGWYWGPITRWEAEGKLAN-VPDGSFLVRDSSDDRYLLSLSFRS------------------------------------   66 (141)
T ss_dssp             HTCBCCSCCHHHHHHHTTT-SCTTCEEEEECSSTTCSEEEEEEE------------------------------------
T ss_pred             CCCcccCCCHHHHHHHhcC-CCCceEEEEecCCCCCCEEEEEEE------------------------------------
Confidence            3599999999999999975 5789999999976 6788888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEe---cCcccCChhhhhhcccccC-CCCccccC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLS---EKHCCHSIPEVVNYHRHNS-GGLASRLK  405 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~---~~~~F~sl~eLi~~~~~~~-~~~~~~~~  405 (513)
                                               .+.++|++|... +|.|++.   ....|.++.+||+||.... +++.+.+.
T Consensus        67 -------------------------~~~v~H~~I~~~-~g~~~l~~~~~~~~F~sl~eLI~~y~~~~~~gl~c~l~  116 (141)
T 2vif_A           67 -------------------------HGKTLHTRIEHS-NGRFSFYEQPDVEGHTSIVDLIEHSIGDSENGAFCYSR  116 (141)
T ss_dssp             -------------------------TTEEEEEEEEEE-TTEEEETTCCSCCCBSSHHHHHHHHHHHHHHTCCEEES
T ss_pred             -------------------------CCEEEEEEEEEE-CCEEEEeecCCCCccCCHHHHHHHHhhCCCCCcceecc
Confidence                                     245667777665 6677777   5788999999999999887 56665543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=98.93  E-value=7.6e-10  Score=109.47  Aligned_cols=80  Identities=23%  Similarity=0.172  Sum_probs=65.2

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCC----C---HHHHHHHHHHHhcCCCCceeceeeEEEeCCe----
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM----S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP----  496 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~----~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~----  496 (513)
                      .++|++.+.||+|+||.||++....++..+++|....    .   ...|.+|+.++++++|||||++++++.....    
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            4679999999999999999999877666666663222    1   1368899999999999999999999977543    


Q ss_pred             eEEEEccCCCC
Q psy17476        497 IYIVTDTSSFR  507 (513)
Q Consensus       497 ~~lV~E~~~~G  507 (513)
                      .|||||||+||
T Consensus        91 ~~lv~e~~~g~  101 (311)
T 3ork_A           91 PYIVMEYVDGV  101 (311)
T ss_dssp             EEEEEECCCEE
T ss_pred             cEEEEecCCCC
Confidence            49999999875

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=98.92  E-value=1.1e-09  Score=108.16  Aligned_cols=79  Identities=37%  Similarity=0.667  Sum_probs=64.1

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccC
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS  504 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~  504 (513)
                      +..++|++.+.||+|+||.||++.+.+ ..+++++.... ..+.|.+|+++|++++|||||++++++.  +..+||||||
T Consensus         5 i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~   81 (307)
T 2eva_A            5 IDYKEIEVEEVVGRGAFGVVCKAKWRA-KDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA   81 (307)
T ss_dssp             CCGGGEEEEEEEECCSSSEEEEEEETT-EEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred             CCHhHeeeeeEeecCCCceEEEEEECC-eeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence            456789999999999999999998864 34444443322 2457999999999999999999999886  4589999999


Q ss_pred             CCC
Q psy17476        505 SFR  507 (513)
Q Consensus       505 ~~G  507 (513)
                      ++|
T Consensus        82 ~~~   84 (307)
T 2eva_A           82 EGG   84 (307)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            885

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.92  E-value=2.8e-09  Score=105.83  Aligned_cols=86  Identities=20%  Similarity=0.377  Sum_probs=70.6

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeCceeeEEeec---CCCCHHHHHHHHHHHhcC-CCCceeceeeEEEe----
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE---GTMSEDDFIEEAKVMTRL-QHQNLVQLYGVCSK----  493 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~---~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~----  493 (513)
                      ..+......|++.+.||+|+||.||+|.+..++..+++|.   .....+.+.+|+.+++++ +||||+++++++..    
T Consensus        17 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~   96 (326)
T 2x7f_A           17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP   96 (326)
T ss_dssp             CCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred             hhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence            3445567889999999999999999999976666665553   223456799999999999 89999999999987    


Q ss_pred             --CCeeEEEEccCCCC
Q psy17476        494 --HRPIYIVTDTSSFR  507 (513)
Q Consensus       494 --~~~~~lV~E~~~~G  507 (513)
                        ...++||||||++|
T Consensus        97 ~~~~~~~lv~e~~~~~  112 (326)
T 2x7f_A           97 GMDDQLWLVMEFCGAG  112 (326)
T ss_dssp             CCCCEEEEEEECCTTE
T ss_pred             cccceEEEEEEcCCCC
Confidence              46799999999984

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.92  E-value=2.5e-09  Score=105.75  Aligned_cols=79  Identities=15%  Similarity=0.130  Sum_probs=65.0

Q ss_pred             cCceeE-eEecccccceEEEEEEeCceeeEEeecC----CCCHHHHHHHHHHHhcC-CCCceeceeeEEEeCCeeEEEEc
Q psy17476        429 AELMLL-EELGSGQFGVVRRGKWRGSIDVAMMKEG----TMSEDDFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       429 ~~~~~~-~~lG~G~fG~V~~g~~~~~~~v~~~k~~----~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      +.|.+. +.||+|+||.||+|....++..+++|..    ....+.+.+|+++|.++ +||||+++++++.+.+.+|||||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            467774 6899999999999998766665555532    22356799999999985 79999999999999999999999


Q ss_pred             cCCCC
Q psy17476        503 TSSFR  507 (513)
Q Consensus       503 ~~~~G  507 (513)
                      ||++|
T Consensus        92 ~~~~~   96 (316)
T 2ac3_A           92 KMRGG   96 (316)
T ss_dssp             CCTTC
T ss_pred             cCCCC
Confidence            99975

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.92  E-value=2.2e-09  Score=105.15  Aligned_cols=80  Identities=21%  Similarity=0.250  Sum_probs=67.2

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCC------C-------HHHHHHHHHHHhcCC-CCceeceeeEEEe
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM------S-------EDDFIEEAKVMTRLQ-HQNLVQLYGVCSK  493 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~------~-------~~~f~~E~~il~~l~-HpNIV~l~g~~~~  493 (513)
                      .++|.+.+.||+|+||.||+|....++..+++|....      .       .+.+.+|+++|+++. ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            4689999999999999999999987766666663211      1       235789999999995 9999999999999


Q ss_pred             CCeeEEEEccCCCC
Q psy17476        494 HRPIYIVTDTSSFR  507 (513)
Q Consensus       494 ~~~~~lV~E~~~~G  507 (513)
                      ....++||||+++|
T Consensus        96 ~~~~~lv~e~~~~~  109 (298)
T 1phk_A           96 NTFFFLVFDLMKKG  109 (298)
T ss_dssp             SSEEEEEEECCTTC
T ss_pred             CCeEEEEEeccCCC
Confidence            99999999999975

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.92  E-value=1e-09  Score=113.96  Aligned_cols=82  Identities=17%  Similarity=0.321  Sum_probs=68.4

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC---C---HHHHHHHHHHHhcCCCCceeceeeEEEeC-----Cee
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM---S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKH-----RPI  497 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~---~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~-----~~~  497 (513)
                      ++|.+.+.||+|+||.||+|....++..+++|....   .   .+.+.+|+.+|++++|||||++++++...     ..+
T Consensus        26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~  105 (432)
T 3n9x_A           26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL  105 (432)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence            679999999999999999999987766666663322   1   24689999999999999999999999776     569


Q ss_pred             EEEEccCCCCccc
Q psy17476        498 YIVTDTSSFRLGL  510 (513)
Q Consensus       498 ~lV~E~~~~Gl~~  510 (513)
                      |||||||.+.|..
T Consensus       106 ~lv~e~~~~~L~~  118 (432)
T 3n9x_A          106 YIVLEIADSDLKK  118 (432)
T ss_dssp             EEEEECCSEEHHH
T ss_pred             EEEEecCCcCHHH
Confidence            9999999987743

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.92  E-value=8.8e-10  Score=109.94  Aligned_cols=83  Identities=17%  Similarity=0.152  Sum_probs=68.3

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecC--CCCHHHHHHHHHHHhcC-CCCceeceeeEEEeCCeeEEEEccC
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG--TMSEDDFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTDTS  504 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~--~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV~E~~  504 (513)
                      ..+|++.+.||+|+||.||+|....++..+++|..  ....+.+.+|+++|+++ +||||+++++++......+||||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~   87 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL   87 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence            36799999999999999999998776666666632  22334689999999999 9999999999999999999999999


Q ss_pred             CCCccc
Q psy17476        505 SFRLGL  510 (513)
Q Consensus       505 ~~Gl~~  510 (513)
                      .+.|..
T Consensus        88 ~~~L~~   93 (330)
T 2izr_A           88 GPSLED   93 (330)
T ss_dssp             CCBHHH
T ss_pred             CCCHHH
Confidence            555543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.91  E-value=1.5e-09  Score=108.82  Aligned_cols=82  Identities=15%  Similarity=0.233  Sum_probs=66.5

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-----C----------------HHHHHHHHHHHhcCCCCcee
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-----S----------------EDDFIEEAKVMTRLQHQNLV  485 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-----~----------------~~~f~~E~~il~~l~HpNIV  485 (513)
                      ...+|.+.+.||+|+||.||+|.. .. ..+++|....     .                .+.|.+|+.+|++++||||+
T Consensus        29 ~~~~y~~~~~lg~G~~g~V~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~  106 (348)
T 2pml_X           29 YINDYRIIRTLNQGKFNKIILCEK-DN-KFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCL  106 (348)
T ss_dssp             EETTEEEEEEEECCSSCCEEEEEE-TT-EEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBC
T ss_pred             ccCceEEEEEEcCCCCeEEEEEEc-CC-ceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcc
Confidence            346899999999999999999998 43 4444442110     0                17799999999999999999


Q ss_pred             ceeeEEEeCCeeEEEEccCCCC-ccc
Q psy17476        486 QLYGVCSKHRPIYIVTDTSSFR-LGL  510 (513)
Q Consensus       486 ~l~g~~~~~~~~~lV~E~~~~G-l~~  510 (513)
                      ++++++.+.+..++|||||++| |..
T Consensus       107 ~~~~~~~~~~~~~lv~e~~~~~~L~~  132 (348)
T 2pml_X          107 TCEGIITNYDEVYIIYEYMENDSILK  132 (348)
T ss_dssp             CCSEEEESSSEEEEEEECCTTCBSSE
T ss_pred             eEEEEEeeCCeEEEEEeccCCCcHHH
Confidence            9999999999999999999984 443

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.91  E-value=4.4e-10  Score=116.34  Aligned_cols=82  Identities=22%  Similarity=0.212  Sum_probs=65.2

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCCCHHHHHHHHHHHhcCCCCceeceeeEEEeC------CeeEEEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKH------RPIYIVT  501 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~------~~~~lV~  501 (513)
                      ...|.+.+.||+|+||.||+|.+..++..+++|........+.+|+++|++++|||||+++++|...      ..++|||
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~  132 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL  132 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeeh
Confidence            3468899999999999999999987666666664333334455799999999999999999998542      2478999


Q ss_pred             ccCCCCcc
Q psy17476        502 DTSSFRLG  509 (513)
Q Consensus       502 E~~~~Gl~  509 (513)
                      |||++++.
T Consensus       133 e~~~~~l~  140 (420)
T 1j1b_A          133 DYVPETVY  140 (420)
T ss_dssp             ECCCEEHH
T ss_pred             hcccccHH
Confidence            99998763

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.91  E-value=1.8e-09  Score=107.17  Aligned_cols=78  Identities=19%  Similarity=0.259  Sum_probs=63.8

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC------------HHHHHHHHHHHhcCCCCceeceeeEEEeCCe
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS------------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~------------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  496 (513)
                      ++|.+.+.||+|+||.||+|....++..+++|.....            ...+.+|+++|++++||||+++++++..+. 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            5789999999999999999999877666666632211            124889999999999999999999997655 


Q ss_pred             eEEEEccCCCC
Q psy17476        497 IYIVTDTSSFR  507 (513)
Q Consensus       497 ~~lV~E~~~~G  507 (513)
                      .|+|||||++|
T Consensus        89 ~~lv~e~~~~~   99 (322)
T 2ycf_A           89 YYIVLELMEGG   99 (322)
T ss_dssp             EEEEEECCTTE
T ss_pred             eEEEEecCCCC
Confidence            89999999885

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=98.91  E-value=1.6e-09  Score=107.01  Aligned_cols=87  Identities=28%  Similarity=0.513  Sum_probs=69.8

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeC-----ceeeEEeecCCC--C---HHHHHHHHHHHhcC-CCCceeceee
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVAMMKEGTM--S---EDDFIEEAKVMTRL-QHQNLVQLYG  489 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-----~~~v~~~k~~~~--~---~~~f~~E~~il~~l-~HpNIV~l~g  489 (513)
                      ...|++..++|.+.+.||+|+||.||+|.+..     +...+++|....  .   .+.+.+|+.+|+++ +||||+++++
T Consensus        19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~   98 (316)
T 2xir_A           19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG   98 (316)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence            34788899999999999999999999998642     344555553222  2   24688999999999 7999999999


Q ss_pred             EEEeCC-eeEEEEccCCCC
Q psy17476        490 VCSKHR-PIYIVTDTSSFR  507 (513)
Q Consensus       490 ~~~~~~-~~~lV~E~~~~G  507 (513)
                      ++...+ .+++|||||++|
T Consensus        99 ~~~~~~~~~~lv~e~~~~~  117 (316)
T 2xir_A           99 ACTKPGGPLMVIVEFCKFG  117 (316)
T ss_dssp             EECCTTSCCEEEEECCTTE
T ss_pred             EEecCCCceEEEEEcCCCC
Confidence            997754 599999999974

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.90  E-value=4e-10  Score=111.59  Aligned_cols=88  Identities=25%  Similarity=0.494  Sum_probs=72.6

Q ss_pred             CCCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCC---CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCe
Q psy17476        420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT---MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       420 ~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~---~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  496 (513)
                      ....|++..++|++.+.||+|+||.||+|.+.+...+++++...   ...+.|.+|+.++++++||||+++++++...+.
T Consensus        24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~  103 (319)
T 2y4i_B           24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH  103 (319)
T ss_dssp             CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred             ccccccCCHHHeEEeeEeccCCceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence            35688999999999999999999999999987653333333221   123467889999999999999999999999999


Q ss_pred             eEEEEccCCCC
Q psy17476        497 IYIVTDTSSFR  507 (513)
Q Consensus       497 ~~lV~E~~~~G  507 (513)
                      +++|||||++|
T Consensus       104 ~~iv~e~~~~~  114 (319)
T 2y4i_B          104 LAIITSLCKGR  114 (319)
T ss_dssp             EEEECBCCCSE
T ss_pred             eEEEeecccCC
Confidence            99999999875

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.90  E-value=1.2e-09  Score=108.94  Aligned_cols=73  Identities=21%  Similarity=0.259  Sum_probs=63.0

Q ss_pred             eEecccccceEEEEEEeCceeeEEeecCC-CCHHHHHHHHHHHhcCC-CCceeceeeEEEeCCeeEEEEccCCCC
Q psy17476        435 EELGSGQFGVVRRGKWRGSIDVAMMKEGT-MSEDDFIEEAKVMTRLQ-HQNLVQLYGVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       435 ~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-~~~~~f~~E~~il~~l~-HpNIV~l~g~~~~~~~~~lV~E~~~~G  507 (513)
                      +.||+|+||.||+|....++..+++|... .....+.+|+.+|+.+. |||||++++++.+....|||||||++|
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~   91 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG   91 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence            67999999999999998776666666433 33467889999999997 999999999999999999999999985

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=98.90  E-value=2.8e-09  Score=107.55  Aligned_cols=87  Identities=16%  Similarity=0.173  Sum_probs=72.4

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC---HHHHHHHHHHHhcCC-----CCceeceeeEEEeC
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS---EDDFIEEAKVMTRLQ-----HQNLVQLYGVCSKH  494 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~---~~~f~~E~~il~~l~-----HpNIV~l~g~~~~~  494 (513)
                      ...+-.++|.+.+.||+|+||.||+|.+..++..+++|.....   ...+..|+.+|+.++     |||||++++++...
T Consensus        29 ~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~  108 (360)
T 3llt_A           29 KGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYY  108 (360)
T ss_dssp             TTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEET
T ss_pred             cceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeEC
Confidence            3345567899999999999999999999877777777754432   346788999999996     99999999999999


Q ss_pred             CeeEEEEccCCCCcc
Q psy17476        495 RPIYIVTDTSSFRLG  509 (513)
Q Consensus       495 ~~~~lV~E~~~~Gl~  509 (513)
                      +.++||||||.+.|.
T Consensus       109 ~~~~lv~e~~~~~L~  123 (360)
T 3llt_A          109 DHMCLIFEPLGPSLY  123 (360)
T ss_dssp             TEEEEEECCCCCBHH
T ss_pred             CeeEEEEcCCCCCHH
Confidence            999999999966663

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=98.90  E-value=1.9e-09  Score=109.60  Aligned_cols=81  Identities=21%  Similarity=0.252  Sum_probs=66.7

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC---CC---HHHHHHHHHHHhcCCCCceeceeeEEEeCC------e
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT---MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR------P  496 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~---~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~------~  496 (513)
                      .+|++.+.||+|+||.||+|....++..+++|...   ..   .+.+.+|+.+|+.++|||||++++++....      .
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~  104 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  104 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence            57999999999999999999987766656555322   12   246889999999999999999999997654      7


Q ss_pred             eEEEEccCCCCcc
Q psy17476        497 IYIVTDTSSFRLG  509 (513)
Q Consensus       497 ~~lV~E~~~~Gl~  509 (513)
                      +|||||||+++|.
T Consensus       105 ~~lv~e~~~~~l~  117 (371)
T 2xrw_A          105 VYIVMELMDANLC  117 (371)
T ss_dssp             EEEEEECCSEEHH
T ss_pred             eEEEEEcCCCCHH
Confidence            8999999998873

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=98.90  E-value=2.1e-09  Score=104.90  Aligned_cols=80  Identities=26%  Similarity=0.323  Sum_probs=64.6

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecC---CCC---HHHHHHHHHHHhcCCCCceeceeeEEEe----CCee
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG---TMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSK----HRPI  497 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~---~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~----~~~~  497 (513)
                      ...|.+.+.||+|+||.||+|....+...+++|..   ...   .+.+.+|+.+|++++|||||++++++..    ...+
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  104 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI  104 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence            34588889999999999999998876665555421   112   2468999999999999999999999875    3568


Q ss_pred             EEEEccCCCC
Q psy17476        498 YIVTDTSSFR  507 (513)
Q Consensus       498 ~lV~E~~~~G  507 (513)
                      ++|||||++|
T Consensus       105 ~lv~e~~~~~  114 (290)
T 1t4h_A          105 VLVTELMTSG  114 (290)
T ss_dssp             EEEEECCCSC
T ss_pred             EEEEEecCCC
Confidence            9999999885

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.90  E-value=3e-09  Score=105.80  Aligned_cols=81  Identities=16%  Similarity=0.240  Sum_probs=69.4

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeec-CCCCHHHHHHHHHHHhcCC-CCceeceeeEEEe--CCeeEEEEcc
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE-GTMSEDDFIEEAKVMTRLQ-HQNLVQLYGVCSK--HRPIYIVTDT  503 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~-~~~~~~~f~~E~~il~~l~-HpNIV~l~g~~~~--~~~~~lV~E~  503 (513)
                      .++|++.+.||+|+||.||+|....++..+++|. .....+.+.+|+.+|++++ ||||+++++++..  ....++||||
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~  114 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH  114 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEec
Confidence            4679999999999999999999877666666664 3445678999999999997 9999999999987  5678999999


Q ss_pred             CCCCc
Q psy17476        504 SSFRL  508 (513)
Q Consensus       504 ~~~Gl  508 (513)
                      |++|.
T Consensus       115 ~~~~~  119 (330)
T 3nsz_A          115 VNNTD  119 (330)
T ss_dssp             CCCCC
T ss_pred             cCchh
Confidence            99874

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.90  E-value=7.7e-10  Score=110.89  Aligned_cols=80  Identities=18%  Similarity=0.263  Sum_probs=67.5

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC------------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCe
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM------------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~------------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  496 (513)
                      .+|++.+.||+|+||.||+|....++..+++|....            ..+.+.+|+.+|++++|||||++++++.+.+.
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF  103 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence            578999999999999999999887766666653211            12357889999999999999999999999999


Q ss_pred             eEEEEccCCCCc
Q psy17476        497 IYIVTDTSSFRL  508 (513)
Q Consensus       497 ~~lV~E~~~~Gl  508 (513)
                      +++||||+.+|+
T Consensus       104 ~~lv~e~~~~g~  115 (335)
T 3dls_A          104 FQLVMEKHGSGL  115 (335)
T ss_dssp             EEEEEECCTTSC
T ss_pred             EEEEEEeCCCCc
Confidence            999999998875

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=98.90  E-value=1.6e-09  Score=107.03  Aligned_cols=82  Identities=23%  Similarity=0.338  Sum_probs=61.6

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC-CC---HHHHHHHHHHHhcCCCCceeceeeEEE------------
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-MS---EDDFIEEAKVMTRLQHQNLVQLYGVCS------------  492 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-~~---~~~f~~E~~il~~l~HpNIV~l~g~~~------------  492 (513)
                      .+|.+.+.||+|+||.||+|....++..+++|... ..   .+.+.+|+++|++++|||||++++++.            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            67999999999999999999998766666555322 22   246889999999999999999999873            


Q ss_pred             --eCCeeEEEEccCCCCccc
Q psy17476        493 --KHRPIYIVTDTSSFRLGL  510 (513)
Q Consensus       493 --~~~~~~lV~E~~~~Gl~~  510 (513)
                        .....|+||||+++.|..
T Consensus        91 ~~~~~~~~lv~e~~~~~L~~  110 (320)
T 2i6l_A           91 LTELNSVYIVQEYMETDLAN  110 (320)
T ss_dssp             CCSCSEEEEEEECCSEEHHH
T ss_pred             ccccCceeEEeeccCCCHHH
Confidence              346889999999987643

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.89  E-value=1.5e-09  Score=110.81  Aligned_cols=82  Identities=26%  Similarity=0.381  Sum_probs=60.1

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC---C---HHHHHHHHHHHhcCC-CCceeceeeEEEeCC--eeEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM---S---EDDFIEEAKVMTRLQ-HQNLVQLYGVCSKHR--PIYI  499 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~---~---~~~f~~E~~il~~l~-HpNIV~l~g~~~~~~--~~~l  499 (513)
                      .+|++.+.||+|+||.||+|....++..+++|....   .   .+.+.+|+.+|+++. |||||++++++...+  .+||
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l   88 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL   88 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred             CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence            579999999999999999999987766666663221   1   245789999999997 999999999998644  7899


Q ss_pred             EEccCCCCccc
Q psy17476        500 VTDTSSFRLGL  510 (513)
Q Consensus       500 V~E~~~~Gl~~  510 (513)
                      |||||+++|..
T Consensus        89 v~e~~~~~L~~   99 (388)
T 3oz6_A           89 VFDYMETDLHA   99 (388)
T ss_dssp             EEECCSEEHHH
T ss_pred             EecccCcCHHH
Confidence            99999987743

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=98.89  E-value=3.5e-09  Score=105.39  Aligned_cols=82  Identities=20%  Similarity=0.357  Sum_probs=65.6

Q ss_pred             cCCcCceeEeEecccccceEEEEEE----eCceeeEEeecC-CCC---HHHHHHHHHHHhcCCCCceeceeeEEEe--CC
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKW----RGSIDVAMMKEG-TMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSK--HR  495 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~----~~~~~v~~~k~~-~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~--~~  495 (513)
                      +..++|++.+.||+|+||.||++++    ...+..+++|.. ...   .+.+.+|+++|++++||||+++++++..  ..
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   99 (327)
T 3lxl_A           20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ   99 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred             hchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence            4567899999999999999999995    334455555532 222   2458999999999999999999999873  46


Q ss_pred             eeEEEEccCCCC
Q psy17476        496 PIYIVTDTSSFR  507 (513)
Q Consensus       496 ~~~lV~E~~~~G  507 (513)
                      .++||||||++|
T Consensus       100 ~~~lv~e~~~~~  111 (327)
T 3lxl_A          100 SLRLVMEYLPSG  111 (327)
T ss_dssp             EEEEEEECCTTC
T ss_pred             eEEEEEeecCCC
Confidence            799999999876

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.89  E-value=1.8e-09  Score=109.58  Aligned_cols=92  Identities=22%  Similarity=0.328  Sum_probs=67.7

Q ss_pred             CCCCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC---C---HHHHHHHHHHHhcCCCCceeceeeEEE
Q psy17476        419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM---S---EDDFIEEAKVMTRLQHQNLVQLYGVCS  492 (513)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~---~---~~~f~~E~~il~~l~HpNIV~l~g~~~  492 (513)
                      +....|++. ++|++.+.||+|+||.||+|....++..+++|....   .   .+.+.+|+++|++++|||||++++++.
T Consensus        20 ~~~~~~~~~-~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~   98 (367)
T 2fst_X           20 LNKTIWEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT   98 (367)
T ss_dssp             ETTEEEEEE-TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             ecCcccCCC-CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence            334456665 679999999999999999999877666666664322   1   246889999999999999999999997


Q ss_pred             eC------CeeEEEEccCCCCcccc
Q psy17476        493 KH------RPIYIVTDTSSFRLGLL  511 (513)
Q Consensus       493 ~~------~~~~lV~E~~~~Gl~~~  511 (513)
                      ..      ..+|+||||+.+.|..+
T Consensus        99 ~~~~~~~~~~~~lv~e~~~~~L~~~  123 (367)
T 2fst_X           99 PARSLEEFNDVYLVTHLMGADLNNI  123 (367)
T ss_dssp             SCSSGGGCCCCEEEEECCCEECC--
T ss_pred             cCCccccCCeEEEEecccCCCHHHH
Confidence            54      56899999997777544

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=98.89  E-value=1e-09  Score=109.28  Aligned_cols=91  Identities=22%  Similarity=0.248  Sum_probs=73.0

Q ss_pred             CCCCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecC-CCC---HHHHHHHHHHHhcCC-CCceeceeeEEE-
Q psy17476        419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG-TMS---EDDFIEEAKVMTRLQ-HQNLVQLYGVCS-  492 (513)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~-~~~---~~~f~~E~~il~~l~-HpNIV~l~g~~~-  492 (513)
                      +....+++...+|++.+.||+|+||.||+|.+..++..+++|.. ...   .+.+.+|+.+|+++. |||||++++++. 
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~   97 (337)
T 3ll6_A           18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASI   97 (337)
T ss_dssp             STTCEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             hhcceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccc
Confidence            33457788888999999999999999999999776666666632 112   346889999999996 999999999995 


Q ss_pred             -------eCCeeEEEEccCCCCcc
Q psy17476        493 -------KHRPIYIVTDTSSFRLG  509 (513)
Q Consensus       493 -------~~~~~~lV~E~~~~Gl~  509 (513)
                             ....+++|||||.|.|.
T Consensus        98 ~~~~~~~~~~~~~lv~e~~~g~L~  121 (337)
T 3ll6_A           98 GKEESDTGQAEFLLLTELCKGQLV  121 (337)
T ss_dssp             CTTTSTTSSEEEEEEEECCSEEHH
T ss_pred             cccccccCCceEEEEEEecCCCHH
Confidence                   33458999999998763

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=98.89  E-value=4.6e-09  Score=103.70  Aligned_cols=86  Identities=27%  Similarity=0.432  Sum_probs=66.2

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeC---ceeeEEeecCC---CC---HHHHHHHHHHHhcCCCCceeceeeEEE
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGT---MS---EDDFIEEAKVMTRLQHQNLVQLYGVCS  492 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~---~~~v~~~k~~~---~~---~~~f~~E~~il~~l~HpNIV~l~g~~~  492 (513)
                      ..+.+...+|.+.+.||+|+||.||+|.+..   +...+++|...   ..   .+.|.+|+.+|++++||||+++++++.
T Consensus        27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~  106 (313)
T 3brb_A           27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI  106 (313)
T ss_dssp             TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred             HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence            4567788899999999999999999998764   33345555322   12   246899999999999999999999998


Q ss_pred             eCC-----eeEEEEccCCCC
Q psy17476        493 KHR-----PIYIVTDTSSFR  507 (513)
Q Consensus       493 ~~~-----~~~lV~E~~~~G  507 (513)
                      ...     ..++|||||++|
T Consensus       107 ~~~~~~~~~~~~v~e~~~~~  126 (313)
T 3brb_A          107 EMSSQGIPKPMVILPFMKYG  126 (313)
T ss_dssp             C-------CEEEEEECCTTC
T ss_pred             eccccCCcccEEEEecccCC
Confidence            754     359999999985

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.88  E-value=3.1e-09  Score=105.87  Aligned_cols=82  Identities=26%  Similarity=0.515  Sum_probs=63.5

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceee----EEeecCC-----CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCe
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDV----AMMKEGT-----MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v----~~~k~~~-----~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  496 (513)
                      +...+|++.+.||+|+||.||+|.+..+...    +++|...     ...+.|.+|+.+|++++|||||+++++|.... 
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-   90 (327)
T 3poz_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-   90 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-
T ss_pred             cCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-
Confidence            4567899999999999999999998654322    2444221     23467999999999999999999999998755 


Q ss_pred             eEEEEccCCCCc
Q psy17476        497 IYIVTDTSSFRL  508 (513)
Q Consensus       497 ~~lV~E~~~~Gl  508 (513)
                      .++||||+++|-
T Consensus        91 ~~~v~e~~~~g~  102 (327)
T 3poz_A           91 VQLITQLMPFGC  102 (327)
T ss_dssp             EEEEEECCTTCB
T ss_pred             eEEEEEecCCCc
Confidence            788999999863

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus}

Probab=98.88  E-value=3.6e-09  Score=93.08  Aligned_cols=80  Identities=23%  Similarity=0.388  Sum_probs=63.3

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      ..|+++.++|.+|+++|.. .++|+||||++++ .+.|+||++.   .                                
T Consensus        34 ~~WyhG~isR~eAe~lL~~-~~~G~FLVR~S~~~~g~y~LSv~~---~--------------------------------   77 (152)
T 2hmh_A           34 SGFYWSAVTGGEANLLLSA-EPAGTFLIRDSSDQRHFFTLSVKT---Q--------------------------------   77 (152)
T ss_dssp             TSSEETTCCHHHHHHHHHT-SCTTEEEEEECCSTTCSEEEEEEE---T--------------------------------
T ss_pred             CCCcCCCCCHHHHHHHhcC-CCCCcEEEEeCCCCCCcEEEEEEc---C--------------------------------
Confidence            4699999999999999975 6889999999976 7889999865   2                                


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecC-------cccCChhhhhhcccccC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEK-------HCCHSIPEVVNYHRHNS  397 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~-------~~F~sl~eLi~~~~~~~  397 (513)
                                                +.++|++|.. .+|.|++...       ..|.++.+||+||...+
T Consensus        78 --------------------------~~v~H~rI~~-~~g~f~l~~~~~~~~~~~~F~SL~eLV~~Y~~~~  121 (152)
T 2hmh_A           78 --------------------------SGTKNLRIQX-EGGSFSLQSDPRSTQPVPRFDXVLKLVHHYMPPQ  121 (152)
T ss_dssp             --------------------------TEEEEEEEEC-GGGCBEECBCTTCSSCCCCBSSHHHHHHHTCCCC
T ss_pred             --------------------------CceEEEEEEe-cCCEEEEecccccccccCccCCHHHHHHHHhhCc
Confidence                                      3455555554 4455666554       78999999999999874

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.87  E-value=2.3e-09  Score=104.79  Aligned_cols=79  Identities=18%  Similarity=0.289  Sum_probs=65.2

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC---HHHHHHHHHHHhcCCCCceeceeeEEEe------------
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSK------------  493 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~------------  493 (513)
                      ++|++.+.||+|+||.||+|....++..+++|.....   .+.+.+|+.+|++++||||+++++++.+            
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   85 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK   85 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence            4689999999999999999998766666666643322   3468899999999999999999999865            


Q ss_pred             -CCeeEEEEccCCCC
Q psy17476        494 -HRPIYIVTDTSSFR  507 (513)
Q Consensus       494 -~~~~~lV~E~~~~G  507 (513)
                       ....|+|||||++|
T Consensus        86 ~~~~~~lv~e~~~~~  100 (303)
T 1zy4_A           86 KKSTLFIQMEYCENG  100 (303)
T ss_dssp             CEEEEEEEEECCCSC
T ss_pred             cCCceEEEEecCCCC
Confidence             45789999999874

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.87  E-value=1.4e-09  Score=112.93  Aligned_cols=88  Identities=15%  Similarity=0.124  Sum_probs=68.3

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCCHHHHHHHHHHHhcC-CCCceeceeeEEEeCCeeEEE
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      ..+.+...+|...+.||+|+||.|+.........||+++........+.+|+++|+++ +|||||++++++.+....|||
T Consensus        17 ~~~~i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv   96 (432)
T 3p23_A           17 SVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA   96 (432)
T ss_dssp             -CEEETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CcEEEccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence            3467777889999999999999965433333445555544333334577899999999 899999999999999999999


Q ss_pred             EccCCCCcc
Q psy17476        501 TDTSSFRLG  509 (513)
Q Consensus       501 ~E~~~~Gl~  509 (513)
                      ||||+++|.
T Consensus        97 ~E~~~g~L~  105 (432)
T 3p23_A           97 IELCAATLQ  105 (432)
T ss_dssp             EECCSEEHH
T ss_pred             EECCCCCHH
Confidence            999998764

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=98.86  E-value=4.4e-09  Score=114.97  Aligned_cols=85  Identities=27%  Similarity=0.527  Sum_probs=68.4

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeCc---eeeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceeeEEEe
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGS---IDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYGVCSK  493 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~---~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g~~~~  493 (513)
                      ..|++..++|++.+.||+|+||.||+|.+...   ...+++|....  .   .+.|.+|+.+|++++|||||++++++. 
T Consensus       383 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-  461 (656)
T 2j0j_A          383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-  461 (656)
T ss_dssp             GGTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-
T ss_pred             cccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-
Confidence            35778889999999999999999999998643   23344553222  2   256899999999999999999999985 


Q ss_pred             CCeeEEEEccCCCC
Q psy17476        494 HRPIYIVTDTSSFR  507 (513)
Q Consensus       494 ~~~~~lV~E~~~~G  507 (513)
                      ++..|||||||++|
T Consensus       462 ~~~~~lv~E~~~~g  475 (656)
T 2j0j_A          462 ENPVWIIMELCTLG  475 (656)
T ss_dssp             SSSCEEEEECCTTC
T ss_pred             cCceEEEEEcCCCC
Confidence            46789999999975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	513
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-23
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-07
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-21
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-08
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-20
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-07
d1gl5a_	67	b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musc	2e-20
d1gl5a_	67	b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musc	5e-10
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-19
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-08
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-18
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-06
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	9e-18
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-06
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	5e-05
d1awwa_	67	b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Hom	3e-17
d1awwa_	67	b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Hom	1e-09
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-16
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-09
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	0.001
d2rn8a1	53	b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus	5e-16
d2rn8a1	53	b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus	1e-08
d1ckaa_	57	b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse	1e-15
d1ckaa_	57	b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse	3e-08
d1k4us_	62	b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId	2e-15
d1k4us_	62	b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId	3e-08
d1qcfa1	65	b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Hu	2e-15
d1qcfa1	65	b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Hu	5e-08
d1u06a1	55	b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chic	3e-15
d1u06a1	55	b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chic	3e-08
d2oq1a1	130	d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70	3e-15
d1efna_	57	b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase,	7e-15
d1luia_	108	d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mou	7e-15
d1luia_	108	d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mou	3e-13
d2iima1	62	b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 d	1e-14
d2iima1	62	b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 d	6e-08
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-14
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	0.004
d2oq1a2	124	d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-7	2e-14
d2oq1a2	124	d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-7	4e-14
d1fmka1	64	b.34.2.1 (A:82-145) c-src protein tyrosine kinase	2e-14
d2hspa_	71	b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (	2e-14
d2hspa_	71	b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (	8e-08
d1lkka_	105	d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo	2e-14
d1lkka_	105	d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo	1e-13
d1o48a_	106	d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo s	3e-14
d1o48a_	106	d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo s	7e-14
d1ujya_	76	b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens	3e-14
d1ujya_	76	b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens	4e-07
d1gcqa_	56	b.34.2.1 (A:) Growth factor receptor-bound protein	4e-14
d1gcqa_	56	b.34.2.1 (A:) Growth factor receptor-bound protein	5e-07
d1arka_	60	b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo	4e-14
d1u5sa1	71	b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [Tax	4e-14
d1k9aa1	71	b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (cs	4e-14
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	6e-14
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	6e-05
d1ugva_	72	b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA062	8e-14
d1ugva_	72	b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA062	7e-07
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	8e-14
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-04
d1sema_	58	b.34.2.1 (A:) Growth factor receptor-bound protein	9e-14
d1sema_	58	b.34.2.1 (A:) Growth factor receptor-bound protein	4e-07
d1jo8a_	58	b.34.2.1 (A:) Actin binding protein ABP1 {Baker's	1e-13
d1i3za_	103	d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat	1e-13
d1utia_	57	b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona	1e-13
d1utia_	57	b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona	9e-07
d1qada_	107	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	2e-13
d1qada_	107	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	8e-11
d1a81a1	129	d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Hom	2e-13
d1a81a1	129	d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Hom	3e-10
d1qcfa2	103	d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {H	2e-13
d1qcfa2	103	d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {H	7e-13
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-13
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-06
d1opka1	57	b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domai	2e-13
d1opka1	57	b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domai	1e-06
d1uj0a_	58	b.34.2.1 (A:) Signal transducing adaptor molecule	3e-13
d1uj0a_	58	b.34.2.1 (A:) Signal transducing adaptor molecule	2e-06
d1jyra_	96	d.93.1.1 (A:) Growth factor receptor-bound protein	4e-13
d1jyra_	96	d.93.1.1 (A:) Growth factor receptor-bound protein	8e-09
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-13
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	0.001
d1g83a2	104	d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (H	6e-13
d1g83a2	104	d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (H	9e-13
d1udla_	98	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	8e-13
d1udla_	98	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	7e-06
d2eyva1	109	d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo	9e-13
d1gria1	56	b.34.2.1 (A:1-56) Growth factor receptor-bound pro	9e-13
d1gria1	56	b.34.2.1 (A:1-56) Growth factor receptor-bound pro	1e-05
d1ng2a2	118	b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic	9e-13
d1ng2a2	118	b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic	1e-06
d1ycsb2	63	b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [	1e-12
d1ycsb2	63	b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [	5e-07
d1uhfa_	69	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-12
d1uhfa_	69	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-05
d2shpa3	108	d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Hu	2e-12
d1blja_	114	d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mou	2e-12
d1blja_	114	d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mou	5e-12
d1rpya_	86	d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus nor	2e-12
d1rpya_	86	d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus nor	3e-08
d1uhca_	79	b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIA	2e-12
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-12
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-06
d1opka2	101	d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (M	2e-12
d1opka2	101	d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (M	4e-12
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-12
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-07
d1rjaa_	100	d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tu	3e-12
d1rjaa_	100	d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tu	3e-11
d2shpa2	109	d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Huma	3e-12
d2shpa2	109	d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Huma	3e-09
d1oota_	58	b.34.2.1 (A:) Hypothetical protein YFR024c {Baker'	5e-12
d1uura3	131	d.93.1.1 (A:577-707) STAT homologue {Dictyostelium	5e-12
d1uura3	131	d.93.1.1 (A:577-707) STAT homologue {Dictyostelium	2e-06
d2fcia1	105	d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (B	6e-12
d2fcia1	105	d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (B	4e-11
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	6e-12
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-06
d1ue9a_	80	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-11
d1d4ta_	104	d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sap	1e-11
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-11
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	0.002
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-11
d1i07a_	59	b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus	1e-11
d1i07a_	59	b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus	3e-05
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-11
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	0.001
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	0.002
d1j3ta_	74	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-11
d1j3ta_	74	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	2e-05
d1r1qa_	97	d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA	2e-11
d1r1qa_	97	d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA	4e-09
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-11
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-04
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-11
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	0.001
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-11
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	0.001
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-11
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	8e-08
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-04
d1a81a2	125	d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (H	3e-11
d1a81a2	125	d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (H	4e-11
d2v1ra1	67	b.34.2.1 (A:10-76) Peroxisomal membrane protein Pe	4e-11
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-11
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-07
d1nrva_	105	d.93.1.1 (A:) Growth factor receptor-bound protein	4e-11
d1nrva_	105	d.93.1.1 (A:) Growth factor receptor-bound protein	2e-10
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-11
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	5e-11
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	0.004
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	7e-11
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-07
d1fu6a_	111	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	7e-11
d1fu6a_	111	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	3e-09
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	7e-11
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	0.002
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	8e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-04
d1kjwa1	96	b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicu	1e-10
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-10
d1jwoa_	97	d.93.1.1 (A:) Csk homologous kinase Chk {Human (Ho	2e-10
d1jwoa_	97	d.93.1.1 (A:) Csk homologous kinase Chk {Human (Ho	8e-10
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-10
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-07
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-10
d1xa6a2	141	d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal dom	4e-10
d1xa6a2	141	d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal dom	1e-06
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-10
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-05
d1uffa_	93	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	5e-10
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	5e-10
d1wlpb1	53	b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic	6e-10
d1wlpb1	53	b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic	2e-04
d2qmsa1	113	d.93.1.1 (A:420-532) Growth factor receptor-bound	7e-10
d1spka_	72	b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RI	8e-10
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-09
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	5e-08
d1gcqc_	69	b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mu	1e-09
d1gcqc_	69	b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mu	0.002
d1wfwa_	74	b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [Ta	1e-09
d1wfwa_	74	b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [Ta	6e-05
d1wiea_	96	b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human	2e-09
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-09
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-07
d1bb9a_	83	b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicu	2e-09
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-09
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-09
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	0.002
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-09
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-09
d1mila_	104	d.93.1.1 (A:) Shc adaptor protein {Human (Homo sap	3e-09
d1mila_	104	d.93.1.1 (A:) Shc adaptor protein {Human (Homo sap	2e-08
d1zuua1	56	b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyc	4e-09
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-09
d1ng2a1	58	b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic	5e-09
d1ng2a1	58	b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic	4e-04
d2cs0a1	106	d.93.1.1 (A:8-113) Hematopoietic SH2 domain contai	5e-09
d2cs0a1	106	d.93.1.1 (A:8-113) Hematopoietic SH2 domain contai	2e-08
d1k9aa2	101	d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (	6e-09
d1k9aa2	101	d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (	8e-09
d2izva2	112	d.93.1.1 (A:274-385) Suppressor of cytokine signal	6e-09
d2izva2	112	d.93.1.1 (A:274-385) Suppressor of cytokine signal	5e-08
d1bg1a3	141	d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus)	6e-09
d1i1ja_	106	b.34.2.1 (A:) Melanoma inhibitory activity protein	7e-09
d1i1ja_	106	b.34.2.1 (A:) Melanoma inhibitory activity protein	0.001
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-08
d2c9wa2	103	d.93.1.1 (A:32-134) Suppressor of cytokine signali	2e-08
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-08
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	7e-07
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-08
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-08
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-08
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	6e-08
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	7e-08
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-07
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-07
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-07
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-07
d1phta_	83	b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-a	6e-07
d1t0ha_	96	b.34.2.1 (A:) SH3-like domain of the L-type calciu	1e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-06
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-06
d1ug1a_	92	b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIA	3e-06
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-06
d1vyva1	145	b.34.2.1 (A:71-215) SH3-like domain of the L-type	3e-06
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-06
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-06
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	0.003
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	5e-06
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-05
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-05
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	7e-05
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	0.004
d1vyua1	136	b.34.2.1 (A:39-174) SH3-like domain of the L-type	7e-04

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.6 bits (245), Expect = 1e-23
 Identities = 46/91 (50%), Positives = 59/91 (64%), Gaps = 3/91 (3%)

Query: 414 PATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIE 471
           P T GL+ D WEI    L L  +LG G FG V  G W G+  VA+  +K GTMS + F++
Sbjct: 2   PQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ 61

Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           EA+VM +L+H+ LVQLY V S   PIYIVT+
Sbjct: 62  EAQVMKKLRHEKLVQLYAVVS-EEPIYIVTE 91

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 1e-07
 Identities = 23/56 (41%), Positives = 37/56 (66%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
           +   Y RF+ KSDVW++G+L+ E+ T G++PY  + N EV+D+V+RG  +  P   
Sbjct: 184 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 239

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.9 bits (225), Expect = 4e-21
 Identities = 53/79 (67%), Positives = 66/79 (83%), Gaps = 2/79 (2%)

Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQN 483
           IDP +L  L+ELG+GQFGVV+ GKWRG  DVA+  +KEG+MSED+FIEEAKVM  L H+ 
Sbjct: 1   IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 60

Query: 484 LVQLYGVCSKHRPIYIVTD 502
           LVQLYGVC+K RPI+I+T+
Sbjct: 61  LVQLYGVCTKQRPIFIITE 79

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 2e-08
 Identities = 28/53 (52%), Positives = 41/53 (77%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           VL Y++FSSKSD+WA+GVLMWE+++ GKMPY R  N+E  + + +G+ L +P 
Sbjct: 172 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPH 224

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 1e-20
 Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 3/83 (3%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRL 479
           D+WE+    L L+E LG+GQFG V  G + G   VA+  +K+G+MS D F+ EA +M +L
Sbjct: 6   DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65

Query: 480 QHQNLVQLYGVCSKHRPIYIVTD 502
           QHQ LV+LY V ++  PIYI+T+
Sbjct: 66  QHQRLVRLYAVVTQE-PIYIITE 87

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 2e-07
 Identities = 21/56 (37%), Positives = 37/56 (66%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
           + +NY  F+ KSDVW++G+L+ E+ T G++PY  + N EV+  ++RG  + +P   
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.5 bits (204), Expect = 2e-20
 Identities = 33/65 (50%), Positives = 45/65 (69%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLG 185
           ++VVA+Y F+A E  DL LE+G EY +++    HWW+ +DK GS GYIPSNYV  K+   
Sbjct: 3   EIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKKSNN 62

Query: 186 LQKYD 190
           L +YD
Sbjct: 63  LDQYD 67

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.3 bits (128), Expect = 5e-10
 Identities = 20/43 (46%), Positives = 30/43 (69%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           ++VVA+Y F+A E  DL LE+G EY +++    HWW+ +DK G
Sbjct: 3   EIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYG 45

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.3 bits (213), Expect = 1e-19
 Identities = 43/79 (54%), Positives = 57/79 (72%), Gaps = 2/79 (2%)

Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAM--MKEGTMSEDDFIEEAKVMTRLQHQN 483
           IDP+EL  ++E+GSGQFG+V  G W     VA+  ++EG MSE+DFIEEA+VM +L H  
Sbjct: 2   IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 61

Query: 484 LVQLYGVCSKHRPIYIVTD 502
           LVQLYGVC +  PI +V +
Sbjct: 62  LVQLYGVCLEQAPICLVFE 80

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 4e-08
 Identities = 29/55 (52%), Positives = 42/55 (76%)

Query: 201 HQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
            +V +++R+SSKSDVW++GVLMWEVF+ GK+PY    N+EVV+ +  G  L KP+
Sbjct: 171 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 225

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.8 bits (204), Expect = 3e-18
 Identities = 36/86 (41%), Positives = 59/86 (68%), Gaps = 3/86 (3%)

Query: 420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDDFIEEAKVM 476
           ++DKWE++  ++ +  +LG GQ+G V  G W+   + VA+  +KE TM  ++F++EA VM
Sbjct: 8   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 67

Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
             ++H NLVQL GVC++  P YI+T+
Sbjct: 68  KEIKHPNLVQLLGVCTREPPFYIITE 93

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.6 bits (110), Expect = 3e-06
 Identities = 22/56 (39%), Positives = 37/56 (66%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
           + L Y +FS KSDVWA+GVL+WE+ T G  PY  +  ++V + +++   +E+P+  
Sbjct: 186 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 241

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 9e-18
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVMTR 478
           D WEI   ++ + + +GSG FG V +GKW G + V M+     +      F  E  V+ +
Sbjct: 1   DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60

Query: 479 LQHQNLVQLYGVCSKHRPIYIVTD 502
            +H N++   G  +    + IVT 
Sbjct: 61  TRHVNILLFMGYSTAP-QLAIVTQ 83

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 4e-06
 Identities = 13/73 (17%), Positives = 37/73 (50%), Gaps = 1/73 (1%)

Query: 200 IHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYV 259
           + ++ +   +S +SDV+A+G++++E+ T G++PY  + N + +  +     L    +   
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLSPDLSKVR 235

Query: 260 GDMSRQRAESILK 272
            +  +     + +
Sbjct: 236 SNCPKAMKRLMAE 248

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (101), Expect = 5e-05
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETK 49
               SL ++L   E      +  L+D+  Q  +GM YL   + IHR+ K
Sbjct: 85  CEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (181), Expect = 3e-17
 Identities = 29/57 (50%), Positives = 38/57 (66%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
           K VVALY +  +   DL L KG EY +++++   WW+ +DKNG  GYIPSNYV E E
Sbjct: 9   KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE 65

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (126), Expect = 1e-09
 Identities = 19/43 (44%), Positives = 28/43 (65%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           K VVALY +  +   DL L KG EY +++++   WW+ +DKNG
Sbjct: 9   KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNG 51

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 3e-16
 Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 3/81 (3%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMK-EGTMSEDDFIEEAKVMTRLQHQ 482
           W ++  EL LL+ +G G+FG V  G +RG+  VA+   +   +   F+ EA VMT+L+H 
Sbjct: 2   WALNMKELKLLQTIGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQAFLAEASVMTQLRHS 60

Query: 483 NLVQLYGVCSKHR-PIYIVTD 502
           NLVQL GV  + +  +YIVT+
Sbjct: 61  NLVQLLGVIVEEKGGLYIVTE 81

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (132), Expect = 4e-09
 Identities = 22/56 (39%), Positives = 40/56 (71%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
           + L   +FS+KSDVW++G+L+WE+++ G++PY R+   +VV RV++G  ++ P   
Sbjct: 170 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGC 225

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKS 51
           M  GSL++YLR    ++      LL   + VC+ M YLE +N++HR+    
Sbjct: 83  MAKGSLVDYLRSRGRSVL-GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAAR 132

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

 Score = 69.9 bits (171), Expect = 5e-16
 Identities = 23/53 (43%), Positives = 37/53 (69%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V+ALY ++  +  +L+L    EY ++D ++ HWW+V+DKNG  GY PS+Y+ E
Sbjct: 1   VIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVE 53

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

 Score = 49.1 bits (117), Expect = 1e-08
 Identities = 17/43 (39%), Positives = 29/43 (67%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
           V+ALY ++  +  +L+L    EY ++D ++ HWW+V+DKNG  
Sbjct: 1   VIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHE 43

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.6 bits (168), Expect = 1e-15
 Identities = 19/55 (34%), Positives = 28/55 (50%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           + V AL+ F   +  DL  +KG    + D  +E WW  +D  G  G IP  YV++
Sbjct: 2   EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 56

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.2 bits (115), Expect = 3e-08
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           + V AL+ F   +  DL  +KG    + D  +E WW  +D  G
Sbjct: 2   EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEG 44

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.6 bits (168), Expect = 2e-15
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 121 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           Q+ +   V AL+ ++A +  DL  ++G    V+    E W + +   G VG  P  +V++
Sbjct: 1   QLKKGSQVEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLEGE-SKGKVGIFPKVFVED 59

Query: 181 KE 182
             
Sbjct: 60  SA 61

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (115), Expect = 3e-08
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 68  QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
           Q+ +   V AL+ ++A +  DL  ++G    V+    E W + +
Sbjct: 1   QLKKGSQVEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLEGE 44

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 65

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (168), Expect = 2e-15
 Identities = 23/57 (40%), Positives = 33/57 (57%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
            +VVALY ++AI   DLS +KG +  V++++ E W          GYIPSNYV   +
Sbjct: 5   IIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVD 61

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 65

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (113), Expect = 5e-08
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
            +VVALY ++AI   DLS +KG +  V++++ E W        
Sbjct: 5   IIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATR 47

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 55

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 67.8 bits (166), Expect = 3e-15
 Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           ++V+ALY ++     +++++KG    +++ T + WWKV+  N   G++P+ YVK+
Sbjct: 1   ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKK 54

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 55

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 47.8 bits (114), Expect = 3e-08
 Identities = 11/39 (28%), Positives = 26/39 (66%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
           ++V+ALY ++     +++++KG    +++ T + WWKV+
Sbjct: 1   ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE 39

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 3e-15
 Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 13/113 (11%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
            +G F++R    + G Y LSL          H+ I++   G + ++         E+  +
Sbjct: 28  ADGLFLLRQCLRSLGGYVLSLVH---DVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEF 84

Query: 393 HRHNSGGLASRLKTSPCDRPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVV 445
           +  +  GL   L+  PC+RP           ++       L + +        
Sbjct: 85  YSRDPDGLPCNLRK-PCNRPSGLE--PQPGVFDC------LRDAMVRDYVRQT 128

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (163), Expect = 7e-15
 Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKE 180
           + VALY ++AI   DLS  KG ++++++ ++  WW+ +    G  GYIPSNYV  
Sbjct: 2   LFVALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAP 56

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.6 bits (167), Expect = 7e-15
 Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 5/79 (6%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNS 313
           WY   +SR +AE +L    KEG F+VR+S T G YT+S++TK     +P +KHYHIK+ +
Sbjct: 8   WYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETN 67

Query: 314 RGEFF--LSEKHCCHSIPE 330
                  ++EK+   SIP 
Sbjct: 68  DSPKRYYVAEKYVFDSIPL 86

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.9 bits (155), Expect = 3e-13
 Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 5/83 (6%)

Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVP---HPHVKHYHIKQNSRGEFF--LSEKHCCHSI 386
             KEG F+VR+S T G YT+S++TK     +P +KHYHIK+ +       ++EK+   SI
Sbjct: 25  TGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSI 84

Query: 387 PEVVNYHRHNSGGLASRLKTSPC 409
           P ++ YH++N GGL +RL+   C
Sbjct: 85  PLLIQYHQYNGGGLVTRLRYPVC 107

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (162), Expect = 1e-14
 Identities = 17/58 (29%), Positives = 32/58 (55%)

Query: 123 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           ++  +V+AL+ ++    GDL  EKG +  +++ + E W       G  G+IP N+V +
Sbjct: 4   LQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAK 61

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (112), Expect = 6e-08
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 70  IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           ++  +V+AL+ ++    GDL  EKG +  +++ + E W       G
Sbjct: 4   LQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTG 49

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.1 bits (176), Expect = 1e-14
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 11/92 (11%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID------VAM----MKEGTMSEDDFIE 471
            KWE     L   + LG+G FG V      G I       VA+            +  + 
Sbjct: 16  HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 75

Query: 472 EAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
           E KV++ L  H N+V L G C+   P  ++T+
Sbjct: 76  ELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 0.004
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 15/64 (23%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGL---------------LLDMCIQVCKGMAYLERHNYIH 45
             +G LLN+LRR  ++   +                  LL    QV KGMA+L   N IH
Sbjct: 109 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIH 168

Query: 46  RETK 49
           R+  
Sbjct: 169 RDLA 172

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 124

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 2e-14
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
            +G F++R    +G Y LSL        V HY I Q+  G++ + E     ++ ++V Y 
Sbjct: 51  TDGKFLLRPRKEQGTYALSLI---YGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYL 107

Query: 394 RHNSGGLASRLKTSPC 409
           +  + GL   LK   C
Sbjct: 108 KLKADGLIYCLKE-AC 122

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 124

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (162), Expect = 4e-14
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 257 WYVGDMSRQRAESILKQED-KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           WY   ++R+ AE  L      +G F++R    +G Y LSL        V HY I Q+  G
Sbjct: 31  WYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLI---YGKTVYHYLISQDKAG 87

Query: 316 EFFLSEKHCCHSIPE 330
           ++ + E     ++ +
Sbjct: 88  KYCIPEGTKFDTLWQ 102

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (161), Expect = 2e-14
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK-DKNGSVGYIPSNYVKEKE 182
             VALY +++    DLS +KG   +++++T+  WW       G  GYIPSNYV   +
Sbjct: 4   TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD 60

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (161), Expect = 2e-14
 Identities = 16/53 (30%), Positives = 27/53 (50%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V AL+ +KA    +L+  K A  + ++  +  WW+         + PSNYV+E
Sbjct: 9   VKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEE 61

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (112), Expect = 8e-08
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
           V AL+ +KA    +L+  K A  + ++  +  WW+       +
Sbjct: 9   VKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQ 51

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 2e-14
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVP--HPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
             G F++R S ST G ++LS+          VKHY I+    G F++S +     + E+V
Sbjct: 26  THGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELV 85

Query: 391 NYHRHNSGGLASRLKTSPC 409
            ++ + S GL +RL   PC
Sbjct: 86  RHYTNASDGLCTRLSR-PC 103

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 1e-13
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)

Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSLYTKVP--HPHVKHYHIKQN 312
           W+  ++SR+ AE  L    +  G F++R S ST G ++LS+          VKHY I+  
Sbjct: 6   WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 65

Query: 313 SRGEFFLSEKHCCHSIPEV 331
             G F++S +     + E+
Sbjct: 66  DNGGFYISPRITFPGLHEL 84

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (162), Expect = 3e-14
 Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 4/79 (5%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTK--VPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
             G F+VR S +TKG Y LS+         +VKHY I++   G F+++ +   +S+ ++V
Sbjct: 27  PRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLV 86

Query: 391 NYHRHNSGGLASRLKTSPC 409
            Y+  ++ GL  RL T+ C
Sbjct: 87  AYYSKHADGLCHRL-TTVC 104

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 7e-14
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 4/78 (5%)

Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSLYTK--VPHPHVKHYHIKQN 312
           WY G ++R+ +E +L   E+  G F+VR S +TKG Y LS+         +VKHY I++ 
Sbjct: 7   WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 66

Query: 313 SRGEFFLSEKHCCHSIPE 330
             G F+++ +   +S+ +
Sbjct: 67  DSGGFYITSRTQFNSLQQ 84

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (160), Expect = 3e-14
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
              +V A + FK     +LS+ KG    V    +  WW+    NG  G+ PSNYV+E
Sbjct: 9   HQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWEGT-LNGRTGWFPSNYVRE 64

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (108), Expect = 4e-07
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 71  RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
              +V A + FK     +LS+ KG    V    +  WW+  
Sbjct: 9   HQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWEGT 49

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (158), Expect = 4e-14
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           V AL+ F   E G+L   +G    VMD++  +WWK    +G  G  P NYV  
Sbjct: 4   VQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGA-CHGQTGMFPRNYVTP 55

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (106), Expect = 5e-07
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
           V AL+ F   E G+L   +G    VMD++  +WWK  
Sbjct: 4   VQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGA 40

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]} Length = 60

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (158), Expect = 4e-14
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK-VKDKNGSVGYIPSNYVKE 180
           K+  A+Y + A +  ++S + G     +    E W      + G  G +P+NYV+ 
Sbjct: 4   KIFRAMYDYMAADADEVSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEA 59

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (158), Expect = 4e-14
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEV--MDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            VV  LYPF ++   +L+ EKG   EV    +    WWK K+  G VG +P NYV  
Sbjct: 7   HVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVV 63

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (158), Expect = 4e-14
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQ-EHWWKVKDKNGSVGYIPSNYVKEKE 182
            +A Y F      DL   KG    ++  T+  +W+K K+K G  G IP+NYV+++E
Sbjct: 9   CIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 64

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.3 bits (171), Expect = 6e-14
 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 10/91 (10%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMSED--DFIE 471
           D+WE+   ++ +  ELG G FG+V  G  +G +         +  + E     +  +F+ 
Sbjct: 13  DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 72

Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           EA VM      ++V+L GV S+ +P  ++ +
Sbjct: 73  EASVMKEFNCHHVVRLLGVVSQGQPTLVIME 103

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 6e-05
 Identities = 21/56 (37%), Positives = 34/56 (60%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
           + L    F++ SDVW++GV++WE+ T  + PY  L N +V+  V  G +L+KP   
Sbjct: 205 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 260

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (156), Expect = 8e-14
 Identities = 19/55 (34%), Positives = 26/55 (47%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           +   ALY  KA    +LS   G  ++ +  +QE  W     NG  G IP NYV+ 
Sbjct: 11  RKAKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEF 65

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (105), Expect = 7e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
           +   ALY  KA    +LS   G  ++ +  +QE  W     NG
Sbjct: 11  RKAKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNG 53

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.2 bits (171), Expect = 8e-14
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGS------IDVAM----MKEGTMSEDDFIEE 472
           KWE     L   + LGSG FG V      G       I VA+     K  +   +  + E
Sbjct: 31  KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSE 90

Query: 473 AKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
            K+MT+L  H+N+V L G C+   PIY++ +
Sbjct: 91  LKMMTQLGSHENIVNLLGACTLSGPIYLIFE 121

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 3e-04
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDR-VQRGIILEKPKAW 257
            L    ++ KSDVW+YG+L+WE+F+ G  PY  +       + +Q G  +++P   
Sbjct: 237 SLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYA 292

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

 Score = 63.5 bits (155), Expect = 9e-14
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
            K V AL+ F   E G+L+ ++G    +++    +WW+ +  N   G  PSNYV  
Sbjct: 2   TKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQ-LNNRRGIFPSNYVCP 56

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

 Score = 44.7 bits (106), Expect = 4e-07
 Identities = 11/40 (27%), Positives = 22/40 (55%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
            K V AL+ F   E G+L+ ++G    +++    +WW+ +
Sbjct: 2   TKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQ 41

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.6 bits (155), Expect = 1e-13
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK-DKNGSVGYIPSNYVK 179
             A Y + A E  +L+  +  +   ++   + WW  + +K+GS G  PSNYV 
Sbjct: 3   ATAEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVS 55

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 64.7 bits (157), Expect = 1e-13
 Identities = 22/156 (14%), Positives = 43/156 (27%), Gaps = 58/156 (37%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           +Y G ++++  E++L +   +G F++R+S S  G   L          V  Y I +   G
Sbjct: 5   YYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLC---VSFKKLVYSYRIFREKHG 61

Query: 316 EFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEF 375
            + +                                                        
Sbjct: 62  YYRIETDAHTP------------------------------------------------- 72

Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR 411
               +    ++ E+V+ +     GL   L   P  R
Sbjct: 73  ----RTIFPNLQELVSKYGKPGQGLVVHLSN-PIMR 103

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.2 bits (154), Expect = 1e-13
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           +   ALY F+A+E  +L    G   EV+D +   WW  +  +  +G  P+NYV  
Sbjct: 2   RWARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGR-LHNKLGLFPANYVAP 55

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.5 bits (103), Expect = 9e-07
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
           +   ALY F+A+E  +L    G   EV+D +   WW  +
Sbjct: 2   RWARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGR 40

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]} Length = 107

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 64.7 bits (157), Expect = 2e-13
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 4/76 (5%)

Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           K W VG  +R +AE++L+ + ++G F+VR SS +G Y  S+        VKH  I + + 
Sbjct: 9   KTWNVGSSNRNKAENLLRGK-RDGTFLVRESSKQGCYACSVVV---DGEVKHCVINKTAT 64

Query: 315 GEFFLSEKHCCHSIPE 330
           G  F    +   S+ E
Sbjct: 65  GYGFAEPYNLYSSLKE 80

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]} Length = 107

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.0 bits (137), Expect = 8e-11
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 8/77 (10%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
           ++G F+VR SS +G Y  S+        VKH  I + + G  F    +   S+ E+V ++
Sbjct: 29  RDGTFLVRESSKQGCYACSVVV---DGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHY 85

Query: 394 RHNS-----GGLASRLK 405
           +H S       L   L 
Sbjct: 86  QHTSLVQHNDSLNVTLA 102

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 129

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 2e-13
 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 8/97 (8%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
            +G +++R S +  G + LS+          HY I++   G + ++      S  ++ +Y
Sbjct: 27  SDGLYLLRQSRNYLGGFALSVA---HGRKAHHYTIERELNGTYAIAGGRTHASPADLCHY 83

Query: 393 HRHNSGGLASRLKTSPCDRP---VPATAGLSHDKWEI 426
           H   S GL   LK  P +RP    P T      K  +
Sbjct: 84  HSQESDGLVCLLKK-PFNRPQGVQPKTGPFEDLKENL 119

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 129

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 3e-10
 Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 257 WYVGDMSRQRAESILKQ-EDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           ++ G+++R+ AE  L Q    +G +++R S +  G + LS+          HY I++   
Sbjct: 7   FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVA---HGRKAHHYTIERELN 63

Query: 315 GEFFLSEKHCCHSIPE 330
           G + ++      S  +
Sbjct: 64  GTYAIAGGRTHASPAD 79

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 2e-13
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 334 KEGCFVVRNSST-KGLYTLSLYTKVP--HPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
             G F++R+S T KG Y+LS+    P     VKHY I+    G F++S +    ++ E+V
Sbjct: 23  MLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELV 82

Query: 391 NYHRHNSGGLASRLKTSPC 409
           ++++  + GL  +L   PC
Sbjct: 83  DHYKKGNDGLCQKLSV-PC 100

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.8 bits (152), Expect = 7e-13
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNSST-KGLYTLSLYTKVP--HPHVKHYHIKQN 312
           W+   +SR+ AE  L    +  G F++R+S T KG Y+LS+    P     VKHY I+  
Sbjct: 3   WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTL 62

Query: 313 SRGEFFLSEKHCCHSIPE 330
             G F++S +    ++ E
Sbjct: 63  DNGGFYISPRSTFSTLQE 80

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.3 bits (166), Expect = 2e-13
 Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 9/87 (10%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGS----IDVAMMKEGTMSEDD----FIEEAKV 475
           +EI    + L   +G GQFG V +G +       + VA+      + D     F++EA  
Sbjct: 2   YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALT 61

Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           M +  H ++V+L GV +++ P++I+ +
Sbjct: 62  MRQFDHPHIVKLIGVITEN-PVWIIME 87

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 2e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query: 201 HQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
            + +N+ RF+S SDVW +GV MWE+   G  P+  +KN +V+ R++ G  L  P   
Sbjct: 178 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 234

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.5 bits (152), Expect = 2e-13
 Identities = 17/54 (31%), Positives = 24/54 (44%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           + VALY F A     LS+ KG +  V+       W         G++PSNY+  
Sbjct: 2   LFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITP 55

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.6 bits (103), Expect = 1e-06
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 74  VVVALYPFKAIEGGDLSLEKGAEYEVM-DDTQEHWWKVKDKNGI 116
           + VALY F A     LS+ KG +  V+  +    W + + KNG 
Sbjct: 2   LFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQ 45

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.4 bits (152), Expect = 3e-13
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           + V ALY F+A+E  +L+ + G    V+DD+  +WW+ +  +   G  PSN+V  
Sbjct: 3   RRVRALYDFEAVEDNELTFKHGELITVLDDSDANWWQGE-NHRGTGLFPSNFVTT 56

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 15/44 (34%), Positives = 27/44 (61%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGI 116
           + V ALY F+A+E  +L+ + G    V+DD+  +WW+ ++  G 
Sbjct: 3   RRVRALYDFEAVEDNELTFKHGELITVLDDSDANWWQGENHRGT 46

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.0 bits (153), Expect = 4e-13
 Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 5/76 (6%)

Query: 256 AWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           AW+ G + R +AE +L ++  +G F++R S S  G ++LS+        V+H+ + ++  
Sbjct: 4   AWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKF---GNDVQHFKVLRDGA 60

Query: 315 GEFFLSEKHCCHSIPE 330
           G++FL      +S+ E
Sbjct: 61  GKYFL-WVVKFNSLNE 75

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (121), Expect = 8e-09
 Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 5/72 (6%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
            +G F++R S S  G ++LS+        V+H+ + ++  G++FL      +S+ E+V+Y
Sbjct: 24  HDGAFLIRESESAPGDFSLSVKF---GNDVQHFKVLRDGAGKYFL-WVVKFNSLNELVDY 79

Query: 393 HRHNSGGLASRL 404
           HR  S     ++
Sbjct: 80  HRSTSVSRNQQI 91

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 68.5 bits (167), Expect = 4e-13
 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 411 RPVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMK----EGTMSE 466
           +PV    G  +D ++I       LEELGSG FGVV R   + +  V + K       + +
Sbjct: 18  QPVEVKQGSVYDYYDI-------LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK 70

Query: 467 DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
                E  +M +L H  L+ L+        + ++ +
Sbjct: 71  YTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 106

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 7/46 (15%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHR 46
           +  G L + +   +  +  +   +++   Q C+G+ ++  H+ +H 
Sbjct: 108 LSGGELFDRIAAEDYKM--SEAEVINYMRQACEGLKHMHEHSIVHL 151

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.8 bits (152), Expect = 6e-13
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 4/78 (5%)

Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSLYTKVP--HPHVKHYHIKQN 312
           WY G + R+ AE  L    +  G F++R S +TKG Y+LS+         HVKHY I++ 
Sbjct: 8   WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 67

Query: 313 SRGEFFLSEKHCCHSIPE 330
             G ++++ +    ++ +
Sbjct: 68  DNGGYYITTRAQFETLQQ 85

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 9e-13
 Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 3/76 (3%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVP--HPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
             G F++R S +TKG Y+LS+         HVKHY I++   G ++++ +    ++ ++V
Sbjct: 28  PRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLV 87

Query: 391 NYHRHNSGGLASRLKT 406
            ++   + GL+SRL  
Sbjct: 88  QHYSERAAGLSSRLVV 103

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (151), Expect = 8e-13
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 109 KVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 168
           K+   +  R          V+A+Y + A    +LS  KG    VM+     WW+ +  NG
Sbjct: 18  KLLGPSSERATPAFHPVCQVIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQGE-ING 76

Query: 169 SVGYIPSNYVKE 180
             G  PSNYVK 
Sbjct: 77  VTGLFPSNYVKM 88

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (100), Expect = 7e-06
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
           V+A+Y + A    +LS  KG    VM+     WW+ +
Sbjct: 37  VIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQGE 73

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 9e-13
 Identities = 28/156 (17%), Positives = 46/156 (29%), Gaps = 49/156 (31%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           WY G +SRQ A ++L Q  + G F+VR+SST  G Y LS+        V HY I  +   
Sbjct: 2   WYWGRLSRQEAVALL-QGQRHGVFLVRDSSTSPGDYVLSVSEN---SRVSHYIINSSGPR 57

Query: 316 EFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEF 375
                                                                       
Sbjct: 58  PPVPPS------------------------------------------PAQPPPGVSPSR 75

Query: 376 FLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR 411
                    S+P ++ +++ +     + ++  P  R
Sbjct: 76  LRIGDQEFDSLPALLEFYKIHYLDTTTLIE--PVSR 109

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.5 bits (147), Expect = 9e-13
 Identities = 18/54 (33%), Positives = 31/54 (57%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK 181
            +A Y FKA    +LS ++G   +V+++  +  W   + NG  G+IP NY++ K
Sbjct: 3   AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMK 56

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (96), Expect = 1e-05
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG 115
            +A Y FKA    +LS ++G   +V+++  +  W   + NG
Sbjct: 3   AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNG 43

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.8 bits (152), Expect = 9e-13
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           +  VA+  + A+EG ++SL +G   EV+    + WW ++  +   GY PS Y+++
Sbjct: 15  EPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRK-DDVTGYFPSMYLQK 68

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 12/42 (28%), Positives = 24/42 (57%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKN 114
           +  VA+  + A+EG ++SL +G   EV+    + WW ++  +
Sbjct: 15  EPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDD 56

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (147), Expect = 1e-12
 Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 4/57 (7%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEV---MDDTQEHWWKVKDKNGSVGYIPSNYVK 179
            V+ AL+ ++     +L +++G    +    D+ +  WW  +  N   GY+P N + 
Sbjct: 5   GVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWAR-LNDKEGYVPRNLLG 60

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (106), Expect = 5e-07
 Identities = 12/64 (18%), Positives = 29/64 (45%), Gaps = 8/64 (12%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEV---MDDTQEHWWKVKDKNGIRKPDQMIRPKVVV 129
            V+ AL+ ++     +L +++G    +    D+ +  WW  +  +      +   P+ ++
Sbjct: 5   GVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLND-----KEGYVPRNLL 59

Query: 130 ALYP 133
            LYP
Sbjct: 60  GLYP 63

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (147), Expect = 1e-12
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
           +  +ALYP+ ++E GDL+  +G E  V       WW         G  PSNYVK K+
Sbjct: 9   EEYIALYPYSSVEPGDLTFTEGEEILVTQK-DGEWWTGS-IGDRSGIFPSNYVKPKD 63

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (96), Expect = 1e-05
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
           +  +ALYP+ ++E GDL+  +G E  V       WW   
Sbjct: 9   EEYIALYPYSSVEPGDLTFTEGEEILVTQK-DGEWWTGS 46

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 2e-12
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 9/82 (10%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYT-------KVPHPHVKHYH 308
           W+ G +S + AE +L ++ K G F+VR S +  G + LS+ T             V H  
Sbjct: 2   WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVM 61

Query: 309 IKQNSRGEFFLSEKHCCHSIPE 330
           I +    ++ +       S+ +
Sbjct: 62  I-RCQELKYDVGGGERFDSLTD 82

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 114

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.0 bits (150), Expect = 2e-12
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)

Query: 333 DKEGCFVVRNS-STKGLYTLSLYTKVPHPH-VKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
           +K G F++R S S KG ++LS+         VKHY I+    G +++S +    ++  +V
Sbjct: 33  NKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALV 92

Query: 391 NYHRHNSGGLASRLKTSPC 409
            ++     GL  +L   PC
Sbjct: 93  QHYSKKGDGLCQKLTL-PC 110

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 114

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.5 bits (146), Expect = 5e-12
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)

Query: 257 WYVGDMSRQRAESIL-KQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPH-VKHYHIKQNS 313
           W+   +SR+ AE  L    +K G F++R S S KG ++LS+         VKHY I+   
Sbjct: 14  WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLD 73

Query: 314 RGEFFLSEKHCCHSIPE 330
            G +++S +    ++  
Sbjct: 74  NGGYYISPRITFPTLQA 90

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.7 bits (147), Expect = 2e-12
 Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 7/77 (9%)

Query: 257 WYVGDMSRQRAESILKQE--DKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNS 313
           W+ G +SR +A  ++        G FV+R S T+ G   L+          KH  +  N 
Sbjct: 7   WFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNF---QGKAKHLRLSLNG 63

Query: 314 RGEFFLSEKHCCHSIPE 330
            G     +     S+ +
Sbjct: 64  HG-QCHVQHLWFQSVFD 79

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.2 bits (117), Expect = 3e-08
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 5/63 (7%)

Query: 333 DKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN 391
              G FV+R S T+ G   L+          KH  +  N  G     +     S+ +++ 
Sbjct: 27  RSHGLFVIRQSETRPGECVLTFNF---QGKAKHLRLSLNGHG-QCHVQHLWFQSVFDMLR 82

Query: 392 YHR 394
           +  
Sbjct: 83  HFH 85

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.7 bits (147), Expect = 2e-12
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVM---DDTQEHWWKVKDKNGSVGYIPSNYVKEKE 182
           +V  A+Y FKA    +LS+    + +++   D T    W + + NG  GY+PSNY+++ E
Sbjct: 14  QVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTE 73

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 11/87 (12%)

Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGS----IDVAM--MKEGTMSE----DDFIEEAKV 475
           I   +L LLE+LG G FGVVRRG+W       + VA+  +K   +S+    DDFI E   
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64

Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           M  L H+NL++LYGV     P+ +VT+
Sbjct: 65  MHSLDHRNLIRLYGVVL-TPPMKMVTE 90

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 5e-06
 Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQR-GIILEKPKAW 257
           + L    FS  SD W +GV +WE+FT G+ P+  L  ++++ ++ + G  L +P+  
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 240

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.2 bits (148), Expect = 2e-12
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 332 KDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
               G F+VR S S+ G  ++SL        V HY I   S G+ ++S +   +++ E+V
Sbjct: 23  SGINGSFLVRESESSPGQRSISLR---YEGRVYHYRINTASDGKLYVSSESRFNTLAELV 79

Query: 391 NYHRHNSGGLASRLKTSPCDRP 412
           ++H   + GL + L   P  + 
Sbjct: 80  HHHSTVADGLITTLHY-PAPKR 100

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.4 bits (146), Expect = 4e-12
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 6/81 (7%)

Query: 251 LEKPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHI 309
           LEK  +WY G +SR  AE +L      G F+VR S S+ G  ++SL        V HY I
Sbjct: 2   LEK-HSWYHGPVSRNAAEYLLSS-GINGSFLVRESESSPGQRSISLR---YEGRVYHYRI 56

Query: 310 KQNSRGEFFLSEKHCCHSIPE 330
              S G+ ++S +   +++ E
Sbjct: 57  NTASDGKLYVSSESRFNTLAE 77

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.5 bits (159), Expect = 2e-12
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 11/99 (11%)

Query: 412 PVPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS----IDVA--MMKEGTMS 465
           P  A    +    EID + + + + +G+G+FG V  G  +      I VA   +K G   
Sbjct: 12  PNEAVREFA---KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE 68

Query: 466 ED--DFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +   DF+ EA +M +  H N++ L GV +K  P+ I+T+
Sbjct: 69  KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITE 107

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.1 bits (119), Expect = 2e-07
 Identities = 20/54 (37%), Positives = 36/54 (66%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + + Y +F+S SDVW+YG++MWEV + G+ PY  + N +V++ +++   L  P 
Sbjct: 203 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPM 256

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 3e-12
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 5/80 (6%)

Query: 334 KEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
             G F++R S      Y LS+        V+HY I + + G   L+E     S+PE+VNY
Sbjct: 24  ATGAFLIRVSEKPSADYVLSVR---DTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNY 80

Query: 393 HRHNSGGLASRLKTSPCDRP 412
           HR  S     RL  +PC + 
Sbjct: 81  HRAQSLSHGLRL-AAPCRKH 99

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 3e-11
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 257 WYVGDMSRQRAESILKQED-KEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           W+ G +SR  A   L+ E    G F++R S      Y LS+        V+HY I + + 
Sbjct: 4   WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVR---DTQAVRHYKIWRRAG 60

Query: 315 GEFFLSEKHCCHSIPE 330
           G   L+E     S+PE
Sbjct: 61  GRLHLNEAVSFLSLPE 76

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 3e-12
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 5/79 (6%)

Query: 253 KPKAWYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQ 311
           K + W+  +++   AE++L     +G F+ R S S  G  TLS+     +  V H  I Q
Sbjct: 1   KSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVR---RNGAVTHIKI-Q 56

Query: 312 NSRGEFFLSEKHCCHSIPE 330
           N+   + L       ++ E
Sbjct: 57  NTGDYYDLYGGEKFATLAE 75

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 3e-09
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 12/92 (13%)

Query: 332 KDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
           +  +G F+ R S S  G  TLS+     +  V H  I QN+   + L       ++ E+V
Sbjct: 22  RGVDGSFLARPSKSNPGDLTLSVR---RNGAVTHIKI-QNTGDYYDLYGGEKFATLAELV 77

Query: 391 NYHRHNSG------GLASRLKTSPCDRPVPAT 416
            Y+  + G      G    LK  P +   P +
Sbjct: 78  QYYMEHHGQLKEKNGDVIELKY-PLNCADPTS 108

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.6 bits (142), Expect = 5e-12
 Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 4/57 (7%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEV--MDDTQEHWWKVKDKNGSVGYIPSNYVK 179
           PK V ALY F   E GDL   KG    +    D+Q  WW  +  NG  G  P+NYV+
Sbjct: 2   PKAV-ALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGR-VNGREGIFPANYVE 56

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]} Length = 131

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 60.8 bits (147), Expect = 5e-12
 Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG 315
              G M RQ     L+ +   G F++R S    G + ++         +KHY ++ N   
Sbjct: 11  IIYGYMGRQEVNDALQNQ-DPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTA 69

Query: 316 EFFLS 320
               +
Sbjct: 70  AAKKT 74

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]} Length = 131

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 2/80 (2%)

Query: 334 KEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
             G F++R S    G + ++         +KHY ++ N       +         + VN 
Sbjct: 29  DPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTAAAKKTFPDFLSEHSQFVNL 88

Query: 393 HRHNSGGLAS-RLKTSPCDR 411
            +       + R      D 
Sbjct: 89  LQWTKDTNGAPRFLKLHKDT 108

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 60.0 bits (145), Expect = 6e-12
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           K WY   ++R +AE +L +  ++G F+VR  +    Y +S         +KH  ++Q   
Sbjct: 9   KEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFR---AEGKIKHCRVQQE-- 63

Query: 315 GEFFLSEKHCCHSIPE 330
           G+  +       S+ +
Sbjct: 64  GQTVMLGNSEFDSLVD 79

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.7 bits (139), Expect = 4e-11
 Identities = 14/82 (17%), Positives = 35/82 (42%), Gaps = 6/82 (7%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
           ++G F+VR  +    Y +S         +KH  ++Q   G+  +       S+ ++++Y+
Sbjct: 30  RDGAFLVRKRNEPNSYAISFR---AEGKIKHCRVQQE--GQTVMLGNSEFDSLVDLISYY 84

Query: 394 RHNSGGLASRLKTSPCDRPVPA 415
             +      +L+  P +    +
Sbjct: 85  EKHPLYRKMKLRY-PINEENSS 105

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 6e-12
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 9/88 (10%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGS-----IDVAM--MKEGTMSED--DFIEEAK 474
            EI P+ +   + +G+G+FG V +G  + S     + VA+  +K G   +   DF+ EA 
Sbjct: 2   TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAG 61

Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +M +  H N+++L GV SK++P+ I+T+
Sbjct: 62  IMGQFSHHNIIRLEGVISKYKPMMIITE 89

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 4e-06
 Identities = 23/55 (41%), Positives = 35/55 (63%)

Query: 201 HQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
            + ++Y +F+S SDVW++G++MWEV T G+ PY  L N EV+  +  G  L  P 
Sbjct: 182 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPM 236

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 80

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.4 bits (141), Expect = 1e-11
 Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 4/59 (6%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKV----KDKNGSVGYIPSNYVKE 180
           ++      + A     LSL  G    ++      WW+     + K    G+ P+++VK 
Sbjct: 8   EIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKL 66

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 1e-11
 Identities = 22/157 (14%), Positives = 45/157 (28%), Gaps = 58/157 (36%)

Query: 256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           A Y G +SR+  E +L     +G +++R+S +  G+Y L +     H ++  Y + Q   
Sbjct: 5   AVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVL---YHGYIYTYRVSQTET 61

Query: 315 GEFFLSEKHCCHSIPEVKDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 374
           G +        H                                                
Sbjct: 62  GSWSAETAPGVHK----------------------------------------------- 74

Query: 375 FFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR 411
                      I  +++  +    G+   L+  P ++
Sbjct: 75  ------RYFRKIKNLISAFQKPDQGIVIPLQY-PVEK 104

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (152), Expect = 1e-11
 Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 9/87 (10%)

Query: 423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMK-------EGTMSEDDFIEEAKV 475
           +W ++  +  +   LG G+FG V   + + S  +  +K       E    E     E ++
Sbjct: 2   QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 59

Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTD 502
            + L+H N+++LYG       +Y++ +
Sbjct: 60  QSHLRHPNILRLYGYFHDATRVYLILE 86

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
           ++       K D+W+ GVL +E    GK P+      E   R+ R 
Sbjct: 175 MIEGRMHDEKVDLWSLGVLCYEFLV-GKPPFEANTYQETYKRISRV 219

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 63.5 bits (154), Expect = 1e-11
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 424 WEIDPAEL-MLLEELGSGQFGVVRRGKWRGS-IDVAM------MKEGTMSEDDFIEEAKV 475
           ++ DP +L   L E+G G FG V   +   +   VA+       K+      D I+E + 
Sbjct: 9   FKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRF 68

Query: 476 MTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           + +L+H N +Q  G   +    ++V +
Sbjct: 69  LQKLRHPNTIQYRGCYLREHTAWLVME 95

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 59

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.6 bits (139), Expect = 1e-11
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
           K   + Y F A    +LS+ K    E++DD +  WWKV++ +G  G++P+N +  
Sbjct: 2   KYAKSKYDFVARNSSELSVMKDDVLEILDD-RRQWWKVRNASGDSGFVPNNILDI 55

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 59

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.5 bits (92), Expect = 3e-05
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 73  KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIR 117
           K   + Y F A    +LS+ K    E++DD +  WWKV++ +G  
Sbjct: 2   KYAKSKYDFVARNSSELSVMKDDVLEILDD-RRQWWKVRNASGDS 45

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (153), Expect = 1e-11
 Identities = 17/83 (20%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 425 EIDPAELM-LLEELGSGQFGVVRRGKWRGSIDVAMMK----EGTMSEDDFIEEAKVMTRL 479
           +++P +   ++ ELG G FG V + + + +  +A  K    +     +D++ E  ++   
Sbjct: 7   DLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC 66

Query: 480 QHQNLVQLYGVCSKHRPIYIVTD 502
            H N+V+L         ++I+ +
Sbjct: 67  DHPNIVKLLDAFYYENNLWILIE 89

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 12/61 (19%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 199 LIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGII--LEKPKA 256
           ++ +      +  K+DVW+ G+ + E+    + P+  L    V+ ++ +     L +P  
Sbjct: 182 VMCETSKDRPYDYKADVWSLGITLIEMAE-IEPPHHELNPMRVLLKIAKSEPPTLAQPSR 240

Query: 257 W 257
           W
Sbjct: 241 W 241

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETK 49
              G++   +   E  L      +  +C Q    + YL  +  IHR+ K
Sbjct: 91  CAGGAVDAVMLELERPL--TESQIQVVCKQTLDALNYLHDNKIIHRDLK 137

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (140), Expect = 1e-11
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             AL  + A +   L+  K     V++  +  W+     +G  G+ P +YVK 
Sbjct: 13  AQALCSWTAKKDNHLNFSKHDIITVLEQQENWWFGE--VHGGRGWFPKSYVKI 63

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (95), Expect = 2e-05
 Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW-KVKDKNGI 116
             AL  + A +   L+  K     V++  +  W+ +V    G 
Sbjct: 13  AQALCSWTAKKDNHLNFSKHDIITVLEQQENWWFGEVHGGRGW 55

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.8 bits (142), Expect = 2e-11
 Identities = 19/75 (25%), Positives = 43/75 (57%), Gaps = 6/75 (8%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           W+   +SR +AE++L  +   G F++R S S+ G +++S+        V+H+ + ++++G
Sbjct: 8   WFHEGLSRHQAENLLMGK-DIGFFIIRASQSSPGDFSISV---RHEDDVQHFKVMRDTKG 63

Query: 316 EFFLSEKHCCHSIPE 330
            +FL  +    S+ +
Sbjct: 64  NYFLWTEK-FPSLNK 77

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.8 bits (124), Expect = 4e-09
 Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 5/65 (7%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
             G F++R S S+ G +++S+        V+H+ + ++++G +FL  +    S+ ++V+Y
Sbjct: 26  DIGFFIIRASQSSPGDFSISV---RHEDDVQHFKVMRDTKGNYFLWTEKF-PSLNKLVDY 81

Query: 393 HRHNS 397
           +R  S
Sbjct: 82  YRTTS 86

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.2 bits (153), Expect = 2e-11
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 5/83 (6%)

Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE-----GTMSEDDFIEEAKVMTRL 479
           E+   +   + ELG+G  GVV +   + S  V   K           +  I E +V+   
Sbjct: 2   ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 61

Query: 480 QHQNLVQLYGVCSKHRPIYIVTD 502
               +V  YG       I I  +
Sbjct: 62  NSPYIVGFYGAFYSDGEISICME 84

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 4e-04
 Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 2/75 (2%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGD 261
           + L  T +S +SD+W+ G+ + E+   G+ P     + + ++ +    +           
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAV-GRYPI-PPPDAKELELMFGCQVEGDAAETPPRP 230

Query: 262 MSRQRAESILKQEDK 276
            +  R  S    + +
Sbjct: 231 RTPGRPLSSYGMDSR 245

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (151), Expect = 2e-11
 Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVA---MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLY 488
             E++G G  G V       +  +VA   M  +    ++  I E  VM   ++ N+V   
Sbjct: 24  RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL 83

Query: 489 GVCSKHRPIYIVTD 502
                   +++V +
Sbjct: 84  DSYLVGDELWVVME 97

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 8/45 (17%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 204 LNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRG 248
           +    +  K D+W+ G++  E+   G+ PY        +  +   
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYLIATN 231

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 62.8 bits (152), Expect = 2e-11
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 4/74 (5%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVA---MMKEGTMSEDDFIEEAKVMTRLQHQNLVQLY 488
           + EELG+G FGVV R   R +  + A   +M      ++   +E + M+ L+H  LV L+
Sbjct: 30  IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 89

Query: 489 GVCSKHRPIYIVTD 502
                   + ++ +
Sbjct: 90  DAFEDDNEMVMIYE 103

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
           +V         +D+W+ GVL + + + G  P+G   + E +  V+         A+
Sbjct: 195 EVAEGKPVGYYTDMWSVGVLSYILLS-GLSPFGGENDDETLRNVKSCDWNMDDSAF 249

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.0 bits (150), Expect = 3e-11
 Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 9/88 (10%)

Query: 423 KWEIDPAELMLLE-ELGSGQFGVVRRGKWRGS---IDVAM--MKEGTMSED--DFIEEAK 474
           K  +    L++ + ELG G FG VR+G +R     IDVA+  +K+GT   D  + + EA+
Sbjct: 2   KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ 61

Query: 475 VMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           +M +L +  +V+L GVC     + +V +
Sbjct: 62  IMHQLDNPYIVRLIGVCQAE-ALMLVME 88

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 8e-08
 Identities = 23/56 (41%), Positives = 38/56 (67%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
           + +N+ +FSS+SDVW+YGV MWE  + G+ PY ++K  EV+  +++G  +E P   
Sbjct: 182 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPEC 237

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 6e-04
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 1   MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETK 49
              G L  +L      +   V  + ++  QV  GM YLE  N++HR+  
Sbjct: 90  AGGGPLHKFLVGKREEI--PVSNVAELLHQVSMGMKYLEEKNFVHRDLA 136

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (141), Expect = 3e-11
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 257 WYVGDMSRQRAESILKQEDK-EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           W+ G +SR+ +E I+    K  G F++R     G Y L L        V HY I ++  G
Sbjct: 31  WFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLL---HEGKVLHYRIDKDKTG 87

Query: 316 EFFLSEKHCCHSIPE 330
           +  + E     ++ +
Sbjct: 88  KLSIPEGKKFDTLWQ 102

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (140), Expect = 4e-11
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH 393
             G F++R     G Y L L        V HY I ++  G+  + E     ++ ++V ++
Sbjct: 51  TNGKFLIRARDNNGSYALCLL---HEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHY 107

Query: 394 RHNSGGLASRLKTSPCDR 411
            + + GL   L   PC +
Sbjct: 108 SYKADGLLRVLTV-PCQK 124

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.4 bits (136), Expect = 4e-11
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 6/61 (9%)

Query: 126 KVVVALYPFKAIE-GGDLSLEKGAEYEVMDDT-----QEHWWKVKDKNGSVGYIPSNYVK 179
           +   ALY F       +++L+KG    ++           WWKV+ KNG++GYIP NY++
Sbjct: 6   EFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIE 65

Query: 180 E 180
            
Sbjct: 66  I 66

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (149), Expect = 4e-11
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 13/94 (13%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID----------VAMMKEGTMSED--DF 469
            +WE+    L+L + LG G FG V   +  G             V M+K     +D  D 
Sbjct: 6   PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL 65

Query: 470 IEEAKVMTRL-QHQNLVQLYGVCSKHRPIYIVTD 502
           I E ++M  + +H+N++ L G C++  P+Y++ +
Sbjct: 66  ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE 99

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 1e-07
 Identities = 19/57 (33%), Positives = 33/57 (57%)

Query: 201 HQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
            + L    ++ +SDVW++GVL+WE+FT G  PY  +   E+   ++ G  ++KP   
Sbjct: 206 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNC 262

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.7 bits (139), Expect = 4e-11
 Identities = 17/80 (21%), Positives = 38/80 (47%), Gaps = 3/80 (3%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKH-CCHSIPEVVN 391
            +G F++R+S S    + L+L       + +    + + +  F L + +     + ++V+
Sbjct: 27  VDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLVD 86

Query: 392 YHRHNSGGLASRLKTSPCDR 411
           +++ N G L  +LK   C R
Sbjct: 87  FYQLNKGVLPCKLKH-HCIR 105

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (134), Expect = 2e-10
 Identities = 16/79 (20%), Positives = 38/79 (48%), Gaps = 3/79 (3%)

Query: 255 KAWYVGDMSRQRAESILKQEDK-EGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQN 312
           + W+ G +SR+ +  I+KQ+   +G F++R+S S    + L+L       + +    + +
Sbjct: 5   QHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDD 64

Query: 313 SRGEFFLSEKH-CCHSIPE 330
            +  F L + +     + +
Sbjct: 65  GQTFFSLDDGNTKFSDLIQ 83

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.2 bits (148), Expect = 4e-11
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM----MKEGTMSEDDFIEEAKVMTRLQHQNLVQL 487
           L++ LG G +G V+    R +   VA+    MK      ++  +E  +   L H+N+V+ 
Sbjct: 9   LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 68

Query: 488 YGVCSKHRPIYIVTD 502
           YG   +    Y+  +
Sbjct: 69  YGHRREGNIQYLFLE 83

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 61.2 bits (148), Expect = 5e-11
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 5/75 (6%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM----MKEGTMSEDDFIEEAKVMTRLQHQNLVQL 487
             + LG+G F  V   + + +   VA+     K     E     E  V+ +++H N+V L
Sbjct: 13  FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVAL 72

Query: 488 YGVCSKHRPIYIVTD 502
             +      +Y++  
Sbjct: 73  DDIYESGGHLYLIMQ 87

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 10/56 (17%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
           +VL    +S   D W+ GV+ + +   G  P+    + ++ +++ +         W
Sbjct: 179 EVLAQKPYSKAVDCWSIGVIAYILLC-GYPPFYDENDAKLFEQILKAEYEFDSPYW 233

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 61.0 bits (147), Expect = 7e-11
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID--------VAMMKEGTMS--EDDFIE 471
              E     +  + ++G G FG V + +  G +         V M+KE   +  + DF  
Sbjct: 6   LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQR 65

Query: 472 EAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
           EA +M    + N+V+L GVC+  +P+ ++ +
Sbjct: 66  EAALMAEFDNPNIVKLLGVCAVGKPMCLLFE 96

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.7 bits (115), Expect = 8e-07
 Identities = 23/55 (41%), Positives = 37/55 (67%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
            + Y R++++SDVWAYGV++WE+F+ G  PY  + + EV+  V+ G IL  P+  
Sbjct: 213 SIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENC 267

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 111

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.9 bits (137), Expect = 7e-11
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 7/78 (8%)

Query: 255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYHIKQN 312
             WY GD+SR+     L+    +G F+VR++STK  G YTL+L     +  +K +H    
Sbjct: 11  AEWYWGDISREEVNEKLRDT-ADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFH---- 65

Query: 313 SRGEFFLSEKHCCHSIPE 330
             G++  S+    +S+ E
Sbjct: 66  RDGKYGFSDPLTFNSVVE 83

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 111

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.3 bits (125), Expect = 3e-09
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 12/85 (14%)

Query: 334 KEGCFVVRNSSTK--GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN 391
            +G F+VR++STK  G YTL+L     +  +K +H      G++  S+    +S+ E++N
Sbjct: 31  ADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFH----RDGKYGFSDPLTFNSVVELIN 86

Query: 392 YHRHNS-----GGLASRLKTSPCDR 411
           ++R+ S       L  +L   P  +
Sbjct: 87  HYRNESLAQYNPKLDVKLLY-PVSK 110

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.9 bits (147), Expect = 7e-11
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 10/80 (12%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM---------MKEGTMSEDDFIEEAKVMTRLQHQ 482
             EELGSGQF VV++ + + + +  A               +S +D   E  ++  +QH 
Sbjct: 14  TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73

Query: 483 NLVQLYGVCSKHRPIYIVTD 502
           N++ L+ V      + ++ +
Sbjct: 74  NVITLHEVYENKTDVILILE 93

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 0.002
 Identities = 10/55 (18%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
           ++NY     ++D+W+ GV+ + + + G  P+      E +  V       + + +
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTKQETLANVSAVNYEFEDEYF 240

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 8e-11
 Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD---FIEEAKVMTRLQHQNLVQLYG 489
           + E+LG G+FG+V R     S    M K   +   D     +E  ++   +H+N++ L+ 
Sbjct: 9   IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHE 68

Query: 490 VCSKHRPIYIVTD 502
                  + ++ +
Sbjct: 69  SFESMEELVMIFE 81

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 1e-04
 Identities = 11/77 (14%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 181 KELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE 240
           ++L     +  +         +V  +   S+ +D+W+ G L++ + + G  P+    N +
Sbjct: 152 RQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINPFLAETNQQ 210

Query: 241 VVDRVQRGIILEKPKAW 257
           +++ +         +A+
Sbjct: 211 IIENIMNAEYTFDEEAF 227

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.3 bits (135), Expect = 1e-10
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 10/65 (15%)

Query: 128 VVALYPFKA-----IEGGDLSLEKGAEYEVMDDTQEHWWKVK-----DKNGSVGYIPSNY 177
           + AL+ +            LS   G    V+D   E WW+ +      +   +G+IPS  
Sbjct: 4   IRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKR 63

Query: 178 VKEKE 182
             E+ 
Sbjct: 64  RVERR 68

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 1e-10
 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 7/79 (8%)

Query: 430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMT--RLQHQNLVQL 487
            ++L E +G G+FG V RGKWRG   VA+    +  E  +  EA++     L+H+N++  
Sbjct: 4   TIVLQESIGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREAEIYQTVMLRHENILGF 62

Query: 488 YGVCSK----HRPIYIVTD 502
               +K       +++V+D
Sbjct: 63  IAADNKDNGTWTQLWLVSD 81

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 2e-10
 Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 6/79 (7%)

Query: 334 KEGCFVVRNSSTKGL-YTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
           ++G F+VR S+     Y L +        V HY +     G   + E     ++ ++V +
Sbjct: 24  EDGLFLVRESARHPGDYVLCVS---FGRDVIHYRVLHRD-GHLTIDEAVFFCNLMDMVEH 79

Query: 393 HRHNSGGLASRLKTSPCDR 411
           +  + G + ++L   P  +
Sbjct: 80  YSKDKGAICTKLVR-PKRK 97

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 8e-10
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 6/75 (8%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGL-YTLSLYTKVPHPHVKHYHIKQNSRG 315
           W+ G +S Q A   L Q  ++G F+VR S+     Y L +        V HY +     G
Sbjct: 6   WFHGKISGQEAVQQL-QPPEDGLFLVRESARHPGDYVLCVS---FGRDVIHYRVLHRD-G 60

Query: 316 EFFLSEKHCCHSIPE 330
              + E     ++ +
Sbjct: 61  HLTIDEAVFFCNLMD 75

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (142), Expect = 3e-10
 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 8/86 (9%)

Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGS---IDVAM--MKEGTMSED--DFIEEAKVMT 477
            +D  ++   + +G G FG V + + +     +D A+  MKE    +D  DF  E +V+ 
Sbjct: 6   VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 65

Query: 478 RL-QHQNLVQLYGVCSKHRPIYIVTD 502
           +L  H N++ L G C     +Y+  +
Sbjct: 66  KLGHHPNIINLLGACEHRGYLYLAIE 91

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 2e-07
 Identities = 22/57 (38%), Positives = 37/57 (64%)

Query: 201 HQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
            + LNY+ +++ SDVW+YGVL+WE+ + G  PY  +   E+ +++ +G  LEKP   
Sbjct: 195 IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 251

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 58.7 bits (141), Expect = 3e-10
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAM-----MKEGTMSEDDFIEEAKVMTRLQHQNLVQL 487
            LE++G G +GVV + +       A+      KE        I E  ++  L+H N+V+L
Sbjct: 6   GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65

Query: 488 YGVCSKHRPIYIV 500
           Y V    + + +V
Sbjct: 66  YDVIHTKKRLVLV 78

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 4e-10
 Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 13/108 (12%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG 315
            + G +SR++A+ +L     EG +++R S  + G YTL+L          +Y +  +  G
Sbjct: 37  EFHGIISREQADELLGG--VEGAYILRESQRQPGCYTLALRFG---NQTLNYRLFHD--G 89

Query: 316 EFFLSEKHCCHSIPE-VKDKEGCFVVRNSSTKGLYTLS---LYTKVPH 359
           + F+ EK    SI + V D      +   + + +  ++   +Y  + +
Sbjct: 90  KHFVGEKRFE-SIHDLVTDGLITLYIETKAAEYISKMTTNPIYEHIGY 136

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (108), Expect = 1e-06
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 13/93 (13%)

Query: 332 KDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
              EG +++R S  + G YTL+L          +Y +  +  G+ F+ EK    SI ++V
Sbjct: 52  GGVEGAYILRESQRQPGCYTLALRFG---NQTLNYRLFHD--GKHFVGEKRFE-SIHDLV 105

Query: 391 -----NYHRHNSGGLA-SRLKTSPCDRPVPATA 417
                  +         S++ T+P    +    
Sbjct: 106 TDGLITLYIETKAAEYISKMTTNPIYEHIGYAT 138

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 5e-10
 Identities = 16/78 (20%), Positives = 38/78 (48%), Gaps = 8/78 (10%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDD---FIEEAKVMTRLQHQNLVQ 486
           +L  +G+G +G  ++ + +     +    +  G+M+E +    + E  ++  L+H N+V+
Sbjct: 8   VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 67

Query: 487 LYGVC--SKHRPIYIVTD 502
            Y       +  +YIV +
Sbjct: 68  YYDRIIDRTNTTLYIVME 85

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 1e-05
 Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
            +N   ++ KSD+W+ G L++E+      P+      E+  +++ G     P  +
Sbjct: 185 QMNRMSYNEKSDIWSLGCLLYELCA-LMPPFTAFSQKELAGKIREGKFRRIPYRY 238

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 5e-10
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVM--DDTQEHWWKVKDKNGSVGYIPSNYVKE 180
                ALYPF+A    ++S   G   +V      +  W       G+ G+ P NYV++
Sbjct: 5   SSGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGS-FQGNFGWFPCNYVEK 61

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 5e-10
 Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 7/85 (8%)

Query: 425 EIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVA---MMKEGTMSEDD---FIEEAKVMT 477
           +  P +    + LG G F  V   +   +  + A   + K   + E+       E  VM+
Sbjct: 4   KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63

Query: 478 RLQHQNLVQLYGVCSKHRPIYIVTD 502
           RL H   V+LY        +Y    
Sbjct: 64  RLDHPFFVKLYFTFQDDEKLYFGLS 88

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (126), Expect = 6e-10
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK 179
            VA+  + A+EG ++SL +G   EV+    + WW ++ K+   GY PS Y++
Sbjct: 3   YVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR-KDDVTGYFPSMYLQ 53

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (87), Expect = 2e-04
 Identities = 12/37 (32%), Positives = 22/37 (59%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
            VA+  + A+EG ++SL +G   EV+    + WW ++
Sbjct: 3   YVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR 39

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (131), Expect = 7e-10
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 9/84 (10%)

Query: 334 KEGCFVVRNS-STKGLYTLSLYTKVPHPHVKHYHIKQNSRGE---FFLSEKHCCH-SIPE 388
            +G F+VR S      + LSL        VKHY I  +       F + +       + +
Sbjct: 32  VDGLFLVRESQRNPQGFVLSLCHL---QKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQ 88

Query: 389 VVNYHRHNSGGLASRLKTSPCDRP 412
           +V +H+ N G L   L+   C R 
Sbjct: 89  LVEFHQLNRGILPCLLRH-CCTRV 111

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.9 bits (127), Expect = 8e-10
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 126 KVVVALYPFKAIEGGD-LSLEKGAEYEVMDDTQEH--WWKVKDKNGSVGYIPSNYVKE 180
           + V  ++P  A      LS  +G    ++   ++    +   D   + G+ PS+Y K 
Sbjct: 8   QKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKL 65

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 1e-09
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 10/86 (11%)

Query: 426 IDPAELMLLE-ELGSGQFGVVRRGKWRGS-----IDVAMMKEGTMSE---DDFIEEAKVM 476
           +D   L L + ELGSG FG V++G ++       + V ++K         D+ + EA VM
Sbjct: 3   LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 62

Query: 477 TRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +L +  +V++ G+C +     +V +
Sbjct: 63  QQLDNPYIVRMIGIC-EAESWMLVME 87

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (124), Expect = 5e-08
 Identities = 25/55 (45%), Positives = 37/55 (67%)

Query: 203 VLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
            +NY +FSSKSDVW++GVLMWE F+ G+ PY  +K +EV   +++G  +  P   
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 235

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.2 bits (125), Expect = 1e-09
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 7/63 (11%)

Query: 124 RPKVVV-----ALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVK-DKNGSVGYIPSN 176
            PK+ V      + P     G  L L  G   E+   + + +WW+ +      VG+ P N
Sbjct: 4   MPKMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCN 63

Query: 177 YVK 179
            V 
Sbjct: 64  RVH 66

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.5 bits (79), Expect = 0.002
 Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 9/66 (13%)

Query: 71  RPKVVV-----ALYPFKAIEGGDLSLEKGAEYEVMD-DTQEHWWKVKDKNGIRK---PDQ 121
            PK+ V      + P     G  L L  G   E+   + + +WW+ ++         P  
Sbjct: 4   MPKMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCN 63

Query: 122 MIRPKV 127
            + P V
Sbjct: 64  RVHPYV 69

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.4 bits (125), Expect = 1e-09
 Identities = 7/61 (11%), Positives = 25/61 (40%), Gaps = 5/61 (8%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK-----NGSVGYIPSNYVK 179
              +  +  + A++  ++ + +G   +V+   Q++   V          + G++P + + 
Sbjct: 7   GSTMTVIKDYYALKENEICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILA 66

Query: 180 E 180
            
Sbjct: 67  P 67

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.3 bits (91), Expect = 6e-05
 Identities = 6/51 (11%), Positives = 19/51 (37%)

Query: 72  PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQM 122
              +  +  + A++  ++ + +G   +V+   Q++   V        P   
Sbjct: 7   GSTMTVIKDYYALKENEICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAE 57

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 2e-09
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 7/64 (10%)

Query: 124 RPKVVVALYPFKAIEG------GDLSLEKGAEYEVMDDTQEHW-WKVKDKNGSVGYIPSN 176
           +  + VA Y +   +G       +L L  G    V  D  E   ++ +  +G  G +PSN
Sbjct: 16  KVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSN 75

Query: 177 YVKE 180
           +V  
Sbjct: 76  FVDF 79

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 2e-09
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 9/84 (10%)

Query: 426 IDPAELMLLEELGSGQFGVVRRGKWRGS-----IDVAM--MKEGTM--SEDDFIEEAKVM 476
           +   E   ++ LGSG FG V +G W        I VA+  ++E T   +  + ++EA VM
Sbjct: 6   LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65

Query: 477 TRLQHQNLVQLYGVCSKHRPIYIV 500
             + + ++ +L G+C       I 
Sbjct: 66  ASVDNPHVCRLLGICLTSTVQLIT 89

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (116), Expect = 5e-07
 Identities = 17/56 (30%), Positives = 33/56 (58%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
           + + +  ++ +SDVW+YGV +WE+ T G  PY  +  +E+   +++G  L +P   
Sbjct: 183 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 238

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 83

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.3 bits (125), Expect = 2e-09
 Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 14/69 (20%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVM-----DDTQEHWWK---------VKDKNGSVGYI 173
           V A + + A +  +L L+ G    V+     ++  E W            K+     G  
Sbjct: 15  VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVF 74

Query: 174 PSNYVKEKE 182
           P N+ +  +
Sbjct: 75  PENFTERVQ 83

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 2e-09
 Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 12/93 (12%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGS--------IDVAMMKEGTMSEDD---FI 470
            KWE     L L + LG G FG V      G         + V M+KEG    +      
Sbjct: 6   SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 65

Query: 471 EEAKVMTRLQHQNLVQLYGVC-SKHRPIYIVTD 502
           E   ++    H N+V L G C     P+ ++ +
Sbjct: 66  ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVE 98

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 2e-09
 Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 10/82 (12%)

Query: 431 LMLLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDD---FIEEAKVMTRLQHQNL 484
           L    E+G G F  V +G    + ++VA   +++  +++ +   F EEA+++  LQH N+
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 70

Query: 485 VQLYGVC----SKHRPIYIVTD 502
           V+ Y          + I +VT+
Sbjct: 71  VRFYDSWESTVKGKKCIVLVTE 92

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 208 RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAWYVGDMSRQRA 267
           ++    DV+A+G+ M E+ T  + PY   +N   + R     +    K      ++    
Sbjct: 188 KYDESVDVYAFGMCMLEMAT-SEYPYSECQNAAQIYR----RVTSGVKPASFDKVAIPEV 242

Query: 268 ESILKQ 273
           + I++ 
Sbjct: 243 KEIIEG 248

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.3 bits (135), Expect = 2e-09
 Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 7/77 (9%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDD----FIEEAKVMTRLQHQNLV 485
           +L  LG+G FG V   + R +    AM  +K+  +          +E  +++ + H  ++
Sbjct: 8   ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFII 67

Query: 486 QLYGVCSKHRPIYIVTD 502
           +++G     + I+++ D
Sbjct: 68  RMWGTFQDAQQIFMIMD 84

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 3e-09
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 9/79 (11%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDD------FIEEAKVMTRLQHQN 483
            L+ LG GQF  V + + + +   VA+  +K G  SE         + E K++  L H N
Sbjct: 2   KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPN 61

Query: 484 LVQLYGVCSKHRPIYIVTD 502
           ++ L         I +V D
Sbjct: 62  IIGLLDAFGHKSNISLVFD 80

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 3e-09
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 9/75 (12%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           W+ G +SR+ AE++L+     G F+VR S+T  G Y L+          +  H+      
Sbjct: 9   WFHGKLSRREAEALLQ---LNGDFLVRESTTTPGQYVLTGLQ-----SGQPKHLLLVDPE 60

Query: 316 EFFLSEKHCCHSIPE 330
               ++ H   S+  
Sbjct: 61  GVVRTKDHRFESVSH 75

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.3 bits (120), Expect = 2e-08
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 6/82 (7%)

Query: 334 KEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
             G F+VR S+T  G Y L+          +  H+          ++ H   S+  +++Y
Sbjct: 25  LNGDFLVRESTTTPGQYVLTGLQ-----SGQPKHLLLVDPEGVVRTKDHRFESVSHLISY 79

Query: 393 HRHNSGGLASRLKTSPCDRPVP 414
           H  N   + S        +PV 
Sbjct: 80  HMDNHLPIISAGSELCLQQPVE 101

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.3 bits (120), Expect = 4e-09
 Identities = 8/52 (15%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQE--HWWKVKDKNGSVGYIPSNYVK 179
            LY +   +  ++++  G +  ++             D  G  G +P+ Y++
Sbjct: 4   VLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR 55

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 55.1 bits (132), Expect = 5e-09
 Identities = 20/81 (24%), Positives = 27/81 (33%), Gaps = 11/81 (13%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM------MKEGTMSEDDFIEEAKVMTRLQHQNLV 485
           L E LG G    V   +      DVA+      +         F  EA+    L H  +V
Sbjct: 11  LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 70

Query: 486 QLYGVCSKHRP----IYIVTD 502
            +Y       P     YIV +
Sbjct: 71  AVYDTGEAETPAGPLPYIVME 91

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.3 bits (120), Expect = 5e-09
 Identities = 11/53 (20%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE 180
             A+  ++   G +++L  G   EV++ ++  WW  +      G+IP+++++ 
Sbjct: 5   YRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQ-MKAKRGWIPASFLEP 56

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (84), Expect = 4e-04
 Identities = 8/37 (21%), Positives = 19/37 (51%)

Query: 75  VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK 111
             A+  ++   G +++L  G   EV++ ++  WW  +
Sbjct: 5   YRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQ 41

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 5e-09
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGE 316
           W+ G +SR+ AE++L +    G F++R S +   YTLS           H+ +K    G 
Sbjct: 11  WFHGAISREDAENLL-ESQPLGSFLIRVSHSHVGYTLSYK---AQSSCCHFMVKLLDDGT 66

Query: 317 FFL-SEKHCCHSIPEV 331
           F +  EK    S+  +
Sbjct: 67  FMIPGEKVAHTSLDAL 82

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 2e-08
 Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 332 KDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCH-SIPEVV 390
               G F++R S +   YTLS           H+ +K    G F +  +   H S+  +V
Sbjct: 27  SQPLGSFLIRVSHSHVGYTLSYK---AQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALV 83

Query: 391 NYHRHNSGGLASRLKTSPCDRP 412
            +H+         L T PC + 
Sbjct: 84  TFHQQKPIEPRRELLTQPCRQK 105

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 6e-09
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG 315
           W+ G ++R++AE +L    + G F+VR S+   G YTL +        V+HY I  ++  
Sbjct: 6   WFHGKITREQAERLLYPP-ETGLFLVRESTNYPGDYTLCVSC---EGKVEHYRIMYHASK 61

Query: 316 EFFLSEKHCCHSIPE 330
              + E+    ++ +
Sbjct: 62  -LSIDEEVYFENLMQ 75

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 8e-09
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 6/82 (7%)

Query: 332 KDKEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVV 390
             + G F+VR S+   G YTL +        V+HY I  ++     + E+    ++ ++V
Sbjct: 22  PPETGLFLVRESTNYPGDYTLCVSC---EGKVEHYRIMYHASK-LSIDEEVYFENLMQLV 77

Query: 391 NYHRHNSGGLASRLKTSPCDRP 412
            ++  ++ GL +RL   P    
Sbjct: 78  EHYTTDADGLCTRLIK-PKVME 98

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]} Length = 112

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 6e-09
 Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 2/75 (2%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRG 315
            Y G M +  AE++L+ +  EG F++R+S+    L+++S        H +      N   
Sbjct: 13  CYWGVMDKYAAEALLEGK-PEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSF 71

Query: 316 EFFLSEKHCCHSIPE 330
           +           I  
Sbjct: 72  DAHDPCVFHSPDITG 86

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]} Length = 112

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 5e-08
 Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 334 KEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNY 392
            EG F++R+S+    L+++S        H +      N   +           I  ++ +
Sbjct: 31  PEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEH 90

Query: 393 HRHNSGGLASR-LKTSPCDRP 412
           ++  S  +    L ++P  R 
Sbjct: 91  YKDPSACMFFEPLLSTPLIRT 111

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.2 bits (125), Expect = 6e-09
 Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNS--STKGLYTLSLYTKVPHPHVKHYHIKQNSR 314
           + +G +S++R  +IL  +   G F++R S  S +G  T +   K      +   ++  ++
Sbjct: 9   YIMGFISKERERAILSTK-PPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVEPYTK 67

Query: 315 GEF 317
            + 
Sbjct: 68  QQL 70

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 7e-09
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 10/74 (13%)

Query: 127 VVVALYPFKAIEGGDLSLEKGAEYEV---MDDTQEHWWKV-------KDKNGSVGYIPSN 176
           + VAL  + A +   L++ +G    V   +      +W          D    +GY PS+
Sbjct: 23  MAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSS 82

Query: 177 YVKEKELLGLQKYD 190
            V+E + L   K D
Sbjct: 83  IVREDQTLKPGKVD 96

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 0.001
 Identities = 8/40 (20%), Positives = 16/40 (40%), Gaps = 3/40 (7%)

Query: 74  VVVALYPFKAIEGGDLSLEKGAEYEV---MDDTQEHWWKV 110
           + VAL  + A +   L++ +G    V   +      +W  
Sbjct: 23  MAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGG 62

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 2e-08
 Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 8/78 (10%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDD-----FIEEAKVMTRLQHQNL 484
           L + LG G FG V   +++ +    A+  +K+  +  DD      +E+  +    +H  L
Sbjct: 6   LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 65

Query: 485 VQLYGVCSKHRPIYIVTD 502
             ++        ++ V +
Sbjct: 66  THMFCTFQTKENLFFVME 83

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 2e-08
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 11/81 (13%)

Query: 257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSR- 314
           WY G M+   A+  LK+   EG F++R+SS    L T+S+ T        +  I+     
Sbjct: 17  WYWGSMTVNEAKEKLKE-APEGTFLIRDSSHSDYLLTISVKT---SAGPTNLRIEYQDGK 72

Query: 315 -----GEFFLSEKHCCHSIPE 330
                     S+     S+  
Sbjct: 73  FRLDSIICVKSKLKQFDSVVH 93

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 2e-08
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 11/90 (12%)

Query: 424 WEIDPAELML--LEELGSGQFGVVRRGKWRGS----IDVAM--MKEGTMSED--DFIEEA 473
             I P+ L++   E +G G FG V  G    +    I  A+  +   T   +   F+ E 
Sbjct: 20  VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEG 79

Query: 474 KVMTRLQHQNLVQLYGVCSKHR-PIYIVTD 502
            +M    H N++ L G+C +      +V  
Sbjct: 80  IIMKDFSHPNVLSLLGICLRSEGSPLVVLP 109

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.6 bits (115), Expect = 7e-07
 Identities = 19/54 (35%), Positives = 34/54 (62%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPK 255
           + L   +F++KSDVW++GVL+WE+ T G  PY  +   ++   + +G  L +P+
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 257

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 2e-08
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 6/87 (6%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSED---DFIEEAKVMTRLQHQNLVQ 486
            +E++G G +GVV + + + +   VA+  ++  T +E      I E  ++  L H N+V+
Sbjct: 6   KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65

Query: 487 LYGVCSKHRPIYIVTDTSSFRLGLLAD 513
           L  V      +Y+V +     L    D
Sbjct: 66  LLDVIHTENKLYLVFEFLHQDLKKFMD 92

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 3e-08
 Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 7/90 (7%)

Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDD---FIEE 472
           L+   WE+ P     L  +GSG +G V       + + VA+  +     S         E
Sbjct: 9   LNKTIWEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE 67

Query: 473 AKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +++  ++H+N++ L  V +  R +    D
Sbjct: 68  LRLLKHMKHENVIGLLDVFTPARSLEEFND 97

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 4e-08
 Identities = 17/88 (19%), Positives = 39/88 (44%), Gaps = 11/88 (12%)

Query: 424 WEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAM----MKEGTMSEDDFIEEAKVMTR 478
           +++ P     L  +G G +G+V       + + VA+      E        + E K++ R
Sbjct: 4   FDVGP-RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 62

Query: 479 LQHQNLVQLYGVC-----SKHRPIYIVT 501
            +H+N++ +  +       + + +Y+VT
Sbjct: 63  FRHENIIGINDIIRAPTIEQMKDVYLVT 90

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 6e-08
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 413 VPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEE 472
           V AT G   D+ +         + +G+G FGVV + K   S ++  +K+    +     E
Sbjct: 6   VVATPGQGPDRPQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE 63

Query: 473 AKVMTRLQHQNLVQLYGVC 491
            ++M +L H N+V+L    
Sbjct: 64  LQIMRKLDHCNIVRLRYFF 82

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (122), Expect = 7e-08
 Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 6/76 (7%)

Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDD------FIEEAKVMTRLQHQNLVQ 486
            LE++G G +G V + K R + ++  +K   + +DD       + E  ++  L+H+N+V+
Sbjct: 6   KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65

Query: 487 LYGVCSKHRPIYIVTD 502
           L+ V    + + +V +
Sbjct: 66  LHDVLHSDKKLTLVFE 81

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 1e-07
 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 6/80 (7%)

Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAMMK------EGTMSEDDFIEEAKVMTRLQHQNLVQ 486
            L ++G G FG V + + R +     +K      E        + E K++  L+H+N+V 
Sbjct: 14  KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 73

Query: 487 LYGVCSKHRPIYIVTDTSSF 506
           L  +C      Y     S +
Sbjct: 74  LIEICRTKASPYNRCKGSIY 93

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 1e-07
 Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 7/90 (7%)

Query: 419 LSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDD---FIEE 472
           ++   WE+  A    L+ +GSG +G V       +   VA+  +     SE        E
Sbjct: 9   VTKTAWEV-RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRE 67

Query: 473 AKVMTRLQHQNLVQLYGVCSKHRPIYIVTD 502
            +++  ++H+N++ L  V +    +   TD
Sbjct: 68  LRLLKHMRHENVIGLLDVFTPDETLDDFTD 97

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 2e-07
 Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 7/74 (9%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVA---MMKEGTMSEDD---FIEEAKVMTRLQHQNLV 485
            L+ LG G FG V   + + +    A   + KE  +++D+    + E++V+   +H  L 
Sbjct: 9   YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68

Query: 486 QLYGVCSKHRPIYI 499
            L      H  +  
Sbjct: 69  ALKYAFQTHDRLCF 82

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.3 bits (117), Expect = 5e-07
 Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 10/80 (12%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM---------MKEGTMSEDDFIEEAKVMTRLQHQ 482
           +   +G G FG V   +   +    AM         MK+G     +      +++     
Sbjct: 8   VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 67

Query: 483 NLVQLYGVCSKHRPIYIVTD 502
            +V +         +  + D
Sbjct: 68  FIVCMSYAFHTPDKLSFILD 87

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 6e-07
 Identities = 14/69 (20%), Positives = 19/69 (27%), Gaps = 16/69 (23%)

Query: 128 VVALYPFKAIEGGDLSLEKGAEYEVM---------------DDTQEHWWKVK-DKNGSVG 171
             ALY +K     D+ L  G    V                   +  W     +  G  G
Sbjct: 6   YRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERG 65

Query: 172 YIPSNYVKE 180
             P  YV+ 
Sbjct: 66  DFPGTYVEY 74

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 44.9 bits (106), Expect = 1e-06
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 9/62 (14%)

Query: 128 VVALYPFKAIE-------GGDLSLEKGAEYEVMDDTQEHWW--KVKDKNGSVGYIPSNYV 178
           V     + A +       G  +S E      V +     WW  ++  +   +G+IPS   
Sbjct: 24  VRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVK 83

Query: 179 KE 180
            E
Sbjct: 84  LE 85

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.9 bits (113), Expect = 1e-06
 Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM-MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGV 490
           L  ++GSG FG +  G    +  +VA+ ++           E+K+   +Q    +     
Sbjct: 11  LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRW 70

Query: 491 CSKHRPIYIVT 501
           C       ++ 
Sbjct: 71  CGAEGDYNVMV 81

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 47.1 bits (111), Expect = 2e-06
 Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAMMKEGTMSEDDFIEEAKVMTRLQ-HQNLVQLYGV 490
           L+ +LG G++  V       +   V +     + +     E K++  L+   N++ L  +
Sbjct: 39  LVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADI 98

Query: 491 C--SKHRPIYIVTD 502
                 R   +V +
Sbjct: 99  VKDPVSRTPALVFE 112

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]} Length = 92

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 3e-06
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 125 PKVVVALYPFKAIEGGDLSLEKGAEYEVM---DDTQEHWWKVKDKNGSVGYIPSNYVK 179
            K+  A   F A +  D+SL +G    V+   D        + D   + G++ S+++K
Sbjct: 17  EKLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLK 74

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (110), Expect = 3e-06
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 6/76 (7%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDD---FIEEAKVMTRLQHQNLVQ 486
            L+ +GSG  G+V          +VA+  +     ++        E  +M  + H+N++ 
Sbjct: 21  NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80

Query: 487 LYGVCSKHRPIYIVTD 502
           L  V +  + +    D
Sbjct: 81  LLNVFTPQKTLEEFQD 96

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 145

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.7 bits (105), Expect = 3e-06
 Identities = 9/64 (14%), Positives = 19/64 (29%), Gaps = 9/64 (14%)

Query: 128 VVALYPFKAIE-------GGDLSLEKGAEYEVMDDTQEHWW--KVKDKNGSVGYIPSNYV 178
           V     +              +S +      + +     WW  ++  +   +G+IPS   
Sbjct: 26  VKTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPLR 85

Query: 179 KEKE 182
            E  
Sbjct: 86  LENI 89

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.7 bits (110), Expect = 4e-06
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 7/75 (9%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDDFIE----EAKVMTRLQHQNLV 485
            ++ LG+G FG V   K + S    AM  + +  + +   IE    E +++  +    LV
Sbjct: 45  RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104

Query: 486 QLYGVCSKHRPIYIV 500
           +L      +  +Y+V
Sbjct: 105 KLEFSFKDNSNLYMV 119

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 45.8 bits (108), Expect = 5e-06
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 14/84 (16%)

Query: 433 LLEELGSGQFGVVRRGKWRGSIDVAMMK-------------EGTMSEDDFIEEAKVMTRL 479
             E LG G   VVRR   + +     +K             E     +  ++E  ++ ++
Sbjct: 7   PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 66

Query: 480 Q-HQNLVQLYGVCSKHRPIYIVTD 502
             H N++QL      +   ++V D
Sbjct: 67  SGHPNIIQLKDTYETNTFFFLVFD 90

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 37.0 bits (85), Expect = 0.003
 Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
              N+  +  + D+W+ GV+M+ +   G  P+   K   ++  +  G        W
Sbjct: 185 MNDNHPGYGKEVDMWSTGVIMYTLLA-GSPPFWHRKQMLMLRMIMSGNYQFGSPEW 239

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.2 bits (108), Expect = 5e-06
 Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDDFIEEAKVMTRLQHQNLVQLYG 489
           L+ +LG G F  V   K   +   VAM  ++   +  +   +E K++ R+   +  +   
Sbjct: 17  LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDS 76

Query: 490 VCSKH 494
           + + H
Sbjct: 77  MGANH 81

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 2e-05
 Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 12/86 (13%)

Query: 422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRL-Q 480
           D +++        + LG G  G V +   + + +   +K           E ++  R  Q
Sbjct: 11  DDYKV------TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREVELHWRASQ 63

Query: 481 HQNLVQLYGVC----SKHRPIYIVTD 502
             ++V++  V     +  + + IV +
Sbjct: 64  CPHIVRIVDVYENLYAGRKCLLIVME 89

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 2e-05
 Identities = 13/82 (15%), Positives = 33/82 (40%), Gaps = 12/82 (14%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAM--MKEGTMSEDDFIE-------EAKVMTRLQ-- 480
           +   LGSG FG V  G      + VA+  +++  +S+   +        E  ++ ++   
Sbjct: 8   VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67

Query: 481 HQNLVQLYGVCSKHRPIYIVTD 502
              +++L     +     ++ +
Sbjct: 68  FSGVIRLLDWFERPDSFVLILE 89

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 43.3 bits (101), Expect = 3e-05
 Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 3/73 (4%)

Query: 433 LLEELGSGQFGVVRRGKWRGS-IDVAMMKEGTMSEDD-FIEEAKVMTRLQH-QNLVQLYG 489
           +   +G G FGV+  G    +   VA+  E   S+     +E +    L     +  +Y 
Sbjct: 9   VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYY 68

Query: 490 VCSKHRPIYIVTD 502
              +     +V D
Sbjct: 69  FGQEGLHNVLVID 81

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 4e-05
 Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 12/99 (12%)

Query: 416 TAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSID----VAM--MKEGTMSEDD- 468
           TA L+    ++      LL+ LG+G +G V   +     D     AM  +K+ T+ +   
Sbjct: 11  TANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAK 70

Query: 469 ----FIEEAKVMTRLQHQ-NLVQLYGVCSKHRPIYIVTD 502
                  E +V+  ++    LV L+        ++++ D
Sbjct: 71  TTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILD 109

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 7e-05
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)

Query: 433 LLEELGSGQFGVVRRGKWR--GSIDVAM--MKEGTMSED---DFIEEAKVMTRL---QHQ 482
            + E+G G +G V + +    G   VA+  ++  T  E      I E  V+  L   +H 
Sbjct: 11  CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP 70

Query: 483 NLVQLYGVCSKHR 495
           N+V+L+ VC+  R
Sbjct: 71  NVVRLFDVCTVSR 83

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 0.004
 Identities = 11/56 (19%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 202 QVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKPKAW 257
           +VL  + +++  D+W+ G +  E+F   K  +    + + + ++   I L   + W
Sbjct: 185 EVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPGEEDW 239

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 136

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.7 bits (87), Expect = 7e-04
 Identities = 10/64 (15%), Positives = 21/64 (32%), Gaps = 9/64 (14%)

Query: 128 VVALYPFKAIE-------GGDLSLEKGAEYEVMDDTQEHWW--KVKDKNGSVGYIPSNYV 178
           V     +  +        G  ++ E      + +     WW  ++  + G + +IPS   
Sbjct: 26  VRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQR 85

Query: 179 KEKE 182
            E  
Sbjct: 86  LESI 89

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	513
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.93
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.93
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.93
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.93
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.93
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.92
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.92
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.92
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.92
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.92
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.92
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.92
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.92
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.91
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.91
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.91
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.91
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.91
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.91
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.91
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.91
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.91
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.9
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.9
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.9
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.9
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.9
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.9
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.9
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.9
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.9
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.9
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.9
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.89
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.89
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.89
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.89
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.89
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.89
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.88
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.88
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.88
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.87
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.87
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.86
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.86
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.85
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.85
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.85
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.84
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.84
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.83
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.83
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.82
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.82
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.8
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.8
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.78
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.77
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.76
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.67
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.64
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.62
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.6
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.54
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.54
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.53
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.5
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.49
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.49
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.48
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.48
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.48
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.48
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.47
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.47
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.47
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.46
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.45
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.45
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.45
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.45
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.44
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.44
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.44
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.43
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.42
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.41
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.41
d2oq1a1	130	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.4
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.4
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.39
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.38
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.38
d1rjaa_	100	Tyrosine-protein kinase 6 (Breast tumor kinase, Br	99.38
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.38
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.37
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.37
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.36
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.33
d1a81a1	129	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.33
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.32
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.31
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.31
d2oq1a2	124	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.28
d1qcfa2	103	Hemopoetic cell kinase Hck {Human (Homo sapiens) [	99.28
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.27
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.26
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.25
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.25
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.25
d1lkka_	105	p56-lck tyrosine kinase {Human (Homo sapiens) [Tax	99.25
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.25
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.24
d1blja_	114	P55 Blk protein tyrosine kinase {Mouse (Mus muscul	99.24
d1i3za_	103	Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus	99.23
d1a81a2	125	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.23
d1o48a_	106	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.22
d1opka2	101	Abl tyrosine kinase {Mouse (Mus musculus) [TaxId:	99.21
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.2
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.2
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.2
d1jwoa_	97	Csk homologous kinase Chk {Human (Homo sapiens) [T	99.2
d1g83a2	104	Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId:	99.2
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.19
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.19
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.19
d1luia_	108	Itk/tsk protein tyrosine kinase {Mouse (Mus muscul	99.19
d1k9aa2	101	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.18
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.15
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.15
d2fcia1	105	Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId:	99.14
d1jyra_	96	Growth factor receptor-bound protein 2 (GRB2) {Hum	99.13
d1nrva_	105	Growth factor receptor-bound protein 10, GRB10 {Hu	99.11
d1d4ta_	104	The Xlp protein Sap {Human (Homo sapiens) [TaxId:	99.11
d2shpa2	109	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.09
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.07
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.04
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.04
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.03
d1r1qa_	97	GRB2-related adaptor protein 2 (MONA, GRID) {Mouse	99.0
d2qmsa1	113	Growth factor receptor-bound protein 7 {Human (Hom	99.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.98
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	98.98
d2cs0a1	106	Hematopoietic SH2 domain containing protein HSH2D	98.92
d1qada_	107	Phosphatidylinositol 3-kinase, p85-alpha subunit {	98.88
d2shpa3	108	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	98.87
d1rpya_	86	Adaptor protein Aps {Rat (Rattus norvegicus) [TaxI	98.85
d1mila_	104	Shc adaptor protein {Human (Homo sapiens) [TaxId:	98.84
d2izva2	112	Suppressor of cytokine signaling 4, SOCS-4 {Human	98.82
d2eyva1	109	Crk proto-oncogen {Human (Homo sapiens) [TaxId: 96	98.78
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	98.77
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.76
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	98.71
d2c9wa2	103	Suppressor of cytokine signaling 2, SOCS-2 {Human	98.71
d1fu6a_	111	Phosphatidylinositol 3-kinase, p85-alpha subunit {	98.58
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	98.53
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	98.49
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	98.49
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	98.48
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	98.47
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	98.47
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	98.45
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	98.45
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	98.42
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	98.4
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	98.39
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	98.38
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	98.37
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	98.37
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	98.36
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	98.34
d1xa6a2	141	Beta-chimaerin, N-terminal domain {Human (Homo sap	98.33
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.33
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	98.31
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	98.3
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	98.29
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	98.29
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	98.27
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	98.26
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	98.24
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	98.22
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	98.21
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	98.21
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	98.2
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	98.2
d2hspa_	71	Phospholipase C, SH3 domain {Human (Homo sapiens)	98.19
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	98.18
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	98.17
d1wiea_	96	RIM binding protein 2, RIMBP2 {Human (Homo sapiens	98.16
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	98.15
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	98.13
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.03
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	98.01
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	97.99
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	97.97
d1uura3	131	STAT homologue {Dictyostelium discoideum [TaxId: 4	97.92
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	97.9
d1t0ha_	96	SH3-like domain of the L-type calcium channel {Rab	97.78
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	97.78
d1kjwa1	96	Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}	97.77
d1gcqc_	69	Vav N-terminal SH3 domain {Mouse (Mus musculus) [T	97.65
d1i1ja_	106	Melanoma inhibitory activity protein {Human (Homo	97.63
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	97.52
d1phta_	83	Phosphatidylinositol 3-kinase (p85-alpha subunit,	97.52
d1vyva1	145	SH3-like domain of the L-type calcium channel {Rat	97.2
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	97.13
d1xa6a2	141	Beta-chimaerin, N-terminal domain {Human (Homo sap	97.02
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	96.76
d1vyua1	136	SH3-like domain of the L-type calcium channel {Rat	96.74
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	96.7
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	96.63
d1bg1a3	141	STAT3b {Mouse (Mus musculus) [TaxId: 10090]}	96.58
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	96.31
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	96.25
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	96.15
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	96.13
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	95.98
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	95.96
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	95.83
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	95.77
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	95.75
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	95.74
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	95.65
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	95.57
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	95.57
d2hspa_	71	Phospholipase C, SH3 domain {Human (Homo sapiens)	95.54
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	95.53
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	95.48
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	95.38
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	95.22
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	95.13
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	95.09
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	94.85
d1uura3	131	STAT homologue {Dictyostelium discoideum [TaxId: 4	94.8
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	94.76
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	94.71
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	94.66
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	94.53
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	94.37
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	94.31
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	94.04
d1t0ha_	96	SH3-like domain of the L-type calcium channel {Rab	93.54
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	93.42
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	93.15
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	93.03
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	92.93
d2eyva1	109	Crk proto-oncogen {Human (Homo sapiens) [TaxId: 96	92.81
d1ri9a_	77	Fyn-binding protein (T-cell adapter protein adap)	92.78
d1kjwa1	96	Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}	92.72
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	91.78
d1gcqc_	69	Vav N-terminal SH3 domain {Mouse (Mus musculus) [T	90.46
d1vyva1	145	SH3-like domain of the L-type calcium channel {Rat	90.18
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	89.41
d1phta_	83	Phosphatidylinositol 3-kinase (p85-alpha subunit,	89.31
d1i1ja_	106	Melanoma inhibitory activity protein {Human (Homo	89.3
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	89.25
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	89.02
d2shpa3	108	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	88.26
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	88.09
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	87.56
d1wiea_	96	RIM binding protein 2, RIMBP2 {Human (Homo sapiens	86.5
d1mila_	104	Shc adaptor protein {Human (Homo sapiens) [TaxId:	84.84
d1luia_	108	Itk/tsk protein tyrosine kinase {Mouse (Mus muscul	84.5
d1vyua1	136	SH3-like domain of the L-type calcium channel {Rat	83.2

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=9.9e-28  Score=235.80  Aligned_cols=166  Identities=28%  Similarity=0.488  Sum_probs=123.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.+++.++...  +++..+..++.|||.||+|||+++||||||||+|||++.           +..+||      
T Consensus       109 ~~~g~L~~~~~~~~~~--l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~-----------~~~~Kl------  169 (299)
T d1jpaa_         109 MENGSLDSFLRQNDGQ--FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNS-----------NLVCKV------  169 (299)
T ss_dssp             CTTEEHHHHHHTTTTC--SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-----------TCCEEE------
T ss_pred             cCCCcceeeeccccCC--CCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECC-----------CCcEEE------
Confidence            5799999999886543  688999999999999999999999999999999955444           445567      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-.                                                          ..... .
T Consensus       170 ------~DFGla~~~----------------------------------------------------------~~~~~-~  184 (299)
T d1jpaa_         170 ------SDFGLSRFL----------------------------------------------------------EDDTS-D  184 (299)
T ss_dssp             ------CCC-----------------------------------------------------------------------
T ss_pred             ------CCcccceEc----------------------------------------------------------cCCCC-c
Confidence                  899998610                                                          00000 0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                         ....+..+                    ..+++.+||||++....|+.++|||||||++|||+|+|+.||...+..+
T Consensus       185 ---~~~~~~~~--------------------~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~  241 (299)
T d1jpaa_         185 ---PTYTSALG--------------------GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD  241 (299)
T ss_dssp             ----------------------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             ---ceeeeccc--------------------ccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHH
Confidence               00000000                    0134556778888888999999999999999999988999999999989


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++.+++.|            .||..++..||++.+++..
T Consensus       242 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         242 VINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999888877766            5899999999999888754

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.2e-28  Score=235.49  Aligned_cols=163  Identities=27%  Similarity=0.471  Sum_probs=127.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++......  +++..+..++.|||.||+|||+++||||||||+|||++.++           .+|+      
T Consensus        90 ~~~g~L~~~l~~~~~~--l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~-----------~~Kl------  150 (285)
T d1u59a_          90 AGGGPLHKFLVGKREE--IPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH-----------YAKI------  150 (285)
T ss_dssp             CTTEEHHHHHTTCTTT--SCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETT-----------EEEE------
T ss_pred             CCCCcHHHHhhccccC--CCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCC-----------ceee------
Confidence            5789999999776543  68899999999999999999999999999999995554443           4566      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-                                                          +.....  
T Consensus       151 ------~DFGla~~----------------------------------------------------------~~~~~~--  164 (285)
T d1u59a_         151 ------SDFGLSKA----------------------------------------------------------LGADDS--  164 (285)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CTTCSC--
T ss_pred             ------ccchhhhc----------------------------------------------------------cccccc--
Confidence                  89998861                                                          000000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                                 .....             ....+++.|||||++....|+.++|||||||++|||+|.|..||...+..+
T Consensus       165 -----------~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~  220 (285)
T d1u59a_         165 -----------YYTAR-------------SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE  220 (285)
T ss_dssp             -----------EECCC-------------CSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH
T ss_pred             -----------ccccc-------------cccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHH
Confidence                       00000             001244566778888888999999999999999999988999999998889


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+.++.+++.|            .||..++..||++.+++.
T Consensus       221 ~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~  264 (285)
T d1u59a_         221 VMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ  264 (285)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            99999888887766            589999999998888754

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.1e-27  Score=228.98  Aligned_cols=157  Identities=17%  Similarity=0.225  Sum_probs=122.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++|.+..   .+++..++.+++||+.||+|||++|||||||||+|||++.++           ..|+      
T Consensus        88 ~~~g~L~~~l~~~~---~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~-----------~~kl------  147 (263)
T d2j4za1          88 APLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----------ELKI------  147 (263)
T ss_dssp             CTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-----------CEEE------
T ss_pred             cCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCC-----------CEee------
Confidence            57899999999865   468999999999999999999999999999999996555543           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-..                                                            +.  
T Consensus       148 ------~DFG~a~~~~------------------------------------------------------------~~--  159 (263)
T d2j4za1         148 ------ADFGWSVHAP------------------------------------------------------------SS--  159 (263)
T ss_dssp             ------CCCCSCSCCC------------------------------------------------------------CC--
T ss_pred             ------cccceeeecC------------------------------------------------------------CC--
Confidence                  8888876100                                                            00  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ....                          +.|++.+||||++....|+.++||||+||++|||++ |+.||...+..+
T Consensus       160 -~~~~--------------------------~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~-G~~Pf~~~~~~~  211 (263)
T d2j4za1         160 -RRTT--------------------------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV-GKPPFEANTYQE  211 (263)
T ss_dssp             -CCEE--------------------------TTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHH-SSCTTCCSSHHH
T ss_pred             -cccc--------------------------cCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhc-CCCCCCCCCHHH
Confidence             0001                          125566677777888889999999999999999999 999999888888


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++....++           +||..++..|++++++|.+
T Consensus       212 ~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         212 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             HHHHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             HHHHHHcCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcC
Confidence            88777655432222           4788889999999999875

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.6e-27  Score=231.79  Aligned_cols=162  Identities=28%  Similarity=0.475  Sum_probs=126.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++++++.   ++++..+..++.|||.||+|||+++||||||||+|||++.++           ..|+      
T Consensus        89 ~~~g~L~~~l~~~~---~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~-----------~~kl------  148 (277)
T d1xbba_          89 AELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-----------YAKI------  148 (277)
T ss_dssp             CTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT-----------EEEE------
T ss_pred             CCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccC-----------cccc------
Confidence            57999999999865   468999999999999999999999999999999996555543           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-                                                          +.......
T Consensus       149 ------~DFGla~~----------------------------------------------------------~~~~~~~~  164 (277)
T d1xbba_         149 ------SDFGLSKA----------------------------------------------------------LRADENYY  164 (277)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCTTCSEE
T ss_pred             ------cchhhhhh----------------------------------------------------------cccccccc
Confidence                  89998861                                                          00000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ....                          ...|++.|||||++....|+.++|||||||++|||+|.|+.||...+..+
T Consensus       165 ~~~~--------------------------~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~  218 (277)
T d1xbba_         165 KAQT--------------------------HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE  218 (277)
T ss_dssp             EC------------------------------CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             cccc--------------------------ccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH
Confidence            0000                          01245567788888888999999999999999999987999999998888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+.++.+++.|            .||..++..||++.+++.
T Consensus       219 ~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~  262 (277)
T d1xbba_         219 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  262 (277)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHcCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            99999888887776            589999999999888753

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.9e-27  Score=236.61  Aligned_cols=165  Identities=27%  Similarity=0.422  Sum_probs=123.9

Q ss_pred             CCCCcHHHHHHhcCCC--------------------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccc
Q psy17476          1 MRHGSLLNYLRRHENT--------------------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEI   60 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~--------------------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~   60 (513)
                      +++|+|.++|+++...                    ..+++..++.++.||++||+|||+++||||||||+|||++.++ 
T Consensus       123 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~-  201 (325)
T d1rjba_         123 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK-  201 (325)
T ss_dssp             CTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTT-
T ss_pred             CCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCC-
Confidence            5799999999876431                    1478899999999999999999999999999999996555443 


Q ss_pred             cccccCCccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCC
Q psy17476         61 SFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGG  140 (513)
Q Consensus        61 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (513)
                                .+|+            +|||+++-..-                                           
T Consensus       202 ----------~~Kl------------~DFGla~~~~~-------------------------------------------  216 (325)
T d1rjba_         202 ----------VVKI------------CDFGLARDIMS-------------------------------------------  216 (325)
T ss_dssp             ----------EEEE------------CCCGGGSCGGG-------------------------------------------
T ss_pred             ----------eEEE------------eeccccccccC-------------------------------------------
Confidence                      4466            89999871000                                           


Q ss_pred             CCCCCCCCEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCcccccee
Q psy17476        141 DLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGV  220 (513)
Q Consensus       141 ~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~  220 (513)
                                                 ..      ......         ...|++.+||||++....|+.++|||||||
T Consensus       217 ---------------------------~~------~~~~~~---------~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gv  254 (325)
T d1rjba_         217 ---------------------------DS------NYVVRG---------NARLPVKWMAPESLFEGIYTIKSDVWSYGI  254 (325)
T ss_dssp             ---------------------------CT------TSEEET---------TEEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             ---------------------------CC------ceeeec---------cccCCCccCChHHHcCCCCCcceeccchhH
Confidence                                       00      000000         011456678888888889999999999999


Q ss_pred             eeeeeeecCCCCCCCCCccee-ccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        221 LMWEVFTCGKMPYGRLKNTEV-VDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       221 ~l~el~t~g~~pf~~~~~~~~-~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++|||+|+|..||.+.+..+. ...+..+.+++.|            .||..++..||++++++..
T Consensus       255 il~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         255 LLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             HHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            999999889999988766544 4445666666655            5899999999999998864

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.3e-27  Score=232.14  Aligned_cols=162  Identities=25%  Similarity=0.380  Sum_probs=115.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++|++....  +++..+..++.|||+||+|||+++||||||||+|||++.+           ..+|+      
T Consensus        85 ~~~g~L~~~l~~~~~~--~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~-----------~~~Kl------  145 (276)
T d1uwha_          85 CEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-----------LTVKI------  145 (276)
T ss_dssp             CCEEEHHHHHHTSCCC--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT-----------SSEEE------
T ss_pred             CCCCCHHHHHhhccCC--CCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCC-----------CCEEE------
Confidence            5789999999876543  6889999999999999999999999999999999554443           45566      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-...                                                          ... -
T Consensus       146 ------~DFGla~~~~~----------------------------------------------------------~~~-~  160 (276)
T d1uwha_         146 ------GDFGLATVKSR----------------------------------------------------------WSG-S  160 (276)
T ss_dssp             ------CCCCCSCC------------------------------------------------------------------
T ss_pred             ------ccccceeeccc----------------------------------------------------------cCC-c
Confidence                  89998861000                                                          000 0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc---ccccccCccccceeeeeeeeecCCCCCCCCC
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY---TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK  237 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~  237 (513)
                      .......                          |++.|||||++..   ..|+.++|||||||++|||+| |+.||...+
T Consensus       161 ~~~~~~~--------------------------gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~t-g~~Pf~~~~  213 (276)
T d1uwha_         161 HQFEQLS--------------------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNIN  213 (276)
T ss_dssp             -----CC--------------------------CCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHH-SSCTTTTCC
T ss_pred             ccccccc--------------------------cCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHH-CCCCCCCCC
Confidence            0001122                          4445555555542   358999999999999999999 999998876


Q ss_pred             ccee-ccccccccccCC--------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 NTEV-VDRVQRGIILEK--------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ~~~~-~~~i~~~~~~~~--------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.+. ...+.++...+.        |        +||..++..||++.+++..
T Consensus       214 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         214 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             CHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            6443 344444433221        1        5899999999999998764

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.9e-27  Score=227.31  Aligned_cols=162  Identities=38%  Similarity=0.600  Sum_probs=122.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++......  +++..+..++.|||.||+|||+++||||||||+|||++.+           ..+|+      
T Consensus        82 ~~~g~L~~~l~~~~~~--~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~-----------~~~Kl------  142 (263)
T d1sm2a_          82 MEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN-----------QVIKV------  142 (263)
T ss_dssp             CTTCBHHHHHHTTTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGG-----------GCEEE------
T ss_pred             cCCCcHHHHhhccccC--CCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCC-----------CCeEe------
Confidence            5799999999886543  5888999999999999999999999999999999555444           45566      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-..                                                          ....  
T Consensus       143 ------~DFGla~~~~----------------------------------------------------------~~~~--  156 (263)
T d1sm2a_         143 ------SDFGMTRFVL----------------------------------------------------------DDQY--  156 (263)
T ss_dssp             ------CSCC----------------------------------------------------------------------
T ss_pred             ------cccchheecc----------------------------------------------------------CCCc--
Confidence                  8999886100                                                          0000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .....                          ..|++.+||||++....|+.++|||||||++|||+|.|.+||...+..+
T Consensus       157 ~~~~~--------------------------~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~  210 (263)
T d1sm2a_         157 TSSTG--------------------------TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE  210 (263)
T ss_dssp             ----------------------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHH
T ss_pred             eeecc--------------------------eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHH
Confidence            00000                          1134456677777878899999999999999999997788888888888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+++.|            .||..++..||++.+++..
T Consensus       211 ~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         211 VVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhcCCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            88888888777666            5899999999999998864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-26  Score=224.42  Aligned_cols=157  Identities=24%  Similarity=0.398  Sum_probs=115.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcc--eeccccCcccccccCccccccccCCccCCCceEEEe
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHN--YIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVAL   78 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~--iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~   78 (513)
                      +++|+|.+++.++.   .+++..++.+++||++||+|||+++  ||||||||+|||++          +.....|+    
T Consensus        94 ~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~----------~~~~~~Kl----  156 (270)
T d1t4ha_          94 MTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT----------GPTGSVKI----  156 (270)
T ss_dssp             CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES----------STTSCEEE----
T ss_pred             CCCCcHHHHHhccc---cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee----------CCCCCEEE----
Confidence            57999999999875   4689999999999999999999998  99999999995443          33344566    


Q ss_pred             ccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCc
Q psy17476         79 YPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE  158 (513)
Q Consensus        79 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  158 (513)
                              +|||+++-.                                                          ..+  
T Consensus       157 --------~DFGla~~~----------------------------------------------------------~~~--  168 (270)
T d1t4ha_         157 --------GDLGLATLK----------------------------------------------------------RAS--  168 (270)
T ss_dssp             --------CCTTGGGGC----------------------------------------------------------CTT--
T ss_pred             --------eecCcceec----------------------------------------------------------cCC--
Confidence                    899988610                                                          000  


Q ss_pred             cceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc
Q psy17476        159 HWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN  238 (513)
Q Consensus       159 ~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~  238 (513)
                         ......||..|+||                          |++.. +|+.++||||+||++|||++ |+.||....+
T Consensus       169 ---~~~~~~GT~~Y~aP--------------------------E~~~~-~~~~~~DIwSlGvilyel~~-g~~Pf~~~~~  217 (270)
T d1t4ha_         169 ---FAKAVIGTPEFMAP--------------------------EMYEE-KYDESVDVYAFGMCMLEMAT-SEYPYSECQN  217 (270)
T ss_dssp             ---SBEESCSSCCCCCG--------------------------GGGGT-CCCTHHHHHHHHHHHHHHHH-SSCTTTTCSS
T ss_pred             ---ccCCcccCccccCH--------------------------HHhCC-CCCCcCchhhHHHHHHHHHH-CCCCCCCccc
Confidence               00122355555555                          44433 58999999999999999999 9999976544


Q ss_pred             -ceeccccccccccCCC-------------CCcCCCCCCHHHHHHHHcC
Q psy17476        239 -TEVVDRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       239 -~~~~~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~  273 (513)
                       .++...+..+.+++..             +||..++..|++++++|.+
T Consensus       218 ~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         218 AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             HHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence             4555666555433211             5788999999999999876

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.1e-27  Score=228.22  Aligned_cols=162  Identities=30%  Similarity=0.558  Sum_probs=125.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++...... .+++..+..++.|||.||.|||+++||||||||+|||++.           +..+||      
T Consensus        89 ~~~g~L~~~~~~~~~~-~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~-----------~~~~Kl------  150 (272)
T d1qpca_          89 MENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD-----------TLSCKI------  150 (272)
T ss_dssp             CTTCBHHHHTTSHHHH-TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-----------TSCEEE------
T ss_pred             CCCCcHHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeec-----------ccceee------
Confidence            5789999988775432 4789999999999999999999999999999999955444           345566      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-                                                          +...    
T Consensus       151 ------~DFGla~~----------------------------------------------------------~~~~----  162 (272)
T d1qpca_         151 ------ADFGLARL----------------------------------------------------------IEDN----  162 (272)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CSSS----
T ss_pred             ------ccccceEE----------------------------------------------------------ccCC----
Confidence                  89999861                                                          0000    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                                .....              ....|++.+||||++....|+.++|||||||++|||+|.|.+||...+..+
T Consensus       163 ----------~~~~~--------------~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~  218 (272)
T d1qpca_         163 ----------EYTAR--------------EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE  218 (272)
T ss_dssp             ----------CEECC--------------TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             ----------ccccc--------------cccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHH
Confidence                      00000              011244556777777777899999999999999999996777788888888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+.++.+++.|            +||..++..||++.+++.
T Consensus       219 ~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~  262 (272)
T d1qpca_         219 VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (272)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            88888888777766            589999999999988865

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=9.1e-27  Score=227.50  Aligned_cols=162  Identities=31%  Similarity=0.493  Sum_probs=124.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++|.+.... .+++..++.++.|||.||+|||+++||||||||+|||++.+           ..+||      
T Consensus        95 ~~~g~l~~~l~~~~~~-~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~-----------~~~Kl------  156 (287)
T d1opja_          95 MTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN-----------HLVKV------  156 (287)
T ss_dssp             CTTCBHHHHHHHSCTT-TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG-----------GCEEE------
T ss_pred             ccCcchHHHhhhcccc-chHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCC-----------CcEEE------
Confidence            5789999999886543 57999999999999999999999999999999999555444           45566      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-..                                                          .+..  
T Consensus       157 ------~DFG~a~~~~----------------------------------------------------------~~~~--  170 (287)
T d1opja_         157 ------ADFGLSRLMT----------------------------------------------------------GDTY--  170 (287)
T ss_dssp             ------CCCCCTTTCC----------------------------------------------------------SSSS--
T ss_pred             ------ccccceeecC----------------------------------------------------------CCCc--
Confidence                  8999886100                                                          0000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                         ....+                       ..+++.+||||++....|+.++|||||||++|||++.|.+||...+..+
T Consensus       171 ---~~~~~-----------------------~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~  224 (287)
T d1opja_         171 ---TAHAG-----------------------AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ  224 (287)
T ss_dssp             ---EEETT-----------------------EEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred             ---eeecc-----------------------ccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHH
Confidence               00000                       1245567888888888999999999999999999995556666777777


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +.+.+..+.+++.|            .||..++..||++.+++.
T Consensus       225 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         225 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            77778777777666            489999999999998865

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.5e-26  Score=226.40  Aligned_cols=158  Identities=18%  Similarity=0.319  Sum_probs=118.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++    ++++..++.+++||+.||+|||++|||||||||+|||++.++           ..|+      
T Consensus        99 ~~gg~L~~~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~-----------~vkl------  157 (293)
T d1yhwa1          99 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-----------SVKL------  157 (293)
T ss_dssp             CTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-----------CEEE------
T ss_pred             cCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCC-----------cEee------
Confidence            5789999988764    368999999999999999999999999999999996665554           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.                                                          +.....  
T Consensus       158 ------~DFG~a~~----------------------------------------------------------~~~~~~--  171 (293)
T d1yhwa1         158 ------TDFGFCAQ----------------------------------------------------------ITPEQS--  171 (293)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCSTTC--
T ss_pred             ------ccchhhee----------------------------------------------------------eccccc--
Confidence                  88988761                                                          000000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       .....                          .|++.+||||++....|+.++||||+||++|||++ |..||...+..+
T Consensus       172 -~~~~~--------------------------~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemlt-G~~Pf~~~~~~~  223 (293)
T d1yhwa1         172 -KRSTM--------------------------VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLR  223 (293)
T ss_dssp             -CBCCC--------------------------CSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHH
T ss_pred             -ccccc--------------------------ccCCCccChhhhcCCCCCchhceehHhHHHHHHhh-CCCCCCCCCHHH
Confidence             00011                          25556667777777789999999999999999999 999998887766


Q ss_pred             eccccccccccCC--C------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK--P------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~--p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+..+.....+..  |            .||..++..|+++.++|.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         224 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             HHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            6655543332221  1            5788999999999999876

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.4e-27  Score=228.29  Aligned_cols=162  Identities=19%  Similarity=0.317  Sum_probs=117.8

Q ss_pred             CCCCcHHHHHHhcCC-CCCCchhHHHHHHHHHHHHHHHHHhcc-----eeccccCcccccccCccccccccCCccCCCce
Q psy17476          1 MRHGSLLNYLRRHEN-TLGGNVGLLLDMCIQVCKGMAYLERHN-----YIHRETKKSLYPSSLNEISFILWPDQMIRPKV   74 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~gl~ylH~~~-----iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~   74 (513)
                      +++|+|.+++.++.. ...+++..++.++.|++.||+|||+++     ||||||||+|||++.++           ..|+
T Consensus        87 ~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~-----------~vkl  155 (269)
T d2java1          87 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ-----------NVKL  155 (269)
T ss_dssp             CTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTS-----------CEEE
T ss_pred             CCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCC-----------cEEE
Confidence            478999999987421 224799999999999999999999976     99999999996655543           3455


Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEee
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMD  154 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  154 (513)
                                  +|||+++-.                                                          .
T Consensus       156 ------------~DFG~a~~~----------------------------------------------------------~  165 (269)
T d2java1         156 ------------GDFGLARIL----------------------------------------------------------N  165 (269)
T ss_dssp             ------------CCHHHHHHC-----------------------------------------------------------
T ss_pred             ------------eeccceeec----------------------------------------------------------c
Confidence                        889888610                                                          0


Q ss_pred             cCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCC
Q psy17476        155 DTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYG  234 (513)
Q Consensus       155 ~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~  234 (513)
                      ....   .....                          .|++.+||||++....|+.++|||||||++|||+| |+.||.
T Consensus       166 ~~~~---~~~~~--------------------------~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~t-g~~Pf~  215 (269)
T d2java1         166 HDTS---FAKAF--------------------------VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA-LMPPFT  215 (269)
T ss_dssp             ---------------------------------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCSCC
T ss_pred             cCCC---ccccC--------------------------CCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhh-CCCCCC
Confidence            0000   00011                          24455566777777789999999999999999999 999999


Q ss_pred             CCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        235 RLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+..++...+..+...+.|            +||..++..|+++.++|.+
T Consensus       216 ~~~~~~~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h  266 (269)
T d2java1         216 AFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  266 (269)
T ss_dssp             CSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            98888888888766555444            5788999999999999876

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.9e-27  Score=228.83  Aligned_cols=165  Identities=17%  Similarity=0.205  Sum_probs=121.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+...  ++++..++.+++||+.||.|||++|||||||||+|||++.++           ..|+      
T Consensus        91 ~~~g~L~~~~~~~~~--~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~-----------~~Kl------  151 (288)
T d2jfla1          91 CAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG-----------DIKL------  151 (288)
T ss_dssp             CTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----------CEEE------
T ss_pred             CCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCC-----------CEEE------
Confidence            578999999887654  368999999999999999999999999999999996665554           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++..                                                          ...   .
T Consensus       152 ------~DFG~a~~~----------------------------------------------------------~~~---~  164 (288)
T d2jfla1         152 ------ADFGVSAKN----------------------------------------------------------TRT---I  164 (288)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------HHH---H
T ss_pred             ------Eechhhhcc----------------------------------------------------------CCC---c
Confidence                  899887510                                                          000   0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......||..|+|||.+....                     .....|+.++||||+||++|||+| |..||...+..+
T Consensus       165 ~~~~~~~Gt~~y~APE~l~~~~---------------------~~~~~y~~k~DiwSlGvilyemlt-g~~Pf~~~~~~~  222 (288)
T d2jfla1         165 QRRDSFIGTPYWMAPEVVMCET---------------------SKDRPYDYKADVWSLGITLIEMAE-IEPPHHELNPMR  222 (288)
T ss_dssp             HHHTCCCSCCTTCCHHHHTTCS---------------------TTTSSTTTHHHHHHHHHHHHHHHH-SSCTTTTSCGGG
T ss_pred             ccccccccccccCCHHHHhhcc---------------------cCCCCCChhhhHHHHHHHHHHHhh-CCCCCCCCCHHH
Confidence            0001123555555555432110                     024568999999999999999999 999999888888


Q ss_pred             eccccccccccCCC--------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP--------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p--------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++..+.++..+..+              +||..++..|+++.++|.+
T Consensus       223 ~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         223 VLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             HHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            87777655433221              4799999999999999976

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8.2e-27  Score=231.19  Aligned_cols=163  Identities=27%  Similarity=0.525  Sum_probs=127.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.++...  +++..++.++.|||.||+|||+++||||||||+|||++.++           .+|+      
T Consensus        92 ~~~~~l~~~~~~~~~~--~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~-----------~~kl------  152 (317)
T d1xkka_          92 MPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----------HVKI------  152 (317)
T ss_dssp             CTTCBHHHHHHHTSSS--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT-----------EEEE------
T ss_pred             ccCCcccccccccccC--CCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCC-----------CeEe------
Confidence            5789999999987654  58889999999999999999999999999999996555443           4466      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-.                                                 ..++         .. 
T Consensus       153 ------~DFGla~~~-------------------------------------------------~~~~---------~~-  167 (317)
T d1xkka_         153 ------TDFGLAKLL-------------------------------------------------GAEE---------KE-  167 (317)
T ss_dssp             ------CCCSHHHHT-------------------------------------------------TTTC---------C--
T ss_pred             ------eccccceec-------------------------------------------------cccc---------cc-
Confidence                  899988610                                                 0000         00 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .....                          ..|++.+||||++....|+.++|||||||++|||+|.|.+||...+..+
T Consensus       168 ~~~~~--------------------------~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~  221 (317)
T d1xkka_         168 YHAEG--------------------------GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE  221 (317)
T ss_dssp             ---------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG
T ss_pred             ccccc--------------------------cccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH
Confidence            00000                          1244556777777788899999999999999999998999999999999


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++.+++.|            .||..++..||++.+++.+
T Consensus       222 ~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         222 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             HHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence            99999888887766            5899999999999998865

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1e-26  Score=225.06  Aligned_cols=161  Identities=17%  Similarity=0.238  Sum_probs=112.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++|.++.   ++++..++.+++|++.||+|||++|||||||||+|||++.++           ..|+      
T Consensus        85 ~~gg~L~~~l~~~~---~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~-----------~~KL------  144 (271)
T d1nvra_          85 CSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----------NLKI------  144 (271)
T ss_dssp             CTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC-----------CEEE------
T ss_pred             cCCCcHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCC-----------CEEE------
Confidence            46899999997654   478999999999999999999999999999999996555443           3456      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                          ...+.. 
T Consensus       145 ------~DFG~a~~~----------------------------------------------------------~~~~~~-  159 (271)
T d1nvra_         145 ------SDFGLATVF----------------------------------------------------------RYNNRE-  159 (271)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------EETTEE-
T ss_pred             ------ccchhheee----------------------------------------------------------ccCCcc-
Confidence                  899988610                                                          000000 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccc-cccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRF-SSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                      -....                          +-|++.+||||++....| +.++||||+||++|||+| |+.||......
T Consensus       160 ~~~~~--------------------------~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~-G~~pf~~~~~~  212 (271)
T d1nvra_         160 RLLNK--------------------------MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPWDQPSDS  212 (271)
T ss_dssp             CCBCC--------------------------CCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHH-SSCSCSSSSTT
T ss_pred             ccccc--------------------------eeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHh-CCCCCCCCChH
Confidence            00011                          124555566666666665 678999999999999999 99999766543


Q ss_pred             eec-cccccccccCCC-------------CCcCCCCCCHHHHHHHHcC
Q psy17476        240 EVV-DRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       240 ~~~-~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ... ..+........+             +||..++..|++++++|++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  260 (271)
T d1nvra_         213 CQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  260 (271)
T ss_dssp             SHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            322 222211111111             4788999999999999876

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.5e-26  Score=227.38  Aligned_cols=165  Identities=25%  Similarity=0.415  Sum_probs=117.9

Q ss_pred             CCCCcHHHHHHhcCC-------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHEN-------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.++|+....             ...+++..+..++.|||.||+|||+++||||||||+|||++.+         
T Consensus       100 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~---------  170 (299)
T d1ywna1         100 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---------  170 (299)
T ss_dssp             CTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGG---------
T ss_pred             cCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCC---------
Confidence            578999999987532             1137889999999999999999999999999999999655544         


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                        ...||            +|||+++-.                                                    
T Consensus       171 --~~~Kl------------~DFGla~~~----------------------------------------------------  184 (299)
T d1ywna1         171 --NVVKI------------CDFGLARDI----------------------------------------------------  184 (299)
T ss_dssp             --GCEEE------------CC------C----------------------------------------------------
T ss_pred             --CcEEE------------ccCcchhhc----------------------------------------------------
Confidence              34566            899998610                                                    


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                            ..... .....                          .+.|++.+||||++....|+.++|||||||++|||+|
T Consensus       185 ------~~~~~-~~~~~--------------------------~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt  231 (299)
T d1ywna1         185 ------YKDPD-YVRKG--------------------------DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS  231 (299)
T ss_dssp             ------CSCTT-SCCTT--------------------------SCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             ------ccccc-ccccC--------------------------ceeeCccccchhHhhcCCCCcccceeehHHHHHHHHh
Confidence                  00000 00000                          1225566677777888889999999999999999999


Q ss_pred             cCCCCCCCCCc-ceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKN-TEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~-~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+..||...+. ..+...+.++.+++.|            .||..++..||++.+++.+
T Consensus       232 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         232 LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             TSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            56788987654 3445556677766655            4899999999999998864

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.5e-26  Score=225.57  Aligned_cols=163  Identities=30%  Similarity=0.523  Sum_probs=122.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.+++.+....  +++..+..++.|||.||+|||+++||||||||+|||++.+           ..+||      
T Consensus        91 ~~~~~l~~~~~~~~~~--~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~-----------~~~Kl------  151 (283)
T d1mqba_          91 MENGALDKFLREKDGE--FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSN-----------LVCKV------  151 (283)
T ss_dssp             CTTEEHHHHHHHTTTC--SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT-----------CCEEE------
T ss_pred             cccCcchhhhhccccc--ccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCC-----------CeEEE------
Confidence            5688999988876554  5888999999999999999999999999999999555444           45677      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-.                                                          .......
T Consensus       152 ------~DFGla~~~----------------------------------------------------------~~~~~~~  167 (283)
T d1mqba_         152 ------SDFGLSRVL----------------------------------------------------------EDDPEAT  167 (283)
T ss_dssp             ------CCCCC---------------------------------------------------------------------
T ss_pred             ------cccchhhcc----------------------------------------------------------cCCCccc
Confidence                  999998710                                                          0000000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .....                          ..|++.|||||++....|+.++|||||||++|||++.|.+|+...+..+
T Consensus       168 ~~~~~--------------------------~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~  221 (283)
T d1mqba_         168 YTTSG--------------------------GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE  221 (283)
T ss_dssp             --------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             eEecc--------------------------CCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHH
Confidence            00000                          1244556677777778899999999999999999996677777778888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+..+.+++.|            .||..++..||++.+++.
T Consensus       222 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         222 VMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            88888888887776            589999999999999875

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.3e-26  Score=224.49  Aligned_cols=159  Identities=16%  Similarity=0.239  Sum_probs=117.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++...+   .+++..++.++.|++.||+|||+++||||||||+|||++.++           ..|+      
T Consensus        90 ~~gg~L~~~~~~~~---~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~-----------~vkl------  149 (288)
T d1uu3a_          90 AKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM-----------HIQI------  149 (288)
T ss_dssp             CTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS-----------CEEE------
T ss_pred             cCCCCHHHhhhccC---CCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCc-----------eEEe------
Confidence            57899999999876   468999999999999999999999999999999996555543           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-                                                          +...... 
T Consensus       150 ------~DFG~a~~----------------------------------------------------------~~~~~~~-  164 (288)
T d1uu3a_         150 ------TDFGTAKV----------------------------------------------------------LSPESKQ-  164 (288)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CC------
T ss_pred             ------ccccccee----------------------------------------------------------cccCCcc-
Confidence                  89998861                                                          0000000 


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .....                          ..|++.+||||++....|+.++||||+||++|||++ |..||...+..+
T Consensus       165 ~~~~~--------------------------~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~-g~~Pf~~~~~~~  217 (288)
T d1uu3a_         165 ARANS--------------------------FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPFRAGNEYL  217 (288)
T ss_dssp             -------------------------------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             ccccc--------------------------ccCCccccCceeeccCCCCcccceehhhHHHHHHhh-CCCCCCCcCHHH
Confidence            00001                          125566677777777889999999999999999999 999999888888


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHHHHHHHH
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQRAESIL  271 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~~aeeLL  271 (513)
                      +...+.++....+.           +||..++..|+++++++
T Consensus       218 ~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         218 IFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             HHHHHHTTCCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred             HHHHHHcCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHc
Confidence            87777655332211           46777777777776653

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2e-26  Score=221.43  Aligned_cols=162  Identities=35%  Similarity=0.601  Sum_probs=127.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++......  +++..+..++.|+|+||+|||++||+||||||+||+++.+           ...|+      
T Consensus        81 ~~~g~l~~~~~~~~~~--~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~-----------~~~kl------  141 (258)
T d1k2pa_          81 MANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ-----------GVVKV------  141 (258)
T ss_dssp             CTTEEHHHHHHSGGGC--CCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTT-----------CCEEE------
T ss_pred             cCCCcHHHhhhccccC--CcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCC-----------CcEEE------
Confidence            4789999998886654  5888999999999999999999999999999999555444           34466      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-.                                                          ....  .
T Consensus       142 ------~DfG~a~~~----------------------------------------------------------~~~~--~  155 (258)
T d1k2pa_         142 ------SDFGLSRYV----------------------------------------------------------LDDE--Y  155 (258)
T ss_dssp             ------CCCSSCCBC----------------------------------------------------------SSSS--C
T ss_pred             ------Ccchhheec----------------------------------------------------------cCCC--c
Confidence                  899987610                                                          0000  0


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .......                          +++.|||||.+....|+.++|||||||++|||+|.|+.||...+..+
T Consensus       156 ~~~~~~~--------------------------~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~  209 (258)
T d1k2pa_         156 TSSVGSK--------------------------FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE  209 (258)
T ss_dssp             CCCCCSC--------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH
T ss_pred             eeecccC--------------------------CCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH
Confidence            0000011                          33445667777777899999999999999999987899999999999


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +..++.++.+++.|            +||..++..||+++++|++
T Consensus       210 ~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         210 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            99999888888777            5999999999999999864

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.2e-25  Score=224.03  Aligned_cols=159  Identities=18%  Similarity=0.220  Sum_probs=117.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.+++.++.   .+++..++.+++||+.||+|||++|||||||||+|||++.++           ..|+      
T Consensus        87 ~~gg~L~~~~~~~~---~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g-----------~vkl------  146 (337)
T d1o6la_          87 ANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG-----------HIKI------  146 (337)
T ss_dssp             CTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-----------CEEE------
T ss_pred             cCCCchhhhhhccc---CCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCC-----------CEEE------
Confidence            67999999999876   468999999999999999999999999999999996555544           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-..                                                          ....  
T Consensus       147 ------~DFG~a~~~~----------------------------------------------------------~~~~--  160 (337)
T d1o6la_         147 ------TDFGLCKEGI----------------------------------------------------------SDGA--  160 (337)
T ss_dssp             ------CCCTTCBCSC----------------------------------------------------------CTTC--
T ss_pred             ------eecccccccc----------------------------------------------------------cCCc--
Confidence                  8999886100                                                          0000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       .....                          .|+|.+||||++....|+.++|+||+||++|||++ |..||...+..+
T Consensus       161 -~~~~~--------------------------~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~-G~~pf~~~~~~~  212 (337)
T d1o6la_         161 -TMKTF--------------------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHER  212 (337)
T ss_dssp             -CBCCC--------------------------EECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -ccccc--------------------------eeCHHHhhhhhccCCCCChhhcccchhhHHHHHHH-CCCCCCCcCHHH
Confidence             00011                          24555566666777789999999999999999999 999999988888


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHHH-----HHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQR-----AESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~~-----aeeLL~~  273 (513)
                      +...+..+....+.           .|+..++..|+.     +++++.+
T Consensus       213 ~~~~i~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         213 LFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             HHHHHhcCCCCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence            88777655432222           345666666663     6666654

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=4.1e-26  Score=224.97  Aligned_cols=155  Identities=18%  Similarity=0.172  Sum_probs=115.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|..++..+.   ++++..++.+++||+.||.|||++|||||||||+|||++.++           ..|+      
T Consensus        97 ~~~g~l~~~~~~~~---~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~-----------~~Kl------  156 (309)
T d1u5ra_          97 CLGSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG-----------LVKL------  156 (309)
T ss_dssp             CSEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT-----------EEEE------
T ss_pred             cCCCchHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCC-----------CEEE------
Confidence            46788877666554   469999999999999999999999999999999996665554           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-..                                                                
T Consensus       157 ------~DFG~a~~~~----------------------------------------------------------------  166 (309)
T d1u5ra_         157 ------GDFGSASIMA----------------------------------------------------------------  166 (309)
T ss_dssp             ------CCCTTCBSSS----------------------------------------------------------------
T ss_pred             ------eecccccccC----------------------------------------------------------------
Confidence                  8898876100                                                                


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcc---cccccccCccccceeeeeeeeecCCCCCCCCC
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLN---YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLK  237 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~  237 (513)
                       ......||..|                          ||||++.   ...|+.++|||||||++|||++ |..||...+
T Consensus       167 -~~~~~~GT~~Y--------------------------~APE~~~~~~~~~y~~~~DiwSlGvilyel~~-g~~Pf~~~~  218 (309)
T d1u5ra_         167 -PANSFVGTPYW--------------------------MAPEVILAMDEGQYDGKVDVWSLGITCIELAE-RKPPLFNMN  218 (309)
T ss_dssp             -SBCCCCSCGGG--------------------------CCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSC
T ss_pred             -CCCccccCccc--------------------------cCHHHHhccCCCCcCchhhhhhHHHHHHHHHH-CCCCCCCCC
Confidence             00111244444                          5555553   2468999999999999999999 999998887


Q ss_pred             cceeccccccccccCCC-------------CCcCCCCCCHHHHHHHHcC
Q psy17476        238 NTEVVDRVQRGIILEKP-------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       238 ~~~~~~~i~~~~~~~~p-------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..+.+..+.++..++.+             .||..++..|+++.++|.+
T Consensus       219 ~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         219 AMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             HHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence            77776666554433222             4789999999999999875

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=4.9e-26  Score=224.33  Aligned_cols=161  Identities=17%  Similarity=0.221  Sum_probs=116.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ++||||.++|.++.   .+++..++.++.||+.||+|||+++||||||||+|||+...        +.....|+      
T Consensus        89 ~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~--------~~~~~vkl------  151 (307)
T d1a06a_          89 VSGGELFDRIVEKG---FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL--------DEDSKIMI------  151 (307)
T ss_dssp             CCSCBHHHHHHTCS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS--------STTCCEEE------
T ss_pred             cCCCcHHHhhhccc---CCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeeccc--------CCCceEEE------
Confidence            57899999998764   47999999999999999999999999999999999654331        22334455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-.                                                          +...   
T Consensus       152 ------~DFG~a~~~----------------------------------------------------------~~~~---  164 (307)
T d1a06a_         152 ------SDFGLSKME----------------------------------------------------------DPGS---  164 (307)
T ss_dssp             ------CCC-----------------------------------------------------------------------
T ss_pred             ------eccceeEEc----------------------------------------------------------cCCC---
Confidence                  888887610                                                          0000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ....                          ..|++.+||||++....|+.++||||+||++|||++ |..||...+..+
T Consensus       165 -~~~~--------------------------~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~-g~~Pf~~~~~~~  216 (307)
T d1a06a_         165 -VLST--------------------------ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC-GYPPFYDENDAK  216 (307)
T ss_dssp             -----------------------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHH
T ss_pred             -eeee--------------------------eeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHh-CCCCCCCCCHHH
Confidence             0000                          114556667777778889999999999999999999 999999888877


Q ss_pred             eccccccccccCC-C--------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK-P--------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~-p--------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++..... +              .||..++..|+++.++|.+
T Consensus       217 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         217 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             HHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            7777765433221 1              4688899999999999986

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.91  E-value=8.2e-26  Score=226.81  Aligned_cols=161  Identities=16%  Similarity=0.232  Sum_probs=121.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.+...  ++++..++.+++||+.||+|||++|||||||||+|||++..+         ....|+      
T Consensus       108 ~~gg~L~~~~~~~~~--~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~---------~~~vkL------  170 (352)
T d1koba_         108 LSGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKK---------ASSVKI------  170 (352)
T ss_dssp             CCCCBHHHHTTCTTC--CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTT---------CCCEEE------
T ss_pred             CCCChHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccC---------CCeEEE------
Confidence            578999998877654  369999999999999999999999999999999996654321         223355      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                 ..+..           
T Consensus       171 ------~DFGla~~~-------------------------------------------------~~~~~-----------  184 (352)
T d1koba_         171 ------IDFGLATKL-------------------------------------------------NPDEI-----------  184 (352)
T ss_dssp             ------CCCTTCEEC-------------------------------------------------CTTSC-----------
T ss_pred             ------eecccceec-------------------------------------------------CCCCc-----------
Confidence                  888887610                                                 00000           


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        ...                          ..|++.+||||++....|+.++||||+||++|||+| |..||.+.+..+
T Consensus       185 --~~~--------------------------~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyellt-G~~Pf~~~~~~~  235 (352)
T d1koba_         185 --VKV--------------------------TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS-GLSPFAGEDDLE  235 (352)
T ss_dssp             --EEE--------------------------ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH-SCCSSCCSSHHH
T ss_pred             --eee--------------------------ccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence              000                          124556677777778889999999999999999999 999999888888


Q ss_pred             eccccccccccCCC---------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP---------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p---------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++..+.++.....+               .|+..++..|++++++|.+
T Consensus       236 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         236 TLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             HHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            87777654332211               5788899999999999876

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=6.7e-26  Score=219.78  Aligned_cols=162  Identities=28%  Similarity=0.489  Sum_probs=121.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++.....  ++++..++.++.||+.||+|||+++||||||||+||+++.++           ..|+      
T Consensus        89 ~~~g~l~~~~~~~~~--~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~-----------~~Kl------  149 (273)
T d1mp8a_          89 CTLGELRSFLQVRKY--SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND-----------CVKL------  149 (273)
T ss_dssp             CTTEEHHHHHHHTTT--TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-----------EEEE------
T ss_pred             ccCCcHHhhhhccCC--CCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCC-----------cEEE------
Confidence            578999999887654  368999999999999999999999999999999995554443           3456      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++...-                                                          ...  
T Consensus       150 ------~DfG~a~~~~~----------------------------------------------------------~~~--  163 (273)
T d1mp8a_         150 ------GDFGLSRYMED----------------------------------------------------------STY--  163 (273)
T ss_dssp             ------CC------------------------------------------------------------------------
T ss_pred             ------ccchhheeccC----------------------------------------------------------Ccc--
Confidence                  88988761000                                                          000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      .....                          ..+++.+||||++....|+.++|||||||++|||+|.|.+||...+..+
T Consensus       164 ~~~~~--------------------------~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~  217 (273)
T d1mp8a_         164 YKASK--------------------------GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND  217 (273)
T ss_dssp             ---------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             eeccc--------------------------eecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH
Confidence            00000                          1133455677778888999999999999999999987999999999999


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+..+.+++.|            +||..++..||++.+++..
T Consensus       218 ~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         218 VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999888777666            5899999999999998764

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.6e-26  Score=219.36  Aligned_cols=159  Identities=32%  Similarity=0.587  Sum_probs=123.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++|.++... ++++..++.++.|||.||+|||+++||||||||+|||++.++           ..++      
T Consensus        83 ~~~g~L~~~l~~~~~~-~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~-----------~~kl------  144 (262)
T d1byga_          83 MAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN-----------VAKV------  144 (262)
T ss_dssp             CTTEEHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS-----------CEEE------
T ss_pred             cCCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCC-----------CEee------
Confidence            5799999999876433 468999999999999999999999999999999996655544           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-..                                                          ..    
T Consensus       145 ------~dfg~s~~~~----------------------------------------------------------~~----  156 (262)
T d1byga_         145 ------SDFGLTKEAS----------------------------------------------------------ST----  156 (262)
T ss_dssp             ------CCCCC---------------------------------------------------------------------
T ss_pred             ------cccccceecC----------------------------------------------------------CC----
Confidence                  8888876100                                                          00    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                        .....                          +++.+||||++....|+.++|||||||++|||+|.|++||...+..+
T Consensus       157 --~~~~~--------------------------~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~  208 (262)
T d1byga_         157 --QDTGK--------------------------LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD  208 (262)
T ss_dssp             ---------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG
T ss_pred             --Ccccc--------------------------ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH
Confidence              00001                          22345667777777899999999999999999987899999999999


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...|.++.+++.|            +||..++..||++.+++..
T Consensus       209 ~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         209 VVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             HHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            99999888887777            5899999999999998764

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.1e-25  Score=218.43  Aligned_cols=162  Identities=18%  Similarity=0.269  Sum_probs=123.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++|.++.   ++++..++.+++|++.||+|||+++||||||||+|||++.++..       ....|+      
T Consensus        95 ~~gg~L~~~i~~~~---~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~-------~~~vkl------  158 (293)
T d1jksa_          95 VAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVP-------KPRIKI------  158 (293)
T ss_dssp             CCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSS-------SCCEEE------
T ss_pred             CCCccccchhcccc---ccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCc-------ccceEe------
Confidence            57899999998875   47999999999999999999999999999999999766555421       112344      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.                                                          .+.     
T Consensus       159 ------~DfG~a~~----------------------------------------------------------~~~-----  169 (293)
T d1jksa_         159 ------IDFGLAHK----------------------------------------------------------IDF-----  169 (293)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CTT-----
T ss_pred             ------cchhhhhh----------------------------------------------------------cCC-----
Confidence                  78887650                                                          000     


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                             +.   .               .....+++.+||||++....|+.++||||+||++|||++ |+.||.+.+..+
T Consensus       170 -------~~---~---------------~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~-g~~Pf~~~~~~~  223 (293)
T d1jksa_         170 -------GN---E---------------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTKQE  223 (293)
T ss_dssp             -------SC---B---------------CSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -------Cc---c---------------ccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHc-CCCCCCCCCHHH
Confidence                   00   0               001124556677888888889999999999999999999 999999888888


Q ss_pred             eccccccccccCC-------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK-------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~-------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++..+.++.....       +        +||..++..|++++++|.+
T Consensus       224 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         224 TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             HHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            7777755432211       1        5899999999999999986

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=8.8e-26  Score=222.07  Aligned_cols=164  Identities=27%  Similarity=0.433  Sum_probs=124.8

Q ss_pred             CCCCcHHHHHHhcCC---------------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHEN---------------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|+|.++|+....                     ...+++..+..+++|+|.||+|||+++||||||||+|||++   
T Consensus        98 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld---  174 (301)
T d1lufa_          98 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG---  174 (301)
T ss_dssp             CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---
T ss_pred             cCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEEC---
Confidence            578999999986432                     11368889999999999999999999999999999995444   


Q ss_pred             ccccccCCccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCC
Q psy17476         60 ISFILWPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEG  139 (513)
Q Consensus        60 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (513)
                              .+..+||            +|||+++-     .                                       
T Consensus       175 --------~~~~~Kl------------~DFGls~~-----~---------------------------------------  190 (301)
T d1lufa_         175 --------ENMVVKI------------ADFGLSRN-----I---------------------------------------  190 (301)
T ss_dssp             --------GGGCEEE------------CCCSCHHH-----H---------------------------------------
T ss_pred             --------CCCcEEE------------ccchhhee-----c---------------------------------------
Confidence                    4445677            99998860     0                                       


Q ss_pred             CCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccce
Q psy17476        140 GDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYG  219 (513)
Q Consensus       140 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G  219 (513)
                                    ..... --....                          ..+++.+||||++....|+.++||||||
T Consensus       191 --------------~~~~~-~~~~~~--------------------------~~~~~~y~aPE~~~~~~~t~ksDVwS~G  229 (301)
T d1lufa_         191 --------------YSADY-YKADGN--------------------------DAIPIRWMPPESIFYNRYTTESDVWAYG  229 (301)
T ss_dssp             --------------TGGGC-BC------------------------------CCBCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             --------------cCCcc-ccccCC--------------------------CCcCcCcCCHHHHccCCCChhhhhccch
Confidence                          00000 000000                          1244556777777788899999999999


Q ss_pred             eeeeeeeecCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        220 VLMWEVFTCGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       220 ~~l~el~t~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      |++|||++.+.+||...+..++...+.++.+++.|            .||..++..||++.+++.
T Consensus       230 vvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         230 VVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             HHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999456889999999999999888877666            589999999999999864

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.90  E-value=1.3e-25  Score=225.15  Aligned_cols=161  Identities=22%  Similarity=0.292  Sum_probs=120.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.++|.+...  .+++..++.+++||+.||+|||++|||||||||+|||++.+         .+...|+      
T Consensus       105 ~~gg~L~~~l~~~~~--~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~---------~~~~vkL------  167 (350)
T d1koaa2         105 MSGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK---------RSNELKL------  167 (350)
T ss_dssp             CCSCBHHHHHTCTTS--CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST---------TSCCEEE------
T ss_pred             CCCCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccC---------CCCeEEE------
Confidence            579999999976543  36999999999999999999999999999999999655432         1233455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-                                                          ++...   
T Consensus       168 ------~DFG~a~~----------------------------------------------------------~~~~~---  180 (350)
T d1koaa2         168 ------IDFGLTAH----------------------------------------------------------LDPKQ---  180 (350)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCTTS---
T ss_pred             ------eecchhee----------------------------------------------------------ccccc---
Confidence                  88888750                                                          00000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       .....                          .|++.+||||++....|+.++||||+||++|||++ |+.||.+.+..+
T Consensus       181 -~~~~~--------------------------~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~-G~~Pf~~~~~~~  232 (350)
T d1koaa2         181 -SVKVT--------------------------TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS-GLSPFGGENDDE  232 (350)
T ss_dssp             -CEEEE--------------------------CSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -cccee--------------------------cCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHh-CCCCCCCCCHHH
Confidence             00011                          24556667777777889999999999999999999 999999888888


Q ss_pred             eccccccccccCCC---------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP---------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p---------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++..+..+.....+               +|+..++..|+++.++|.+
T Consensus       233 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         233 TLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             HHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            87777544322111               4688889999999999986

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2e-25  Score=219.34  Aligned_cols=165  Identities=23%  Similarity=0.385  Sum_probs=127.5

Q ss_pred             CCCCcHHHHHHhcCCC-------------CCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHENT-------------LGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~-------------~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.++|......             -.+++..++.+++|||.||+|||+++||||||||+|||++.++        
T Consensus       101 ~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~--------  172 (299)
T d1fgka_         101 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN--------  172 (299)
T ss_dssp             CTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC--------
T ss_pred             cCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCC--------
Confidence            5789999999875421             1368999999999999999999999999999999996555543        


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                         ..|+            +|||+++...-                                                  
T Consensus       173 ---~~kl------------~dfg~~~~~~~--------------------------------------------------  187 (299)
T d1fgka_         173 ---VMKI------------ADFGLARDIHH--------------------------------------------------  187 (299)
T ss_dssp             ---CEEE------------CSTTCCCCGGG--------------------------------------------------
T ss_pred             ---CeEe------------ccchhhccccc--------------------------------------------------
Confidence               4455            78887761000                                                  


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                              .           .....                .....+++.+||||++....|+.++|||||||++|||++
T Consensus       188 --------~-----------~~~~~----------------~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~  232 (299)
T d1fgka_         188 --------I-----------DYYKK----------------TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT  232 (299)
T ss_dssp             --------C-----------CTTCC----------------CTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             --------c-----------ccccc----------------cccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhcc
Confidence                    0           00000                001124456677788888899999999999999999998


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .|.+||...+..++...+..+.+++.|            +||..++..||++.+++..
T Consensus       233 ~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~  290 (299)
T d1fgka_         233 LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  290 (299)
T ss_dssp             TSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            789999988888888888888887776            5899999999999998864

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=3.7e-25  Score=218.82  Aligned_cols=156  Identities=18%  Similarity=0.300  Sum_probs=117.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ++||+|..++....   .+++..++.+++||+.||+|||++|||||||||+|||++.++           ..|+      
T Consensus        86 ~~gg~l~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g-----------~vkL------  145 (316)
T d1fota_          86 IEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG-----------HIKI------  145 (316)
T ss_dssp             CCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS-----------CEEE------
T ss_pred             cCCccccccccccc---cccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCC-----------CEEE------
Confidence            57899999988876   357889999999999999999999999999999996655544           4455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-                                                          ...     
T Consensus       146 ------~DFG~a~~----------------------------------------------------------~~~-----  156 (316)
T d1fota_         146 ------TDFGFAKY----------------------------------------------------------VPD-----  156 (316)
T ss_dssp             ------CCCSSCEE----------------------------------------------------------CSS-----
T ss_pred             ------ecCccceE----------------------------------------------------------ecc-----
Confidence                  89998760                                                          000     


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ....                          +.|++.+||||++....|+.++||||+||++|||+| |+.||...+..+
T Consensus       157 -~~~~--------------------------~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemlt-G~~Pf~~~~~~~  208 (316)
T d1fota_         157 -VTYT--------------------------LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA-GYTPFYDSNTMK  208 (316)
T ss_dssp             -CBCC--------------------------CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHH-SSCTTCCSSHHH
T ss_pred             -cccc--------------------------ccCcccccCHHHHcCCCCCchhhccccchhHHHHHh-CCCCCCCcCHHH
Confidence             0001                          125556667777777889999999999999999999 999999988888


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHH-----HHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQ-----RAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~-----~aeeLL~~  273 (513)
                      +...+.++....++           +++..++..|+     +++++|.+
T Consensus       209 ~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         209 TYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence            88887655433222           34555555553     67777665

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=9.9e-26  Score=218.45  Aligned_cols=163  Identities=26%  Similarity=0.457  Sum_probs=122.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.+++..+...  +++..++.++.|||.||.|||+++|+||||||+||+++.+           ..+|+      
T Consensus        92 ~~~~~l~~~~~~~~~~--l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~-----------~~vkl------  152 (273)
T d1u46a_          92 APLGSLLDRLRKHQGH--FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR-----------DLVKI------  152 (273)
T ss_dssp             CTTCBHHHHHHHHGGG--SCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET-----------TEEEE------
T ss_pred             ecCcchhhhhhcccCC--CCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccc-----------cceee------
Confidence            5789999998886544  6889999999999999999999999999999999555444           34456      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-                                                          +....   
T Consensus       153 ------~DfGl~~~----------------------------------------------------------~~~~~---  165 (273)
T d1u46a_         153 ------GDFGLMRA----------------------------------------------------------LPQND---  165 (273)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCC-C---
T ss_pred             ------ccchhhhh----------------------------------------------------------cccCC---
Confidence                  88988761                                                          00000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                              ... ....              .+.+++.+||||++....++.++|||||||++|||+|.|..||...+..+
T Consensus       166 --------~~~-~~~~--------------~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~  222 (273)
T d1u46a_         166 --------DHY-VMQE--------------HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ  222 (273)
T ss_dssp             --------CEE-EC-------------------CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             --------Ccc-eecC--------------ccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH
Confidence                    000 0000              01123345677778888899999999999999999987899999988888


Q ss_pred             ecccc-ccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRV-QRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i-~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +...+ ..+.+++.+            .||..++..||++.+++.
T Consensus       223 ~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         223 ILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             HHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            87777 445555544            589999999999988764

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.9e-25  Score=221.72  Aligned_cols=122  Identities=25%  Similarity=0.343  Sum_probs=93.2

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh-cceeccccCcccccccCccccccccCCccCCCceEEEec
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER-HNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALY   79 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~-~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~   79 (513)
                      |++|+|.+++.++.   .+++..++.++.|++.||+|||+ ++||||||||+|||++.++           ..|+     
T Consensus        86 ~~gg~L~~~l~~~~---~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~-----------~vkl-----  146 (322)
T d1s9ja_          86 MDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-----------EIKL-----  146 (322)
T ss_dssp             CTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTC-----------CEEE-----
T ss_pred             CCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCC-----------CEEE-----
Confidence            57899999999875   36899999999999999999997 5899999999996655544           3456     


Q ss_pred             cccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcc
Q psy17476         80 PFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH  159 (513)
Q Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (513)
                             +|||+++-.                                                          ...   
T Consensus       147 -------~DFGla~~~----------------------------------------------------------~~~---  158 (322)
T d1s9ja_         147 -------CDFGVSGQL----------------------------------------------------------IDS---  158 (322)
T ss_dssp             -------CCCCCCHHH----------------------------------------------------------HHH---
T ss_pred             -------eeCCCcccc----------------------------------------------------------CCC---
Confidence                   899988610                                                          000   


Q ss_pred             ceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCc
Q psy17476        160 WWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN  238 (513)
Q Consensus       160 ~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~  238 (513)
                        ......                          |++.+||||++....|+.++||||+||++|||++ |+.||...+.
T Consensus       159 --~~~~~~--------------------------GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~-G~~Pf~~~~~  208 (322)
T d1s9ja_         159 --MANSFV--------------------------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV-GRYPIPPPDA  208 (322)
T ss_dssp             --TC---C--------------------------CSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHH-SSCCSSCCCT
T ss_pred             --cccccc--------------------------CCccccCchHHcCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCCCH
Confidence              001112                          3444556666777789999999999999999999 9999976543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=3.6e-25  Score=221.94  Aligned_cols=156  Identities=19%  Similarity=0.239  Sum_probs=118.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +.+|+|.+++.++.   .+++..++.++.||+.||.|||+++||||||||+|||++.++           ..|+      
T Consensus       123 ~~~g~l~~~l~~~~---~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g-----------~ikL------  182 (350)
T d1rdqe_         123 VAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-----------YIQV------  182 (350)
T ss_dssp             CTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----------CEEE------
T ss_pred             ccccchhhhHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCC-----------CEEe------
Confidence            47899999998876   468999999999999999999999999999999996665554           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.                                                          ++      
T Consensus       183 ------~DFG~a~~----------------------------------------------------------~~------  192 (350)
T d1rdqe_         183 ------TDFGFAKR----------------------------------------------------------VK------  192 (350)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CS------
T ss_pred             ------eeceeeee----------------------------------------------------------cc------
Confidence                  89998861                                                          00      


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                             +..                   ..+.|++.+||||++....|+.++||||+||++|||+| |..||...+..+
T Consensus       193 -------~~~-------------------~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemlt-G~~Pf~~~~~~~  245 (350)
T d1rdqe_         193 -------GRT-------------------WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQ  245 (350)
T ss_dssp             -------SCB-------------------CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -------ccc-------------------ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHh-CCCCCCCcCHHH
Confidence                   000                   00125566777888888899999999999999999999 999999888877


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCH-----HHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSR-----QRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R-----~~aeeLL~~  273 (513)
                      +...+..+....++           .|+..++..|     +.+++++.+
T Consensus       246 ~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H  294 (350)
T d1rdqe_         246 IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             HHHHHHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             HHHHHhcCCCCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC
Confidence            77777655433222           3566666555     367777765

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.8e-25  Score=219.80  Aligned_cols=163  Identities=15%  Similarity=0.275  Sum_probs=113.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ++||||.++|.++... ++++..++.+++||+.||+|||++|||||||||+|||++.++        .....|+      
T Consensus        91 ~~gg~L~~~i~~~~~~-~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~--------~~~~~Kl------  155 (335)
T d2ozaa1          91 LDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR--------PNAILKL------  155 (335)
T ss_dssp             CCSEEHHHHHHSCSCC-CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSS--------TTCCEEE------
T ss_pred             CCCCcHHHHHHhcCCC-CcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccc--------ccccccc------
Confidence            5789999999886543 479999999999999999999999999999999996554422        1223355      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++..                                                          ...+   
T Consensus       156 ------~DFG~a~~~----------------------------------------------------------~~~~---  168 (335)
T d2ozaa1         156 ------TDFGFAKET----------------------------------------------------------TSHN---  168 (335)
T ss_dssp             ------CCCTTCEEC----------------------------------------------------------CCCC---
T ss_pred             ------cccceeeec----------------------------------------------------------cCCC---
Confidence                  888887610                                                          0000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|||.                          +....|+.++||||+||++|||+| |..||.+.+..+
T Consensus       169 -~~~~~~gt~~y~aPE~--------------------------~~~~~y~~~~DiwSlGvily~llt-g~~Pf~~~~~~~  220 (335)
T d2ozaa1         169 -SLTTPCYTPYYVAPEV--------------------------LGPEKYDKSCDMWSLGVIMYILLC-GYPPFYSNHGLA  220 (335)
T ss_dssp             -CCCCCSCCCSSCCCCC--------------------------CCGGGGSHHHHHHHHHHHHHHHTT-SSCSCEETTCC-
T ss_pred             -ccccccCCcccCCcHH--------------------------HcCCCCCHHHHHHhhchhHHHHhh-CCCCCCCCCHHH
Confidence             0011235555555554                          455578999999999999999999 999998766544


Q ss_pred             ecc----ccccccc-cCCC--------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVD----RVQRGII-LEKP--------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~----~i~~~~~-~~~p--------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +..    .+..+.. .+.+              .|+..++..|+++.++|.+
T Consensus       221 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         221 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             -------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            433    3322221 1211              4677889999999999875

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.89  E-value=2.5e-25  Score=215.96  Aligned_cols=164  Identities=20%  Similarity=0.320  Sum_probs=124.6

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|||.++|+.+.   ++++..++.++.||+.||+|||++|||||||||+|||++.++           ..|+      
T Consensus        92 ~~~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~-----------~~kl------  151 (277)
T d1phka_          92 MKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM-----------NIKL------  151 (277)
T ss_dssp             CTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----------CEEE------
T ss_pred             CCCchHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCC-----------CeEE------
Confidence            57899999998765   479999999999999999999999999999999996665554           3355      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-                                                          +....   
T Consensus       152 ------~DFG~a~~----------------------------------------------------------~~~~~---  164 (277)
T d1phka_         152 ------TDFGFSCQ----------------------------------------------------------LDPGE---  164 (277)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CCTTC---
T ss_pred             ------ccchheeE----------------------------------------------------------ccCCC---
Confidence                  88888761                                                          00000   


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ......|+..|+|||++....                    ......|+.++||||+||++|||++ |+.||...+..+
T Consensus       165 -~~~~~~gt~~y~~PE~~~~~~--------------------~~~~~~~~~~~DiwslGvilyeml~-g~~Pf~~~~~~~  222 (277)
T d1phka_         165 -KLREVCGTPSYLAPEIIECSM--------------------NDNHPGYGKEVDMWSTGVIMYTLLA-GSPPFWHRKQML  222 (277)
T ss_dssp             -CBCCCCSCGGGCCHHHHHHHH--------------------CTTSCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -ceeeeeccCCCCCHHHhhccc--------------------cccCCCCCchheEcccchhhhhhcc-CCCCCCCCCHHH
Confidence             012234788888888775422                    1233467899999999999999999 999999888887


Q ss_pred             eccccccccc-cCCC--------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGII-LEKP--------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~-~~~p--------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +.+.+.++.. .+.+              +||..++..|++++++|.+
T Consensus       223 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         223 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             HHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            7777755432 2222              4788888999999998875

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3e-25  Score=219.90  Aligned_cols=158  Identities=15%  Similarity=0.256  Sum_probs=116.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.++++++.   .+++..++.+++||+.||+|||+++||||||||+|||++.++           ..|+      
T Consensus        85 ~~~g~L~~~i~~~~---~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~-----------~~kl------  144 (320)
T d1xjda_          85 LNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG-----------HIKI------  144 (320)
T ss_dssp             CTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-----------CEEE------
T ss_pred             cCCCcHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCC-----------ceec------
Confidence            57899999999876   468899999999999999999999999999999996555443           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-...                                                          ...  
T Consensus       145 ------~DFG~a~~~~~----------------------------------------------------------~~~--  158 (320)
T d1xjda_         145 ------ADFGMCKENML----------------------------------------------------------GDA--  158 (320)
T ss_dssp             ------CCCTTCBCCCC----------------------------------------------------------TTC--
T ss_pred             ------cccchhhhccc----------------------------------------------------------ccc--
Confidence                  88888761000                                                          000  


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                       ...                          ...|++.+||||++....|+.++||||+||++|||++ |+.||.+.+..+
T Consensus       159 -~~~--------------------------~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemlt-G~~PF~~~~~~~  210 (320)
T d1xjda_         159 -KTN--------------------------TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI-GQSPFHGQDEEE  210 (320)
T ss_dssp             -CBC--------------------------CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             -ccc--------------------------ccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHh-CCCCCCCCCHHH
Confidence             000                          0125566677888888899999999999999999999 999999988888


Q ss_pred             eccccccccccCCC-----------CCcCCCCCCHHHHH-HHHc
Q psy17476        241 VVDRVQRGIILEKP-----------KAWYVGDMSRQRAE-SILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p-----------~~w~~~~~~R~~ae-eLL~  272 (513)
                      +...+..+....++           +||..++..|++++ +++.
T Consensus       211 ~~~~i~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         211 LFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             HHHHHHcCCCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            88887655432211           24555555665553 3443

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.89  E-value=6.6e-25  Score=221.22  Aligned_cols=157  Identities=16%  Similarity=0.203  Sum_probs=113.1

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|.++|.++.   .+++..++.+++||+.||+|||+++||||||||+|||++.++           ..|+      
T Consensus        89 ~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g-----------~iKl------  148 (364)
T d1omwa3          89 MNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG-----------HVRI------  148 (364)
T ss_dssp             CCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSS-----------CEEE------
T ss_pred             cCCCcHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCC-----------cEEE------
Confidence            57899999999875   358899999999999999999999999999999996655544           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++.                                                          ....    
T Consensus       149 ------~DFGla~~----------------------------------------------------------~~~~----  160 (364)
T d1omwa3         149 ------SDLGLACD----------------------------------------------------------FSKK----  160 (364)
T ss_dssp             ------CCCTTCEE----------------------------------------------------------CSSS----
T ss_pred             ------eeeceeee----------------------------------------------------------cCCC----
Confidence                  89998760                                                          0000    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcc-cccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLN-YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                       .....                          .|++.+||||++. ...|+.++||||+||++|||+| |+.||...+..
T Consensus       161 -~~~~~--------------------------~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemlt-G~~Pf~~~~~~  212 (364)
T d1omwa3         161 -KPHAS--------------------------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR-GHSPFRQHKTK  212 (364)
T ss_dssp             -CCCSC--------------------------CSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHH-SSCSSCSSCSS
T ss_pred             -ccccc--------------------------ccccccchhHHhhcCCCCCcccchhHHHHHHHHHHh-CCCCCCCCCHH
Confidence             00011                          2455556666665 3468999999999999999999 99999876654


Q ss_pred             eeccccccc--cccCCC------------CCcCCCCCCHHH-----HHHHHcC
Q psy17476        240 EVVDRVQRG--IILEKP------------KAWYVGDMSRQR-----AESILKQ  273 (513)
Q Consensus       240 ~~~~~i~~~--~~~~~p------------~~w~~~~~~R~~-----aeeLL~~  273 (513)
                      +........  .....|            .|+..++..|++     |++++.+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         213 DKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             CHHHHHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             HHHHHHHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence            443322221  111111            467888888887     7888876

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.2e-25  Score=217.17  Aligned_cols=162  Identities=32%  Similarity=0.484  Sum_probs=122.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      +++|+|..++...... .+++..++.++.|||.||+|||+++|+||||||+|||++.+           ..+||      
T Consensus        93 ~~~g~l~~~~~~~~~~-~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~-----------~~~kl------  154 (285)
T d1fmka3          93 MSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-----------LVCKV------  154 (285)
T ss_dssp             CTTCBHHHHHSHHHHT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG-----------GCEEE------
T ss_pred             cCCCchhhhhhhcccc-cchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCC-----------CcEEE------
Confidence            5789999999875433 37999999999999999999999999999999999555444           44566      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++...-                                                 +..           
T Consensus       155 ------~DfGla~~~~~-------------------------------------------------~~~-----------  168 (285)
T d1fmka3         155 ------ADFGLARLIED-------------------------------------------------NEY-----------  168 (285)
T ss_dssp             ------CCCCTTC-------------------------------------------------------------------
T ss_pred             ------cccchhhhccC-------------------------------------------------CCc-----------
Confidence                  89998861000                                                 000           


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ......                          .+++.+||||++....++.++|||||||++|||++.|.+|+......+
T Consensus       169 ~~~~~~--------------------------~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~  222 (285)
T d1fmka3         169 TARQGA--------------------------KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE  222 (285)
T ss_dssp             ---------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             eeeccc--------------------------cccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHH
Confidence            000001                          134555667777777899999999999999999996677777778888


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      ++..+.++.+++.+            +||..++..||++++++.
T Consensus       223 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  266 (285)
T d1fmka3         223 VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA  266 (285)
T ss_dssp             HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            88888877776666            589999999999999765

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.3e-25  Score=217.88  Aligned_cols=162  Identities=31%  Similarity=0.553  Sum_probs=125.5

Q ss_pred             CCCCcHHHHHHhcC-------------CCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCC
Q psy17476          1 MRHGSLLNYLRRHE-------------NTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPD   67 (513)
Q Consensus         1 ~~~g~L~~~l~~~~-------------~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~   67 (513)
                      +++|+|.++|+++.             ....+++..+..+++|||.||.|||+++||||||||+|||++.+         
T Consensus        93 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~---------  163 (309)
T d1fvra_          93 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN---------  163 (309)
T ss_dssp             CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG---------
T ss_pred             cCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCC---------
Confidence            57899999998752             12247899999999999999999999999999999999554443         


Q ss_pred             ccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCC
Q psy17476         68 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKG  147 (513)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (513)
                        ...|+            +|||+++-.....                                                
T Consensus       164 --~~~kl------------~DfG~a~~~~~~~------------------------------------------------  181 (309)
T d1fvra_         164 --YVAKI------------ADFGLSRGQEVYV------------------------------------------------  181 (309)
T ss_dssp             --GCEEE------------CCTTCEESSCEEC------------------------------------------------
T ss_pred             --CceEE------------ccccccccccccc------------------------------------------------
Confidence              44566            8999876110000                                                


Q ss_pred             CEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeee
Q psy17476        148 AEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFT  227 (513)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t  227 (513)
                                    .....                          .+++.+++||++....|+.++|||||||++|||++
T Consensus       182 --------------~~~~~--------------------------~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~  221 (309)
T d1fvra_         182 --------------KKTMG--------------------------RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS  221 (309)
T ss_dssp             --------------CC------------------------------CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred             --------------cccce--------------------------ecCCcccchHHhccCCCCccceeehhHHHHHHHHh
Confidence                          00000                          13344566777777889999999999999999999


Q ss_pred             cCCCCCCCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        228 CGKMPYGRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       228 ~g~~pf~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      .+.+||...+..++.+.+.++.+++.|            +||..++..||++.+++..
T Consensus       222 ~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         222 LGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             TSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCCCCCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            566789988989999999888887766            5899999999999999875

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=5.3e-25  Score=218.23  Aligned_cols=161  Identities=15%  Similarity=0.219  Sum_probs=120.5

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ++||+|.++|.++..  .+++..++.++.||+.||+|||++|||||||||+|||++.++.         ...++      
T Consensus        83 ~~gg~L~~~i~~~~~--~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~---------~~ikl------  145 (321)
T d1tkia_          83 ISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRS---------STIKI------  145 (321)
T ss_dssp             CCCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSC---------CCEEE------
T ss_pred             CCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCc---------eEEEE------
Confidence            478999999987653  3699999999999999999999999999999999966554431         12244      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++-                                                 +..+...          
T Consensus       146 ------~DFG~~~~-------------------------------------------------~~~~~~~----------  160 (321)
T d1tkia_         146 ------IEFGQARQ-------------------------------------------------LKPGDNF----------  160 (321)
T ss_dssp             ------CCCTTCEE-------------------------------------------------CCTTCEE----------
T ss_pred             ------cccchhhc-------------------------------------------------cccCCcc----------
Confidence                  78887650                                                 0000000          


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                         ...                          .+++.+|+||.+....|+.++||||+||++|||++ |..||...+..+
T Consensus       161 ---~~~--------------------------~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~-G~~Pf~~~~~~~  210 (321)
T d1tkia_         161 ---RLL--------------------------FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINPFLAETNQQ  210 (321)
T ss_dssp             ---EEE--------------------------ESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHH-SSCTTCCSSHHH
T ss_pred             ---ccc--------------------------ccccccccchhccCCCCCchhhcccHHHHHHHHHh-CCCCCCCCCHHH
Confidence               000                          13455667777788889999999999999999999 999999988888


Q ss_pred             eccccccccccCC-------C--------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEK-------P--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~-------p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ++..|.++.....       +        .|+..++..|++++++|.+
T Consensus       211 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         211 IIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             HHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            8877765432211       1        5788899999999999875

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2e-24  Score=213.09  Aligned_cols=165  Identities=26%  Similarity=0.451  Sum_probs=119.0

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |++|+|.+++......  +++..+..++.|+|.||.|||+.+|+||||||+|||+           |.+..+|+      
T Consensus       111 ~~~g~l~~~~~~~~~~--~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl-----------~~~~~~kL------  171 (311)
T d1r0pa_         111 MKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML-----------DEKFTVKV------  171 (311)
T ss_dssp             CTTCBHHHHHHCTTCC--CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE-----------CTTCCEEE------
T ss_pred             eecCchhhhhcccccc--chHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeE-----------CCCCCEEE------
Confidence            5789999999876544  4778899999999999999999999999999999544           44455677      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            +|||+++-..-                                                          .    
T Consensus       172 ------~DFG~~~~~~~----------------------------------------------------------~----  183 (311)
T d1r0pa_         172 ------ADFGLARDMYD----------------------------------------------------------K----  183 (311)
T ss_dssp             ------CSSGGGCCTTT----------------------------------------------------------T----
T ss_pred             ------ecccchhhccc----------------------------------------------------------c----
Confidence                  89998871000                                                          0    


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                             .......              .....+++.+||||.+....++.++||||||+++|||+|.|.+|+...+..+
T Consensus       184 -------~~~~~~~--------------~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~  242 (311)
T d1r0pa_         184 -------EFDSVHN--------------KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD  242 (311)
T ss_dssp             -------TCCCTTC--------------TTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------
T ss_pred             -------cccccee--------------cccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH
Confidence                   0000000              0011245566777777778899999999999999999994444445566677


Q ss_pred             eccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        241 VVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       241 ~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      +...+.++.+++.|            +||..++..||++.+++..
T Consensus       243 ~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         243 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            88888888777766            5899999999999998865

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.6e-24  Score=212.07  Aligned_cols=165  Identities=27%  Similarity=0.488  Sum_probs=127.4

Q ss_pred             CCCCcHHHHHHhcCC-------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCc
Q psy17476          1 MRHGSLLNYLRRHEN-------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPK   73 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~-------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~   73 (513)
                      |++|+|.+++..+..       ...+++..+..++.|+|.||.|||+++||||||||+|||+           |.+..+|
T Consensus       105 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLl-----------d~~~~~K  173 (308)
T d1p4oa_         105 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV-----------AEDFTVK  173 (308)
T ss_dssp             CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE-----------CTTCCEE
T ss_pred             cCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceee-----------cCCceEE
Confidence            579999999987531       2246788999999999999999999999999999999544           4445567


Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEe
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVM  153 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  153 (513)
                      |            +|||+++-.                                                          
T Consensus       174 l------------~DFGla~~~----------------------------------------------------------  183 (308)
T d1p4oa_         174 I------------GDFGMTRDI----------------------------------------------------------  183 (308)
T ss_dssp             E------------CCTTCCCGG----------------------------------------------------------
T ss_pred             E------------eecccceec----------------------------------------------------------
Confidence            7            899988610                                                          


Q ss_pred             ecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCC
Q psy17476        154 DDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPY  233 (513)
Q Consensus       154 ~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf  233 (513)
                      ... ...     ..++.+                     .+++.+|+||++....++.++|||||||++|||+|.+.+||
T Consensus       184 ~~~-~~~-----~~~~~~---------------------~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~  236 (308)
T d1p4oa_         184 YET-DYY-----RKGGKG---------------------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY  236 (308)
T ss_dssp             GGG-GCE-----EGGGSS---------------------EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTT
T ss_pred             cCC-cce-----eeccce---------------------ecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCC
Confidence            000 000     001111                     13455677888888899999999999999999999557999


Q ss_pred             CCCCcceeccccccccccCCC------------CCcCCCCCCHHHHHHHHcC
Q psy17476        234 GRLKNTEVVDRVQRGIILEKP------------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ...+..++...+.++.+++.|            +||..++..||++++++..
T Consensus       237 ~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~  288 (308)
T d1p4oa_         237 QGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  288 (308)
T ss_dssp             TTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            999999999988888877665            5899999999999998864

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.6e-24  Score=209.92  Aligned_cols=130  Identities=18%  Similarity=0.275  Sum_probs=93.4

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .+|++.........  .+++..++.+++|++.||+|||+++||||||||+|||++.++           ..|+       
T Consensus        98 ~~~~~~~~~~~~~~--~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~-----------~~kl-------  157 (305)
T d1blxa_          98 DQDLTTYLDKVPEP--GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-----------QIKL-------  157 (305)
T ss_dssp             SCBHHHHHHHSCTT--CSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-----------CEEE-------
T ss_pred             cCCchhhhhhccCC--CCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCC-----------Ceee-------
Confidence            34444433333333  468999999999999999999999999999999996655544           3455       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .|||+++-...                                                                
T Consensus       158 -----~dfg~~~~~~~----------------------------------------------------------------  168 (305)
T d1blxa_         158 -----ADFGLARIYSF----------------------------------------------------------------  168 (305)
T ss_dssp             -----CSCCSCCCCCG----------------------------------------------------------------
T ss_pred             -----cchhhhhhhcc----------------------------------------------------------------
Confidence                 78877651000                                                                


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                            ..   .               .....|++.+||||++....|+.++||||+||++|||++ |+.||...+..+.
T Consensus       169 ------~~---~---------------~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~  223 (305)
T d1blxa_         169 ------QM---A---------------LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ  223 (305)
T ss_dssp             ------GG---G---------------GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHH
T ss_pred             ------cc---c---------------CCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHH-CCCCCCCCCHHHH
Confidence                  00   0               001125666777888888899999999999999999999 9999987776555


Q ss_pred             cccc
Q psy17476        242 VDRV  245 (513)
Q Consensus       242 ~~~i  245 (513)
                      +..+
T Consensus       224 ~~~i  227 (305)
T d1blxa_         224 LGKI  227 (305)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4443

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=4.7e-24  Score=210.57  Aligned_cols=164  Identities=26%  Similarity=0.485  Sum_probs=121.0

Q ss_pred             CCCCcHHHHHHhcCC---------------CCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcccccccc
Q psy17476          1 MRHGSLLNYLRRHEN---------------TLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILW   65 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~---------------~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l   65 (513)
                      +++|+|.++|++...               ...+++..+..++.|||.||+|||+++||||||||+||+++.++      
T Consensus       109 ~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~------  182 (311)
T d1t46a_         109 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR------  182 (311)
T ss_dssp             CTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTT------
T ss_pred             CCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccC------
Confidence            579999999988542               22478899999999999999999999999999999996655544      


Q ss_pred             CCccCCCceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCC
Q psy17476         66 PDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLE  145 (513)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  145 (513)
                           ..++            .|||+++..                                                  
T Consensus       183 -----~~ki------------~DfG~~~~~--------------------------------------------------  195 (311)
T d1t46a_         183 -----ITKI------------CDFGLARDI--------------------------------------------------  195 (311)
T ss_dssp             -----EEEE------------CCCGGGSCT--------------------------------------------------
T ss_pred             -----cccc------------cccchheec--------------------------------------------------
Confidence                 3345            788887610                                                  


Q ss_pred             CCCEEEEeecCCccceeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeee
Q psy17476        146 KGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEV  225 (513)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el  225 (513)
                              ..             ...+...              ..+.+++.+||||++....++.++|||||||++|||
T Consensus       196 --------~~-------------~~~~~~~--------------~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~el  240 (311)
T d1t46a_         196 --------KN-------------DSNYVVK--------------GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL  240 (311)
T ss_dssp             --------TS-------------CTTSEEC--------------SSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             --------cC-------------CCcceEe--------------eecccChHHcCHHHhcCCCCCCcccccchHHHHHHH
Confidence                    00             0000000              001244566778888888899999999999999999


Q ss_pred             eecCCCCCCCCCccee-ccccccccccCCC------------CCcCCCCCCHHHHHHHHc
Q psy17476        226 FTCGKMPYGRLKNTEV-VDRVQRGIILEKP------------KAWYVGDMSRQRAESILK  272 (513)
Q Consensus       226 ~t~g~~pf~~~~~~~~-~~~i~~~~~~~~p------------~~w~~~~~~R~~aeeLL~  272 (513)
                      +|.|.+||...+..+. ...+.++.++..|            .||..++..||++.+++.
T Consensus       241 lt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         241 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            9967777877666444 4555666666655            589999999999999875

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.87  E-value=3.7e-24  Score=207.75  Aligned_cols=161  Identities=17%  Similarity=0.209  Sum_probs=109.3

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      ++||+|.+++.+.+   ++++..++.+++||+.||+|||++|||||||||+|||++.++.           .++      
T Consensus        93 ~~g~~L~~~~~~~~---~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~-----------~~l------  152 (277)
T d1o6ya_          93 VDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA-----------VKV------  152 (277)
T ss_dssp             CCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSC-----------EEE------
T ss_pred             CCCCEehhhhcccC---CCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCcccc-----------cee------
Confidence            47899999998875   4689999999999999999999999999999999976665542           233      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .||+.++.....                                                          ....
T Consensus       153 ------~d~~~~~~~~~~----------------------------------------------------------~~~~  168 (277)
T d1o6ya_         153 ------MDFGIARAIADS----------------------------------------------------------GNSV  168 (277)
T ss_dssp             ------CCCTTCEECC----------------------------------------------------------------
T ss_pred             ------ehhhhhhhhccc----------------------------------------------------------cccc
Confidence                  566554310000                                                          0000


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ....                          .+.|++.+||||++....|+.++||||+||++|||+| |..||...+..+
T Consensus       169 ~~~~--------------------------~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyellt-G~~Pf~~~~~~~  221 (277)
T d1o6ya_         169 TQTA--------------------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSPVS  221 (277)
T ss_dssp             ------------------------------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCSCCCSSHHH
T ss_pred             cccc--------------------------cccCcccccCHHHHcCCCCCcceecccchHHHHHHHh-CCCCCCCcCHHH
Confidence            0000                          1125566667777777789999999999999999999 999999887766


Q ss_pred             eccccccccccCCC---------------CCcCCCCCCHH-HHHHHHc
Q psy17476        241 VVDRVQRGIILEKP---------------KAWYVGDMSRQ-RAESILK  272 (513)
Q Consensus       241 ~~~~i~~~~~~~~p---------------~~w~~~~~~R~-~aeeLL~  272 (513)
                      +...+.+....+..               +|+..++..|+ ++++++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~  269 (277)
T d1o6ya_         222 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA  269 (277)
T ss_dssp             HHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             HHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHH
Confidence            66555433222111               35667777776 5565543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7.2e-24  Score=208.03  Aligned_cols=130  Identities=15%  Similarity=0.137  Sum_probs=89.6

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .+|++ .++.....  .+++..++.+++||++||+|||++|||||||||+|||++.++           ..|+       
T Consensus        83 ~~~~~-~~~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~-----------~~KL-------  141 (299)
T d1ua2a_          83 ETDLE-VIIKDNSL--VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG-----------VLKL-------  141 (299)
T ss_dssp             SEEHH-HHHTTCCS--SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-----------CEEE-------
T ss_pred             cchHH-hhhhhccc--CCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCC-----------cccc-------
Confidence            34444 44444333  468889999999999999999999999999999996655544           3355       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .|||+++...-                                                          ...   
T Consensus       142 -----~DFG~a~~~~~----------------------------------------------------------~~~---  155 (299)
T d1ua2a_         142 -----ADFGLAKSFGS----------------------------------------------------------PNR---  155 (299)
T ss_dssp             -----CCCGGGSTTTS----------------------------------------------------------CCC---
T ss_pred             -----ccCccccccCC----------------------------------------------------------Ccc---
Confidence                 88888761000                                                          000   


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc-ccccccCccccceeeeeeeeecCCCCCCCCCcce
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY-TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTE  240 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~  240 (513)
                      ......||..                          +||||++.. ..|+.++||||+||++|||++ |..||...+..+
T Consensus       156 ~~~~~~gt~~--------------------------y~aPE~~~~~~~~~~~~DiwSlGvil~el~~-g~~pf~~~~~~~  208 (299)
T d1ua2a_         156 AYTHQVVTRW--------------------------YRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLD  208 (299)
T ss_dssp             CCCCSCCCCT--------------------------TCCHHHHTTCSCCCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHH
T ss_pred             cccceecChh--------------------------hccHHHHccCCCCChhhhhhhcchHHHHHHh-CcCCCCCCCHHH
Confidence            0001123444                          455555543 457999999999999999999 999998877666


Q ss_pred             ecccc
Q psy17476        241 VVDRV  245 (513)
Q Consensus       241 ~~~~i  245 (513)
                      ++..+
T Consensus       209 ~l~~i  213 (299)
T d1ua2a_         209 QLTRI  213 (299)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55444

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.7e-23  Score=202.70  Aligned_cols=153  Identities=18%  Similarity=0.282  Sum_probs=104.8

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      +|+|.+++.++.   .+++..++.+++||+.||+|||+++||||||||+|||++.+          ....|+        
T Consensus        94 ~~~l~~~~~~~~---~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~----------~~~vkl--------  152 (273)
T d1xwsa_          94 VQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN----------RGELKL--------  152 (273)
T ss_dssp             EEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT----------TTEEEE--------
T ss_pred             cchHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecC----------CCeEEE--------
Confidence            368888888765   46899999999999999999999999999999999655433          223345        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++-                                                          ....     .
T Consensus       153 ----~DFG~a~~----------------------------------------------------------~~~~-----~  165 (273)
T d1xwsa_         153 ----IDFGSGAL----------------------------------------------------------LKDT-----V  165 (273)
T ss_dssp             ----CCCTTCEE----------------------------------------------------------CCSS-----C
T ss_pred             ----Ccccccee----------------------------------------------------------cccc-----c
Confidence                78888750                                                          0000     0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccc-cccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRF-SSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      .....||..|+|                          ||++....+ +.++||||+||++|||+| |+.||...+.  +
T Consensus       166 ~~~~~GT~~y~a--------------------------PE~~~~~~~~~~~~DiwSlGvilyell~-g~~Pf~~~~~--i  216 (273)
T d1xwsa_         166 YTDFDGTRVYSP--------------------------PEWIRYHRYHGRSAAVWSLGILLYDMVC-GDIPFEHDEE--I  216 (273)
T ss_dssp             BCCCCSCGGGSC--------------------------HHHHHHSCBCHHHHHHHHHHHHHHHHHH-SSCSCCSHHH--H
T ss_pred             ccccccCCCcCC--------------------------HHHHcCCCCCCcccccccceeeehhHhh-CCCCCCCchH--H
Confidence            011224555555                          554544444 677999999999999999 9999975431  1


Q ss_pred             ccccccccccCCC--------CCcCCCCCCHHHHHHHHcC
Q psy17476        242 VDRVQRGIILEKP--------KAWYVGDMSRQRAESILKQ  273 (513)
Q Consensus       242 ~~~i~~~~~~~~p--------~~w~~~~~~R~~aeeLL~~  273 (513)
                      ..... ..+...+        +||..++..|++++++|.+
T Consensus       217 ~~~~~-~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         217 IRGQV-FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             HHCCC-CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hhccc-CCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            11000 0000111        5788999999999999976

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=7.2e-23  Score=201.16  Aligned_cols=66  Identities=27%  Similarity=0.345  Sum_probs=55.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh--------cceeccccCcccccccCccccccccCCccCCC
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER--------HNYIHRETKKSLYPSSLNEISFILWPDQMIRP   72 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~--------~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~   72 (513)
                      |++|+|.++|+++    ++++..+..++.|+|.||+|||+        ++||||||||+||||+.+           ..+
T Consensus        83 ~~~g~L~~~l~~~----~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~-----------~~~  147 (303)
T d1vjya_          83 HEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-----------GTC  147 (303)
T ss_dssp             CTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTT-----------SCE
T ss_pred             ccCCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCC-----------CCe
Confidence            5799999999875    36889999999999999999996        599999999999555444           455


Q ss_pred             ceEEEeccccccCCCCccccc
Q psy17476         73 KVVVALYPFKAIEGGDLSLEK   93 (513)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~   93 (513)
                      ||            +|||+++
T Consensus       148 Kl------------~DFGl~~  156 (303)
T d1vjya_         148 CI------------ADLGLAV  156 (303)
T ss_dssp             EE------------CCCTTCE
T ss_pred             EE------------EecCccc
Confidence            66            8999887

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3.2e-23  Score=207.58  Aligned_cols=55  Identities=18%  Similarity=0.246  Sum_probs=47.9

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +.+|||.+++..+    ++++..++.+++|+++||+|||++|||||||||+|||++.++
T Consensus        92 ~~~g~L~~~l~~~----~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~  146 (345)
T d1pmea_          92 LMGADLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC  146 (345)
T ss_dssp             CCCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             ecCCchhhhhhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCC
Confidence            3689999999765    368999999999999999999999999999999996555443

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=5.3e-23  Score=201.75  Aligned_cols=166  Identities=16%  Similarity=0.172  Sum_probs=110.7

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .+|+|.+++......  +++..+..++.|++.||+|||++|||||||||+|||++..+        .....++       
T Consensus        85 ~~~~l~~~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~--------~~~~vkl-------  147 (299)
T d1ckia_          85 LGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK--------KGNLVYI-------  147 (299)
T ss_dssp             CCCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGG--------GTTCEEE-------
T ss_pred             cCCchhhhhhhccCC--CcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccC--------CCceeee-------
Confidence            468888888776654  58889999999999999999999999999999996654432        2223344       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .|||+++.                                                          .......  
T Consensus       148 -----~DFG~a~~----------------------------------------------------------~~~~~~~--  162 (299)
T d1ckia_         148 -----IDFGLAKK----------------------------------------------------------YRDARTH--  162 (299)
T ss_dssp             -----CCCSSCEE----------------------------------------------------------CBCTTTC--
T ss_pred             -----eccCccee----------------------------------------------------------ccccccc--
Confidence                 78888761                                                          0000000  


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                            ....+...              ..+.|++.+||||++....|+.++|||||||++|||+| |..||........
T Consensus       163 ------~~~~~~~~--------------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~t-g~~P~~~~~~~~~  221 (299)
T d1ckia_         163 ------QHIPYREN--------------KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNL-GSLPWQGLKAATK  221 (299)
T ss_dssp             ------CBCCCCBC--------------CSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHH-SSCTTCCCC----
T ss_pred             ------cceecccc--------------CCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHh-CCCcccccchHHH
Confidence                  00000000              11346777788888888899999999999999999999 9999987666554


Q ss_pred             ccccccc----ccc-------CCC--------CCcCCCCCCHHHHHHH
Q psy17476        242 VDRVQRG----IIL-------EKP--------KAWYVGDMSRQRAESI  270 (513)
Q Consensus       242 ~~~i~~~----~~~-------~~p--------~~w~~~~~~R~~aeeL  270 (513)
                      ...+.+.    ...       ..|        .||..++..||++.++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i  269 (299)
T d1ckia_         222 RQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYL  269 (299)
T ss_dssp             ---HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHH
T ss_pred             HHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            4433211    011       111        5788889999877654

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=7.2e-23  Score=200.71  Aligned_cols=56  Identities=21%  Similarity=0.335  Sum_probs=46.8

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +|++.+++...... ++++..++.++.|++.||+|||++|||||||||+|||++.++
T Consensus        84 ~~~~~~~~~~~~~~-~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~  139 (298)
T d1gz8a_          84 HQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG  139 (298)
T ss_dssp             SEEHHHHHHHTTTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             CCchhhhhhhhccc-CCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccC
Confidence            56777777665443 579999999999999999999999999999999996655544

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.3e-22  Score=201.02  Aligned_cols=160  Identities=19%  Similarity=0.207  Sum_probs=113.8

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYP   80 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~   80 (513)
                      |.+|+|.+++..+..   +++..++.+++|++.||+|||+++||||||||+|||++.++           ..++      
T Consensus       111 ~~~~~L~~~i~~~~~---~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~-----------~vkL------  170 (322)
T d1vzoa_         111 INGGELFTHLSQRER---FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG-----------HVVL------  170 (322)
T ss_dssp             CCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-----------CEEE------
T ss_pred             ccccHHHHHHHhccc---ccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCC-----------CEEE------
Confidence            578999999998863   47889999999999999999999999999999996555543           3455      


Q ss_pred             ccccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHW  160 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (513)
                            .|||+++.-                                                          ..     
T Consensus       171 ------~DFG~a~~~----------------------------------------------------------~~-----  181 (322)
T d1vzoa_         171 ------TDFGLSKEF----------------------------------------------------------VA-----  181 (322)
T ss_dssp             ------SCSSEEEEC----------------------------------------------------------CG-----
T ss_pred             ------eeccchhhh----------------------------------------------------------cc-----
Confidence                  788877500                                                          00     


Q ss_pred             eeeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccc--cccccCccccceeeeeeeeecCCCCCCCCCc
Q psy17476        161 WKVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYT--RFSSKSDVWAYGVLMWEVFTCGKMPYGRLKN  238 (513)
Q Consensus       161 ~~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~  238 (513)
                             ..... ..               ...|++.+++||++...  .++.++||||+||++|||++ |..||...+.
T Consensus       182 -------~~~~~-~~---------------~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyellt-G~~PF~~~~~  237 (322)
T d1vzoa_         182 -------DETER-AY---------------DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT-GASPFTVDGE  237 (322)
T ss_dssp             -------GGGGG-GC---------------GGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHH-SSCTTSCTTS
T ss_pred             -------ccccc-cc---------------ccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHh-CCCCCCCCCH
Confidence                   00000 00               01245566677777543  46889999999999999999 9999988877


Q ss_pred             ceecccccccc---ccCCC------------CCcCCCCCCHH-----HHHHHHcC
Q psy17476        239 TEVVDRVQRGI---ILEKP------------KAWYVGDMSRQ-----RAESILKQ  273 (513)
Q Consensus       239 ~~~~~~i~~~~---~~~~p------------~~w~~~~~~R~-----~aeeLL~~  273 (513)
                      .+....+.++.   .++.|            +||..++..|+     .++++|.+
T Consensus       238 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H  292 (322)
T d1vzoa_         238 KNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  292 (322)
T ss_dssp             CCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             HHHHHHHHHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence            77766664432   22222            46778888887     47888865

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.83  E-value=2.2e-22  Score=196.76  Aligned_cols=137  Identities=16%  Similarity=0.106  Sum_probs=98.1

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEeccc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPF   81 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   81 (513)
                      .+|+|.+++......  +++..+..++.|++.||+|||++|||||||||+|||++.+..      ......++       
T Consensus        83 ~~~~l~~~~~~~~~~--~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~------~~~~~vkl-------  147 (293)
T d1csna_          83 LGPSLEDLLDLCGRK--FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNS------KNANMIYV-------  147 (293)
T ss_dssp             CCCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSS------TTTTCEEE-------
T ss_pred             cCCCHHHHHHhhccc--hhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCccc------ccCCceEE-------
Confidence            479999999886654  588899999999999999999999999999999976654210      01122344       


Q ss_pred             cccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccce
Q psy17476         82 KAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW  161 (513)
Q Consensus        82 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (513)
                           .|||+++-.                                                          ...     
T Consensus       148 -----~DFG~a~~~----------------------------------------------------------~~~-----  159 (293)
T d1csna_         148 -----VDFGMVKFY----------------------------------------------------------RDP-----  159 (293)
T ss_dssp             -----CCCTTCEES----------------------------------------------------------BCT-----
T ss_pred             -----cccceeEEc----------------------------------------------------------ccC-----
Confidence                 788887610                                                          000     


Q ss_pred             eeecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCcc
Q psy17476        162 KVKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNT  239 (513)
Q Consensus       162 ~~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~  239 (513)
                            .+....+..           ....+.|++.+||||++....++.++||||+||++|||+| |..||......
T Consensus       160 ------~~~~~~~~~-----------~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~ellt-g~~Pf~~~~~~  219 (293)
T d1csna_         160 ------VTKQHIPYR-----------EKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLR-GSLPWQGLKAA  219 (293)
T ss_dssp             ------TTCCBCCCC-----------CCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTSSCCSC
T ss_pred             ------ccccceeec-----------ccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHh-CCCcCCCccch
Confidence                  000000000           0012347778888888888899999999999999999999 99999866544

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.8e-22  Score=202.35  Aligned_cols=130  Identities=15%  Similarity=0.139  Sum_probs=88.9

Q ss_pred             CcHHHHHHh-cCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          4 GSLLNYLRR-HENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         4 g~L~~~l~~-~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      |++.+.+.. .....++++..++.+++||++||+|||++|||||||||+|||++.++          ...|+        
T Consensus       103 ~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~----------~~~kl--------  164 (350)
T d1q5ka_         103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT----------AVLKL--------  164 (350)
T ss_dssp             EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTT----------CCEEE--------
T ss_pred             CccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCC----------CceeE--------
Confidence            444444443 22233579999999999999999999999999999999996555442          33455        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .|||+++-                                                          ......    
T Consensus       165 ----~DFG~a~~----------------------------------------------------------~~~~~~----  178 (350)
T d1q5ka_         165 ----CDFGSAKQ----------------------------------------------------------LVRGEP----  178 (350)
T ss_dssp             ----CCCTTCEE----------------------------------------------------------CCTTSC----
T ss_pred             ----ecccchhh----------------------------------------------------------ccCCcc----
Confidence                88888750                                                          000000    


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcc-cccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLN-YTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      .....|                          ++.++|||.+. ...|+.++||||+||++|||++ |+.||...+..+.
T Consensus       179 ~~~~~g--------------------------t~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~-g~~pf~~~~~~~~  231 (350)
T d1q5ka_         179 NVSYIC--------------------------SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQ  231 (350)
T ss_dssp             CCSCCS--------------------------CTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH-TSCSSCCSSHHHH
T ss_pred             cccccc--------------------------cccccChHHhhcccCCCcceeecccceEEEehhh-CCCCCCCCCHHHH
Confidence            001113                          34445555544 3578999999999999999999 9999987766554


Q ss_pred             ccc
Q psy17476        242 VDR  244 (513)
Q Consensus       242 ~~~  244 (513)
                      +..
T Consensus       232 l~~  234 (350)
T d1q5ka_         232 LVE  234 (350)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            433

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.82  E-value=4.2e-22  Score=193.95  Aligned_cols=55  Identities=20%  Similarity=0.217  Sum_probs=44.9

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +|.+...+.+...  .+++..++.+++||+.||+|||+++||||||||+|||++.++
T Consensus        83 ~~~~~~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~  137 (286)
T d1ob3a_          83 DQDLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG  137 (286)
T ss_dssp             SEEHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             hhhhHHHHHhhcC--CcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCC
Confidence            4555566655444  469999999999999999999999999999999996665554

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=6.8e-22  Score=195.44  Aligned_cols=132  Identities=14%  Similarity=0.155  Sum_probs=89.0

Q ss_pred             cHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccccc
Q psy17476          5 SLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFKAI   84 (513)
Q Consensus         5 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   84 (513)
                      ++...+......  +++..++.+++|++.||.|||+++||||||||+|||++.++           ..|+          
T Consensus       102 ~~~~~~~~~~~~--~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~-----------~~kl----------  158 (318)
T d3blha1         102 DLAGLLSNVLVK--FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG-----------VLKL----------  158 (318)
T ss_dssp             EHHHHHTCTTCC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS-----------CEEE----------
T ss_pred             Cccchhhhcccc--cccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCC-----------cEEe----------
Confidence            344444444433  58889999999999999999999999999999997666654           3355          


Q ss_pred             CCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeee
Q psy17476         85 EGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK  164 (513)
Q Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  164 (513)
                        +|||+++--                                                 .....        .......
T Consensus       159 --~dfg~~~~~-------------------------------------------------~~~~~--------~~~~~~~  179 (318)
T d3blha1         159 --ADFGLARAF-------------------------------------------------SLAKN--------SQPNRYT  179 (318)
T ss_dssp             --CCCTTCEEC-------------------------------------------------CC-------------CCCCC
T ss_pred             --eecceeeec-------------------------------------------------ccccc--------ccccccc
Confidence              788887500                                                 00000        0000000


Q ss_pred             cCCCccccccCCceeeccccccccccCCCCchhhhhhhhccc-ccccccCccccceeeeeeeeecCCCCCCCCCcceecc
Q psy17476        165 DKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNY-TRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEVVD  243 (513)
Q Consensus       165 ~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~~~  243 (513)
                      ...                          |++.++|||++.. ..|+.++||||+||++|||++ |+.||.+.+..+...
T Consensus       180 ~~~--------------------------gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~-g~~pf~~~~~~~~~~  232 (318)
T d3blha1         180 NRV--------------------------VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLA  232 (318)
T ss_dssp             SCC--------------------------SCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHH
T ss_pred             cee--------------------------cCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhh-CCCCCCCCCHHHHHH
Confidence            112                          3444555666554 368999999999999999999 999998776655544


Q ss_pred             cc
Q psy17476        244 RV  245 (513)
Q Consensus       244 ~i  245 (513)
                      .+
T Consensus       233 ~i  234 (318)
T d3blha1         233 LI  234 (318)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.5e-21  Score=195.21  Aligned_cols=53  Identities=17%  Similarity=0.199  Sum_probs=44.4

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +++|..++++.    .+++..++.+++||+.||+|||++|||||||||+|||++.++
T Consensus       106 ~~~l~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~  158 (346)
T d1cm8a_         106 GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC  158 (346)
T ss_dssp             SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             cccHHHHHHhc----cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhccccc
Confidence            45677766543    368999999999999999999999999999999996665554

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2e-21  Score=194.42  Aligned_cols=55  Identities=18%  Similarity=0.228  Sum_probs=48.4

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      +.+|+|.+++..+    .+++..++.+++||+.||+|||++|||||||||+|||++.++
T Consensus       104 ~~gg~L~~~~~~~----~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~  158 (348)
T d2gfsa1         104 LMGADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC  158 (348)
T ss_dssp             CCSEEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             ecCCchhhhcccc----cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccc
Confidence            4689999999654    368999999999999999999999999999999997666654

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=7.4e-21  Score=185.35  Aligned_cols=55  Identities=15%  Similarity=0.167  Sum_probs=45.6

Q ss_pred             CCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476          2 RHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         2 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      .+|+|..++..+.   .+++..++.+++|++.||+|||+++||||||||+|||++.++
T Consensus        84 ~~~~l~~~~~~~~---~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~  138 (292)
T d1unla_          84 DQDLKKYFDSCNG---DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG  138 (292)
T ss_dssp             SEEHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             ccccccccccccc---ccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCC
Confidence            4677777666554   358889999999999999999999999999999996665544

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.6e-20  Score=188.40  Aligned_cols=122  Identities=16%  Similarity=0.154  Sum_probs=86.6

Q ss_pred             CCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCccccccccCCccCCCceEEEecccc
Q psy17476          3 HGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNEISFILWPDQMIRPKVVVALYPFK   82 (513)
Q Consensus         3 ~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   82 (513)
                      .|+|.+.+.+     .+++..++.+++||+.||+|||++||+||||||+|||++.++.           .++        
T Consensus       105 ~~~l~~~~~~-----~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~-----------~kl--------  160 (355)
T d2b1pa1         105 DANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----------LKI--------  160 (355)
T ss_dssp             SEEHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC-----------EEE--------
T ss_pred             chHHHHhhhc-----CCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccc-----------eee--------
Confidence            4566666643     3588999999999999999999999999999999976666542           233        


Q ss_pred             ccCCCCcccccCCeEEeeecCccceeeeeccCCCCCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCcccee
Q psy17476         83 AIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGIRKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWK  162 (513)
Q Consensus        83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (513)
                          .||++++-...                                                 +.             .
T Consensus       161 ----~df~~~~~~~~-------------------------------------------------~~-------------~  174 (355)
T d2b1pa1         161 ----LDFGLARTAGT-------------------------------------------------SF-------------M  174 (355)
T ss_dssp             ----CCCCC-----------------------------------------------------------------------
T ss_pred             ----echhhhhcccc-------------------------------------------------cc-------------c
Confidence                67776551000                                                 00             0


Q ss_pred             eecCCCccccccCCceeeccccccccccCCCCchhhhhhhhcccccccccCccccceeeeeeeeecCCCCCCCCCccee
Q psy17476        163 VKDKNGSVGYIPSNYVKEKELLGLQKYDDVNGLTLELIHQVLNYTRFSSKSDVWAYGVLMWEVFTCGKMPYGRLKNTEV  241 (513)
Q Consensus       163 ~~~~~g~~g~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Dvws~G~~l~el~t~g~~pf~~~~~~~~  241 (513)
                      ...                          ..+++.++|||++....++.++||||+||++|||++ |+.||...+....
T Consensus       175 ~~~--------------------------~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~-g~~pF~~~~~~~~  226 (355)
T d2b1pa1         175 MTP--------------------------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ  226 (355)
T ss_dssp             --------------------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHH
T ss_pred             ccc--------------------------ccccccccChhhhcCCCCCCCcccccccchHHHHhh-CCCCCCCCCHHHH
Confidence            000                          113455677888888899999999999999999999 9999976654433

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.76  E-value=2.6e-20  Score=184.74  Aligned_cols=52  Identities=10%  Similarity=0.046  Sum_probs=43.7

Q ss_pred             CCCCcHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCc
Q psy17476          1 MRHGSLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLN   58 (513)
Q Consensus         1 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~   58 (513)
                      +++|+|.++.+      .+++..++.+++||+.||+|||++|||||||||+|||++.+
T Consensus       114 ~~~~~L~~~~~------~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~  165 (328)
T d3bqca1         114 VNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE  165 (328)
T ss_dssp             CCSCBGGGTTT------SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT
T ss_pred             cCCCcHHHHhc------CCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCC
Confidence            46788866532      36899999999999999999999999999999999766543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=5.6e-18  Score=169.80  Aligned_cols=54  Identities=20%  Similarity=0.330  Sum_probs=42.3

Q ss_pred             cHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHh-cceeccccCcccccccCcc
Q psy17476          5 SLLNYLRRHENTLGGNVGLLLDMCIQVCKGMAYLER-HNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus         5 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~gl~ylH~-~~iiHrdikp~N~~~~~~~   59 (513)
                      +...+....... .+++..++.+++||+.||+|||+ +||+||||||+|||++.++
T Consensus       109 ~~~~~~~~~~~~-~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~  163 (362)
T d1q8ya_         109 NLLALIKKYEHR-GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVD  163 (362)
T ss_dssp             EHHHHHHHTTTS-CCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEE
T ss_pred             cccccccccccc-CCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccC
Confidence            344444443332 46889999999999999999998 8899999999997766554

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.64  E-value=1.5e-16  Score=154.19  Aligned_cols=89  Identities=37%  Similarity=0.740  Sum_probs=78.4

Q ss_pred             CCCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecC---CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCe
Q psy17476        420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG---TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       420 ~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~---~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  496 (513)
                      ..+.|+++.++|++.+.||+|+||.||+|+++.++..+|+|..   ....++|.+|+++|++++|||||+++|+|.+++.
T Consensus         8 ~~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   87 (287)
T d1opja_           8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP   87 (287)
T ss_dssp             TCCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             CCcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCe
Confidence            3578999999999999999999999999999876666655532   3346789999999999999999999999999999


Q ss_pred             eEEEEccCCCCc
Q psy17476        497 IYIVTDTSSFRL  508 (513)
Q Consensus       497 ~~lV~E~~~~Gl  508 (513)
                      +|||||||++|.
T Consensus        88 ~~iv~E~~~~g~   99 (287)
T d1opja_          88 FYIITEFMTYGN   99 (287)
T ss_dssp             CEEEEECCTTCB
T ss_pred             eEEEeecccCcc
Confidence            999999999874

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=6.3e-16  Score=149.53  Aligned_cols=94  Identities=49%  Similarity=0.794  Sum_probs=79.7

Q ss_pred             CCcccCCCCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEE
Q psy17476        414 PATAGLSHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVC  491 (513)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~  491 (513)
                      |+..++..+.|+++.++|++.+.||+|+||+||+|+++++..||+++.  .....+.|.+|+.+|++++|||||+++|+|
T Consensus         2 ~~~~~~~~~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~   81 (285)
T d1fmka3           2 PQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV   81 (285)
T ss_dssp             CCCSSSSTTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCCCCCCCcceEcCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEE
Confidence            344567789999999999999999999999999999988766655442  333457899999999999999999999998


Q ss_pred             EeCCeeEEEEccCCCCc
Q psy17476        492 SKHRPIYIVTDTSSFRL  508 (513)
Q Consensus       492 ~~~~~~~lV~E~~~~Gl  508 (513)
                      .+ +.+++|||||++|.
T Consensus        82 ~~-~~~~lv~Ey~~~g~   97 (285)
T d1fmka3          82 SE-EPIYIVTEYMSKGS   97 (285)
T ss_dssp             CS-SSCEEEECCCTTCB
T ss_pred             ec-CCeEEEEEecCCCc
Confidence            54 56899999999984

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=9.1e-16  Score=147.46  Aligned_cols=88  Identities=44%  Similarity=0.738  Sum_probs=75.6

Q ss_pred             CCCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCee
Q psy17476        420 SHDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       420 ~~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      ..+.|+++.++|++.+.||+|+||.||+|.+++...||+++.  .....+.|.+|+++|++++|||||+++|+|.+ +.+
T Consensus         4 ~~~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~   82 (272)
T d1qpca_           4 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPI   82 (272)
T ss_dssp             TTCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             CCCCeecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCe
Confidence            467899999999999999999999999999887656655442  33456789999999999999999999998865 567


Q ss_pred             EEEEccCCCCc
Q psy17476        498 YIVTDTSSFRL  508 (513)
Q Consensus       498 ~lV~E~~~~Gl  508 (513)
                      |||||||++|.
T Consensus        83 ~iv~Ey~~~g~   93 (272)
T d1qpca_          83 YIITEYMENGS   93 (272)
T ss_dssp             EEEEECCTTCB
T ss_pred             EEEEEeCCCCc
Confidence            99999999975

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=5.9e-15  Score=140.96  Aligned_cols=83  Identities=51%  Similarity=0.849  Sum_probs=71.8

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCceeeEEeec--CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE--GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      ++.++|++.+.||+|+||.||+|.+.++..||+++.  .....++|.+|+++|++++|||||+++|+|..++.++|||||
T Consensus         2 idp~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~   81 (263)
T d1sm2a_           2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   81 (263)
T ss_dssp             BCCSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             CChHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEe
Confidence            456789999999999999999999987666655543  334567899999999999999999999999999999999999


Q ss_pred             CCCCc
Q psy17476        504 SSFRL  508 (513)
Q Consensus       504 ~~~Gl  508 (513)
                      |++|-
T Consensus        82 ~~~g~   86 (263)
T d1sm2a_          82 MEHGC   86 (263)
T ss_dssp             CTTCB
T ss_pred             cCCCc
Confidence            99874

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=4.1e-15  Score=141.65  Aligned_cols=82  Identities=62%  Similarity=1.075  Sum_probs=71.2

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEee--cCCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccC
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMK--EGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS  504 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k--~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~  504 (513)
                      +.++|++.+.||+|+||+||+|++++...||+++  ......++|++|+.+|++++|||||+++|+|.+++.+++|||||
T Consensus         2 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~   81 (258)
T d1k2pa_           2 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM   81 (258)
T ss_dssp             CCCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred             ChHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence            4578999999999999999999997665555443  34456788999999999999999999999999999999999999


Q ss_pred             CCCc
Q psy17476        505 SFRL  508 (513)
Q Consensus       505 ~~Gl  508 (513)
                      ++|.
T Consensus        82 ~~g~   85 (258)
T d1k2pa_          82 ANGC   85 (258)
T ss_dssp             TTEE
T ss_pred             CCCc
Confidence            9875

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=4.4e-15  Score=142.86  Aligned_cols=85  Identities=29%  Similarity=0.562  Sum_probs=69.4

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC---CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeE
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM---SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIY  498 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~---~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  498 (513)
                      +.|+++.++|++.+.||+|+||.||+|++++..++++++....   ..+.|.+|+.+|++++|||||+++|++.+ +.++
T Consensus         1 ddwei~~~~~~~~~~lG~G~fg~Vy~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~   79 (276)
T d1uwha_           1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLA   79 (276)
T ss_dssp             CCCBCCTTCCCCCSEEEECSSCEEEEEESSSEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred             CCcccccccEEEEEEEeeCCCcEEEEEEECCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEE
Confidence            5799999999999999999999999998876433333322221   23579999999999999999999998864 5689


Q ss_pred             EEEccCCCC
Q psy17476        499 IVTDTSSFR  507 (513)
Q Consensus       499 lV~E~~~~G  507 (513)
                      ||||||+||
T Consensus        80 lv~Ey~~~g   88 (276)
T d1uwha_          80 IVTQWCEGS   88 (276)
T ss_dssp             EEEECCCEE
T ss_pred             EEEecCCCC
Confidence            999999975

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.2e-14  Score=138.65  Aligned_cols=85  Identities=40%  Similarity=0.638  Sum_probs=69.6

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecC-CCCHHHHHHHHHHHhcCCCCceeceeeEEEe-CCeeEEE
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG-TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSK-HRPIYIV  500 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~-~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~~lV  500 (513)
                      .|+++.++|++.+.||+|+||.||+|.++++ .||+++.. ....+.|.+|+++|++++|||||+++|+|.+ .+.+|||
T Consensus         1 ~w~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~-~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv   79 (262)
T d1byga_           1 GWALNMKELKLLQTIGKGEFGDVMLGDYRGN-KVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV   79 (262)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEETTE-EEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred             CCccCHHHeEEeEEEecCCCeEEEEEEECCe-EEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEE
Confidence            4999999999999999999999999998654 45544432 2235679999999999999999999999965 4568999


Q ss_pred             EccCCCCc
Q psy17476        501 TDTSSFRL  508 (513)
Q Consensus       501 ~E~~~~Gl  508 (513)
                      ||||++|.
T Consensus        80 ~ey~~~g~   87 (262)
T d1byga_          80 TEYMAKGS   87 (262)
T ss_dssp             ECCCTTEE
T ss_pred             EeccCCCC
Confidence            99999974

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.5e-14  Score=142.32  Aligned_cols=84  Identities=23%  Similarity=0.229  Sum_probs=72.6

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-----CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-----MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-----~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      ++..++|++.+.||+|+||.||+|+++.++..+|+|...     ...+.+.+|+.+|++++|||||+++++|.+++.+||
T Consensus         2 el~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~i   81 (322)
T d1s9ja_           2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI   81 (322)
T ss_dssp             CCCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEE
T ss_pred             CCCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            567789999999999999999999998777777666322     113578999999999999999999999999999999


Q ss_pred             EEccCCCCc
Q psy17476        500 VTDTSSFRL  508 (513)
Q Consensus       500 V~E~~~~Gl  508 (513)
                      |||||+||.
T Consensus        82 VmEy~~gg~   90 (322)
T d1s9ja_          82 CMEHMDGGS   90 (322)
T ss_dssp             EEECCTTEE
T ss_pred             EEEcCCCCc
Confidence            999999864

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.6e-14  Score=139.64  Aligned_cols=81  Identities=20%  Similarity=0.297  Sum_probs=69.9

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCC----CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT----MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~----~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      .+.|++.+.||+|+||.||+|+++.++..+|+|...    ...+.|.+|+++|++++|||||++++++.+++.+||||||
T Consensus        11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy   90 (288)
T d2jfla1          11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   90 (288)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence            356899999999999999999998877766666322    2235799999999999999999999999999999999999


Q ss_pred             CCCCc
Q psy17476        504 SSFRL  508 (513)
Q Consensus       504 ~~~Gl  508 (513)
                      |+||.
T Consensus        91 ~~~g~   95 (288)
T d2jfla1          91 CAGGA   95 (288)
T ss_dssp             CTTEE
T ss_pred             CCCCc
Confidence            99975

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.48  E-value=2.5e-14  Score=139.17  Aligned_cols=84  Identities=29%  Similarity=0.478  Sum_probs=68.1

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCcee---eEEeecC-C-CC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCe
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGSID---VAMMKEG-T-MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRP  496 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~---v~~~k~~-~-~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  496 (513)
                      +++.++|++.+.||+|+||+||+|.++.++.   .+++|.. . ..   .+.|.+|+++|++++|||||+++|+|..++.
T Consensus        22 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  101 (299)
T d1jpaa_          22 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTP  101 (299)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             hhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence            4667789999999999999999999865432   3344432 2 22   2469999999999999999999999999999


Q ss_pred             eEEEEccCCCCc
Q psy17476        497 IYIVTDTSSFRL  508 (513)
Q Consensus       497 ~~lV~E~~~~Gl  508 (513)
                      +|||||||++|.
T Consensus       102 ~~iv~Ey~~~g~  113 (299)
T d1jpaa_         102 VMIITEFMENGS  113 (299)
T ss_dssp             CEEEEECCTTEE
T ss_pred             EEEEEEecCCCc
Confidence            999999999984

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=3.9e-14  Score=137.35  Aligned_cols=80  Identities=24%  Similarity=0.269  Sum_probs=68.9

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC----------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT----------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIY  498 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~----------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  498 (513)
                      +.|++.+.||+|+||+||+|+++.++..+|+|...          ...+.|.+|+.+|++++|||||++++++.+.+.+|
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            56999999999999999999998776666655211          12467999999999999999999999999999999


Q ss_pred             EEEccCCCCc
Q psy17476        499 IVTDTSSFRL  508 (513)
Q Consensus       499 lV~E~~~~Gl  508 (513)
                      ||||||+||-
T Consensus        90 iv~E~~~gg~   99 (293)
T d1jksa_          90 LILELVAGGE   99 (293)
T ss_dssp             EEEECCCSCB
T ss_pred             EEEEcCCCcc
Confidence            9999999863

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=3.7e-14  Score=135.27  Aligned_cols=84  Identities=21%  Similarity=0.437  Sum_probs=71.7

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecC-------CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG-------TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~-------~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      .|.+  ++|++.+.||+|+||+||+|+++.++..+|+|..       ....+.+.+|+++|++++|||||++++++.+++
T Consensus         2 ~~~l--~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~   79 (263)
T d2j4za1           2 QWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT   79 (263)
T ss_dssp             CCCG--GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             Ccch--hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECC
Confidence            3544  5799999999999999999999887777766632       223457899999999999999999999999999


Q ss_pred             eeEEEEccCCCCc
Q psy17476        496 PIYIVTDTSSFRL  508 (513)
Q Consensus       496 ~~~lV~E~~~~Gl  508 (513)
                      .+|||||||+||-
T Consensus        80 ~~~ivmEy~~~g~   92 (263)
T d2j4za1          80 RVYLILEYAPLGT   92 (263)
T ss_dssp             EEEEEEECCTTCB
T ss_pred             EEEEEEeecCCCc
Confidence            9999999999864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=3.8e-14  Score=136.02  Aligned_cols=85  Identities=27%  Similarity=0.511  Sum_probs=69.2

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeCce---eeEEeecCC-C-C---HHHHHHHHHHHhcCCCCceeceeeEEEeC
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRGSI---DVAMMKEGT-M-S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKH  494 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~---~v~~~k~~~-~-~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~  494 (513)
                      .|++++++|++.+.||+|+||.||+|.+....   ..+++|... . .   .+.|.+|+.+|++++|||||+++|+|. +
T Consensus         1 ~~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~   79 (273)
T d1mp8a_           1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E   79 (273)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-S
T ss_pred             CCCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence            48999999999999999999999999986432   233444322 1 2   246999999999999999999999996 4


Q ss_pred             CeeEEEEccCCCCc
Q psy17476        495 RPIYIVTDTSSFRL  508 (513)
Q Consensus       495 ~~~~lV~E~~~~Gl  508 (513)
                      +.+|||||||++|.
T Consensus        80 ~~~~iv~E~~~~g~   93 (273)
T d1mp8a_          80 NPVWIIMELCTLGE   93 (273)
T ss_dssp             SSCEEEEECCTTEE
T ss_pred             CeEEEEEEeccCCc
Confidence            67899999999875

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=2.7e-14  Score=136.81  Aligned_cols=79  Identities=23%  Similarity=0.328  Sum_probs=67.4

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC-----CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-----SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-----~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      ++|++.+.||+|+||+||+|+++.++..+|+|....     ..+.|.+|+++|++++|||||++++++.+++.+||||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            579999999999999999999987766666663221     234689999999999999999999999999999999999


Q ss_pred             CCCC
Q psy17476        504 SSFR  507 (513)
Q Consensus       504 ~~~G  507 (513)
                      |+||
T Consensus        85 ~~gg   88 (271)
T d1nvra_          85 CSGG   88 (271)
T ss_dssp             CTTE
T ss_pred             cCCC
Confidence            9985

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=4e-14  Score=137.14  Aligned_cols=81  Identities=15%  Similarity=0.160  Sum_probs=69.9

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeec----CCCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE----GTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~----~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      ..+|++.+.||+|+||+||+|..+.++..+|+|.    .....+.+.+|+.+|++++|||||++++++.+++.+||||||
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence            3578999999999999999999887766666653    223456799999999999999999999999999999999999


Q ss_pred             CCCCc
Q psy17476        504 SSFRL  508 (513)
Q Consensus       504 ~~~Gl  508 (513)
                      |+||.
T Consensus        99 ~~gg~  103 (293)
T d1yhwa1          99 LAGGS  103 (293)
T ss_dssp             CTTCB
T ss_pred             cCCCc
Confidence            99974

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=2.5e-14  Score=140.84  Aligned_cols=87  Identities=31%  Similarity=0.496  Sum_probs=71.6

Q ss_pred             CccccCCcCceeEeEecccccceEEEEEEeCce-----eeEEeecCC-----CCHHHHHHHHHHHhcC-CCCceeceeeE
Q psy17476        422 DKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI-----DVAMMKEGT-----MSEDDFIEEAKVMTRL-QHQNLVQLYGV  490 (513)
Q Consensus       422 ~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~-----~v~~~k~~~-----~~~~~f~~E~~il~~l-~HpNIV~l~g~  490 (513)
                      ..|++++++|++.+.||+|+||+||+|++....     ..+++|...     .....|.+|+.+|+++ +|||||+++|+
T Consensus        30 ~kwei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~  109 (325)
T d1rjba_          30 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGA  109 (325)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEE
Confidence            469999999999999999999999999987532     123444221     1234699999999998 89999999999


Q ss_pred             EEeCCeeEEEEccCCCCc
Q psy17476        491 CSKHRPIYIVTDTSSFRL  508 (513)
Q Consensus       491 ~~~~~~~~lV~E~~~~Gl  508 (513)
                      |.+.+.+|||||||+||-
T Consensus       110 ~~~~~~~~lv~Ey~~~g~  127 (325)
T d1rjba_         110 CTLSGPIYLIFEYCCYGD  127 (325)
T ss_dssp             ECSSSSCEEEEECCTTCB
T ss_pred             EeeCCeEEEEEEcCCCCc
Confidence            999999999999999863

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=7.3e-14  Score=136.41  Aligned_cols=88  Identities=30%  Similarity=0.528  Sum_probs=72.8

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCc------eeeEEeecCCC-CH---HHHHHHHHHHhcCCCCceeceeeE
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS------IDVAMMKEGTM-SE---DDFIEEAKVMTRLQHQNLVQLYGV  490 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~------~~v~~~k~~~~-~~---~~f~~E~~il~~l~HpNIV~l~g~  490 (513)
                      .+.|+++.++|++.+.||+|+||.||+|.++..      ..||+++.... ..   ..|.+|+++|++++|||||+++|+
T Consensus        12 ~~~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~   91 (308)
T d1p4oa_          12 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV   91 (308)
T ss_dssp             CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred             ccceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeE
Confidence            457999999999999999999999999998632      23344333221 22   358999999999999999999999


Q ss_pred             EEeCCeeEEEEccCCCCc
Q psy17476        491 CSKHRPIYIVTDTSSFRL  508 (513)
Q Consensus       491 ~~~~~~~~lV~E~~~~Gl  508 (513)
                      |..++..+||||||++|.
T Consensus        92 ~~~~~~~~lv~e~~~~g~  109 (308)
T d1p4oa_          92 VSQGQPTLVIMELMTRGD  109 (308)
T ss_dssp             ECSSSSCEEEEECCTTCB
T ss_pred             EecCCceeEEEeecCCCC
Confidence            999999999999999984

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=7.2e-14  Score=137.20  Aligned_cols=79  Identities=22%  Similarity=0.274  Sum_probs=69.0

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccCC
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTSS  505 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~~  505 (513)
                      ++|++.+.||+|+||+||+|.++.++..+|+|.....   ...+.+|+++|++++|||||++++++.+++.+|||||||+
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~   84 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS   84 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCC
Confidence            5799999999999999999999877776766643332   2358899999999999999999999999999999999999


Q ss_pred             CC
Q psy17476        506 FR  507 (513)
Q Consensus       506 ~G  507 (513)
                      ||
T Consensus        85 gg   86 (321)
T d1tkia_          85 GL   86 (321)
T ss_dssp             CC
T ss_pred             CC
Confidence            86

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=4.4e-14  Score=135.23  Aligned_cols=81  Identities=20%  Similarity=0.379  Sum_probs=66.6

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCC---CC---HHHHHHHHHHHhcCCCCceeceeeEEEe--CCeeEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT---MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSK--HRPIYI  499 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~---~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~--~~~~~l  499 (513)
                      .++|++.+.||+|+||+||+|+.+.++..+|+|...   .+   .+.|.+|+++|++++|||||++++++.+  +..+||
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            368999999999999999999998877777666422   22   2458899999999999999999999965  456899


Q ss_pred             EEccCCCCc
Q psy17476        500 VTDTSSFRL  508 (513)
Q Consensus       500 V~E~~~~Gl  508 (513)
                      |||||+||-
T Consensus        83 vmEy~~~g~   91 (269)
T d2java1          83 VMEYCEGGD   91 (269)
T ss_dssp             EEECCTTEE
T ss_pred             EEecCCCCc
Confidence            999999863

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=6.8e-14  Score=136.83  Aligned_cols=88  Identities=27%  Similarity=0.471  Sum_probs=73.1

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeC-----ceeeEEeecCCC--C---HHHHHHHHHHHhcC-CCCceeceee
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVAMMKEGTM--S---EDDFIEEAKVMTRL-QHQNLVQLYG  489 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-----~~~v~~~k~~~~--~---~~~f~~E~~il~~l-~HpNIV~l~g  489 (513)
                      ...|+++.++|++.+.||+|+||.||+|++..     ....+|+|....  .   ..+|.+|+.+|+++ +|||||+++|
T Consensus        15 ~~~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g   94 (311)
T d1t46a_          15 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG   94 (311)
T ss_dssp             CGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence            34799999999999999999999999999753     233455553222  1   24689999999999 7999999999


Q ss_pred             EEEeCCeeEEEEccCCCCc
Q psy17476        490 VCSKHRPIYIVTDTSSFRL  508 (513)
Q Consensus       490 ~~~~~~~~~lV~E~~~~Gl  508 (513)
                      +|.+.+.+|||||||++|.
T Consensus        95 ~~~~~~~~~lvmE~~~~g~  113 (311)
T d1t46a_          95 ACTIGGPTLVITEYCCYGD  113 (311)
T ss_dssp             EECSSSSCEEEEECCTTEE
T ss_pred             EEeeCCEEEEEEEcCCCCC
Confidence            9999999999999999974

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=7.1e-14  Score=135.07  Aligned_cols=80  Identities=21%  Similarity=0.232  Sum_probs=69.6

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecC-------CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEE
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG-------TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~-------~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      .++|++.+.||+|+||+||+|+++.++..+|+|..       ....+.+.+|+++|++++|||||++++++.+++.+|||
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv   86 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG   86 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEE
T ss_pred             CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEE
Confidence            46899999999999999999999877666666632       22345789999999999999999999999999999999


Q ss_pred             EccCCCC
Q psy17476        501 TDTSSFR  507 (513)
Q Consensus       501 ~E~~~~G  507 (513)
                      ||||+||
T Consensus        87 mEy~~gg   93 (288)
T d1uu3a_          87 LSYAKNG   93 (288)
T ss_dssp             ECCCTTE
T ss_pred             EEccCCC
Confidence            9999986

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=9e-14  Score=134.05  Aligned_cols=84  Identities=31%  Similarity=0.491  Sum_probs=69.0

Q ss_pred             ccCCcCceeEeEecccccceEEEEEEeCce----eeEEeecCC--CC---HHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        425 EIDPAELMLLEELGSGQFGVVRRGKWRGSI----DVAMMKEGT--MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       425 ~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~----~v~~~k~~~--~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      |+..+.|++.+.||+|+||.||+|.++.+.    ..+|+|...  ..   ..+|++|+++|++++|||||+++|+|.+.+
T Consensus         3 ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~   82 (283)
T d1mqba_           3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK   82 (283)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             cCCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCC
Confidence            567788999999999999999999987542    234444321  22   246999999999999999999999999999


Q ss_pred             eeEEEEccCCCCc
Q psy17476        496 PIYIVTDTSSFRL  508 (513)
Q Consensus       496 ~~~lV~E~~~~Gl  508 (513)
                      .+++|||||.+|+
T Consensus        83 ~~~~v~e~~~~~~   95 (283)
T d1mqba_          83 PMMIITEYMENGA   95 (283)
T ss_dssp             SEEEEEECCTTEE
T ss_pred             ceEEEEEecccCc
Confidence            9999999999986

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=9.5e-14  Score=133.97  Aligned_cols=85  Identities=27%  Similarity=0.484  Sum_probs=65.8

Q ss_pred             ccccCCcCceeEe-EecccccceEEEEEEeCc--eeeEEeecCC--CC---HHHHHHHHHHHhcCCCCceeceeeEEEeC
Q psy17476        423 KWEIDPAELMLLE-ELGSGQFGVVRRGKWRGS--IDVAMMKEGT--MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKH  494 (513)
Q Consensus       423 ~~~~~~~~~~~~~-~lG~G~fG~V~~g~~~~~--~~v~~~k~~~--~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~  494 (513)
                      .|.+.++++.+.+ +||+|+||.||+|.++..  ...+|+|...  ..   .+.|.+|+++|++++|||||+++|+|.. 
T Consensus         2 ~l~l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-   80 (285)
T d1u59a_           2 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-   80 (285)
T ss_dssp             CCBCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-
T ss_pred             ceeecccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-
Confidence            3567788899988 499999999999987643  2334444221  12   2469999999999999999999999975 


Q ss_pred             CeeEEEEccCCCCc
Q psy17476        495 RPIYIVTDTSSFRL  508 (513)
Q Consensus       495 ~~~~lV~E~~~~Gl  508 (513)
                      +.+|||||||+||-
T Consensus        81 ~~~~lvmE~~~~g~   94 (285)
T d1u59a_          81 EALMLVMEMAGGGP   94 (285)
T ss_dssp             SSEEEEEECCTTEE
T ss_pred             CeEEEEEEeCCCCc
Confidence            56899999999863

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.44  E-value=5.7e-14  Score=137.12  Aligned_cols=80  Identities=23%  Similarity=0.349  Sum_probs=68.5

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC---CCH----HHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT---MSE----DDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~---~~~----~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      +.|+..+.||+|+||.||+|++..++..+|+|...   ...    +.|.+|+++|++++|||||++++++.+++.+||||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            35899999999999999999998777766666322   111    35889999999999999999999999999999999


Q ss_pred             ccCCCCc
Q psy17476        502 DTSSFRL  508 (513)
Q Consensus       502 E~~~~Gl  508 (513)
                      |||++|.
T Consensus        95 E~~~~g~  101 (309)
T d1u5ra_          95 EYCLGSA  101 (309)
T ss_dssp             ECCSEEH
T ss_pred             EecCCCc
Confidence            9999986

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.43  E-value=7.2e-14  Score=136.29  Aligned_cols=80  Identities=19%  Similarity=0.250  Sum_probs=66.2

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-----CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-----SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-----~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      .+.|++.+.||+|+||+||+|+.+.++..+|+|....     ..+.+.+|+.+|++++|||||++++++.+++.+|||||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            3569999999999999999999987777666663221     23458899999999999999999999999999999999


Q ss_pred             cCCCC
Q psy17476        503 TSSFR  507 (513)
Q Consensus       503 ~~~~G  507 (513)
                      ||+||
T Consensus        88 ~~~gg   92 (307)
T d1a06a_          88 LVSGG   92 (307)
T ss_dssp             CCCSC
T ss_pred             ccCCC
Confidence            99975

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.42  E-value=1.5e-13  Score=136.39  Aligned_cols=79  Identities=25%  Similarity=0.291  Sum_probs=68.5

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC----HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccC
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS----EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS  504 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~----~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~  504 (513)
                      ++|++.+.||+|+||.||+|+.+.++..+|+|.....    .+.+.+|+.+|++++|||||++++++.+++.+|||||||
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            4799999999999999999999877666666643322    246889999999999999999999999999999999999


Q ss_pred             CCC
Q psy17476        505 SFR  507 (513)
Q Consensus       505 ~~G  507 (513)
                      +||
T Consensus       106 ~gg  108 (350)
T d1koaa2         106 SGG  108 (350)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            986

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.6e-13  Score=133.92  Aligned_cols=83  Identities=22%  Similarity=0.444  Sum_probs=67.6

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCcee---eEEeecCC----CCHHHHHHHHHHHhcC-CCCceeceeeEEEeCCee
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGSID---VAMMKEGT----MSEDDFIEEAKVMTRL-QHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~---v~~~k~~~----~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~  497 (513)
                      ++.++|++.+.||+|+||.||+|++++++.   |++++...    ...++|.+|+++|+++ +|||||+++|+|.+++.+
T Consensus         7 i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~   86 (309)
T d1fvra_           7 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL   86 (309)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred             cCHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCee
Confidence            566899999999999999999999976543   33333211    1234799999999998 799999999999999999


Q ss_pred             EEEEccCCCCc
Q psy17476        498 YIVTDTSSFRL  508 (513)
Q Consensus       498 ~lV~E~~~~Gl  508 (513)
                      |||||||+||-
T Consensus        87 ~iV~ey~~~g~   97 (309)
T d1fvra_          87 YLAIEYAPHGN   97 (309)
T ss_dssp             EEEECCCTTCB
T ss_pred             EEEEEecCCCc
Confidence            99999999864

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.41  E-value=1.7e-13  Score=136.13  Aligned_cols=79  Identities=27%  Similarity=0.304  Sum_probs=68.9

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC----HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEccC
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS----EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDTS  504 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~----~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~~  504 (513)
                      ++|++.+.||+|+||.||+|+.+.++..+|+|.....    .+.+.+|+++|++++|||||++++++.+++.+|||||||
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            5799999999999999999999877777766643222    346889999999999999999999999999999999999


Q ss_pred             CCC
Q psy17476        505 SFR  507 (513)
Q Consensus       505 ~~G  507 (513)
                      +||
T Consensus       109 ~gg  111 (352)
T d1koba_         109 SGG  111 (352)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=6.4e-14  Score=117.97  Aligned_cols=123  Identities=22%  Similarity=0.420  Sum_probs=91.0

Q ss_pred             CCcCCCCCCHHHHHHHHcCC-CCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQE-DKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~-~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      .+|+++.++|..|+++|... ..+|+||||.|.+ .+.|+||++.                                   
T Consensus         6 ~pWy~g~i~R~~Ae~~L~~~g~~~G~FLVR~S~~~~g~yvLSv~~-----------------------------------   50 (130)
T d2oq1a1           6 LPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVH-----------------------------------   50 (130)
T ss_dssp             CTTBCBSCCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEE-----------------------------------
T ss_pred             CCCccCCCCHHHHHHHHHhcCCCCceEEEEecCCCCccEEEEEee-----------------------------------
Confidence            35999999999999999754 4789999999865 7788888765                                   


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCCCC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDRP  412 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~~~  412 (513)
                                                .+.+.|+.|....++.|++.+...|.++.+||+||..+++++++.+.. ||+++
T Consensus        51 --------------------------~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~Lv~~Y~~~~~gL~~~L~~-P~~r~  103 (130)
T d2oq1a1          51 --------------------------DVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFYSRDPDGLPCNLRK-PCNRP  103 (130)
T ss_dssp             --------------------------TTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHHHCCTTSSSCCCS-BCCCC
T ss_pred             --------------------------CCceEEEEEEEcCCCceeccCCCCcCCHHHHHHHHhhCCCCCCccCCc-cCCCC
Confidence                                      356677777776777788877788999999999999998888887753 45444


Q ss_pred             CCCcccCCCCccccCCcCceeEeEecccccceEEE
Q psy17476        413 VPATAGLSHDKWEIDPAELMLLEELGSGQFGVVRR  447 (513)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~~lG~G~fG~V~~  447 (513)
                      .+...  ....|+.      +.+.+|+|.||.||+
T Consensus       104 ~~~~~--~~~~~~~------~~~~~~~~~~~~~w~  130 (130)
T d2oq1a1         104 SGLEP--QPGVFDC------LRDAMVRDYVRQTWK  130 (130)
T ss_dssp             TTCCC--BCCHHHH------HHHHHHHHHHHHHHC
T ss_pred             CCCCC--CcchHHH------HHHHHHHhhccCccC
Confidence            33221  1112221      235789999998864

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.40  E-value=2.3e-13  Score=133.16  Aligned_cols=80  Identities=19%  Similarity=0.288  Sum_probs=70.3

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      ++|++.+.||+|+||+||+|+++.++..+|+|...       ...+.+.+|+.+|++++|||||++++++.+.+.+|+||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            57999999999999999999998777777666422       23467899999999999999999999999999999999


Q ss_pred             ccCCCCc
Q psy17476        502 DTSSFRL  508 (513)
Q Consensus       502 E~~~~Gl  508 (513)
                      |||+||.
T Consensus        84 E~~~gg~   90 (316)
T d1fota_          84 DYIEGGE   90 (316)
T ss_dssp             CCCCSCB
T ss_pred             eecCCcc
Confidence            9999985

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=2.2e-13  Score=130.36  Aligned_cols=78  Identities=27%  Similarity=0.366  Sum_probs=62.8

Q ss_pred             ceeEeEecccccceEEEEEEeCceeeEEeec---CCCC---HHHHHHHHHHHhcCCCCceeceeeEEEe----CCeeEEE
Q psy17476        431 LMLLEELGSGQFGVVRRGKWRGSIDVAMMKE---GTMS---EDDFIEEAKVMTRLQHQNLVQLYGVCSK----HRPIYIV  500 (513)
Q Consensus       431 ~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~---~~~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~----~~~~~lV  500 (513)
                      +++.++||+|+||+||+|+++.+...+++|.   ....   .+.|.+|+++|++++|||||++++++.+    +..+|||
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            4677899999999999999987665554442   1122   2468999999999999999999999875    3568999


Q ss_pred             EccCCCCc
Q psy17476        501 TDTSSFRL  508 (513)
Q Consensus       501 ~E~~~~Gl  508 (513)
                      ||||++|-
T Consensus        91 mE~~~~g~   98 (270)
T d1t4ha_          91 TELMTSGT   98 (270)
T ss_dssp             EECCCSCB
T ss_pred             EeCCCCCc
Confidence            99999974

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=2.9e-13  Score=131.35  Aligned_cols=81  Identities=23%  Similarity=0.404  Sum_probs=70.1

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC------CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM------SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~------~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      ++|++.+.||+|+||+||+|++..++..+|+|....      ..+.+.+|+++|++++|||||++++++.++..+|||||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            589999999999999999999987777776664322      23578999999999999999999999999999999999


Q ss_pred             cCCCCcc
Q psy17476        503 TSSFRLG  509 (513)
Q Consensus       503 ~~~~Gl~  509 (513)
                      ||.+|+.
T Consensus        82 ~~~~~~~   88 (298)
T d1gz8a_          82 FLHQDLK   88 (298)
T ss_dssp             CCSEEHH
T ss_pred             ecCCchh
Confidence            9998863

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.38  E-value=4.3e-13  Score=130.40  Aligned_cols=85  Identities=25%  Similarity=0.492  Sum_probs=72.1

Q ss_pred             ccccCCcCceeEeEecccccceEEEEEEeC-----ceeeEEeecCCC--C---HHHHHHHHHHHhcCCCCceeceeeEEE
Q psy17476        423 KWEIDPAELMLLEELGSGQFGVVRRGKWRG-----SIDVAMMKEGTM--S---EDDFIEEAKVMTRLQHQNLVQLYGVCS  492 (513)
Q Consensus       423 ~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~-----~~~v~~~k~~~~--~---~~~f~~E~~il~~l~HpNIV~l~g~~~  492 (513)
                      .||+++++|++.+.||+|+||.||+|++++     ....+|+|....  .   .++|.+|+++|++++|||||+++++|.
T Consensus         7 ~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~   86 (301)
T d1lufa_           7 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA   86 (301)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             hccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeec
Confidence            588999999999999999999999999864     234455553322  1   246999999999999999999999999


Q ss_pred             eCCeeEEEEccCCCC
Q psy17476        493 KHRPIYIVTDTSSFR  507 (513)
Q Consensus       493 ~~~~~~lV~E~~~~G  507 (513)
                      .....++|||||++|
T Consensus        87 ~~~~~~~v~e~~~~g  101 (301)
T d1lufa_          87 VGKPMCLLFEYMAYG  101 (301)
T ss_dssp             SSSSCEEEEECCTTC
T ss_pred             cCCceEEEEEecCCC
Confidence            999999999999986

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=9e-13  Score=105.85  Aligned_cols=95  Identities=36%  Similarity=0.634  Sum_probs=76.8

Q ss_pred             CCcCCCCCCHHHHHHHHcCC-CCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQE-DKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~-~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ++|+++.++|..|+++|... ..+|+||||.|.+ .+.|+||++.                                   
T Consensus         2 epWy~g~isR~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~LSv~~-----------------------------------   46 (100)
T d1rjaa_           2 EPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRD-----------------------------------   46 (100)
T ss_dssp             CCCBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECT-----------------------------------
T ss_pred             CCCcCCCCCHHHHHHHHhccCCCCCeEEeecCCCCCCCEEEEEEc-----------------------------------
Confidence            46999999999999999754 4789999999965 6778888754                                   


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCCC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR  411 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~~  411 (513)
                                                .+.+.|+.|....++.|++.+...|.++.+||++|...+.++..++. .||++
T Consensus        47 --------------------------~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~~~~~~L~-~Pc~~   98 (100)
T d1rjaa_          47 --------------------------TQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSLSHGLRLA-APCRK   98 (100)
T ss_dssp             --------------------------TSSCEEEEEEECSSSCEEEETTEEESSHHHHHHHHHHCCTTSSSCCC-SBCCC
T ss_pred             --------------------------CCCceEEEEEECCCCCEEecCCCccCCHHHHHHHHhhCCCCCccCcC-eecCC
Confidence                                      35678888887777888888888899999999999988877776663 34543

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=4.2e-13  Score=132.39  Aligned_cols=82  Identities=20%  Similarity=0.163  Sum_probs=71.4

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEE
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYI  499 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  499 (513)
                      .-++|++.+.||+|+||+||+|+.+.++..+|+|...       ...+.+.+|+.+|++++|||||++++++.+.+.+||
T Consensus         3 ~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~i   82 (337)
T d1o6la_           3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred             chHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccccccc
Confidence            4468999999999999999999998877777766432       234568999999999999999999999999999999


Q ss_pred             EEccCCCCc
Q psy17476        500 VTDTSSFRL  508 (513)
Q Consensus       500 V~E~~~~Gl  508 (513)
                      |||||+||-
T Consensus        83 v~ey~~gg~   91 (337)
T d1o6la_          83 VMEYANGGE   91 (337)
T ss_dssp             EEECCTTCB
T ss_pred             ceeccCCCc
Confidence            999999974

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=4e-13  Score=130.48  Aligned_cols=88  Identities=27%  Similarity=0.507  Sum_probs=67.6

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCce-------eeEEeecCCC--C---HHHHHHHHHHHhcC-CCCceece
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSI-------DVAMMKEGTM--S---EDDFIEEAKVMTRL-QHQNLVQL  487 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~-------~v~~~k~~~~--~---~~~f~~E~~il~~l-~HpNIV~l  487 (513)
                      .++|+++.++|.+++.||+|+||.||+|+.....       ..+|+|....  .   ..++.+|+.+|.++ +|||||++
T Consensus         5 ~~~~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~   84 (299)
T d1fgka_           5 DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL   84 (299)
T ss_dssp             CTTTBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCcCcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEec
Confidence            3469999999999999999999999999876432       3455554322  2   24688899999888 89999999


Q ss_pred             eeEEEeCCeeEEEEccCCCCc
Q psy17476        488 YGVCSKHRPIYIVTDTSSFRL  508 (513)
Q Consensus       488 ~g~~~~~~~~~lV~E~~~~Gl  508 (513)
                      +|+|.++..+++|||||++|-
T Consensus        85 ~~~~~~~~~~~~v~e~~~~g~  105 (299)
T d1fgka_          85 LGACTQDGPLYVIVEYASKGN  105 (299)
T ss_dssp             EEEECSSSSCEEEECCCTTCB
T ss_pred             ccccccCCeEEEEEEccCCCc
Confidence            999999999999999999974

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.37  E-value=4.5e-13  Score=128.59  Aligned_cols=80  Identities=21%  Similarity=0.250  Sum_probs=67.7

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCC------C-------HHHHHHHHHHHhcCC-CCceeceeeEEEe
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM------S-------EDDFIEEAKVMTRLQ-HQNLVQLYGVCSK  493 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~------~-------~~~f~~E~~il~~l~-HpNIV~l~g~~~~  493 (513)
                      .++|++.+.||+|+||+||+|+...++..+|+|....      .       .+.+.+|+.+|++++ |||||++++++.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            3689999999999999999999877766666663211      1       125889999999997 9999999999999


Q ss_pred             CCeeEEEEccCCCC
Q psy17476        494 HRPIYIVTDTSSFR  507 (513)
Q Consensus       494 ~~~~~lV~E~~~~G  507 (513)
                      ++.+|||||||+||
T Consensus        82 ~~~~~ivmE~~~~g   95 (277)
T d1phka_          82 NTFFFLVFDLMKKG   95 (277)
T ss_dssp             SSEEEEEEECCTTC
T ss_pred             CcceEEEEEcCCCc
Confidence            99999999999986

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=5.6e-13  Score=127.97  Aligned_cols=81  Identities=28%  Similarity=0.534  Sum_probs=61.0

Q ss_pred             CCcCceeE-eEecccccceEEEEEEeCc--eeeEEeecCC---CC---HHHHHHHHHHHhcCCCCceeceeeEEEeCCee
Q psy17476        427 DPAELMLL-EELGSGQFGVVRRGKWRGS--IDVAMMKEGT---MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       427 ~~~~~~~~-~~lG~G~fG~V~~g~~~~~--~~v~~~k~~~---~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      +...+.+. ++||+|+||.||+|.++..  ...+|+|...   .+   .+.|.+|+++|++++|||||+++|+|.. +..
T Consensus         4 d~~~~~le~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~   82 (277)
T d1xbba_           4 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESW   82 (277)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSE
T ss_pred             chhhCeecCCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCE
Confidence            33445554 4799999999999988643  3444554321   11   2469999999999999999999999975 567


Q ss_pred             EEEEccCCCCc
Q psy17476        498 YIVTDTSSFRL  508 (513)
Q Consensus       498 ~lV~E~~~~Gl  508 (513)
                      |||||||++|-
T Consensus        83 ~lvmE~~~~g~   93 (277)
T d1xbba_          83 MLVMEMAELGP   93 (277)
T ss_dssp             EEEEECCTTEE
T ss_pred             EEEEEcCCCCc
Confidence            99999999873

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.3e-12  Score=127.89  Aligned_cols=80  Identities=16%  Similarity=0.264  Sum_probs=67.8

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHh-cCCCCceeceeeEEEeCCeeEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMT-RLQHQNLVQLYGVCSKHRPIYIV  500 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~-~l~HpNIV~l~g~~~~~~~~~lV  500 (513)
                      ++|++.+.||+|+||+||+|+++.++..+|+|...       ...+.+..|+.+|. .++|||||++++++.+++.+|||
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            57999999999999999999998877777666432       23456788888765 68999999999999999999999


Q ss_pred             EccCCCCc
Q psy17476        501 TDTSSFRL  508 (513)
Q Consensus       501 ~E~~~~Gl  508 (513)
                      ||||+||-
T Consensus        82 mEy~~~g~   89 (320)
T d1xjda_          82 MEYLNGGD   89 (320)
T ss_dssp             EECCTTCB
T ss_pred             EeecCCCc
Confidence            99999974

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=3e-12  Score=107.22  Aligned_cols=95  Identities=27%  Similarity=0.528  Sum_probs=77.8

Q ss_pred             CCcCCCCCCHHHHHHHHcCC-CCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQE-DKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~-~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      .+|+++.++|..|+++|... ..+|+||||+|.+ .+.|+||++.                                   
T Consensus         5 ~PWyhg~isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y~LSv~~-----------------------------------   49 (129)
T d1a81a1           5 LPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAH-----------------------------------   49 (129)
T ss_dssp             STTBCSSCCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEE-----------------------------------
T ss_pred             CCcccCCCCHHHHHHHHHhcCCCCccEEEEccCCCCcceEEEeee-----------------------------------
Confidence            45999999999999998754 4789999999865 6888888765                                   


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCCC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR  411 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~~  411 (513)
                                                .+.+.|+.|....+|.|++.+...|.++.+||+||+..++++.+.+.. |+.+
T Consensus        50 --------------------------~~~v~H~~I~~~~~g~~~i~~~~~F~sl~eLV~~Y~~~~~gl~~~L~~-P~~~  101 (129)
T d1a81a1          50 --------------------------GRKAHHYTIERELNGTYAIAGGRTHASPADLCHYHSQESDGLVCLLKK-PFNR  101 (129)
T ss_dssp             --------------------------TTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHTTCCTTSSSCCCE-ECCC
T ss_pred             --------------------------cccceEEEEEEcCCCCeeecCCcccCCHHHHHHHHhhCCCCCcccCCC-CCCC
Confidence                                      356778888777777788887888999999999999999988887754 4433

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.32  E-value=1.2e-12  Score=125.52  Aligned_cols=80  Identities=21%  Similarity=0.113  Sum_probs=66.3

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC----C---HHHHHHHHHHHhcCCCCceeceeeEEEeCC----ee
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM----S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR----PI  497 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~----~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~~----~~  497 (513)
                      ++|++.+.||+|+||.||+|+...++..+|+|....    +   .+.|.+|+++|++++|||||++++++...+    .+
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            569999999999999999999987766666664221    2   235899999999999999999999998754    38


Q ss_pred             EEEEccCCCCc
Q psy17476        498 YIVTDTSSFRL  508 (513)
Q Consensus       498 ~lV~E~~~~Gl  508 (513)
                      |||||||+||-
T Consensus        87 ~lvmE~~~g~~   97 (277)
T d1o6ya_          87 YIVMEYVDGVT   97 (277)
T ss_dssp             EEEEECCCEEE
T ss_pred             EEEEECCCCCE
Confidence            99999999863

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=7.1e-13  Score=128.64  Aligned_cols=76  Identities=24%  Similarity=0.376  Sum_probs=64.3

Q ss_pred             eEeEecccccceEEEEEEeCceeeEEeecCCCC---------HHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        433 LLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS---------EDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       433 ~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~---------~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      .++.||+|+||+||+|+.+.++..+|+|.....         .+.+.+|+.+|++++|||||++++++..++.+||||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            357899999999999999887777766643221         13588999999999999999999999999999999999


Q ss_pred             CCCCc
Q psy17476        504 SSFRL  508 (513)
Q Consensus       504 ~~~Gl  508 (513)
                      |.+|+
T Consensus        82 ~~~~~   86 (299)
T d1ua2a_          82 METDL   86 (299)
T ss_dssp             CSEEH
T ss_pred             hcchH
Confidence            99986

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=9.9e-13  Score=125.92  Aligned_cols=82  Identities=41%  Similarity=0.694  Sum_probs=60.3

Q ss_pred             cCCcCceeEeEecccccceEEEEEEeCc---eeeEEeecCCC-----C--HHHHHHHHHHHhcCCCCceeceeeEEEeCC
Q psy17476        426 IDPAELMLLEELGSGQFGVVRRGKWRGS---IDVAMMKEGTM-----S--EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR  495 (513)
Q Consensus       426 ~~~~~~~~~~~lG~G~fG~V~~g~~~~~---~~v~~~k~~~~-----~--~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  495 (513)
                      |..++|++.+.||+|+||.||+|++...   ...+|+|....     .  .++|.+|+++|++++|||||+++|+|.+ +
T Consensus         5 i~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~   83 (273)
T d1u46a_           5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-P   83 (273)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred             EchHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-c
Confidence            5567899999999999999999987643   12234443221     1  2479999999999999999999999975 5


Q ss_pred             eeEEEEccCCCCc
Q psy17476        496 PIYIVTDTSSFRL  508 (513)
Q Consensus       496 ~~~lV~E~~~~Gl  508 (513)
                      .+++|||||++|.
T Consensus        84 ~~~lv~e~~~~~~   96 (273)
T d1u46a_          84 PMKMVTELAPLGS   96 (273)
T ss_dssp             SCEEEEECCTTCB
T ss_pred             chheeeeeecCcc
Confidence            6799999999865

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=6.5e-12  Score=104.62  Aligned_cols=93  Identities=30%  Similarity=0.558  Sum_probs=74.8

Q ss_pred             CcCCCCCCHHHHHHHHcCC-CCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        256 AWYVGDMSRQRAESILKQE-DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       256 ~w~~~~~~R~~aeeLL~~~-~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      +|+++.++|..|+++|... .++|+||||.+.+.+.|+||++.                                     
T Consensus        30 pWyhg~isR~eAe~lL~~~~~~dGtFLVR~S~~~g~yvLSv~~-------------------------------------   72 (124)
T d2oq1a2          30 PWYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIY-------------------------------------   72 (124)
T ss_dssp             TTBCSSCCHHHHHHHHHSSCCCTTEEEEEECSSTTEEEEEEEE-------------------------------------
T ss_pred             CCccCCCCHHHHHHHHhhcCCCCceEEeEecCCCCCEEEEeec-------------------------------------
Confidence            4999999999999998753 47899999998777888888765                                     


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCC
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCD  410 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~  410 (513)
                                              .+.++|+.|..+.++.|++.....|.++.+||+||....+++.+.+. .||+
T Consensus        73 ------------------------~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~~gL~~~L~-~PcP  123 (124)
T d2oq1a2          73 ------------------------GKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKADGLIYCLK-EACP  123 (124)
T ss_dssp             ------------------------TTEEEEEEEEECTTSCEESTTSCCBSSHHHHHHHHHHCCTTSSSCCC-SBCC
T ss_pred             ------------------------CCceEEEEEEECCCCCEEeCCCcccCCHHHHHHHHhhCCCCCcccCC-CcCc
Confidence                                    34567777777666677777777899999999999999888887774 3443

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=5.8e-12  Score=101.76  Aligned_cols=99  Identities=32%  Similarity=0.613  Sum_probs=77.3

Q ss_pred             CCcCCCCCCHHHHHHHHcC-CCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQ-EDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~-~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      +.|+++.++|.+|+++|.. ..++|+||||.|.+ ++.|+++++....                                
T Consensus         1 e~Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~--------------------------------   48 (103)
T d1qcfa2           1 EEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDP--------------------------------   48 (103)
T ss_dssp             STTEETTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTSEEEEEEEEET--------------------------------
T ss_pred             CCccCCCCCHHHHHHHHhhcCCCCCcEEEEccCCCCCCeEEEEEecCC--------------------------------
Confidence            3599999999999998754 35789999999975 7788888764110                                


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCD  410 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~  410 (513)
                                              ..+..|+|+.|....++.|++.+...|.++.+||+||...++++.+++. .||+
T Consensus        49 ------------------------~~~~~v~H~~i~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~~gL~~~L~-~PC~  101 (103)
T d1qcfa2          49 ------------------------RQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLS-VPCM  101 (103)
T ss_dssp             ------------------------TTEEEEEEEEEEECTTSCEESSSSSCBSSHHHHHHHHTSSCTTSSSCCC-SBCC
T ss_pred             ------------------------CcCceEEEEEEEEcCCCceeecCCcccCCHHHHHHHHhhCCCCCCccCC-ccCC
Confidence                                    0124577888888777888888888899999999999999888888774 4454

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=5.5e-12  Score=122.95  Aligned_cols=78  Identities=22%  Similarity=0.377  Sum_probs=60.2

Q ss_pred             ceeEeEecccccceEEEEEEeCce----eeEEeecCC-CC---HHHHHHHHHHHhcCCCCceeceeeEEEeC-CeeEEEE
Q psy17476        431 LMLLEELGSGQFGVVRRGKWRGSI----DVAMMKEGT-MS---EDDFIEEAKVMTRLQHQNLVQLYGVCSKH-RPIYIVT  501 (513)
Q Consensus       431 ~~~~~~lG~G~fG~V~~g~~~~~~----~v~~~k~~~-~~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~-~~~~lV~  501 (513)
                      +.+.++||+|+||+||+|++....    .||+++... ..   .++|.+|+++|++++|||||+++|+|.+. ...++||
T Consensus        29 ~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~  108 (311)
T d1r0pa_          29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  108 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEE
T ss_pred             eccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEE
Confidence            345678999999999999986532    233333322 12   24699999999999999999999998764 5789999


Q ss_pred             ccCCCCc
Q psy17476        502 DTSSFRL  508 (513)
Q Consensus       502 E~~~~Gl  508 (513)
                      |||++|.
T Consensus       109 E~~~~g~  115 (311)
T d1r0pa_         109 PYMKHGD  115 (311)
T ss_dssp             ECCTTCB
T ss_pred             EEeecCc
Confidence            9999976

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.26  E-value=4.3e-12  Score=125.80  Aligned_cols=80  Identities=20%  Similarity=0.215  Sum_probs=70.1

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC-------CCHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEE
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT-------MSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVT  501 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~-------~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  501 (513)
                      ++|++.+.||+|+||.||+|+++.++..+|+|...       ...+.+.+|+++|++++|||||++++++.....+++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            58999999999999999999998777777666322       23457899999999999999999999999999999999


Q ss_pred             ccCCCCc
Q psy17476        502 DTSSFRL  508 (513)
Q Consensus       502 E~~~~Gl  508 (513)
                      |||.||.
T Consensus       121 e~~~~g~  127 (350)
T d1rdqe_         121 EYVAGGE  127 (350)
T ss_dssp             ECCTTCB
T ss_pred             ccccccc
Confidence            9999985

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=7.3e-12  Score=122.43  Aligned_cols=80  Identities=26%  Similarity=0.530  Sum_probs=61.2

Q ss_pred             CCcCceeEeEecccccceEEEEEEeCcee-----eEEeecC----CCCHHHHHHHHHHHhcCCCCceeceeeEEEeCCee
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRGSID-----VAMMKEG----TMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~~~~-----v~~~k~~----~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      ..++|++.+.||+|+||+||+|.+..++.     |++++..    ....++|.+|+.+|++++|||||+++|+|.+++ .
T Consensus         7 k~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-~   85 (317)
T d1xkka_           7 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V   85 (317)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSS-E
T ss_pred             CHHHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-e
Confidence            44689999999999999999999875432     3333321    123467999999999999999999999998754 5


Q ss_pred             EEEEccCCCC
Q psy17476        498 YIVTDTSSFR  507 (513)
Q Consensus       498 ~lV~E~~~~G  507 (513)
                      +++||||.+|
T Consensus        86 ~~v~e~~~~~   95 (317)
T d1xkka_          86 QLITQLMPFG   95 (317)
T ss_dssp             EEEEECCTTC
T ss_pred             eEEEEeccCC
Confidence            7777777765

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.25  E-value=3.8e-12  Score=122.51  Aligned_cols=80  Identities=25%  Similarity=0.374  Sum_probs=67.3

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC-----CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEcc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-----SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTDT  503 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-----~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E~  503 (513)
                      ++|++.+.||+|+||.||+|+++.+..+|+++....     ..+.|.+|+.+|++++|||||++++++..++..+++|||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            578999999999999999999875544444432211     135799999999999999999999999999999999999


Q ss_pred             CCCCc
Q psy17476        504 SSFRL  508 (513)
Q Consensus       504 ~~~Gl  508 (513)
                      +.+|+
T Consensus        82 ~~~~~   86 (286)
T d1ob3a_          82 LDQDL   86 (286)
T ss_dssp             CSEEH
T ss_pred             ehhhh
Confidence            99886

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.4e-12  Score=129.55  Aligned_cols=79  Identities=23%  Similarity=0.239  Sum_probs=66.5

Q ss_pred             CceeEeEecccccceEEEEEEeCceeeEEeecCCCCHHHHHHHHHHHhcCCCCceeceeeEEEeC------CeeEEEEcc
Q psy17476        430 ELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQHQNLVQLYGVCSKH------RPIYIVTDT  503 (513)
Q Consensus       430 ~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~------~~~~lV~E~  503 (513)
                      +|+..++||+|+||+||+|+++.++..+|+|........+.+|+++|++++|||||+++++|...      .++||||||
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey  100 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY  100 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEEC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEec
Confidence            68889999999999999999988777777775444444456899999999999999999999643      358999999


Q ss_pred             CCCCc
Q psy17476        504 SSFRL  508 (513)
Q Consensus       504 ~~~Gl  508 (513)
                      |++|+
T Consensus       101 ~~~~~  105 (350)
T d1q5ka_         101 VPETV  105 (350)
T ss_dssp             CSEEH
T ss_pred             cCCcc
Confidence            99986

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.1e-11  Score=100.50  Aligned_cols=99  Identities=30%  Similarity=0.587  Sum_probs=76.9

Q ss_pred             CCcCCCCCCHHHHHHHHcCC-CCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQE-DKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~-~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ++|+++.++|.+|+++|... .++|+||||.|.+ ++.|+++++.....                               
T Consensus         4 ~pWy~g~isR~eAe~~L~~~~~~~GtFLVR~S~~~~g~~~lsv~~~~~~-------------------------------   52 (105)
T d1lkka_           4 EPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQN-------------------------------   52 (105)
T ss_dssp             CTTBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEETT-------------------------------
T ss_pred             CCccCCCCCHHHHHHHHHhcCCCCCcEEEEccCCCCCCEEEEEEEcccC-------------------------------
Confidence            46999999999999988543 5789999999865 77888887642100                               


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCD  410 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~  410 (513)
                                               .+..+.|+.|....++.|++.....|.++.+||+||+..++++..++. .||+
T Consensus        53 -------------------------~~~~v~h~~i~~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~gL~~~L~-~Pcp  104 (105)
T d1lkka_          53 -------------------------QGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLS-RPCQ  104 (105)
T ss_dssp             -------------------------TEEEEEEEEEEECTTSCEESSTTSCBSSHHHHHHHHHHCCTTSSSCCC-SBCC
T ss_pred             -------------------------CCccEEEEEEEEcCCCCEEecCCcccCCHHHHHHHHhhCCCCCCccCC-CcCC
Confidence                                     012367888877778888888888899999999999999888887774 3454

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.25  E-value=5.5e-12  Score=125.64  Aligned_cols=81  Identities=14%  Similarity=0.051  Sum_probs=66.2

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCC-------CHHHHHHH---HHHHhcCCCCceeceeeEEEeCCee
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM-------SEDDFIEE---AKVMTRLQHQNLVQLYGVCSKHRPI  497 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~-------~~~~f~~E---~~il~~l~HpNIV~l~g~~~~~~~~  497 (513)
                      -++|++.+.||+|+||.||+|+++.++..+|+|....       ....+.+|   +++|+.++|||||++++++.+.+.+
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            4689999999999999999999988777777764321       12234444   6778888999999999999999999


Q ss_pred             EEEEccCCCCc
Q psy17476        498 YIVTDTSSFRL  508 (513)
Q Consensus       498 ~lV~E~~~~Gl  508 (513)
                      |||||||+||-
T Consensus        83 ~ivmE~~~gg~   93 (364)
T d1omwa3          83 SFILDLMNGGD   93 (364)
T ss_dssp             EEEECCCCSCB
T ss_pred             EEEEEecCCCc
Confidence            99999999863

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.7e-12  Score=127.09  Aligned_cols=88  Identities=23%  Similarity=0.346  Sum_probs=65.2

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCC---C---HHHHHHHHHHHhcCCCCceeceeeEEEeC
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM---S---EDDFIEEAKVMTRLQHQNLVQLYGVCSKH  494 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~---~---~~~f~~E~~il~~l~HpNIV~l~g~~~~~  494 (513)
                      ...|++ ++.|++.+.||+|+||+||+|..+.++..+|+|....   .   .+.+.+|+++|++++|||||+++++|...
T Consensus        11 ~~~~~~-~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~   89 (346)
T d1cm8a_          11 KTAWEV-RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPD   89 (346)
T ss_dssp             SSEECC-BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSC
T ss_pred             Cceeec-CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccC
Confidence            345776 4789999999999999999999987777666664332   2   24688999999999999999999999765


Q ss_pred             C------eeEEEEccCCCCcc
Q psy17476        495 R------PIYIVTDTSSFRLG  509 (513)
Q Consensus       495 ~------~~~lV~E~~~~Gl~  509 (513)
                      +      .+|||||||.+.|.
T Consensus        90 ~~~~~~~~~~lv~e~~~~~l~  110 (346)
T d1cm8a_          90 ETLDDFTDFYLVMPFMGTDLG  110 (346)
T ss_dssp             SSTTTCCCCEEEEECCSEEHH
T ss_pred             ccccccceEEEEEecccccHH
Confidence            4      57999999965543

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=1.4e-11  Score=101.39  Aligned_cols=99  Identities=28%  Similarity=0.560  Sum_probs=78.6

Q ss_pred             CCcCCCCCCHHHHHHHHcC-CCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQ-EDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~-~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ++|+++.++|.+|+++|.. ..++|+||||.|++ ++.|+++++....                                
T Consensus        12 e~Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~--------------------------------   59 (114)
T d1blja_          12 EKWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITT--------------------------------   59 (114)
T ss_dssp             SSSBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCCT--------------------------------
T ss_pred             CCCcCCCCCHHHHHHHHHhcCCCCceEEEeccCCCCCCeEEEEEeecc--------------------------------
Confidence            4699999999999997754 46799999999965 7889888764211                                


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCCC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCDR  411 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~~  411 (513)
                                               ..+.+.|+.|....++.|++.+...|.++.+||+||+.+++++..++. .||+.
T Consensus        60 -------------------------~~~~v~H~~i~~~~~g~~~l~~~~~F~sl~eLV~~y~~~~~gL~~~L~-~PC~~  112 (114)
T d1blja_          60 -------------------------QGEVVKHYKIRSLDNGGYYISPRITFPTLQALVQHYSKKGDGLCQKLT-LPCVN  112 (114)
T ss_dssp             -------------------------TTCBCCCEEEEEETTTEEEEETTEEESSHHHHHHHHHHCCSSSSSCCC-CCSCC
T ss_pred             -------------------------CCCEEEEEEEEEcCCCCEEecCCceECCHHHHHHHHhhCCCCCCccCC-ccCcC
Confidence                                     124578888887777888888888899999999999999988888775 44543

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.23  E-value=1.5e-11  Score=99.17  Aligned_cols=90  Identities=21%  Similarity=0.396  Sum_probs=68.2

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|..|+++|....++|+||||+|++ .+.|+||++.   +                                
T Consensus         3 ~PWy~g~isR~~AE~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~---~--------------------------------   47 (103)
T d1i3za_           3 LPYYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSF---K--------------------------------   47 (103)
T ss_dssp             CTTEESSCCHHHHHHHHHTTCSTTEEEEEECSSSTTCEEEEEEC---S--------------------------------
T ss_pred             CCcccCCCCHHHHHHHHHhCCCCCeEEEEecCCCCCCEEEEEEe---C--------------------------------
Confidence            459999999999999997667899999999965 7889999875   3                                


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEec-----CcccCChhhhhhcccccCCCCccccC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSE-----KHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~-----~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                                +.+.|+.|.+..++.|++..     ...|.++.+||+||...+.++.+.+.
T Consensus        48 --------------------------~~v~H~~I~~~~~g~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~gl~~~L~   98 (103)
T d1i3za_          48 --------------------------KLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQELVSKYGKPGQGLVVHLS   98 (103)
T ss_dssp             --------------------------SSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHHHHHTTSSSSSSSSCCC
T ss_pred             --------------------------CeEEEEEeEEcCCCcEEEeccCCcCccccCCHHHHHHHhhhCCCCCeEeCC
Confidence                                      34455555544455555432     34699999999999988877766553

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1.2e-11  Score=103.10  Aligned_cols=89  Identities=26%  Similarity=0.502  Sum_probs=72.3

Q ss_pred             CcCCCCCCHHHHHHHHcC-CCCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        256 AWYVGDMSRQRAESILKQ-EDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       256 ~w~~~~~~R~~aeeLL~~-~~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      +|+++.++|..|+++|.. ..++|+||||.+++.+.|+||++.                                     
T Consensus        30 pWyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~~yvLSv~~-------------------------------------   72 (125)
T d1a81a2          30 PWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLH-------------------------------------   72 (125)
T ss_dssp             TTEEEECCHHHHHHHHHSSCCCTTCEEEEECSSSSCEEEEEEE-------------------------------------
T ss_pred             CccCCCCCHHHHHHHHHhcCCCCceEEEEecCCCCCEEEEeec-------------------------------------
Confidence            499999999999998764 346899999988777788888754                                     


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccC
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                              .+.+.|+.|....++.|++.....|.++.+||+||...++++.+++.
T Consensus        73 ------------------------~~~v~H~~I~~~~~g~~~~~~~~~F~sL~~LI~~y~~~~~gL~~~L~  119 (125)
T d1a81a2          73 ------------------------EGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKADGLLRVLT  119 (125)
T ss_dssp             ------------------------TTEEEEEEEEECTTSCEECTTSCCBSCHHHHHHHHTTCCTTSSSCCC
T ss_pred             ------------------------cccceeEeeeEcCCCcEeccCCcccCCHHHHHHHHhhCCCCCCccCC
Confidence                                    34567777777667777777777899999999999998888877764

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=1.1e-11  Score=100.57  Aligned_cols=99  Identities=33%  Similarity=0.659  Sum_probs=77.2

Q ss_pred             CCcCCCCCCHHHHHHHHcC-CCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQ-EDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~-~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ++|+++.++|.+|+++|.. ..++|+||||+|.+ .+.|+||++.....                               
T Consensus         5 ~~Wy~g~i~R~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~-------------------------------   53 (106)
T d1o48a_           5 EEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNA-------------------------------   53 (106)
T ss_dssp             STTEEESCCHHHHHHHHCCTTCCTTCEEEEECSSSTTCEEEEEEEEETT-------------------------------
T ss_pred             CCccCCCCCHHHHHHHHHhcCCCCCcEEEEcccCCCCCEEEEEEecccC-------------------------------
Confidence            4699999999999998865 35799999999965 78899887652110                               


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCcCCCC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKTSPCD  410 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~~~~~  410 (513)
                                               ....|.|+.+....++.|++.+...|.++.+||+||+.+++++.+++. .|||
T Consensus        54 -------------------------~~~~i~h~~i~~~~~g~~~~~~~~~F~sl~eLV~~y~~~~~gL~~~L~-~pcP  105 (106)
T d1o48a_          54 -------------------------KGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLT-TVCP  105 (106)
T ss_dssp             -------------------------TEEEEEEEEEEECTTSCEESSTTSEESSHHHHHHHHTTCCTTSSSCCC-SBCC
T ss_pred             -------------------------cccceEEEEEEEecCCCEEEcCCeeECCHHHHHHHHhhCCCCCCccCC-CcCC
Confidence                                     012466788877778888888888899999999999999888887774 3443

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=1.4e-11  Score=99.09  Aligned_cols=89  Identities=33%  Similarity=0.587  Sum_probs=72.1

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|.+|+.+|.. ..+|+||||.|.+ ++.|+||++.                                    
T Consensus         5 ~~Wy~g~isR~eAe~lL~~-~~~G~FLVR~S~~~~~~~~LSv~~------------------------------------   47 (101)
T d1opka2           5 HSWYHGPVSRNAAEYLLSS-GINGSFLVRESESSPGQRSISLRY------------------------------------   47 (101)
T ss_dssp             STTEEEECCHHHHHHHGGG-CCTTEEEEEECSSSTTCEEEEEEE------------------------------------
T ss_pred             CcccCCCCCHHHHHHHhcC-CCCCeEEEEecCCCCCCEEEEEEc------------------------------------
Confidence            3599999999999999986 5789999999865 7788888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                               .+.+.|+.|.+..+|.|++.....|.++.+||++|...+.++...+.
T Consensus        48 -------------------------~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI~~y~~~~~~l~~~L~   94 (101)
T d1opka2          48 -------------------------EGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLH   94 (101)
T ss_dssp             -------------------------TTEEEEEECEECTTSCEESSTTSCBSSHHHHHHHHTTCCTTSSSCCC
T ss_pred             -------------------------CcceEEEEeEECCCCCEEeCCCcccCCHHHHHHHHhhCCCCCceECC
Confidence                                     24566777766666677777777899999999999998887776653

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=1.2e-11  Score=119.98  Aligned_cols=79  Identities=30%  Similarity=0.577  Sum_probs=60.3

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCCHHHHHHHHHHH--hcCCCCceeceeeEEEeCC----eeEEEEc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVM--TRLQHQNLVQLYGVCSKHR----PIYIVTD  502 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~~~f~~E~~il--~~l~HpNIV~l~g~~~~~~----~~~lV~E  502 (513)
                      .+|.+.+.||+|+||.||+|++.+ ..||+++......+++.+|.+++  ++++|||||+++|+|.+.+    .+|||||
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~g-~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~E   81 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWRG-EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETT-EEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECC-EEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEe
Confidence            468899999999999999999754 34554443333345566665554  5789999999999998754    6899999


Q ss_pred             cCCCCc
Q psy17476        503 TSSFRL  508 (513)
Q Consensus       503 ~~~~Gl  508 (513)
                      ||++|-
T Consensus        82 y~~~g~   87 (303)
T d1vjya_          82 YHEHGS   87 (303)
T ss_dssp             CCTTCB
T ss_pred             cccCCC
Confidence            999864

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=1.3e-11  Score=118.83  Aligned_cols=80  Identities=23%  Similarity=0.370  Sum_probs=69.1

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecC---CC---CHHHHHHHHHHHhcCCCCceeceeeEEEeCCeeEEEEc
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG---TM---SEDDFIEEAKVMTRLQHQNLVQLYGVCSKHRPIYIVTD  502 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~---~~---~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  502 (513)
                      ++|++.+.||+|+||+||+|++..++..+|+|..   ..   ..+.+.+|+.+|++++|||||++++++......++|||
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            4799999999999999999999877776666632   11   13578999999999999999999999999999999999


Q ss_pred             cCCCCc
Q psy17476        503 TSSFRL  508 (513)
Q Consensus       503 ~~~~Gl  508 (513)
                      ++.++.
T Consensus        82 ~~~~~~   87 (292)
T d1unla_          82 FCDQDL   87 (292)
T ss_dssp             CCSEEH
T ss_pred             eccccc
Confidence            999876

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=8.5e-12  Score=120.84  Aligned_cols=88  Identities=27%  Similarity=0.479  Sum_probs=69.1

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCc-----eeeEEeecCCCC-----HHHHHHHHHHHhcC-CCCceeceee
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGS-----IDVAMMKEGTMS-----EDDFIEEAKVMTRL-QHQNLVQLYG  489 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~-----~~v~~~k~~~~~-----~~~f~~E~~il~~l-~HpNIV~l~g  489 (513)
                      .+.|++++++|++.+.||+|+||.||+|.+...     .+.+|+|.....     .+.|.+|+.++.++ +|+|||++++
T Consensus         5 ~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~   84 (299)
T d1ywna1           5 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG   84 (299)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeee
Confidence            457999999999999999999999999998643     344555543221     24688888888776 7899999999


Q ss_pred             EEEeC-CeeEEEEccCCCCc
Q psy17476        490 VCSKH-RPIYIVTDTSSFRL  508 (513)
Q Consensus       490 ~~~~~-~~~~lV~E~~~~Gl  508 (513)
                      ++... ..+++|||||++|-
T Consensus        85 ~~~~~~~~~~iv~E~~~~g~  104 (299)
T d1ywna1          85 ACTKPGGPLMVIVEFCKFGN  104 (299)
T ss_dssp             EECSTTSCCEEEEECCTTCB
T ss_pred             eeccCCCeEEEEEEecCCCc
Confidence            98764 46899999999874

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=1.3e-11  Score=98.25  Aligned_cols=88  Identities=25%  Similarity=0.472  Sum_probs=71.0

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|.+|+++|.. ..+|+||||.|.+ .+.|+||++.                                    
T Consensus         4 ~PWy~g~isR~eAe~~L~~-~~~G~FLVR~S~~~~g~~vLSv~~------------------------------------   46 (97)
T d1jwoa_           4 MPWFHGKISGQEAVQQLQP-PEDGLFLVRESARHPGDYVLCVSF------------------------------------   46 (97)
T ss_dssp             CTTEEESCCHHHHHHHTCS-CCTTCEEEEECSSSTTCEEEEEEE------------------------------------
T ss_pred             CCccCCCCCHHHHHHHhcC-CCCCeEEEEecCCCCccEEEEEEe------------------------------------
Confidence            4699999999999999975 5789999999865 6788888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                               .+.+.|+.|... ++.|++.+...|+++.+||+||....+++.+++.
T Consensus        47 -------------------------~~~v~H~~I~~~-~~~~~~~~~~~F~sl~~LI~~y~~~~~~L~~~L~   92 (97)
T d1jwoa_          47 -------------------------GRDVIHYRVLHR-DGHLTIDEAVFFCNLMDMVEHYSKDKGAICTKLV   92 (97)
T ss_dssp             -------------------------TTEEEEEEEEES-SSEESSTTSCCBSCHHHHHHHHHHCCTTSSSCCC
T ss_pred             -------------------------cCceEEEEEEEc-CCcEEecCCcccCCHHHHHHHHhhCCCCCCccCC
Confidence                                     345667777553 4557777778899999999999999888877764

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=3.2e-11  Score=97.44  Aligned_cols=95  Identities=32%  Similarity=0.592  Sum_probs=74.8

Q ss_pred             CCcCCCCCCHHHHHHHHcCC-CCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQE-DKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~-~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ++|+++.++|.+|+++|... .++|+||||.|.+ .+.|++|++.....                               
T Consensus         6 ~~Wy~g~i~R~eAe~~L~~~g~~~G~FLVR~S~~~~g~~~Lsv~~~~~~-------------------------------   54 (104)
T d1g83a2           6 EEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDM-------------------------------   54 (104)
T ss_dssp             SSSBCTTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECSS-------------------------------
T ss_pred             CCCcCCCCCHHHHHHHHHhcCCCCCcEEEeccCCCCCCeEEEEEEeecC-------------------------------
Confidence            46999999999999988754 4689999999965 77888887652110                               


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                               ....++|+.|....++.|++.....|.++.+||+||+..+.++++++.
T Consensus        55 -------------------------~~~~v~h~~i~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~~gL~~~L~  102 (104)
T d1g83a2          55 -------------------------KGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLSSRLV  102 (104)
T ss_dssp             -------------------------SCEEEEEEEEEECTTSCEEETTTEEESSHHHHHHHHHHCCTTSSSCCC
T ss_pred             -------------------------cCCeEEEEEEEEcCCCCEEecCCcccCCHHHHHHHHhhCCCCCceeCC
Confidence                                     023567888877777788888888899999999999998888777664

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=9.1e-12  Score=122.63  Aligned_cols=78  Identities=17%  Similarity=0.083  Sum_probs=63.6

Q ss_pred             cCceeEe-EecccccceEEEEEEeCceeeEEeecCCCCHHHHHHHHHHHhc-CCCCceeceeeEEEe----CCeeEEEEc
Q psy17476        429 AELMLLE-ELGSGQFGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTR-LQHQNLVQLYGVCSK----HRPIYIVTD  502 (513)
Q Consensus       429 ~~~~~~~-~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~~~~f~~E~~il~~-l~HpNIV~l~g~~~~----~~~~~lV~E  502 (513)
                      ++|.+.. .||+|+||.||+|++..++..+|+|.... ...+.+|+.+|.+ ++|||||++++++.+    +..+|||||
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmE   89 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   89 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEE
Confidence            5787764 69999999999999987777777775432 3567899999765 589999999999975    467999999


Q ss_pred             cCCCC
Q psy17476        503 TSSFR  507 (513)
Q Consensus       503 ~~~~G  507 (513)
                      ||+||
T Consensus        90 y~~gg   94 (335)
T d2ozaa1          90 CLDGG   94 (335)
T ss_dssp             CCCSE
T ss_pred             CCCCC
Confidence            99985

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.19  E-value=1.6e-11  Score=120.43  Aligned_cols=81  Identities=16%  Similarity=0.236  Sum_probs=68.9

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeec-CCCCHHHHHHHHHHHhcCC-CCceeceeeEEEeC--CeeEEEEcc
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKE-GTMSEDDFIEEAKVMTRLQ-HQNLVQLYGVCSKH--RPIYIVTDT  503 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~-~~~~~~~f~~E~~il~~l~-HpNIV~l~g~~~~~--~~~~lV~E~  503 (513)
                      .++|++.+.||+|+||+||+|+.+.++..+|+|. .....+.+.+|+.+|++++ |||||++++++...  ..+++||||
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~  113 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH  113 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEEC
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEee
Confidence            3679999999999999999999987777776664 3345678999999999995 99999999999853  569999999


Q ss_pred             CCCCc
Q psy17476        504 SSFRL  508 (513)
Q Consensus       504 ~~~Gl  508 (513)
                      |.+|.
T Consensus       114 ~~~~~  118 (328)
T d3bqca1         114 VNNTD  118 (328)
T ss_dssp             CCSCB
T ss_pred             cCCCc
Confidence            99875

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=9.8e-12  Score=123.46  Aligned_cols=80  Identities=20%  Similarity=0.266  Sum_probs=65.1

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCC---CCH---HHHHHHHHHHhcCCCCceeceeeEEEeC------Ce
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGT---MSE---DDFIEEAKVMTRLQHQNLVQLYGVCSKH------RP  496 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~---~~~---~~f~~E~~il~~l~HpNIV~l~g~~~~~------~~  496 (513)
                      ++|++.+.||+|+||+||+|+++.++..+|+|...   .+.   +.+.+|+.+|++++|||||++++++...      ..
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            46999999999999999999998776777666432   222   3588999999999999999999999643      67


Q ss_pred             eEEEEccCCCCc
Q psy17476        497 IYIVTDTSSFRL  508 (513)
Q Consensus       497 ~~lV~E~~~~Gl  508 (513)
                      +|+|||||.+|+
T Consensus        97 ~~iv~Ey~~~~l  108 (355)
T d2b1pa1          97 VYLVMELMDANL  108 (355)
T ss_dssp             EEEEEECCSEEH
T ss_pred             eEEEEeccchHH
Confidence            899999999987

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=2.4e-11  Score=98.83  Aligned_cols=97  Identities=42%  Similarity=0.790  Sum_probs=72.4

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      .+|+++.++|.+|+++|....++|+||||.|++.+.|+||++....-.                                
T Consensus         6 ~~Wy~g~isR~eAe~lL~~~~~~G~FLVR~S~~~g~y~LSv~~~~~~~--------------------------------   53 (108)
T d1luia_           6 YEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIIS--------------------------------   53 (108)
T ss_dssp             STTBCTTCCHHHHHHHHHHHCCTTEEEEEECCTTTCEEEEEECSCCTT--------------------------------
T ss_pred             CCCcCCCCCHHHHHHHHHhcCCCCeEEEEecCCCCCEEEEEEecCCcc--------------------------------
Confidence            469999999999999996656899999999988889999987521100                                


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCc--cEEEecCcccCChhhhhhcccccCCCCccccCc
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRG--EFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKT  406 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~--~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~  406 (513)
                                             ....++|+.|....++  .|++.+...|.++.+||+||+..+.++.+.+..
T Consensus        54 -----------------------~~~~i~h~~I~~~~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~~L~~~L~~  104 (108)
T d1luia_          54 -----------------------ENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNGGGLVTRLRY  104 (108)
T ss_dssp             -----------------------TCSCEEEEECEECCCSSCCEESSSSCCBSSHHHHHHHHHTTCCSSSSSSSE
T ss_pred             -----------------------cCCceeEEEEEEecCCCceeecCCCcccCCHHHHHHHHhhCCCCCccCCCC
Confidence                                   0133455555544333  456666788999999999999988887776643

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=3.7e-11  Score=96.34  Aligned_cols=89  Identities=28%  Similarity=0.531  Sum_probs=71.3

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|.+|+++|.. .++|+||||.|.+ .+.|+||++.                                    
T Consensus         4 ~PWy~g~isR~~Ae~lL~~-~~~G~FLVR~S~~~~g~y~LSv~~------------------------------------   46 (101)
T d1k9aa2           4 MPWFHGKITREQAERLLYP-PETGLFLVRESTNYPGDYTLCVSC------------------------------------   46 (101)
T ss_dssp             CTTBCTTCCHHHHHHHTCS-CCTTEEEEEECSSSTTSEEEEEEC------------------------------------
T ss_pred             CCccCCCCCHHHHHHHHcC-CCCCCEEEeccCCCCCCEEEEEEe------------------------------------
Confidence            4599999999999999976 5689999999865 6788888764                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCccccCc
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRLKT  406 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~~~  406 (513)
                                               .+.+.|++|... ++.|++.+...|.++.+||+||+..++++.+.+..
T Consensus        47 -------------------------~~~v~H~~I~~~-~~~~~~~~~~~F~sl~~LV~~y~~~~~gl~~~L~~   93 (101)
T d1k9aa2          47 -------------------------EGKVEHYRIMYH-ASKLSIDEEVYFENLMQLVEHYTTDADGLCTRLIK   93 (101)
T ss_dssp             -------------------------SSSEEEEEEEEE-TTEEESSSSSCBSSHHHHHHHHHHCCTTSSSCCCE
T ss_pred             -------------------------CCccEEEEEEEc-CCCceecCCcccCCHHHHHHHHhhCCCCCceeCCc
Confidence                                     345667777653 44577777788999999999999998888877643

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=7.7e-12  Score=119.58  Aligned_cols=79  Identities=14%  Similarity=0.172  Sum_probs=65.8

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCC----------CHHHHHHHHHHHhcCC--CCceeceeeEEEeCCe
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM----------SEDDFIEEAKVMTRLQ--HQNLVQLYGVCSKHRP  496 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~----------~~~~f~~E~~il~~l~--HpNIV~l~g~~~~~~~  496 (513)
                      ++|++.+.||+|+||.||+|++..++..+|+|....          ....+.+|+.+|++++  |||||++++++.+.+.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            579999999999999999999987766666553211          1134778999999986  9999999999999999


Q ss_pred             eEEEEccCCCC
Q psy17476        497 IYIVTDTSSFR  507 (513)
Q Consensus       497 ~~lV~E~~~~G  507 (513)
                      +|+||||+.++
T Consensus        84 ~~lv~e~~~~~   94 (273)
T d1xwsa_          84 FVLILERPEPV   94 (273)
T ss_dssp             EEEEEECCSSE
T ss_pred             EEEEEEeccCc
Confidence            99999999874

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=2.4e-11  Score=118.61  Aligned_cols=81  Identities=27%  Similarity=0.439  Sum_probs=66.8

Q ss_pred             CcCceeEeEecccccceEEEEEEeCceeeEEeecCCC------CHHHHHHHHHHHhcCCCCceeceeeEEEe--------
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM------SEDDFIEEAKVMTRLQHQNLVQLYGVCSK--------  493 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~------~~~~f~~E~~il~~l~HpNIV~l~g~~~~--------  493 (513)
                      -++|++.+.||+|+||+||+|+++.++..+|+|....      ....+.+|+.+|++++||||+++++++..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            3689999999999999999999987777777664221      23568999999999999999999999865        


Q ss_pred             CCeeEEEEccCCCCc
Q psy17476        494 HRPIYIVTDTSSFRL  508 (513)
Q Consensus       494 ~~~~~lV~E~~~~Gl  508 (513)
                      +..+|+|||||.+|+
T Consensus        89 ~~~~~iv~e~~~~~~  103 (318)
T d3blha1          89 KGSIYLVFDFCEHDL  103 (318)
T ss_dssp             --CEEEEEECCCEEH
T ss_pred             CceEEEEEeccCCCc
Confidence            346899999999887

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.14  E-value=4.8e-11  Score=96.25  Aligned_cols=87  Identities=23%  Similarity=0.478  Sum_probs=67.7

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      ++|+++.++|.+|+++|.....+|+||||.+.+.+.|+||++.                                     
T Consensus         9 ~~Wy~g~i~R~eAe~lL~~~~~~G~FLVR~S~~~~~yvLSv~~-------------------------------------   51 (105)
T d2fcia1           9 KEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRA-------------------------------------   51 (105)
T ss_dssp             SCCCCSSSCSHHHHHHHHHSSSSCCEEEEECSSTTCEEEEEEE-------------------------------------
T ss_pred             CCCccCCCCHHHHHHHHHhCCCCCeEEEEecCCCCCEEEEEEe-------------------------------------
Confidence            4699999999999999976566899999998777888888765                                     


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCCcccc
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGLASRL  404 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~~~~~  404 (513)
                                              .+.++|++|..+  +.+++.+...|.++.+||+||+..+.++..++
T Consensus        52 ------------------------~~~v~H~~I~~~--~~~~~~~~~~F~sl~~LV~~y~~~~~~~~~~L   95 (105)
T d2fcia1          52 ------------------------EGKIKHCRVQQE--GQTVMLGNSEFDSLVDLISYYEKHPLYRKMKL   95 (105)
T ss_dssp             ------------------------TTEECCCEEBCC--SSCEECSSSEESTTHHHHHHHHHSCCSTTCSS
T ss_pred             ------------------------ccccEEEEEEec--CCeEecCCcccCCHHHHHHHHhhCCCCCccCC
Confidence                                    245666666432  33445566789999999999998877666655

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=7.4e-11  Score=93.52  Aligned_cols=82  Identities=32%  Similarity=0.662  Sum_probs=64.2

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|.+|+++|....++|+||||.|.+ ++.|+|+++.                                    
T Consensus         3 ~pWy~g~isR~~Ae~lL~~~~~~G~FLvR~S~~~~g~~~LSv~~------------------------------------   46 (96)
T d1jyra_           3 MAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKF------------------------------------   46 (96)
T ss_dssp             CTTBCCSCCHHHHHHHHHTCCSTTBEEEEECSSSTTCEEEEEEE------------------------------------
T ss_pred             CCccCCCCCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEEe------------------------------------
Confidence            359999999999999997656899999999965 6789888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSG  398 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~  398 (513)
                                               .+.+.|+.|.++.++.|.+ ....|.++.+||+||...+.
T Consensus        47 -------------------------~~~v~H~~I~~~~~g~~~~-~~~~F~sl~~LV~~y~~~~l   85 (96)
T d1jyra_          47 -------------------------GNDVQHFKVLRDGAGKYFL-WVVKFNSLNELVDYHRSTSV   85 (96)
T ss_dssp             -------------------------TTEEEEEECEECTTSCEES-SSCEESSHHHHHHHTTSSCS
T ss_pred             -------------------------CCceEEEEEEECCCCeEEe-CCccCCCHHHHHHHHhhCCC
Confidence                                     3456677776665554443 45679999999999988653

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=7.5e-11  Score=95.34  Aligned_cols=90  Identities=27%  Similarity=0.534  Sum_probs=65.7

Q ss_pred             CCcCCCCCCHHHHHHHHcCC-CCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQE-DKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~-~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ++|+++.++|.+|+++|... .++|+||||.|.+ .+.|+||++.   +..+                            
T Consensus         5 ~~Wyhg~isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y~LSv~~---~~~v----------------------------   53 (105)
T d1nrva_           5 QHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCH---HQKI----------------------------   53 (105)
T ss_dssp             STTBCTTCCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEE---TTEE----------------------------
T ss_pred             CcccCCCCCHHHHHHHHhhcCCCCceEEEEeCCCCCCCEEEEEEE---CCce----------------------------
Confidence            46999999999999999754 4689999999975 6789999875   3344                            


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCc---cEEEec-CcccCChhhhhhcccccCCCCccccC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRG---EFFLSE-KHCCHSIPEVVNYHRHNSGGLASRLK  405 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~---~~~i~~-~~~F~sl~eLi~~~~~~~~~~~~~~~  405 (513)
                                                    .|+.|....++   .|.+.+ ...|.++.+||+||..++.++++++.
T Consensus        54 ------------------------------~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~~L~~~L~  100 (105)
T d1nrva_          54 ------------------------------KNFQILPCEDDGQTFFSLDDGNTKFSDLIQLVDFYQLNKGVLPCKLK  100 (105)
T ss_dssp             ------------------------------EEEEEEEC-----CCEESSTTSSCBSSHHHHHHHHTTCCTTSSSCCC
T ss_pred             ------------------------------eEEEEEEecCCCeEEEEECCCCcccCCHHHHHHHhccCcCCCCccCC
Confidence                                          45544443222   233333 45799999999999998888877664

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.1e-10  Score=94.22  Aligned_cols=89  Identities=24%  Similarity=0.464  Sum_probs=65.8

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      .+|+++.++|.+|+++|.....+|+||||.|.+ .+.|++++..   ...+.||+|                        
T Consensus         4 ~pwyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~~g~~~Lsv~~---~~~v~H~~I------------------------   56 (104)
T d1d4ta_           4 VAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLY---HGYIYTYRV------------------------   56 (104)
T ss_dssp             CTTBCCSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEE---TTEEEEEEE------------------------
T ss_pred             CCccccCCCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEec---CCCceEEEE------------------------
Confidence            469999999999999997555789999999965 7789998765   334455555                        


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEe-----cCcccCChhhhhhcccccCCCCcccc
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLS-----EKHCCHSIPEVVNYHRHNSGGLASRL  404 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~-----~~~~F~sl~eLi~~~~~~~~~~~~~~  404 (513)
                                                        .+..++.+.+.     ....|.++.+|+++|.....++...+
T Consensus        57 ----------------------------------~~~~~~~~~~~~~~~~~~~~F~sl~~Li~~y~~~~~gl~~~L   98 (104)
T d1d4ta_          57 ----------------------------------SQTETGSWSAETAPGVHKRYFRKIKNLISAFQKPDQGIVIPL   98 (104)
T ss_dssp             ----------------------------------EECTTSCEEECBCTTSCCCCBSSHHHHHHHHTSSSSSSSSCC
T ss_pred             ----------------------------------EEcCCCcEEEeeccCCCCcccCCHHHHHHHHhhCCCCCcEeC
Confidence                                              44444433332     24569999999999998877766555

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.4e-10  Score=94.20  Aligned_cols=83  Identities=24%  Similarity=0.414  Sum_probs=66.6

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      +.|+++.++|.+|+++|.....+|.||||.|.+ .+.|+||++.                                    
T Consensus         3 ~~Wy~g~isR~~Ae~lL~~~~~~G~FLvR~S~~~~g~y~LSv~~------------------------------------   46 (109)
T d2shpa2           3 RRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRR------------------------------------   46 (109)
T ss_dssp             STTBCSSCCHHHHHHHHHHHCCTTEEEEEECSSSTTCEEEEEEE------------------------------------
T ss_pred             CccccCCCCHHHHHHHHhhCCCCCeEEEEecCCCCCCEEEEEEe------------------------------------
Confidence            469999999999999987656689999999965 7789888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGG  399 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~  399 (513)
                                               .+.+.|+.|.. .++.|++.+...|.++.+||+||......
T Consensus        47 -------------------------~~~v~H~~I~~-~~~~~~~~~~~~F~sl~~LV~~y~~~~~~   86 (109)
T d2shpa2          47 -------------------------NGAVTHIKIQN-TGDYYDLYGGEKFATLAELVQYYMEHHGQ   86 (109)
T ss_dssp             -------------------------TTEEEEEEEEC-SSSCEEETTSCEESSHHHHHHHHHTCTTC
T ss_pred             -------------------------CCcEEEEEEEE-cCCeEEEcCCcccCCHHHHHHHHHHCCCC
Confidence                                     34566777754 44567887888899999999999876543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.2e-11  Score=118.03  Aligned_cols=81  Identities=19%  Similarity=0.170  Sum_probs=66.7

Q ss_pred             CCcCceeEeEecccccceEEEEEEeC---ceeeEEeecCC--------CCHHHHHHHHHHHhcCCC-CceeceeeEEEeC
Q psy17476        427 DPAELMLLEELGSGQFGVVRRGKWRG---SIDVAMMKEGT--------MSEDDFIEEAKVMTRLQH-QNLVQLYGVCSKH  494 (513)
Q Consensus       427 ~~~~~~~~~~lG~G~fG~V~~g~~~~---~~~v~~~k~~~--------~~~~~f~~E~~il~~l~H-pNIV~l~g~~~~~  494 (513)
                      ..++|++.+.||+|+||+||+|....   ++.++|+|...        ...+.+.+|+++|++++| ||||++++++.+.
T Consensus        22 ~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~  101 (322)
T d1vzoa_          22 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE  101 (322)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred             chhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccC
Confidence            34789999999999999999998743   44555555321        234568899999999976 8999999999999


Q ss_pred             CeeEEEEccCCCC
Q psy17476        495 RPIYIVTDTSSFR  507 (513)
Q Consensus       495 ~~~~lV~E~~~~G  507 (513)
                      ..+++|||||.+|
T Consensus       102 ~~~~~v~e~~~~~  114 (322)
T d1vzoa_         102 TKLHLILDYINGG  114 (322)
T ss_dssp             TEEEEEECCCCSC
T ss_pred             Cceeeeeeccccc
Confidence            9999999999987

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=9.2e-11  Score=115.81  Aligned_cols=89  Identities=20%  Similarity=0.304  Sum_probs=66.3

Q ss_pred             CCccccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC------HHHHHHHHHHHhcCCCCceeceeeEEEeC
Q psy17476        421 HDKWEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS------EDDFIEEAKVMTRLQHQNLVQLYGVCSKH  494 (513)
Q Consensus       421 ~~~~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~------~~~f~~E~~il~~l~HpNIV~l~g~~~~~  494 (513)
                      ...|+++ ++|++.+.||+|+||+||+|+...++..+|+|.....      .+.+.+|+++|++++|||||++++++...
T Consensus        11 ~~~~~~~-~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~   89 (348)
T d2gfsa1          11 KTIWEVP-ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   89 (348)
T ss_dssp             SSEEEEE-TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             CccccCC-CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeec
Confidence            3457775 6799999999999999999998877777776643322      24688999999999999999999999643


Q ss_pred             ------CeeEEEEccCCCCccc
Q psy17476        495 ------RPIYIVTDTSSFRLGL  510 (513)
Q Consensus       495 ------~~~~lV~E~~~~Gl~~  510 (513)
                            ...+++|+++.+.|..
T Consensus        90 ~~~~~~~~~~i~~~~~gg~L~~  111 (348)
T d2gfsa1          90 RSLEEFNDVYLVTHLMGADLNN  111 (348)
T ss_dssp             SSTTTCCCCEEEEECCSEEHHH
T ss_pred             cccccCceEEEEEeecCCchhh
Confidence                  2345555444333443

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=1.1e-10  Score=112.99  Aligned_cols=81  Identities=22%  Similarity=0.337  Sum_probs=62.5

Q ss_pred             CcCceeEeEecccccceEEEEEEeCc-eeeEEeecC------CCCHHHHHHHHHHHhcC---CCCceeceeeEEEe----
Q psy17476        428 PAELMLLEELGSGQFGVVRRGKWRGS-IDVAMMKEG------TMSEDDFIEEAKVMTRL---QHQNLVQLYGVCSK----  493 (513)
Q Consensus       428 ~~~~~~~~~lG~G~fG~V~~g~~~~~-~~v~~~k~~------~~~~~~f~~E~~il~~l---~HpNIV~l~g~~~~----  493 (513)
                      .++|++.+.||+|+||.||+|++..+ ...+|+|..      ......+.+|+.+|+.|   +|||||+++++|..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            36899999999999999999998643 455555521      11233577888887766   89999999999964    


Q ss_pred             -CCeeEEEEccCCCCc
Q psy17476        494 -HRPIYIVTDTSSFRL  508 (513)
Q Consensus       494 -~~~~~lV~E~~~~Gl  508 (513)
                       ...++++||||.+|+
T Consensus        86 ~~~~~~~~~e~~~~~~  101 (305)
T d1blxa_          86 RETKLTLVFEHVDQDL  101 (305)
T ss_dssp             SEEEEEEEEECCSCBH
T ss_pred             cCceEEEEEEeccCCc
Confidence             247899999999986

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=1.1e-10  Score=115.33  Aligned_cols=85  Identities=18%  Similarity=0.278  Sum_probs=62.5

Q ss_pred             cccCCcCceeEeEecccccceEEEEEEeCceeeEEeecCCCC-----HHHHHHHHHHHhcCCCCceeceeeEEEeCC---
Q psy17476        424 WEIDPAELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS-----EDDFIEEAKVMTRLQHQNLVQLYGVCSKHR---  495 (513)
Q Consensus       424 ~~~~~~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~-----~~~f~~E~~il~~l~HpNIV~l~g~~~~~~---  495 (513)
                      |++. +.|++.+.||+|+||+||+|+.+.++..+|+|.....     .+.+++|+.+|++++|||||++++++....   
T Consensus         4 ~~i~-~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~   82 (345)
T d1pmea_           4 FDVG-PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ   82 (345)
T ss_dssp             CCCC-TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTT
T ss_pred             cCcC-CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccc
Confidence            3443 3599999999999999999998877776766643321     246889999999999999999999997643   


Q ss_pred             --eeEEEEccCCCCcc
Q psy17476        496 --PIYIVTDTSSFRLG  509 (513)
Q Consensus       496 --~~~lV~E~~~~Gl~  509 (513)
                        .+||+|+++.+.|.
T Consensus        83 ~~~~~l~~~~~~g~L~   98 (345)
T d1pmea_          83 MKDVYLVTHLMGADLY   98 (345)
T ss_dssp             CCCEEEEEECCCEEHH
T ss_pred             cceEEEEEeecCCchh
Confidence              46777776655553

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.00  E-value=4.4e-10  Score=89.17  Aligned_cols=80  Identities=26%  Similarity=0.581  Sum_probs=63.9

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      ..|+++.++|..|+++|.. .++|+||||.|++ ++.|+||++.                                    
T Consensus         6 ~~Wy~g~isR~~Ae~lL~~-~~~G~FLVR~S~~~~g~~~LSv~~------------------------------------   48 (97)
T d1r1qa_           6 PEWFHEGLSRHQAENLLMG-KDIGFFIIRASQSSPGDFSISVRH------------------------------------   48 (97)
T ss_dssp             CTTBCTTCCHHHHHHHHHT-SCTTCEEEEECSSSTTCEEEEEEC------------------------------------
T ss_pred             CCccCCCCCHHHHHHHHhc-CCCCCEEEeecCCCCCCEEEEEEe------------------------------------
Confidence            3599999999999999975 5799999999965 6788888764                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNS  397 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~  397 (513)
                                               .+.+.|+.|....++.|. .....|.++.+||+||+.++
T Consensus        49 -------------------------~~~v~H~~I~~~~~g~~~-~~~~~F~sl~~LV~~y~~~~   86 (97)
T d1r1qa_          49 -------------------------EDDVQHFKVMRDTKGNYF-LWTEKFPSLNKLVDYYRTTS   86 (97)
T ss_dssp             -------------------------SSSEEEEECEECTTCCEE-SSSCCBSSHHHHHHHTTTSC
T ss_pred             -------------------------cCCeEEEEEEEcCCCeEE-eCCCCcCCHHHHHHHHccCC
Confidence                                     345677777776666554 44568999999999998864

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=3.4e-10  Score=92.57  Aligned_cols=94  Identities=29%  Similarity=0.551  Sum_probs=67.4

Q ss_pred             CCcCCCCCCHHHHHHHHcCC-CCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQE-DKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~-~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ++|+++.++|.+|+++|... .++|+||||.+.+ .+.|+||++.   +.                              
T Consensus        10 ~~Wy~g~isR~~Ae~lL~~~g~~dG~FLvR~S~~~~g~y~LSv~~---~~------------------------------   56 (113)
T d2qmsa1          10 QLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCH---LQ------------------------------   56 (113)
T ss_dssp             CTTEEEEBCHHHHHHHHHHTTCCTTEEEEEECSSCTTCEEEEEEE---TT------------------------------
T ss_pred             CCccCCCCCHHHHHHHHhccCCCCccEEEEeccCCCCCEEEEEEe---CC------------------------------
Confidence            45999999999999999753 5789999999965 6789999875   33                              


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCC-cc--EEEec-CcccCChhhhhhcccccCCCCccccCcCC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSR-GE--FFLSE-KHCCHSIPEVVNYHRHNSGGLASRLKTSP  408 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~-~~--~~i~~-~~~F~sl~eLi~~~~~~~~~~~~~~~~~~  408 (513)
                                                  .+.|+.|....+ +.  |.+.+ ...|.++.+||+||..+++++.+.+. .|
T Consensus        57 ----------------------------~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~LI~~y~~~~~~L~~~L~-~p  107 (113)
T d2qmsa1          57 ----------------------------KVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVEFHQLNRGILPCLLR-HC  107 (113)
T ss_dssp             ----------------------------EEEEEEEEEEESSSCEEEESSTTSSCBSSHHHHHHHHTTCCTTSSSCCC-EE
T ss_pred             ----------------------------eEEEEEEEEeCCCCeEEEEecCCCcccCCHHHHHHHhccCCCCCccccC-CC
Confidence                                        344555533222 22  22233 34699999999999999888777664 33


Q ss_pred             CC
Q psy17476        409 CD  410 (513)
Q Consensus       409 ~~  410 (513)
                      |+
T Consensus       108 c~  109 (113)
T d2qmsa1         108 CT  109 (113)
T ss_dssp             CC
T ss_pred             Cc
Confidence            43

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.98  E-value=2.7e-10  Score=109.78  Aligned_cols=82  Identities=16%  Similarity=0.133  Sum_probs=68.7

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecC--CCCHHHHHHHHHHHhcCCC-CceeceeeEEEeCCeeEEEEccCC
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG--TMSEDDFIEEAKVMTRLQH-QNLVQLYGVCSKHRPIYIVTDTSS  505 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~--~~~~~~f~~E~~il~~l~H-pNIV~l~g~~~~~~~~~lV~E~~~  505 (513)
                      ..|++.+.||+|+||.||+|++..++..+|+|..  ......+.+|+++++.++| +||+.+++++..+...++|||||.
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~~   84 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLG   84 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEecC
Confidence            5789999999999999999999877666666642  2233568889999999976 899999999999999999999998


Q ss_pred             CCccc
Q psy17476        506 FRLGL  510 (513)
Q Consensus       506 ~Gl~~  510 (513)
                      ++|..
T Consensus        85 ~~l~~   89 (293)
T d1csna_          85 PSLED   89 (293)
T ss_dssp             CBHHH
T ss_pred             CCHHH
Confidence            87743

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.98  E-value=3.7e-10  Score=108.97  Aligned_cols=80  Identities=16%  Similarity=0.093  Sum_probs=63.5

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecC--CCCHHHHHHHHHHHhcCCCCceece-eeEEEeCCeeEEEEccCC
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEG--TMSEDDFIEEAKVMTRLQHQNLVQL-YGVCSKHRPIYIVTDTSS  505 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~--~~~~~~f~~E~~il~~l~HpNIV~l-~g~~~~~~~~~lV~E~~~  505 (513)
                      +.|++.+.||+|+||.||+|++..++..+|+|..  ....+++.+|+++|++++|+|+|.+ .++..+.+..++|||||.
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~   86 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG   86 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC
Confidence            3599999999999999999999876666666632  2233468899999999987776554 555577789999999999


Q ss_pred             CCc
Q psy17476        506 FRL  508 (513)
Q Consensus       506 ~Gl  508 (513)
                      +++
T Consensus        87 ~~l   89 (299)
T d1ckia_          87 PSL   89 (299)
T ss_dssp             CBH
T ss_pred             Cch
Confidence            887

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=2.8e-09  Score=85.99  Aligned_cols=81  Identities=28%  Similarity=0.527  Sum_probs=64.2

Q ss_pred             CcCCCCCCHHHHHHHHcCCCCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhccC
Q psy17476        256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKE  335 (513)
Q Consensus       256 ~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~~  335 (513)
                      +|+++.++|.+|+++|.. .++|+||||.+.+...|++++..                                      
T Consensus        10 pWy~g~isR~eAe~lL~~-~~~G~FLvR~S~~~~~y~Lsv~~--------------------------------------   50 (106)
T d2cs0a1          10 EWFHGAISREDAENLLES-QPLGSFLIRVSHSHVGYTLSYKA--------------------------------------   50 (106)
T ss_dssp             SSBCSSCCHHHHHHHHHT-SCTTCEEEEECSSSSSEEEEECC--------------------------------------
T ss_pred             CCccCCCCHHHHHHHHcC-CCCCcEEEEecCCCCCEEEEEEe--------------------------------------
Confidence            499999999999999985 57999999998765558777654                                      


Q ss_pred             CcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEec-CcccCChhhhhhcccccCC
Q psy17476        336 GCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSE-KHCCHSIPEVVNYHRHNSG  398 (513)
Q Consensus       336 g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~-~~~F~sl~eLi~~~~~~~~  398 (513)
                                             .+.+.|+.|....++.|++.. ...|.++.+||.||+..+.
T Consensus        51 -----------------------~~~~~h~~I~~~~~g~~~~~~~~~~F~sl~eLV~~y~~~~~   91 (106)
T d2cs0a1          51 -----------------------QSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPI   91 (106)
T ss_dssp             -----------------------SSSCEEEEEEECTTSCEECTTCSCCBSSHHHHHHHHTTSCC
T ss_pred             -----------------------cCCceeEEEEEcCCCCEEEecCCccCCCHHHHHHHHHHCCC
Confidence                                   345677777777777676653 4579999999999998753

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.88  E-value=9.5e-10  Score=89.00  Aligned_cols=81  Identities=35%  Similarity=0.556  Sum_probs=61.3

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCCCCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhcc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDK  334 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~  334 (513)
                      ..|+++.++|.+|+++|.. .++|+||||.|+..+.|+||++.                                     
T Consensus         9 ~~Wy~g~isR~eAe~lL~~-~~~G~FLVR~S~~~~~y~Lsv~~-------------------------------------   50 (107)
T d1qada_           9 KTWNVGSSNRNKAENLLRG-KRDGTFLVRESSKQGCYACSVVV-------------------------------------   50 (107)
T ss_dssp             GGTEEEECCHHHHHHHHTT-CCTTEEEEEEC---CCEEEEEEE-------------------------------------
T ss_pred             CcccCCCCCHHHHHHHHcC-CCCCcEEEEecCCCCCEEEEEEe-------------------------------------
Confidence            4699999999999999975 57899999999777888888765                                     


Q ss_pred             CCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccC
Q psy17476        335 EGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNS  397 (513)
Q Consensus       335 ~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~  397 (513)
                                              .+.+.|+.|....++.+.......|.++.+||++|..++
T Consensus        51 ------------------------~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI~~Y~~~~   89 (107)
T d1qada_          51 ------------------------DGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHYQHTS   89 (107)
T ss_dssp             ------------------------TTEEEEEEEEEETTEEESSTTCCCBSSHHHHHHHHHHSC
T ss_pred             ------------------------cCCeEEEEEEECCCCeEEcCCCCccCCHHHHHHHHHhCc
Confidence                                    245666666665555444445667999999999998764

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=1.8e-09  Score=87.47  Aligned_cols=89  Identities=25%  Similarity=0.406  Sum_probs=67.9

Q ss_pred             cCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhccC
Q psy17476        257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKE  335 (513)
Q Consensus       257 w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~~  335 (513)
                      |+++.++|.+|+++|....++|+||||.|++ .+.|+||++...   .+.++.+                          
T Consensus         2 WyhG~i~R~~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~~---~~~~~~~--------------------------   52 (108)
T d2shpa3           2 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGD---DKGESND--------------------------   52 (108)
T ss_dssp             TBCCSCCHHHHHHHHHHTCCTTEEEEEECSSSTTCEEEEEEECC--------CC--------------------------
T ss_pred             CCcCCCCHHHHHHHHhhcCCCCeEEEEecCCCCCCeEEEEEecC---ccccccc--------------------------
Confidence            9999999999999997666899999999975 788999987621   1111111                          


Q ss_pred             CcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccC
Q psy17476        336 GCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNS  397 (513)
Q Consensus       336 g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~  397 (513)
                                            ....+.|+.|.. .++.|++.+...|.++.+|++||+.+.
T Consensus        53 ----------------------~~~~~~h~~i~~-~~~~~~~~~~~~F~sl~~LV~~y~~~~   91 (108)
T d2shpa3          53 ----------------------GKSKVTHVMIRC-QELKYDVGGGERFDSLTDLVEHYKKNP   91 (108)
T ss_dssp             ----------------------CCCEEEEEEEEE-ETTEEESSSSCCBSSHHHHHHHHHHSC
T ss_pred             ----------------------cccceeeEEEEe-CCCceEeCCCcccCCHHHHHHHHhhCC
Confidence                                  124577888865 456688888889999999999998864

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.85  E-value=3.3e-10  Score=87.87  Aligned_cols=43  Identities=30%  Similarity=0.565  Sum_probs=35.8

Q ss_pred             CCcCCCCCCHHHHHHHHcCC--CCCceEEEeecCC-CCceEEEEEe
Q psy17476        255 KAWYVGDMSRQRAESILKQE--DKEGCFVVRNSST-KGLYTLSLYT  297 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~--~~~g~fliR~s~~-~~~~~lsl~~  297 (513)
                      .+|+++.++|..|+++|...  .++|+||||.|++ .+.|+|+++.
T Consensus         5 ~pWyhg~isR~~Ae~lL~~~~~~~dG~FLvR~S~~~~g~~~Lsv~~   50 (86)
T d1rpya_           5 YPWFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNF   50 (86)
T ss_dssp             STTBCTTCCHHHHHHHHHTTGGGGTTCEEEEECSSSTTCEEEEEEE
T ss_pred             CcccCCCCCHHHHHHHHHhCCCCCCceEEEEecCCCCCcEEEEEEE
Confidence            35999999999999999764  3579999999865 6788888775

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=1.5e-09  Score=87.17  Aligned_cols=80  Identities=30%  Similarity=0.544  Sum_probs=61.3

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhc
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKD  333 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~  333 (513)
                      ++|+++.++|.+|+++|.   ++|+||||.|++ ++.|++|++.                                    
T Consensus         7 ~pWyhG~i~R~~Ae~lL~---~~G~FLVR~S~~~~g~~vLSv~~------------------------------------   47 (104)
T d1mila_           7 EPWFHGKLSRREAEALLQ---LNGDFLVRESTTTPGQYVLTGLQ------------------------------------   47 (104)
T ss_dssp             CTTBCSSCCHHHHHTTCC---STTEEEEEECCSSCSSEEEEEEE------------------------------------
T ss_pred             CCCcCCCCCHHHHHHHHh---cCCcEEEEecCCCCCCEEEEEEE------------------------------------
Confidence            469999999999999995   479999999865 6778888765                                    


Q ss_pred             cCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCCCC
Q psy17476        334 KEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSGGL  400 (513)
Q Consensus       334 ~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~~~  400 (513)
                                               .+.+.|+.|.. .++.|.+ +...|+++.+||+||+.+..++
T Consensus        48 -------------------------~~~v~H~~I~~-~~~~~~~-~~~~F~sl~~LV~~y~~~~~~~   87 (104)
T d1mila_          48 -------------------------SGQPKHLLLVD-PEGVVRT-KDHRFESVSHLISYHMDNHLPI   87 (104)
T ss_dssp             -------------------------TTEEEEEEEBC-TTSSEEC-SSCEESSHHHHHHHHHHHTCCE
T ss_pred             -------------------------ccccceEEEEe-CCCEEEe-CCeeECCHHHHHHHHhhCCCCc
Confidence                                     34566776643 3444544 4578999999999998865443

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=3.5e-09  Score=86.23  Aligned_cols=42  Identities=31%  Similarity=0.555  Sum_probs=36.1

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEe
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYT  297 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~  297 (513)
                      .+|+++.++|..|+++|.. .++|+||||.|.+ .+.|++|++.
T Consensus        11 ~~Wy~g~isR~~Ae~lL~~-~~~GtFLVR~S~~~~~~~~LSv~~   53 (112)
T d2izva2          11 NPCYWGVMDKYAAEALLEG-KPEGTFLLRDSAQEDYLFSVSFRR   53 (112)
T ss_dssp             CTTEEEECCHHHHHHHHTT-CCTTEEEEEECSSTTCSEEEEEEE
T ss_pred             CCCcCCCCCHHHHHHHHcc-CCCCcEEEeecCCCCCCeEEEEEe
Confidence            4699999999999999975 5789999999975 7778888765

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=9.8e-09  Score=83.17  Aligned_cols=96  Identities=26%  Similarity=0.407  Sum_probs=69.8

Q ss_pred             cCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhhccC
Q psy17476        257 WYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVKDKE  335 (513)
Q Consensus       257 w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l~~~  335 (513)
                      |+++.++|.+|+++|.. .++|+||||+|.+ .+.|+||++.   ...+.||+|.....+........            
T Consensus         2 Wy~g~isR~~Ae~lL~~-~~~G~FLVR~S~~~~~~~~LS~~~---~~~v~H~~I~~~~~~~~~~~~~~------------   65 (109)
T d2eyva1           2 WYWGRLSRQEAVALLQG-QRHGVFLVRDSSTSPGDYVLSVSE---NSRVSHYIINSSGPRPPVPPSPA------------   65 (109)
T ss_dssp             SCCBCCCHHHHHHHCSS-CSTTCEEEECCCSSSSCEEEEEEE---TTEEEEEEEECCCCSSCCCSSSS------------
T ss_pred             CCCCCCCHHHHHHHhcC-CCCCeEEeeecCCCCCCEEEEEEE---CCEEEEEEEEEcCCcceeecccc------------
Confidence            99999999999999964 5799999999965 7889999986   66799999977665543211110            


Q ss_pred             CcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCC
Q psy17476        336 GCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSG  398 (513)
Q Consensus       336 g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~  398 (513)
                                                  ..  .......+++.+...|+++.+||+||+.+..
T Consensus        66 ----------------------------~~--~~~~~~~~~~~~~~~F~sl~~LV~~y~~~~l   98 (109)
T d2eyva1          66 ----------------------------QP--PPGVSPSRLRIGDQEFDSLPALLEFYKIHYL   98 (109)
T ss_dssp             ----------------------------CC--CCSCCCCCEEETTEEESSHHHHHHHSSSSCS
T ss_pred             ----------------------------cc--ccccccceEEeCCeeeCCHHHHHHHHhhCcC
Confidence                                        00  0011122344566789999999999988654

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=98.77  E-value=4.8e-09  Score=72.86  Aligned_cols=52  Identities=42%  Similarity=0.919  Sum_probs=49.2

Q ss_pred             EEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCcee
Q psy17476        128 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK  179 (513)
Q Consensus       128 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~  179 (513)
                      |+|+|||.+...++|+|++|+++.|++..+++||.+++..|..|++|.+|++
T Consensus         1 V~Alydy~a~~~~eLs~~~Gd~~~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~   52 (53)
T d2rn8a1           1 VIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLV   52 (53)
T ss_dssp             EEESSCCCCSSTTBCCCCTTCEEEECCCSCSSCEEEECTTSCEEEECGGGEE
T ss_pred             CEEeeeECCCCCCeeeECCCCEEEEeEEcCCCeEEEEeCCCCEEEEeHHHEe
Confidence            6899999999999999999999999999999999998888999999999985

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.76  E-value=1.5e-09  Score=97.34  Aligned_cols=41  Identities=10%  Similarity=-0.049  Sum_probs=35.8

Q ss_pred             CchhHHHHHHHHHHHHHHHHHhcceeccccCcccccccCcc
Q psy17476         19 GNVGLLLDMCIQVCKGMAYLERHNYIHRETKKSLYPSSLNE   59 (513)
Q Consensus        19 ~~~~~~~~~~~qi~~gl~ylH~~~iiHrdikp~N~~~~~~~   59 (513)
                      ++...+..++.|++.||+|||++||+||||||+|||++.++
T Consensus       100 l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~  140 (191)
T d1zara2         100 VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG  140 (191)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCCC
Confidence            45567889999999999999999999999999997776554

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.71  E-value=1.1e-08  Score=74.79  Aligned_cols=58  Identities=52%  Similarity=1.026  Sum_probs=53.3

Q ss_pred             CcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceeecc
Q psy17476        125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE  182 (513)
Q Consensus       125 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~  182 (513)
                      ..+++|+|+|.+...++|+|++|+++.|++..+..||.+++..|..|++|.+|++...
T Consensus         2 ~~~v~Alydf~a~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yV~~~~   59 (67)
T d1gl5a_           2 SEIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKK   59 (67)
T ss_dssp             CSCEEECSCBCCSSSSBCCBCTTCEEEEEECSSSSEEEEECSSSCEEEEETTSEESST
T ss_pred             CEEEEECCCCCCCCcCCcCCCCCCEEEEEEecCCCcEEEEECCCCEEEEEhHHeEEec
Confidence            3578999999999999999999999999999999999998888899999999997654

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=2e-08  Score=80.35  Aligned_cols=51  Identities=35%  Similarity=0.571  Sum_probs=40.5

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEE
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHI  309 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i  309 (513)
                      .+|+++.++|..|+++|.. .++|+||||.|.+ .+.|+||++.   +..+.|++|
T Consensus        15 ~~Wy~g~i~R~~Ae~~L~~-~~~GtFLVR~S~~~~~~~~LSv~~---~~~v~H~~I   66 (103)
T d2c9wa2          15 TGWYWGSMTVNEAKEKLKE-APEGTFLIRDSSHSDYLLTISVKT---SAGPTNLRI   66 (103)
T ss_dssp             TSCBCTTCCHHHHHHHHTT-SCTTCEEEEECCSTTCSEEEEEEE---TTEEEEEEE
T ss_pred             CCCcCCCCCHHHHHHHhcC-CCCCceEEeccCCCCCCEEEEEEE---CCEEEEEEE
Confidence            4699999999999999974 5789999999976 6788888765   344555555

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.58  E-value=1e-08  Score=83.37  Aligned_cols=81  Identities=33%  Similarity=0.541  Sum_probs=61.5

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC--CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST--KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~--~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      .+|+++.++|.+|+++|.. .++|+||||.+++  .+.|++++..                                   
T Consensus        11 ~~WyhG~isR~eAe~lL~~-~~~G~FLVR~S~~~~~~~~~ls~~~-----------------------------------   54 (111)
T d1fu6a_          11 AEWYWGDISREEVNEKLRD-TADGTFLVRDASTKMHGDYTLTLRK-----------------------------------   54 (111)
T ss_dssp             CSSCCSSCCSHHHHHHSSS-CSSCCCCCBSSCCSSSCCSBCEEEE-----------------------------------
T ss_pred             CcCCCCCCCHHHHHHHhCc-CCCCEEEEEeccCCCCccEEEEEec-----------------------------------
Confidence            5699999999999999975 4689999999865  3457777654                                   


Q ss_pred             ccCCcEEEEecCCCCcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcccccCC
Q psy17476        333 DKEGCFVVRNSSTKGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYHRHNSG  398 (513)
Q Consensus       333 ~~~g~~LvR~s~~~~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~~~~~~  398 (513)
                                                .+.+.|+.|.. .++.|++.....|.++.+||++|.+.+.
T Consensus        55 --------------------------~~~~~H~~I~~-~~~~~~~~~~~~F~sl~~LV~~y~~~~l   93 (111)
T d1fu6a_          55 --------------------------GGNNKSIKIFH-RDGKYGFSDPLTFNSVVELINHYRNESL   93 (111)
T ss_dssp             --------------------------TTEEEECCCCC-TTTCCCTTTTSCCCCTTHHHHHHHTTCS
T ss_pred             --------------------------CCceEEEEEEE-cCCeEEECCCcccCCHHHHHHHHhhCcC
Confidence                                      23455666643 3455666667789999999999988753

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.53  E-value=6.7e-08  Score=68.01  Aligned_cols=55  Identities=35%  Similarity=0.741  Sum_probs=50.9

Q ss_pred             cEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceee
Q psy17476        126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE  180 (513)
Q Consensus       126 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~  180 (513)
                      ..+.++|||.+...++|+|++|+++.|++..++.||..++..|..|++|.+|+++
T Consensus         2 ~~v~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~vP~~yve~   56 (57)
T d1ckaa_           2 EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK   56 (57)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEC
T ss_pred             CEEEECCCCCcCCcCCcCCCCCCEEEEEEEcCCCeEEEEECCCCEEEEcHHHeEE
Confidence            4578999999999999999999999999999999999998889999999999863

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=1.1e-07  Score=68.32  Aligned_cols=59  Identities=32%  Similarity=0.765  Sum_probs=49.7

Q ss_pred             CCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeee-cCCCccccccCCceee
Q psy17476        121 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVK-DKNGSVGYIPSNYVKE  180 (513)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~g~~g~~pp~~~~~  180 (513)
                      ++....+++++|||.+...++|+|++||.+.|++..++ ||... ...|..|++|.+|+++
T Consensus         2 sP~~~~~~~al~dy~a~~~~eLs~~~Gd~i~v~~~~~~-ww~~~~~~~g~~G~~P~~yV~~   61 (62)
T d2iima1           2 SPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE-WWKAQSLTTGQEGFIPFNFVAK   61 (62)
T ss_dssp             CTTTTCEEEESSCBCCCSTTBCCBCTTCEEEEEECCSS-EEEEEETTTCCEEEEEGGGEEE
T ss_pred             CCCCCcEEEECCCCCcCCcCCcCCCCCCEEEEeEEcCC-CEEEEeccCCeEeEEcHHHEEe
Confidence            34567889999999999999999999999999988765 66544 4568999999999864

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=9e-08  Score=67.44  Aligned_cols=54  Identities=41%  Similarity=0.961  Sum_probs=49.2

Q ss_pred             EEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeec-CCCccccccCCceee
Q psy17476        127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKE  180 (513)
Q Consensus       127 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~g~~pp~~~~~  180 (513)
                      +++|+|||.+...++|+|++||.+.|++..++.||...+ ..|..|++|.+|+++
T Consensus         2 l~vAl~dy~a~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~vP~~yv~p   56 (57)
T d1efna_           2 LFVALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAP   56 (57)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEECSSCSEEEEEETTTTEEEEEEGGGEEE
T ss_pred             EEEECCCCCCCCcCCcCCCCCCEEEEEEecCCCCEEEEECCCCCEEEEeHHHeEE
Confidence            589999999999999999999999999999989998876 468999999999864

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.48  E-value=9.7e-08  Score=66.61  Aligned_cols=53  Identities=32%  Similarity=0.798  Sum_probs=48.8

Q ss_pred             EEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceee
Q psy17476        127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE  180 (513)
Q Consensus       127 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~  180 (513)
                      +++|+|+|.+...++|+|++|+.+.|++..++.||.++ ..|..|++|.+|++.
T Consensus         2 ~~vAl~dy~~~~~~eLs~~~Gd~v~v~~~~~~~Ww~g~-~~g~~G~~P~~yv~~   54 (55)
T d1u06a1           2 LVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE-VNDRQGFVPAAYVKK   54 (55)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEE-ETTEEEEEEGGGEEE
T ss_pred             EEEECCCCCCCCcCCccCCCCCEEEEeEEcCCCEEEEE-ECCeEEEEeHHHEEE
Confidence            68999999999999999999999999999999999987 468999999999863

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=7e-08  Score=70.40  Aligned_cols=58  Identities=48%  Similarity=0.940  Sum_probs=52.9

Q ss_pred             CCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceee
Q psy17476        123 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE  180 (513)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~  180 (513)
                      ...+.++++|+|.+...++|+|++||++.|++..+..||.+++..|..|++|.+|++.
T Consensus         6 ~~~~~v~Alydy~a~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~vP~~yv~~   63 (67)
T d1awwa_           6 SELKKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTE   63 (67)
T ss_dssp             SCCCEEEBSSCCCCSSSSSCCCCSSCEEECCCCCSSSEECCBCTTSCBCCEETTTBCC
T ss_pred             CCCEEEEECcCCCCCCcCCcCCCCCCEEEEEEEcCCCeEEEEECCCCEEEEcHHHeEE
Confidence            3456789999999999999999999999999998999999988889999999999864

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=7.4e-08  Score=69.01  Aligned_cols=56  Identities=27%  Similarity=0.567  Sum_probs=50.9

Q ss_pred             CCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceee
Q psy17476        124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE  180 (513)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~  180 (513)
                      .+..++++|+|.+...++|+|++||.+.|++..++.||..+. .|..|++|.+|+++
T Consensus         4 ~g~~v~Aly~y~a~~~~eLsf~~Gd~i~vl~~~~~~Ww~g~~-~g~~G~~P~~yVe~   59 (62)
T d1k4us_           4 KGSQVEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLEGES-KGKVGIFPKVFVED   59 (62)
T ss_dssp             CCEEEECCSCBCCCSSSBCCBCSSCEEEEEEESSSSCEEEEC-SSCEEEECGGGCCC
T ss_pred             CCCEEEECCCCCCCCcCCcCCCCCCEEEEeEEcCCCEEEEEE-CCcEEEEchHHeEE
Confidence            356799999999999999999999999999999999999875 68999999999865

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=1.3e-07  Score=66.13  Aligned_cols=54  Identities=37%  Similarity=0.753  Sum_probs=49.1

Q ss_pred             cEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceee
Q psy17476        126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE  180 (513)
Q Consensus       126 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~  180 (513)
                      ..+.++|+|.+...++|+|++||.+.|++..++.||.... .|..|++|.+|+++
T Consensus         2 tyv~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~   55 (56)
T d1gcqa_           2 TYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGAC-HGQTGMFPRNYVTP   55 (56)
T ss_dssp             EEEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEE
T ss_pred             EEEEECcCCCcCCcCCcCCCCCCEEEEEEecCCCEEEEEE-CCeEEEEEHhHEEE
Confidence            4578999999999999999999999999999999999876 58999999999864

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=1.9e-07  Score=68.87  Aligned_cols=60  Identities=33%  Similarity=0.590  Sum_probs=51.6

Q ss_pred             CCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecC-CccceeeecCCCccccccCCceeecc
Q psy17476        123 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT-QEHWWKVKDKNGSVGYIPSNYVKEKE  182 (513)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~g~~g~~pp~~~~~~~  182 (513)
                      ..+..++++|||.+...++|+|++||++.|++.. +..||.+++..|..|++|.+|++..+
T Consensus         4 p~g~~~~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~W~~~~~~~g~~G~~P~~yve~~~   64 (71)
T d1k9aa1           4 PSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE   64 (71)
T ss_dssp             CTTCEEEESSCBCCSSSSBCCBCTTCEEEEEEECSSTTEEEEECTTCCEEEEEGGGEEECC
T ss_pred             CCCCEEEEccCCCCCCCCCccCCCCCEEEEeEeccCCCEEEEEeCCCCEEEEchHHeEEcc
Confidence            3467799999999999999999999999999865 44677777777899999999998654

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.42  E-value=1.7e-07  Score=65.85  Aligned_cols=54  Identities=31%  Similarity=0.576  Sum_probs=45.6

Q ss_pred             EEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceee
Q psy17476        127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE  180 (513)
Q Consensus       127 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~  180 (513)
                      +++++|+|.+...++|+|++||.+.|++..+..||......|..|++|.+|+.+
T Consensus         2 ~~vAlydy~a~~~~eLs~~~Gd~i~vl~~~~~~~W~~~~~~g~~G~~P~~yv~~   55 (57)
T d1opka1           2 LFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITP   55 (57)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEECTTSSEEEEECSSCEEEEEGGGEEE
T ss_pred             EEEECccCCCCCcCCcCCCCCCEEEEeEecCCCCEEEEEECCCEeEEchhheEE
Confidence            689999999999999999999999999877665454444567889999999864

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=98.40  E-value=2.1e-07  Score=65.54  Aligned_cols=55  Identities=33%  Similarity=0.685  Sum_probs=50.2

Q ss_pred             CcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceee
Q psy17476        125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE  180 (513)
Q Consensus       125 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~  180 (513)
                      ++.+.|+|+|.+...++|+|++|+.+.|++..++.||.++. .|..|++|.+|+.+
T Consensus         2 ~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yvep   56 (58)
T d1sema_           2 TKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQL-NNRRGIFPSNYVCP   56 (58)
T ss_dssp             CCEEEESSCBCCSSTTBCCBCTTCEEEEEECSSSSEEEEEE-TTEEEEEEGGGEEE
T ss_pred             CEEEEECCCCCcCCcCCcCCCCCCEEEEeEEcCCCEEEEEE-CCeEEEEEhhhEEE
Confidence            45788999999999999999999999999999999999874 68999999999875

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=2.1e-07  Score=67.11  Aligned_cols=57  Identities=37%  Similarity=0.800  Sum_probs=51.0

Q ss_pred             cEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecC-CCccccccCCceeecc
Q psy17476        126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK-NGSVGYIPSNYVKEKE  182 (513)
Q Consensus       126 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~g~~g~~pp~~~~~~~  182 (513)
                      ..+||+|||.+...++|+|++||.+.+++..++.||..+.. .|..|++|.+|+++.+
T Consensus         3 ~~~vAlydf~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~vP~~yv~~~~   60 (64)
T d1fmka1           3 TTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD   60 (64)
T ss_dssp             EEEEESSCBCCCSSSBCCBCTTCEEEESCCCSSSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             eEEEECccCCCcCcCCcCCCCCCEEEEEEEcCCCcEEEEECCCCCEEEEehHHeEECc
Confidence            45799999999999999999999999999888899988764 6889999999998654

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=3e-07  Score=63.47  Aligned_cols=52  Identities=35%  Similarity=0.765  Sum_probs=47.6

Q ss_pred             EEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCcee
Q psy17476        127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK  179 (513)
Q Consensus       127 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~  179 (513)
                      .++++++|.+...++|+|++|+++.|++..++.||..+ ..|..|++|.+|++
T Consensus         2 ~yval~~y~a~~~~eLs~~~Gd~v~vl~~~~~gWw~g~-~~g~~G~~P~~yve   53 (53)
T d1wlpb1           2 PYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIR-KDDVTGYFPSMYLQ   53 (53)
T ss_dssp             EEEECSCBCCCSSSBCCBCTTCEEEEEECCTTSSEEEE-SSSCEEEECSTTEE
T ss_pred             eEEEeeeECCCCCCEecCCCCCEEEEEeecCCceEEEE-ECCcEeEecHHhCC
Confidence            46899999999999999999999999999999999987 56899999999873

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=1.8e-07  Score=65.52  Aligned_cols=53  Identities=32%  Similarity=0.673  Sum_probs=40.9

Q ss_pred             EEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCcee
Q psy17476        127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK  179 (513)
Q Consensus       127 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~  179 (513)
                      .++++|||.+...++|+|++|+.+.+++...+.||......|..|++|.+|++
T Consensus         2 ~a~Alydy~a~~~~ELs~~~Gd~v~v~~~~~~~~W~~~~~~g~~G~vP~nyve   54 (56)
T d1gria1           2 EAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIE   54 (56)
T ss_dssp             EEEECSCBCCCSSSCCCBCTTCEEEC------CCEEEEESSSCEEEEEGGGEE
T ss_pred             EEEEeeCCCCCCCCCcCCCCCCEEEEEeccCCCCeEEEEECCcEEEEehhhEE
Confidence            37899999999999999999999998887665555555567999999999985

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.37  E-value=2.8e-07  Score=64.68  Aligned_cols=54  Identities=33%  Similarity=0.713  Sum_probs=49.1

Q ss_pred             cEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceee
Q psy17476        126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE  180 (513)
Q Consensus       126 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~  180 (513)
                      +.+.|+|+|.+...++|+|++||.+.|++..++.||.... .|..|++|.+|+++
T Consensus         2 ~yarAlydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yve~   55 (57)
T d1utia_           2 RWARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRL-HNKLGLFPANYVAP   55 (57)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEE
T ss_pred             EEEEECcCCCCCCcCCcCCCCCCEEEEeEEcCCCEEEEEE-CCcEEEEEHHHEEE
Confidence            3578999999999999999999999999999999999875 68999999999874

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=3.2e-07  Score=66.40  Aligned_cols=57  Identities=42%  Similarity=0.842  Sum_probs=48.6

Q ss_pred             CcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeec-CCCccccccCCceeecc
Q psy17476        125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKEKE  182 (513)
Q Consensus       125 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~g~~pp~~~~~~~  182 (513)
                      ..+++|+|||.+...++|+|++||.+.|++.+ ++||...+ ..|..|++|.+|++..+
T Consensus         4 ~~~vvAlydy~~~~~~eLs~~~Gd~i~v~~~~-~~ww~~~~~~~g~~G~vP~~yv~~~~   61 (65)
T d1qcfa1           4 RIIVVALYDYEAIHHEDLSFQKGDQMVVLEES-GEWWKARSLATRKEGYIPSNYVARVD   61 (65)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEEECC-TTEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             cEEEEECCcCCCCCcCccCCCCCCEEEEEEEC-CCCEEEEEccCCCEEEEchHHeEECc
Confidence            46789999999999999999999999999865 46777655 46899999999998654

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.34  E-value=2.7e-07  Score=68.61  Aligned_cols=61  Identities=11%  Similarity=0.238  Sum_probs=52.9

Q ss_pred             CCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecC-----CCccccccCCceeec
Q psy17476        121 QMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK-----NGSVGYIPSNYVKEK  181 (513)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~g~~pp~~~~~~  181 (513)
                      +...+..++++|||.+...++|+|++||.+.|++..++.||.+++.     .|..|++|.+|+++.
T Consensus         3 s~s~g~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~~Ww~v~~~~~~~~~g~~G~vP~~yve~~   68 (74)
T d1wfwa_           3 SGSSGSTMTVIKDYYALKENEICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILAPF   68 (74)
T ss_dssp             SCCCSCEEECCSCBCCCSSSCCCBCTTCEEEEEEECTTSEEEEEECSCSSSSSEEEEEEGGGCCBC
T ss_pred             CCCCCCEEEEeEEECCCCCCCccCccCCEEEEEEEcCCCCEEEEeCccCCcCCeeeEEchHHeEEC
Confidence            4455678999999999999999999999999999999999998763     357899999998753

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=4.2e-07  Score=76.26  Aligned_cols=70  Identities=30%  Similarity=0.501  Sum_probs=58.1

Q ss_pred             CCcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeeccccceecCCCccccChhhhh
Q psy17476        255 KAWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVK  332 (513)
Q Consensus       255 ~~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~l  332 (513)
                      ..|++|.++|..|+++|..  ++|+||||+|.+ .+.|+||++.   +..++||+|..  +|.+++.+. .+.++.+++
T Consensus        35 ~~wyhG~isR~eAe~lL~~--~dGsFLVR~S~~~~g~y~LSv~~---~~~v~H~~I~~--~g~~~~~~~-~F~sl~eLV  105 (141)
T d1xa6a2          35 GREFHGIISREQADELLGG--VEGAYILRESQRQPGCYTLALRF---GNQTLNYRLFH--DGKHFVGEK-RFESIHDLV  105 (141)
T ss_dssp             CSSEEEECCHHHHHHHHCS--CTTBEEEEECSSSTTCEEEEEEE---TTEEEECCCEE--SSSEECSSS-CCCCSSHHH
T ss_pred             cceeeccCCHHHHHHHHcC--CCCeEEEEecCCCCCCEEEEEEE---CCEEEEEEEEE--CCCEEECCC-eECCHHHHH
Confidence            3599999999999999964  579999999975 7899999987   67899999975  567776654 688888775

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.33  E-value=3.5e-07  Score=89.84  Aligned_cols=79  Identities=19%  Similarity=0.217  Sum_probs=61.2

Q ss_pred             cCceeEeEecccccceEEEEEEeCceeeEEeecCCCC---HHHHHHHHHHHhcCC-----------CCceeceeeEEEeC
Q psy17476        429 AELMLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTMS---EDDFIEEAKVMTRLQ-----------HQNLVQLYGVCSKH  494 (513)
Q Consensus       429 ~~~~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~~---~~~f~~E~~il~~l~-----------HpNIV~l~g~~~~~  494 (513)
                      ..|++.+.||+|+||+||+|+...++..+|+|.....   .+.+.+|+++|++++           |+|||++++++...
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            4599999999999999999999877777777754443   356788999998876           47899999998653


Q ss_pred             --CeeEEEEccCCCC
Q psy17476        495 --RPIYIVTDTSSFR  507 (513)
Q Consensus       495 --~~~~lV~E~~~~G  507 (513)
                        ...+++|+++..+
T Consensus        93 ~~~~~~~~~~~~~~~  107 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLG  107 (362)
T ss_dssp             ETTEEEEEEEECCCC
T ss_pred             cccceeeeeeecccc
Confidence              4566777766543

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.31  E-value=4.5e-07  Score=63.83  Aligned_cols=53  Identities=36%  Similarity=0.805  Sum_probs=48.8

Q ss_pred             cEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCcee
Q psy17476        126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVK  179 (513)
Q Consensus       126 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~  179 (513)
                      +.+.++|+|.+...++|+|++|+.+.|++..++.||..+. .|..|++|.+|+.
T Consensus         3 rr~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yV~   55 (58)
T d1uj0a_           3 RRVRALYDFEAVEDNELTFKHGELITVLDDSDANWWQGEN-HRGTGLFPSNFVT   55 (58)
T ss_dssp             EEEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEE
T ss_pred             CEEEECCCCCCCCcCCcCCCCCCEEEEeEEeCCCEEEEEE-CCeEEEEehHhEe
Confidence            5688999999999999999999999999999999999876 5899999999986

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.30  E-value=3.8e-07  Score=64.50  Aligned_cols=55  Identities=33%  Similarity=0.696  Sum_probs=49.4

Q ss_pred             cEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceeec
Q psy17476        126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK  181 (513)
Q Consensus       126 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~  181 (513)
                      +.+.++|||.+...++|+|++||.+.|++.. +.||..++..|..|++|.+|++..
T Consensus         2 ~~a~alydf~a~~~~ELs~~~Gd~i~v~~~~-~~ww~~~~~~g~~G~~P~nyve~i   56 (59)
T d1i07a_           2 KYAKSKYDFVARNSSELSVMKDDVLEILDDR-RQWWKVRNASGDSGFVPNNILDIM   56 (59)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEECGGG-CCEEEEECTTSCEEEEEGGGEEEE
T ss_pred             eEEEEccCCCCCCCCeeeEcCCCEEEEEEEc-CCcEEEEEcCCCEEEECHHHeEEC
Confidence            4688999999999999999999999999865 579999888899999999999753

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.29  E-value=4.5e-07  Score=63.92  Aligned_cols=54  Identities=30%  Similarity=0.543  Sum_probs=48.9

Q ss_pred             EEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeec-CCCccccccCCceee
Q psy17476        127 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD-KNGSVGYIPSNYVKE  180 (513)
Q Consensus       127 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~g~~pp~~~~~  180 (513)
                      .+.++|+|.+...++|+|++|+.+.|++..++.||..+. ..|..|++|.+|++.
T Consensus         2 ~~~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~~P~~yVe~   56 (58)
T d1jo8a_           2 WATAEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSL   56 (58)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEE
T ss_pred             EEEEccCCCCCCcCCcCCCCCCEEEEEEEcCCCEEEEEECCCCCEEEEchHHEEE
Confidence            478999999999999999999999999999999998875 468899999999863

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=2.3e-07  Score=65.99  Aligned_cols=56  Identities=25%  Similarity=0.515  Sum_probs=50.3

Q ss_pred             CCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecC-CCccccccCCcee
Q psy17476        124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK-NGSVGYIPSNYVK  179 (513)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~g~~g~~pp~~~~  179 (513)
                      .+.++.++|||.+...++|+|++||.+.|++..++.||..... .|..|++|.+|++
T Consensus         2 ~G~~~rAl~df~~~~~~eLs~~~Gd~i~v~~~~~~~W~~~~~~~~g~~G~vP~nyve   58 (60)
T d1arka_           2 AGKIFRAMYDYMAADADEVSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVE   58 (60)
T ss_dssp             CCCCEECCSCCCCSSSSBCCCCTTCEECCSEECSSSEEEEECTTTCCEEEEETTTCE
T ss_pred             CCcEEEECccCCCCCCCCcCCCCCCEEEEEEEcCCCEEEEEECCCCCEEEEcHHHEE
Confidence            3567899999999999999999999999999999999988764 6899999999985

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=7.7e-07  Score=72.69  Aligned_cols=64  Identities=28%  Similarity=0.652  Sum_probs=56.0

Q ss_pred             CCCCCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceeec
Q psy17476        117 RKPDQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK  181 (513)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~  181 (513)
                      ..+.....+..++++|+|.+...++|+|++||++.|++..++.||.++. .|..|++|.+|++..
T Consensus         6 ~~~~~~~~g~~~~alydy~a~~~dELs~~~Gd~i~Vl~~~~~gWw~g~~-~g~~G~~P~~yv~~~   69 (118)
T d1ng2a2           6 EDPEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRK-DDVTGYFPSMYLQKS   69 (118)
T ss_dssp             CCCCCCTTCEEEEESSCBCCCSTTBCCBCTTCEEEEEECCTTSEEEEEE-TTEEEEEEGGGEEET
T ss_pred             ccCCCCCCCcEEEECcCCCCCCCCEecCCCCCEEEEeEecCCCeEEEEE-CCeEEEEehhhEEEC
Confidence            3455555678899999999999999999999999999999999999875 689999999999754

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=4.9e-07  Score=63.71  Aligned_cols=54  Identities=20%  Similarity=0.594  Sum_probs=48.6

Q ss_pred             cEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceee
Q psy17476        126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE  180 (513)
Q Consensus       126 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~  180 (513)
                      ..++++|||.+...++|+|++|+.+.|++..+..||..+. .|..|++|.+|+++
T Consensus         3 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~~Ww~~~~-~g~~G~~P~~yve~   56 (58)
T d1ng2a1           3 QTYRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQM-KAKRGWIPASFLEP   56 (58)
T ss_dssp             EEEECSSCBCCSSTTCCCBCTTCEEEEEECCTTSCCEEEE-CCCCCCCCGGGCCC
T ss_pred             eEEEECccCcCCCCCCcCCCCCCEEEEEEecCCCeEEEEE-CCCCcEEcHhHEEE
Confidence            4578999999999999999999999999999999998874 58899999999864

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=5.2e-07  Score=66.59  Aligned_cols=62  Identities=31%  Similarity=0.432  Sum_probs=51.2

Q ss_pred             CCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceeec
Q psy17476        120 DQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK  181 (513)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~  181 (513)
                      ++......+.++|+|.+...++|+|++|+++.|++...+.||......|..|++|.+|++..
T Consensus         5 s~~~p~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~g~~G~~P~~yve~i   66 (72)
T d1ugva_           5 SSGTPFRKAKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFL   66 (72)
T ss_dssp             SSCCSCCCEEESSCBCCCSSSBCCBCTTCEEBSCCBCSSTTEEEEESSSCEEEEEGGGEEEC
T ss_pred             CCCCCCEEEEEcccCCCCCCCEecCCCCCEEEEeeccCCCCEEEEEeCCCEEEEchHHEEEC
Confidence            34455678999999999999999999999999998877665544456789999999999754

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=7.2e-07  Score=63.88  Aligned_cols=54  Identities=22%  Similarity=0.567  Sum_probs=46.8

Q ss_pred             cEEEEeccCCCCCCCCCCCCCCCEEEEeecCC---ccceeeecCCCccccccCCceee
Q psy17476        126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ---EHWWKVKDKNGSVGYIPSNYVKE  180 (513)
Q Consensus       126 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~g~~g~~pp~~~~~  180 (513)
                      .+++|+|||.+...++|+|++||.+.|++..+   ..||.+++ .|..|++|.+|++.
T Consensus         5 g~v~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~~gW~~g~~-~g~~G~~P~~yv~~   61 (63)
T d1ycsb2           5 GVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARL-NDKEGYVPRNLLGL   61 (63)
T ss_dssp             GEEEESSCBCCSSTTBCCBCSSCEEEECCCCTTSCSSEEEEEE-TTEEEEEEGGGEEC
T ss_pred             CEEEEeeCCCCCCCCCcCCCCCCEEEEEEecCCCCCCEEEEEE-CCeEEEEchHHhEe
Confidence            46889999999999999999999999987653   36999875 68999999999863

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=1.3e-06  Score=65.86  Aligned_cols=62  Identities=19%  Similarity=0.321  Sum_probs=53.3

Q ss_pred             CCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeec----CCCccccccCCceeec
Q psy17476        120 DQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD----KNGSVGYIPSNYVKEK  181 (513)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~g~~g~~pp~~~~~~  181 (513)
                      ++...+.++.++|+|.+...++|+|++||++.|++..++.||....    ..+..|++|.+|++..
T Consensus         2 ss~~~g~~~~al~~y~~~~~~eLs~~~Gd~i~Vl~~~~~~Ww~g~~~~~~~~~~~G~~P~~yv~~~   67 (80)
T d1ue9a_           2 SSGSSGEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLL   67 (80)
T ss_dssp             CCSSCCEEEEECSCCCCCSTTBCCCCTTCEEEEEEECSSSEEEEEECSCCSSCCEEEEETTSEEEC
T ss_pred             CCCCCCCEEEECcCCCCCCCCEeeEcCCCEEEEEEEeCCCeEEEEEccCCCCCCEeEEEheeEEEC
Confidence            3445567899999999999999999999999999999999998753    4567899999998754

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=1.4e-06  Score=68.48  Aligned_cols=55  Identities=38%  Similarity=0.698  Sum_probs=50.3

Q ss_pred             CcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceee
Q psy17476        125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKE  180 (513)
Q Consensus       125 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~  180 (513)
                      ...++++|||.+...++|+|++||++.|++..++.||..+ ..|..|++|.+|++.
T Consensus        34 ~~~~~Alydy~a~~~~ELsf~~Gd~i~Vl~~~~~gWw~g~-~~g~~G~~P~nyVe~   88 (98)
T d1udla_          34 VCQVIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQGE-INGVTGLFPSNYVKM   88 (98)
T ss_dssp             SEEEEESSCCCCSSTTSCCCCTTCEEEECBCCSSSEEBCB-SSSCBCCEETTSEEE
T ss_pred             ccEEEEccCCCCCCCCEeeEcCCCEEEEeEecCCCeEEEE-ECCeEEEEchHHEEE
Confidence            4579999999999999999999999999999999999987 468999999999865

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=7.7e-07  Score=64.91  Aligned_cols=57  Identities=37%  Similarity=0.727  Sum_probs=49.7

Q ss_pred             CCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceeecc
Q psy17476        124 RPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEKE  182 (513)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~~  182 (513)
                      ....++++|+|.+...++|+|++||++.|++. ++.||..+. .|..|++|.+|+++.+
T Consensus         7 ~~~~~vAl~~y~~~~~~eLs~~~Gd~v~vl~~-~~~Ww~~~~-~g~~G~vP~~yv~~~~   63 (69)
T d1uhfa_           7 GGEEYIALYPYSSVEPGDLTFTEGEEILVTQK-DGEWWTGSI-GDRSGIFPSNYVKPKD   63 (69)
T ss_dssp             CSEEEECSSCBCCSSSSBCCBCTTCEEEECEE-ETTEEEECS-TTCCEEECGGGCEECC
T ss_pred             CCcEEEECccCCCCCcCCcCCCCCCEEEEEEe-cCCEEEEEE-CCcEEEEchhhEEECC
Confidence            45789999999999999999999999999976 567998874 5899999999998643

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.20  E-value=1e-06  Score=61.98  Aligned_cols=53  Identities=38%  Similarity=0.769  Sum_probs=44.8

Q ss_pred             cEEEEeccCCCCCCCCCCCCCCCEEEEeecCCc--cceeeecCCCccccccCCcee
Q psy17476        126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE--HWWKVKDKNGSVGYIPSNYVK  179 (513)
Q Consensus       126 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~g~~g~~pp~~~~  179 (513)
                      +.++|+|+|.+...++|+|++||.+.|++..+.  .||.. ...|..|++|.+|++
T Consensus         2 P~~~Alydy~a~~~~ELs~~~Gd~v~vl~~~~~~~~W~~~-~~~g~~G~vP~~yve   56 (58)
T d1oota_           2 PKAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTG-RVNGREGIFPANYVE   56 (58)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEECCSCTTSEEEE-EETTEEEEEEGGGEE
T ss_pred             CeEEEccCCCCCCCCCccCCCCCEEEEEEeecCCCCEEEE-EECCcEEEEcHHHEE
Confidence            368999999999999999999999999987643  45554 457899999999985

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3.9e-07  Score=67.06  Aligned_cols=59  Identities=27%  Similarity=0.447  Sum_probs=51.9

Q ss_pred             CCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceeec
Q psy17476        123 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK  181 (513)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~  181 (513)
                      ...+.+.|+|+|.+...++|+|++|+++.|++..++.||..+...+..|++|.+|+...
T Consensus         4 ~~~~~v~Aly~f~a~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~~~G~fP~~yv~~~   62 (71)
T d2hspa_           4 TFKCAVKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEM   62 (71)
T ss_dssp             CSSSCEECCSCCCCSSSSSCCCCTTCEEBSCCCBTTTEECCBCSSCCSCCEETTTCCSC
T ss_pred             CCcEEEEEcccCCcCCcCCccCCCCCEEEEEEecCCCEEEEEECCeEEEEEchHHeEEc
Confidence            34567899999999999999999999999999999999998876677789999998653

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=1e-06  Score=64.76  Aligned_cols=57  Identities=40%  Similarity=0.842  Sum_probs=50.3

Q ss_pred             CcEEEEeccCCCCCCCCCCCCCCCEEEEeecCC--ccceeeecCCCccccccCCceeec
Q psy17476        125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ--EHWWKVKDKNGSVGYIPSNYVKEK  181 (513)
Q Consensus       125 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~g~~g~~pp~~~~~~  181 (513)
                      ...+.++|||.+...++|+|++||.+.|++..+  +.||..++..|..|++|.+|++..
T Consensus         6 l~~~~Alydf~~~~~~eLs~~~Gd~i~vl~~~~~~~~Ww~~~~~~G~~G~vP~~yv~~~   64 (71)
T d1u5sa1           6 LHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVL   64 (71)
T ss_dssp             SSEEEESSCCCCCSSSBCCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEEC
T ss_pred             cEEEEECccCCCCCCCEeeECCCCEEEEEEcccCCCCeEEEEECCCCEEEEChHHEEEC
Confidence            356899999999999999999999999998543  479999888899999999999764

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.17  E-value=8.5e-07  Score=64.38  Aligned_cols=55  Identities=36%  Similarity=0.790  Sum_probs=47.4

Q ss_pred             CcEEEEeccCCCCCC-CCCCCCCCCEEEEeecCC-----ccceeeecCCCccccccCCcee
Q psy17476        125 PKVVVALYPFKAIEG-GDLSLEKGAEYEVMDDTQ-----EHWWKVKDKNGSVGYIPSNYVK  179 (513)
Q Consensus       125 ~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~g~~pp~~~~  179 (513)
                      ...+.++|+|.+... .+|+|++|+.+.|++..+     ..||..++..|..|++|.+|+.
T Consensus         5 ~~~~~Alydy~~~~~~~ELs~~~Gd~i~vl~~~d~~~~~~~Ww~g~~~~G~~G~~P~nyve   65 (67)
T d2v1ra1           5 LEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIE   65 (67)
T ss_dssp             CEEEEESSCBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEE
T ss_pred             CEEEEECccCCCCCCCCEeCCCCCCEEEEEEeecCCCcCCCeEEEEeCCCCEEEEEHHHEE
Confidence            356899999999875 589999999999998643     5899998888999999999985

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=1.8e-06  Score=67.24  Aligned_cols=60  Identities=25%  Similarity=0.445  Sum_probs=47.9

Q ss_pred             CCCcEEEEeccCCCCC------CCCCCCCCCCEEEEeecCCcc-ceeeecCCCccccccCCceeecc
Q psy17476        123 IRPKVVVALYPFKAIE------GGDLSLEKGAEYEVMDDTQEH-WWKVKDKNGSVGYIPSNYVKEKE  182 (513)
Q Consensus       123 ~~~~~~~~~~~~~~~~------~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~g~~g~~pp~~~~~~~  182 (513)
                      .....|+|+|||.+..      .++|+|++||++.|++..+.. ||......|..|++|.+|++...
T Consensus        15 ~~~~~~~Alydy~~~~~~~~~~e~ELsf~~Gd~i~v~~~~~~~gW~~~~~~~G~~G~~P~nyve~~~   81 (96)
T d1wiea_          15 GKVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQ   81 (96)
T ss_dssp             SCEEEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCTTSEECCC
T ss_pred             CCceEEEEeeeecCcccCCCCCCcEeeEcCCCEEEEEEeeCCCceEEEEeCCCCEEEEehHHeEECC
Confidence            3457899999998753      367999999999999877766 55555567899999999997643

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=1.3e-06  Score=65.06  Aligned_cols=59  Identities=34%  Similarity=0.539  Sum_probs=51.7

Q ss_pred             CCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceeec
Q psy17476        122 MIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK  181 (513)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~  181 (513)
                      ...+.++.++|||.+...++|+|++||++.|++..++.||.... .|..|++|.+|+...
T Consensus         7 g~~~~~~rAlydy~a~~~~eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~i   65 (76)
T d1ujya_           7 GSHQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWEGTL-NGRTGWFPSNYVREI   65 (76)
T ss_dssp             SCCCEEEECCSCBCCSSTTSCCBCSSCCEEESSCCSSSCEEEEE-TTEEEEECTTTSEEC
T ss_pred             CCCCEEEEECccCCCCCCCCccCCCCCEEEEeEEcCCCEEEEEE-CCcEEEEchHHEEEC
Confidence            34455788999999999999999999999999998899999875 589999999998754

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=2.6e-06  Score=63.06  Aligned_cols=60  Identities=27%  Similarity=0.477  Sum_probs=51.1

Q ss_pred             CCCCCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCceeec
Q psy17476        120 DQMIRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYVKEK  181 (513)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~~~~  181 (513)
                      ++......+.++|+|.+...++|+|++||++.|++. ++.||.... .|..|++|.+|++..
T Consensus         5 s~~~~~~~~~alydy~a~~~~ELs~~~Gd~i~vl~~-~~~ww~g~~-~g~~G~fP~~yve~i   64 (74)
T d1j3ta_           5 SSGVENLKAQALCSWTAKKDNHLNFSKHDIITVLEQ-QENWWFGEV-HGGRGWFPKSYVKII   64 (74)
T ss_dssp             CCCCCCCEEEESSCBCCCSTTBCCBCTTCEEEEEEE-CSSEEEEES-TTCCCEEEGGGEEEC
T ss_pred             CCCCCCeEEEEccCCCCCCCCEecCCCCCEEEEEEc-cCCeEEEEE-CCcEEEEchhhEEEC
Confidence            344556789999999999999999999999999987 457887764 689999999999764

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.03  E-value=4.8e-06  Score=73.76  Aligned_cols=72  Identities=11%  Similarity=0.038  Sum_probs=52.5

Q ss_pred             eeEeEecccccceEEEEEEeCceeeEEeecCCC---------C-------------HHHHHHHHHHHhcCCCCceeceee
Q psy17476        432 MLLEELGSGQFGVVRRGKWRGSIDVAMMKEGTM---------S-------------EDDFIEEAKVMTRLQHQNLVQLYG  489 (513)
Q Consensus       432 ~~~~~lG~G~fG~V~~g~~~~~~~v~~~k~~~~---------~-------------~~~f~~E~~il~~l~HpNIV~l~g  489 (513)
                      .+++.||+|+||.||+|+..+...+| +|....         .             ...+.+|+.+|.++.|+|+++.++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vA-vKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECV-VKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEE-EEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEE-EEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            56889999999999999987654444 442110         0             013456889999999999999876


Q ss_pred             EEEeCCeeEEEEccCCCCc
Q psy17476        490 VCSKHRPIYIVTDTSSFRL  508 (513)
Q Consensus       490 ~~~~~~~~~lV~E~~~~Gl  508 (513)
                      +.    .-+|||||++++.
T Consensus        82 ~~----~~~lvme~~~~~~   96 (191)
T d1zara2          82 WE----GNAVLMELIDAKE   96 (191)
T ss_dssp             EE----TTEEEEECCCCEE
T ss_pred             ec----CCEEEEEeecccc
Confidence            52    2379999999854

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=4.1e-06  Score=64.78  Aligned_cols=57  Identities=23%  Similarity=0.387  Sum_probs=49.8

Q ss_pred             CcEEEEeccCCCCCCCCCCCCCCCEEEEeecC----CccceeeecCCCccccccCCceeecc
Q psy17476        125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT----QEHWWKVKDKNGSVGYIPSNYVKEKE  182 (513)
Q Consensus       125 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~g~~g~~pp~~~~~~~  182 (513)
                      ..+++++|+|.+...++|+|++||++.|++..    +..||.++. .|..||+|.+|+++..
T Consensus        17 ~~~~~a~~~f~a~~~~eLs~~~Gd~v~vl~~~d~~~~~~Ww~~~~-~g~~G~~P~~yv~~~~   77 (92)
T d1ug1a_          17 EKLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDN-GVTKGFVYSSFLKPYN   77 (92)
T ss_dssp             GGEEEESSCCCCCSSSCCCCCTTCEEEEEESCCTTSCSSEEEEEC-SSSEEEEEGGGEEECC
T ss_pred             CeEEEEcCCcCCCCCCeEEEecccEEEEEEcccccccCCceEEEe-cccEEEEEhhhceecC
Confidence            46799999999999999999999999999865    357998875 6889999999998653

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=6.2e-06  Score=61.78  Aligned_cols=57  Identities=33%  Similarity=0.746  Sum_probs=49.2

Q ss_pred             CcEEEEeccCCCCCCCCCCCCCCCEEEEeecC----CccceeeecCCCccccccCCceeecc
Q psy17476        125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDT----QEHWWKVKDKNGSVGYIPSNYVKEKE  182 (513)
Q Consensus       125 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~g~~g~~pp~~~~~~~  182 (513)
                      ..+++++|+|.+...++|+|++||.+.|++..    .+.||..+ ..|..|++|.+|+++.+
T Consensus        13 ~~~~~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~~~~W~~g~-~~g~~G~vP~~yv~~~~   73 (79)
T d1uhca_          13 NQVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAE-VNGKKGYVPSNYIRKTE   73 (79)
T ss_dssp             SCCEEESSCBCCCSSSBCCBCTTCEEEEEESCCTTSCTTEEEEE-SSSCEEEEEGGGEEECC
T ss_pred             CEEEEECccCCCCCCCCccCCCCCEEEEEEeecCCCCCCEEEEE-ECCCEEEEehhhEEECC
Confidence            45799999999999999999999999999754    45798886 56899999999998654

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.97  E-value=5.2e-06  Score=61.01  Aligned_cols=61  Identities=20%  Similarity=0.314  Sum_probs=47.9

Q ss_pred             CCCCCcEEEEeccCCCCC-CCCCCCCCCCEEEEeecCC-ccceeeec-CCCccccccCCceeec
Q psy17476        121 QMIRPKVVVALYPFKAIE-GGDLSLEKGAEYEVMDDTQ-EHWWKVKD-KNGSVGYIPSNYVKEK  181 (513)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~-~~~~~~~~-~~g~~g~~pp~~~~~~  181 (513)
                      +......|.++|+|.+.. .++|+|++||++.|+...+ +.||.... ..|..|++|.+|++..
T Consensus         3 s~~~~~~~~Alydy~~~~~~deLsf~~Gd~i~vl~~~~~~gW~~g~~~~~g~~G~fP~nyVe~i   66 (72)
T d1spka_           3 SGSSGQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLL   66 (72)
T ss_dssp             CSSCSCEEECSSCBCCSSCSSBCCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEEC
T ss_pred             CCCCCCEEEEeeccCCCCCCCEeeEcCCCEEEEEEeecCCCeEEEEECCCCCEEEEchhhEEEC
Confidence            344567899999999865 5779999999999987654 45776654 4688999999999754

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

Probab=97.92  E-value=7.5e-06  Score=67.79  Aligned_cols=59  Identities=24%  Similarity=0.428  Sum_probs=51.4

Q ss_pred             CcCCCCCCHHHHHHHHcCCCCCceEEEeecCC-CCceEEEEEeccCCCceeeEEEeecccc
Q psy17476        256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSST-KGLYTLSLYTKVPHPHVKHYHIKQNSRG  315 (513)
Q Consensus       256 ~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~~-~~~~~lsl~~~~~~~~~~~~~i~~~~~g  315 (513)
                      .|++|.++|.+|+++|.. ..+|+||||.|++ .|.|++|+.....+..++||+|++...+
T Consensus        10 ~~~~G~isr~~ae~~L~~-~~~GtFLvR~S~s~~g~~~ls~~~~~~~~~v~h~~i~~~~~~   69 (131)
T d1uura3          10 GIIYGYMGRQEVNDALQN-QDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTA   69 (131)
T ss_dssp             TSSCBSCCHHHHHHTTSS-CCTTCEEEEECSSSTTCEEEEEECSSSSCCEEEEECCGGGSB
T ss_pred             CcEEccCCHHHHHHHHhc-CCCCeEEEEecCCCCCcEEEEEEEecCCCcEEEEEEeecCCC
Confidence            399999999999999975 5789999999975 8999999998877888999999776433

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.90  E-value=5.8e-06  Score=57.55  Aligned_cols=50  Identities=18%  Similarity=0.626  Sum_probs=42.1

Q ss_pred             EeccCCCCCCCCCCCCCCCEEEEeecCCccce-eeec-CCCccccccCCcee
Q psy17476        130 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWW-KVKD-KNGSVGYIPSNYVK  179 (513)
Q Consensus       130 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~-~~g~~g~~pp~~~~  179 (513)
                      ++|||.+...++|+|++||.+.|++..+..|| .... ..|..|++|.+|++
T Consensus         4 alydf~a~~~~ELs~~~Gd~i~v~~~~~~~~w~~~~~~~~g~~G~~P~nyve   55 (56)
T d1zuua1           4 VLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR   55 (56)
T ss_dssp             ECSCBCCCSTTBCCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEE
T ss_pred             EeeeeCCCCCCEeeECCCCEEEEEEEecCCCcEEEeCCCCceEEEEehhhEE
Confidence            78999999999999999999999988776654 4333 56889999999974

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.78  E-value=1.1e-05  Score=62.13  Aligned_cols=54  Identities=22%  Similarity=0.374  Sum_probs=47.5

Q ss_pred             CcEEEEeccCCCCCCCC-------CCCCCCCEEEEeecCCccceeeecC--CCccccccCCce
Q psy17476        125 PKVVVALYPFKAIEGGD-------LSLEKGAEYEVMDDTQEHWWKVKDK--NGSVGYIPSNYV  178 (513)
Q Consensus       125 ~~~~~~~~~~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~~~--~g~~g~~pp~~~  178 (513)
                      ...+.++|||.+...++       |+|++||++.|++..++.||..+..  .|..|++|.++.
T Consensus        21 ~~~vrAlydY~~~~dd~~P~~~~~LsF~~GDii~v~~~~d~~WW~gr~~~~~g~~G~~PS~~~   83 (96)
T d1t0ha_          21 AFAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVK   83 (96)
T ss_dssp             CEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHHH
T ss_pred             cEEEEEeeccCCCCCCCCccccccccCCCCCEEEEeeeeCCCceEEEEcCCCCCEEEecCcHH
Confidence            35688999999998887       9999999999999999999999874  578899998764

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=1.4e-05  Score=61.96  Aligned_cols=57  Identities=30%  Similarity=0.518  Sum_probs=46.4

Q ss_pred             CcEEEEeccCCCCCCCCCCCCCCCEEEEeecCCc-cceeeecCCCccccccCCceeec
Q psy17476        125 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE-HWWKVKDKNGSVGYIPSNYVKEK  181 (513)
Q Consensus       125 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~g~~g~~pp~~~~~~  181 (513)
                      ...+.++|+|.+...++|.|++||++.|++..+. .||......|..|++|.+|++..
T Consensus         5 ~~~~rAlydy~~~~~~ELs~~~Gd~v~Vl~~~~~~~~w~~~~~~g~~G~~P~~Yve~~   62 (93)
T d1uffa_           5 SSGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKM   62 (93)
T ss_dssp             CCCEEESSCBCCCSSSCCCBCTTCEEEECSSCCCSSSEEEEEETTEEEEEETTTEEEC
T ss_pred             CeEEEECccCCCCCCCCccCcCCCEEEEEEeccCCCCEEEEEeCCcEEEEchHHEEEC
Confidence            3468999999999999999999999999976643 33333446799999999999754

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.77  E-value=4.9e-06  Score=65.00  Aligned_cols=53  Identities=28%  Similarity=0.649  Sum_probs=45.7

Q ss_pred             EEEeccCCCCC-----CCCCCCCCCCEEEEeecCCccceeeec-----CCCccccccCCceee
Q psy17476        128 VVALYPFKAIE-----GGDLSLEKGAEYEVMDDTQEHWWKVKD-----KNGSVGYIPSNYVKE  180 (513)
Q Consensus       128 ~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~g~~pp~~~~~  180 (513)
                      +-|+|||.+..     ..+|+|++||++.|++..++.||.++.     ..|..|++|.+|+..
T Consensus         4 vrAlydy~~~~d~~~~~~eLsf~kGdil~V~~~~d~~WW~~~~~~~~~~~g~~G~~Psnyv~e   66 (96)
T d1kjwa1           4 IRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVE   66 (96)
T ss_dssp             EEESSCBCHHHHHCCCSSBCCBCTTCEEEEEECCSSSEEEEEECCSSCCCSCCEEEECHHHHH
T ss_pred             EEEcccCcCCcCCCCCCccceEcCCCEEEEeeeccCceEEEEEccCCCCCCCEeEEeccceee
Confidence            56999999875     458999999999999999999999874     457899999999854

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.65  E-value=4.5e-05  Score=55.15  Aligned_cols=54  Identities=22%  Similarity=0.479  Sum_probs=44.1

Q ss_pred             EEEEeccCCC------CCCCCCCCCCCCEEEEeec-CCccceeeecC-CCccccccCCceee
Q psy17476        127 VVVALYPFKA------IEGGDLSLEKGAEYEVMDD-TQEHWWKVKDK-NGSVGYIPSNYVKE  180 (513)
Q Consensus       127 ~~~~~~~~~~------~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~-~g~~g~~pp~~~~~  180 (513)
                      .+.++++|.+      ...++|+|++||++.|++. .+..||..++. .|..|++|.+|+++
T Consensus         6 k~~a~~~y~~~~~~~~~~~~eLsf~~GD~i~Vl~~~~~~gWw~G~~~~~g~~G~fP~nyVeP   67 (69)
T d1gcqc_           6 KMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHP   67 (69)
T ss_dssp             EEEECSCBSSSSCCGGGCSCBCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEE
T ss_pred             cEEEeeeEeccCCCCCCCCCEeeEcCCCEEEEEEEecCCCEEEEEECCCCCEEEEeHHHEEE
Confidence            4567777765      4568899999999999975 45689998875 68999999999875

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=5.5e-05  Score=59.73  Aligned_cols=57  Identities=25%  Similarity=0.416  Sum_probs=47.6

Q ss_pred             cEEEEeccCCCCCCCCCCCCCCCEEEEeec---CCccceeeec-------CCCccccccCCceeecc
Q psy17476        126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDD---TQEHWWKVKD-------KNGSVGYIPSNYVKEKE  182 (513)
Q Consensus       126 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~-------~~g~~g~~pp~~~~~~~  182 (513)
                      ..+.|+|+|.+...++|+|++|+++.|+..   .+..||....       ..|..||+|.+|++...
T Consensus        22 ~~~~Alydy~~~~~~eL~f~~Gd~i~Vl~k~~~~~~~WW~g~~~g~~~~~~~g~~G~fP~nyV~~~~   88 (106)
T d1i1ja_          22 SMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQ   88 (106)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEE
T ss_pred             eEEEEccccCCCCCCCccCCCCCEEEEEEecCCCCcceEEEEecCccccccCCcccccccccEEEcc
Confidence            568999999999999999999999999864   4578998742       24568999999998654

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.52  E-value=3.8e-05  Score=57.94  Aligned_cols=58  Identities=21%  Similarity=0.217  Sum_probs=46.7

Q ss_pred             CCCcEEEEeccCCCCCCCCCCCCCCCEEEEeecCC-----ccceeeec---------CCCccccccCCceee
Q psy17476        123 IRPKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ-----EHWWKVKD---------KNGSVGYIPSNYVKE  180 (513)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~---------~~g~~g~~pp~~~~~  180 (513)
                      .....+.++|+|.+...++|+|++||++.|+...+     +.||....         ..|..|++|.+|++.
T Consensus        10 ~~~~~~~Alydy~a~~~~ELs~~~Gd~i~Vl~~~~~~~~~dgWw~G~~~~~~~~~~~~~g~~G~fP~nyVe~   81 (83)
T d1bb9a_          10 GFMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTER   81 (83)
T ss_dssp             TCCEEEEESSCBCCSSTTBCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEE
T ss_pred             CCCEEEEEceeECCCCCCEecCcCCCEEEEEEccCCCcccCCEeEEEecCCccccccCCCCEEEEchhHeEE
Confidence            34457899999999999999999999999997654     45887542         235689999999864

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=2.3e-05  Score=58.93  Aligned_cols=56  Identities=25%  Similarity=0.382  Sum_probs=47.9

Q ss_pred             cEEEEeccCCCCCCCCCCCCCCCEEEEeecC---------------CccceeeecC-CCccccccCCceeec
Q psy17476        126 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDT---------------QEHWWKVKDK-NGSVGYIPSNYVKEK  181 (513)
Q Consensus       126 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---------------~~~~~~~~~~-~g~~g~~pp~~~~~~  181 (513)
                      ..+.++|+|.+...++|+|++||++.|+...               ++.||..++. .|..|++|.+|++..
T Consensus         4 ~~~raly~y~~~~~~eLs~~~Gd~i~V~~~~~~~~~~~~~~~~~~~~~GW~~G~~~~~g~~G~FP~nYVe~i   75 (83)
T d1phta_           4 YQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYI   75 (83)
T ss_dssp             EEEEECSCBCCSSTTBCCBCTTCEEEEEHHHHHTTTCCTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEE
T ss_pred             CEEEEcCccCCCCCCcccccCCCEEEEEeccccccccccccccccCCCCeEEEEECCCCcEeeEehhhEEEc
Confidence            4688999999999999999999999998642               3469998764 689999999999754

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.20  E-value=0.00012  Score=61.39  Aligned_cols=52  Identities=17%  Similarity=0.351  Sum_probs=46.2

Q ss_pred             EEEEeccCCCCCCCC-------CCCCCCCEEEEeecCCccceeeecC--CCccccccCCce
Q psy17476        127 VVVALYPFKAIEGGD-------LSLEKGAEYEVMDDTQEHWWKVKDK--NGSVGYIPSNYV  178 (513)
Q Consensus       127 ~~~~~~~~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~~~--~g~~g~~pp~~~  178 (513)
                      .|-++|||.+...++       |+|++||++.|++..+.+||.+++.  .|..|++|.++.
T Consensus        25 ~vra~~dy~~~~d~~~p~~~~~LsF~kGDii~V~~~~d~~WW~gr~~~~~g~~G~iPS~~~   85 (145)
T d1vyva1          25 AVKTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPLR   85 (145)
T ss_dssp             EEEESSCBCTTSCCSCSSTTCBCCBCTTCEEEEEEEEETTEEEEEESSTTCCCEEEECHHH
T ss_pred             EEEEeeeeCCccCCcCCcccccccCcCCCEEEEeeccCCCcEEEEEcCCCCceeEeCCchh
Confidence            478999999998887       9999999999999999999999863  588999998654

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=97.13  E-value=0.00027  Score=48.11  Aligned_cols=40  Identities=40%  Similarity=0.915  Sum_probs=36.6

Q ss_pred             EEeccccccCCCCcccccCCeEEeeecCccceeeeeccCC
Q psy17476         76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG  115 (513)
Q Consensus        76 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  115 (513)
                      +++++|.+....++++.+|+.+.++++.+.|||.++..+|
T Consensus         2 ~Alydy~a~~~~eLs~~~Gd~~~vl~~~~~~Ww~~~~~~g   41 (53)
T d2rn8a1           2 IALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNG   41 (53)
T ss_dssp             EESSCCCCSSTTBCCCCTTCEEEECCCSCSSCEEEECTTS
T ss_pred             EEeeeECCCCCCeeeECCCCEEEEeEEcCCCeEEEEeCCC
Confidence            5789999999999999999999999999999999986654

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.0003  Score=58.30  Aligned_cols=58  Identities=28%  Similarity=0.501  Sum_probs=44.5

Q ss_pred             hhhhhc-cCCcEEEEecCCC-CcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhh
Q psy17476        328 IPEVKD-KEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVN  391 (513)
Q Consensus       328 ~~~~l~-~~g~~LvR~s~~~-~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~  391 (513)
                      ++.+|. ++|.||||.|+++ |.|+||+..   .+.++|++|..  +|.+++. ...|.++.+||.
T Consensus        47 Ae~lL~~~dGsFLVR~S~~~~g~y~LSv~~---~~~v~H~~I~~--~g~~~~~-~~~F~sl~eLV~  106 (141)
T d1xa6a2          47 ADELLGGVEGAYILRESQRQPGCYTLALRF---GNQTLNYRLFH--DGKHFVG-EKRFESIHDLVT  106 (141)
T ss_dssp             HHHHHCSCTTBEEEEECSSSTTCEEEEEEE---TTEEEECCCEE--SSSEECS-SSCCCCSSHHHH
T ss_pred             HHHHHcCCCCeEEEEecCCCCCCEEEEEEE---CCEEEEEEEEE--CCCEEEC-CCeECCHHHHHh
Confidence            445554 5799999999765 789999986   57899999976  3556654 457999999874

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.76  E-value=0.0011  Score=45.55  Aligned_cols=41  Identities=34%  Similarity=0.767  Sum_probs=37.2

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCC
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG  115 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  115 (513)
                      ..++++|.+....++++.+|+.+.++++.++|||.++..+|
T Consensus         4 v~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g   44 (57)
T d1ckaa_           4 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEG   44 (57)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEEEEECSSSSEEEEECTTS
T ss_pred             EEECCCCCcCCcCCcCCCCCCEEEEEEEcCCCeEEEEECCC
Confidence            45789999999999999999999999999999999987655

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.74  E-value=0.0004  Score=57.06  Aligned_cols=52  Identities=15%  Similarity=0.363  Sum_probs=44.8

Q ss_pred             EEEEeccCCCCCCCC-------CCCCCCCEEEEeecCCccceeeecC--CCccccccCCce
Q psy17476        127 VVVALYPFKAIEGGD-------LSLEKGAEYEVMDDTQEHWWKVKDK--NGSVGYIPSNYV  178 (513)
Q Consensus       127 ~~~~~~~~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~~~--~g~~g~~pp~~~  178 (513)
                      .|-++|+|.+...++       |+|++||++.|++..+..||.++..  .|..|++|..+.
T Consensus        25 ~vra~~~Y~~~~d~~~P~~~~~LsF~~gdil~v~~~~d~~WW~~r~~~~~~~~G~iPs~~~   85 (136)
T d1vyua1          25 AVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQR   85 (136)
T ss_dssp             EEEESSCEEGGGCTTCSSTTCBCEECTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHHH
T ss_pred             EEEEeeccCCCCCCCCcccCcccCCCCCCEEEEEeccCCCcEEEEeccCCCceeccCchHH
Confidence            366999999998777       8999999999999999999999863  467899998653

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.70  E-value=0.0011  Score=47.22  Aligned_cols=43  Identities=47%  Similarity=1.015  Sum_probs=38.8

Q ss_pred             ceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCC
Q psy17476         73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG  115 (513)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  115 (513)
                      ++.+++++|.+....++++.+|+.+.++++.+.+||.++..+|
T Consensus         3 ~~v~Alydf~a~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g   45 (67)
T d1gl5a_           3 EIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYG   45 (67)
T ss_dssp             SCEEECSCBCCSSSSBCCBCTTCEEEEEECSSSSEEEEECSSS
T ss_pred             EEEEECCCCCCCCcCCcCCCCCCEEEEEEecCCCcEEEEECCC
Confidence            3567899999999999999999999999999999999987654

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=96.63  E-value=0.0013  Score=44.82  Aligned_cols=39  Identities=28%  Similarity=0.724  Sum_probs=35.9

Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeecCccceeeeec
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      +.+++++|.+....++++.+|+.+.++++.++|||.++.
T Consensus         2 ~~vAl~dy~~~~~~eLs~~~Gd~v~v~~~~~~~Ww~g~~   40 (55)
T d1u06a1           2 LVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEV   40 (55)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred             EEEECCCCCCCCcCCccCCCCCEEEEeEEcCCCEEEEEE
Confidence            356889999999999999999999999999999999985

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.58  E-value=0.00044  Score=57.05  Aligned_cols=41  Identities=27%  Similarity=0.481  Sum_probs=34.5

Q ss_pred             CcCCCCCCHHHHHHHHcCCCCCceEEEeecC-C-CCceEEEEEe
Q psy17476        256 AWYVGDMSRQRAESILKQEDKEGCFVVRNSS-T-KGLYTLSLYT  297 (513)
Q Consensus       256 ~w~~~~~~R~~aeeLL~~~~~~g~fliR~s~-~-~~~~~lsl~~  297 (513)
                      .|++|.++|..|+++|.. ..+|+||||.|+ + .|.++++...
T Consensus         8 gw~~G~isr~~a~~~L~~-~~~GtFLvR~S~~s~~G~~tis~~~   50 (141)
T d1bg1a3           8 GYIMGFISKERERAILST-KPPGTFLLRFSESSKEGGVTFTWVE   50 (141)
T ss_dssp             SCCCBCCCTTGGGTTTTT-SCTTCBCEEECSSCSSCCEEECCCC
T ss_pred             CeEEEeCCHHHHHHHhhC-CCCCeEEEEecCCccCCCEEEEEEe
Confidence            499999999999999975 579999999996 3 6788888544

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.0022  Score=43.35  Aligned_cols=38  Identities=32%  Similarity=0.729  Sum_probs=35.0

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecCccceeeeec
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      .+++++|.+....++++.+|..|.++++.++|||.++.
T Consensus         3 yval~~y~a~~~~eLs~~~Gd~v~vl~~~~~gWw~g~~   40 (53)
T d1wlpb1           3 YVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRK   40 (53)
T ss_dssp             EEECSCBCCCSSSBCCBCTTCEEEEEECCTTSSEEEES
T ss_pred             EEEeeeECCCCCCEecCCCCCEEEEEeecCCceEEEEE
Confidence            36789999999999999999999999999999999984

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.25  E-value=0.0016  Score=46.36  Aligned_cols=43  Identities=44%  Similarity=0.947  Sum_probs=38.3

Q ss_pred             ceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCC
Q psy17476         73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG  115 (513)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  115 (513)
                      +..+++++|.+....++++.+|+.+.++++.+.+||.++.++|
T Consensus         9 ~~v~Alydy~a~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g   51 (67)
T d1awwa_           9 KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNG   51 (67)
T ss_dssp             CEEEBSSCCCCSSSSSCCCCSSCEEECCCCCSSSEECCBCTTS
T ss_pred             EEEEECcCCCCCCcCCcCCCCCCEEEEEEEcCCCeEEEEECCC
Confidence            3457889999999999999999999999999999999987655

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.0031  Score=46.60  Aligned_cols=41  Identities=17%  Similarity=0.367  Sum_probs=37.1

Q ss_pred             ceEEEeccccccCCCCcccccCCeEEeeecCccceeeeecc
Q psy17476         73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK  113 (513)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  113 (513)
                      ....++++|.+....+|++.+|+.|.|+++.++|||.+...
T Consensus         8 ~~~~al~~y~~~~~~eLs~~~Gd~i~Vl~~~~~~Ww~g~~~   48 (80)
T d1ue9a_           8 EIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQ   48 (80)
T ss_dssp             EEEEECSCCCCCSTTBCCCCTTCEEEEEEECSSSEEEEEEC
T ss_pred             CEEEECcCCCCCCCCEeeEcCCCEEEEEEEeCCCeEEEEEc
Confidence            45678999999999999999999999999999999998753

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=96.13  E-value=0.004  Score=42.84  Aligned_cols=40  Identities=28%  Similarity=0.688  Sum_probs=36.4

Q ss_pred             ceEEEeccccccCCCCcccccCCeEEeeecCccceeeeec
Q psy17476         73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      +...++++|.+....++++.+|+.+.+++..+.|||.++.
T Consensus         3 ~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~W~~g~~   42 (58)
T d1sema_           3 KFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQL   42 (58)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEECSSSSEEEEEE
T ss_pred             EEEEECCCCCcCCcCCcCCCCCCEEEEeEEcCCCEEEEEE
Confidence            3456889999999999999999999999999999999985

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.98  E-value=0.0055  Score=41.92  Aligned_cols=40  Identities=33%  Similarity=0.856  Sum_probs=36.1

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecCccceeeeeccC
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKN  114 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  114 (513)
                      .+++++|.+....++++.+|+.+.++++.+++||.+....
T Consensus         3 ~vAl~dy~a~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~   42 (57)
T d1efna_           3 FVALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLT   42 (57)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEEEEECSSCSEEEEEETT
T ss_pred             EEECCCCCCCCcCCcCCCCCCEEEEEEecCCCCEEEEECC
Confidence            4688999999999999999999999999999999888643

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.96  E-value=0.0046  Score=42.36  Aligned_cols=38  Identities=34%  Similarity=0.715  Sum_probs=35.1

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecCccceeeeec
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      ..++++|.+....++++.+|+.+.+++..++|||.++.
T Consensus         4 arAlydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~   41 (57)
T d1utia_           4 ARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRL   41 (57)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred             EEECcCCCCCCcCCcCCCCCCEEEEeEEcCCCEEEEEE
Confidence            45789999999999999999999999999999999975

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.83  E-value=0.0071  Score=41.51  Aligned_cols=40  Identities=18%  Similarity=0.420  Sum_probs=35.8

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecCccceeeeeccC
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKN  114 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  114 (513)
                      ..++++|.+....++++.+|+.+.++++.++|||.++...
T Consensus         3 ~~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~   42 (58)
T d1jo8a_           3 ATAEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELEK   42 (58)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEETT
T ss_pred             EEEccCCCCCCcCCcCCCCCCEEEEEEEcCCCEEEEEECC
Confidence            3578999999999999999999999999999999988643

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.77  E-value=0.0047  Score=43.11  Aligned_cols=39  Identities=26%  Similarity=0.498  Sum_probs=35.7

Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeecCccceeeeec
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      ...++++|.+....++++.+|+.|.+++..++|||.++.
T Consensus         7 ~v~Aly~y~a~~~~eLsf~~Gd~i~vl~~~~~~Ww~g~~   45 (62)
T d1k4us_           7 QVEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLEGES   45 (62)
T ss_dssp             EEECCSCBCCCSSSBCCBCSSCEEEEEEESSSSCEEEEC
T ss_pred             EEEECCCCCCCCcCCcCCCCCCEEEEeEEcCCCEEEEEE
Confidence            356789999999999999999999999999999999875

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.75  E-value=0.0064  Score=41.43  Aligned_cols=37  Identities=35%  Similarity=0.741  Sum_probs=34.3

Q ss_pred             EEeccccccCCCCcccccCCeEEeeecCccceeeeec
Q psy17476         76 VALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        76 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      .++++|.+....++++.+|+.+.+++..++|||.++.
T Consensus         5 ~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~g~~   41 (56)
T d1gcqa_           5 QALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGAC   41 (56)
T ss_dssp             EESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred             EECcCCCcCCcCCcCCCCCCEEEEEEecCCCEEEEEE
Confidence            4789999999999999999999999999999999876

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.74  E-value=0.0048  Score=44.77  Aligned_cols=42  Identities=12%  Similarity=0.252  Sum_probs=37.4

Q ss_pred             ceEEEeccccccCCCCcccccCCeEEeeecCccceeeeeccC
Q psy17476         73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKN  114 (513)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  114 (513)
                      ....++++|.+....++++.+|+.|.+++..++|||.++...
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~~Ww~v~~~~   49 (74)
T d1wfwa_           8 STMTVIKDYYALKENEICVSQGEVVQVLAVNQQNMCLVYQPA   49 (74)
T ss_dssp             CEEECCSCBCCCSSSCCCBCTTCEEEEEEECTTSEEEEEECS
T ss_pred             CEEEEeEEECCCCCCCccCccCCEEEEEEEcCCCCEEEEeCc
Confidence            345688999999999999999999999999999999998644

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.65  E-value=0.0073  Score=41.46  Aligned_cols=38  Identities=37%  Similarity=0.850  Sum_probs=35.0

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecCccceeeeec
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      ..++++|.+....++++.+|+.+++.+..++|||.++.
T Consensus         5 ~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~W~~g~~   42 (58)
T d1uj0a_           5 VRALYDFEAVEDNELTFKHGELITVLDDSDANWWQGEN   42 (58)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred             EEECCCCCCCCcCCcCCCCCCEEEEeEEeCCCEEEEEE
Confidence            45789999999999999999999999999999999885

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.57  E-value=0.0079  Score=47.89  Aligned_cols=41  Identities=29%  Similarity=0.658  Sum_probs=37.6

Q ss_pred             CceEEEeccccccCCCCcccccCCeEEeeecCccceeeeec
Q psy17476         72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      ....+++++|.+....+|++.+|+.|.|+++.++|||.+..
T Consensus        14 g~~~~alydy~a~~~dELs~~~Gd~i~Vl~~~~~gWw~g~~   54 (118)
T d1ng2a2          14 GEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRK   54 (118)
T ss_dssp             CEEEEESSCBCCCSTTBCCBCTTCEEEEEECCTTSEEEEEE
T ss_pred             CcEEEECcCCCCCCCCEecCCCCCEEEEeEecCCCeEEEEE
Confidence            34578999999999999999999999999999999999885

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.57  E-value=0.006  Score=41.90  Aligned_cols=38  Identities=21%  Similarity=0.556  Sum_probs=35.1

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecCccceeeeec
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      ..++++|.+....++++.+|+.+.++++.++|||.++.
T Consensus         5 ~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~~Ww~~~~   42 (58)
T d1ng2a1           5 YRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQM   42 (58)
T ss_dssp             EECSSCBCCSSTTCCCBCTTCEEEEEECCTTSCCEEEE
T ss_pred             EEECccCcCCCCCCcCCCCCCEEEEEEecCCCeEEEEE
Confidence            46789999999999999999999999999999999885

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.54  E-value=0.0041  Score=44.77  Aligned_cols=41  Identities=24%  Similarity=0.477  Sum_probs=36.2

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCC
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG  115 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  115 (513)
                      ..++++|.+....++++.+|+.+.++++.++|||.++.+.+
T Consensus         9 v~Aly~f~a~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~   49 (71)
T d2hspa_           9 VKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGK   49 (71)
T ss_dssp             EECCSCCCCSSSSSCCCCTTCEEBSCCCBTTTEECCBCSSC
T ss_pred             EEEcccCCcCCcCCccCCCCCEEEEEEecCCCEEEEEECCe
Confidence            45789999999999999999999999999999999875433

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.53  E-value=0.0084  Score=41.29  Aligned_cols=40  Identities=35%  Similarity=0.753  Sum_probs=35.0

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecCccceeeeeccCC
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDKNG  115 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  115 (513)
                      ..++|+|.+....++++.+|+.+.++++ .++||.+...+|
T Consensus         4 a~alydf~a~~~~ELs~~~Gd~i~v~~~-~~~ww~~~~~~g   43 (59)
T d1i07a_           4 AKSKYDFVARNSSELSVMKDDVLEILDD-RRQWWKVRNASG   43 (59)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEEECGG-GCCEEEEECTTS
T ss_pred             EEEccCCCCCCCCeeeEcCCCEEEEEEE-cCCcEEEEEcCC
Confidence            5688999999999999999999999986 568999987655

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.48  E-value=0.01  Score=41.54  Aligned_cols=40  Identities=30%  Similarity=0.703  Sum_probs=36.4

Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeecCccceeeeecc
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK  113 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  113 (513)
                      ..+++++|.+....++++.+|+.+.++++.++|||.++..
T Consensus         4 ~~vAlydf~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~   43 (64)
T d1fmka1           4 TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSL   43 (64)
T ss_dssp             EEEESSCBCCCSSSBCCBCTTCEEEESCCCSSSEEEEEET
T ss_pred             EEEECccCCCcCcCCcCCCCCCEEEEEEEcCCCcEEEEEC
Confidence            4578999999999999999999999999999999998764

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.38  E-value=0.0063  Score=46.77  Aligned_cols=39  Identities=31%  Similarity=0.642  Sum_probs=35.9

Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeecCccceeeeec
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      ...++|+|.+....+|++.+|+.|.++++.++|||.++.
T Consensus        36 ~~~Alydy~a~~~~ELsf~~Gd~i~Vl~~~~~gWw~g~~   74 (98)
T d1udla_          36 QVIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQGEI   74 (98)
T ss_dssp             EEEESSCCCCSSTTSCCCCTTCEEEECBCCSSSEEBCBS
T ss_pred             EEEEccCCCCCCCCEeeEcCCCEEEEeEecCCCeEEEEE
Confidence            367889999999999999999999999999999999874

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.012  Score=42.11  Aligned_cols=41  Identities=32%  Similarity=0.584  Sum_probs=35.3

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecC-ccceeeeeccCC
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDT-QEHWWKVKDKNG  115 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~  115 (513)
                      .+++++|.+....++++.+|+.+.++++. +.+||.++.++|
T Consensus         9 ~~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~W~~~~~~~g   50 (71)
T d1k9aa1           9 CIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVG   50 (71)
T ss_dssp             EEESSCBCCSSSSBCCBCTTCEEEEEEECSSTTEEEEECTTC
T ss_pred             EEEccCCCCCCCCCccCCCCCEEEEeEeccCCCEEEEEeCCC
Confidence            56889999999999999999999999876 557898887654

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.13  E-value=0.013  Score=44.36  Aligned_cols=40  Identities=25%  Similarity=0.394  Sum_probs=35.9

Q ss_pred             ceEEEeccccccCCCCcccccCCeEEeeecCc----cceeeeec
Q psy17476         73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ----EHWWKVKD  112 (513)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~  112 (513)
                      ++..++++|.+....++++.+|+.|+++++++    +|||.++.
T Consensus        18 ~~~~a~~~f~a~~~~eLs~~~Gd~v~vl~~~d~~~~~~Ww~~~~   61 (92)
T d1ug1a_          18 KLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDN   61 (92)
T ss_dssp             GEEEESSCCCCCSSSCCCCCTTCEEEEEESCCTTSCSSEEEEEC
T ss_pred             eEEEEcCCcCCCCCCeEEEecccEEEEEEcccccccCCceEEEe
Confidence            55778999999999999999999999999874    79999975

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.09  E-value=0.012  Score=42.82  Aligned_cols=40  Identities=28%  Similarity=0.435  Sum_probs=36.2

Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeecCccceeeeecc
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK  113 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  113 (513)
                      +..++|+|.+....++++.+|+.|.++++.++|||.++..
T Consensus        12 ~~rAlydy~a~~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~   51 (76)
T d1ujya_          12 IVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWEGTLN   51 (76)
T ss_dssp             EEECCSCBCCSSTTSCCBCSSCCEEESSCCSSSCEEEEET
T ss_pred             EEEECccCCCCCCCCccCCCCCEEEEeEEcCCCEEEEEEC
Confidence            4568899999999999999999999999999999999863

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.85  E-value=0.017  Score=41.35  Aligned_cols=42  Identities=40%  Similarity=0.916  Sum_probs=36.0

Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeecCc--cceeeeeccCC
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ--EHWWKVKDKNG  115 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~  115 (513)
                      +..++++|.+....++++.+|+.+.+++..+  .|||.+...+|
T Consensus         8 ~~~Alydf~~~~~~eLs~~~Gd~i~vl~~~~~~~~Ww~~~~~~G   51 (71)
T d1u5sa1           8 VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARG   51 (71)
T ss_dssp             EEEESSCCCCCSSSBCCCCSSCCEEEEECCCTTTCEEEEEETTT
T ss_pred             EEEECccCCCCCCCEeeECCCCEEEEEEcccCCCCeEEEEECCC
Confidence            4668899999999999999999999998765  48999986654

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

Probab=94.80  E-value=0.014  Score=47.29  Aligned_cols=59  Identities=19%  Similarity=0.427  Sum_probs=41.5

Q ss_pred             hhhhhc--cCCcEEEEecCCC-CcEEEEEEeeeCCCccceeEEEEcCCccEEEecCcccCChhhhhhcc
Q psy17476        328 IPEVKD--KEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRGEFFLSEKHCCHSIPEVVNYH  393 (513)
Q Consensus       328 ~~~~l~--~~g~~LvR~s~~~-~~~~lsv~~~~~~~~v~h~~I~~~~~~~~~i~~~~~F~sl~eLi~~~  393 (513)
                      ++++|.  ..|+||||.|+++ |.++|++......+.++|+.|.....       ...+.++++.+..+
T Consensus        21 ae~~L~~~~~GtFLvR~S~s~~g~~~ls~~~~~~~~~v~h~~i~~~~~-------~~~~~sl~d~l~~~   82 (131)
T d1uura3          21 VNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDT-------AAAKKTFPDFLSEH   82 (131)
T ss_dssp             HHHTTSSCCTTCEEEEECSSSTTCEEEEEECSSSSCCEEEEECCGGGS-------BTTTBCHHHHHTTC
T ss_pred             HHHHHhcCCCCeEEEEecCCCCCcEEEEEEEecCCCcEEEEEEeecCC-------CcccccHHHHHHhH
Confidence            445554  5799999999765 88999998776667799999865432       23456666655443

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.76  E-value=0.015  Score=41.10  Aligned_cols=42  Identities=33%  Similarity=0.695  Sum_probs=34.2

Q ss_pred             eEEEeccccccCC-CCcccccCCeEEeeecCc-----cceeeeeccCC
Q psy17476         74 VVVALYPFKAIEG-GDLSLEKGAEYEVMDDTQ-----EHWWKVKDKNG  115 (513)
Q Consensus        74 ~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~  115 (513)
                      ...++++|.+... .++++.+|+.+.++++.+     +|||.+...+|
T Consensus         7 ~~~Alydy~~~~~~~ELs~~~Gd~i~vl~~~d~~~~~~~Ww~g~~~~G   54 (67)
T d2v1ra1           7 FARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNG   54 (67)
T ss_dssp             EEEESSCBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEECTTS
T ss_pred             EEEECccCCCCCCCCEeCCCCCCEEEEEEeecCCCcCCCeEEEEeCCC
Confidence            3568899988664 589999999999998764     69999987655

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.71  E-value=0.03  Score=38.76  Aligned_cols=40  Identities=30%  Similarity=0.797  Sum_probs=33.1

Q ss_pred             CceEEEeccccccCCCCcccccCCeEEeeecCccceeeeec
Q psy17476         72 PKVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      .++.+++++|.+....++++.+|+.+.+++..+ +||.+..
T Consensus         6 ~~~~~al~dy~a~~~~eLs~~~Gd~i~v~~~~~-~ww~~~~   45 (62)
T d2iima1           6 DNLVIALHSYEPSHDGDLGFEKGEQLRILEQSG-EWWKAQS   45 (62)
T ss_dssp             TCEEEESSCBCCCSTTBCCBCTTCEEEEEECCS-SEEEEEE
T ss_pred             CcEEEECCCCCcCCcCCcCCCCCCEEEEeEEcC-CCEEEEe
Confidence            356788999999999999999999999998875 5665544

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.66  E-value=0.023  Score=38.61  Aligned_cols=39  Identities=31%  Similarity=0.560  Sum_probs=33.0

Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeecCccc-eeeeec
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEH-WWKVKD  112 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~  112 (513)
                      +.+++++|.+....++++.+|+.+.+++..+++ ||.++.
T Consensus         2 ~~vAlydy~a~~~~eLs~~~Gd~i~vl~~~~~~~W~~~~~   41 (57)
T d1opka1           2 LFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQT   41 (57)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEECTTSSEEEEEC
T ss_pred             EEEECccCCCCCcCCcCCCCCCEEEEeEecCCCCEEEEEE
Confidence            357889999999999999999999999887765 666664

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.53  E-value=0.015  Score=40.04  Aligned_cols=41  Identities=20%  Similarity=0.388  Sum_probs=36.2

Q ss_pred             ceEEEeccccccCCCCcccccCCeEEeeecCccceeeeecc
Q psy17476         73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKDK  113 (513)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  113 (513)
                      ++..++++|.+....++++.+|+.+.++++.++|||.....
T Consensus         4 ~~~rAl~df~~~~~~eLs~~~Gd~i~v~~~~~~~W~~~~~~   44 (60)
T d1arka_           4 KIFRAMYDYMAADADEVSFKDGDAIINVQAIDEGWMYGTVQ   44 (60)
T ss_dssp             CCEECCSCCCCSSSSBCCCCTTCEECCSEECSSSEEEEECT
T ss_pred             cEEEECccCCCCCCCCcCCCCCCEEEEEEEcCCCEEEEEEC
Confidence            34567899999999999999999999999999999988753

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.37  E-value=0.015  Score=41.33  Aligned_cols=39  Identities=33%  Similarity=0.746  Sum_probs=34.0

Q ss_pred             ceEEEeccccccCCCCcccccCCeEEeeecCccceeeeec
Q psy17476         73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      +..+++++|.+....++++.+|+.+++++. +++||.++.
T Consensus         9 ~~~vAl~~y~~~~~~eLs~~~Gd~v~vl~~-~~~Ww~~~~   47 (69)
T d1uhfa_           9 EEYIALYPYSSVEPGDLTFTEGEEILVTQK-DGEWWTGSI   47 (69)
T ss_dssp             EEEECSSCBCCSSSSBCCBCTTCEEEECEE-ETTEEEECS
T ss_pred             cEEEECccCCCCCcCCcCCCCCCEEEEEEe-cCCEEEEEE
Confidence            445788999999999999999999999965 779999875

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.31  E-value=0.027  Score=39.12  Aligned_cols=40  Identities=18%  Similarity=0.527  Sum_probs=34.2

Q ss_pred             ceEEEeccccccCCCCcccccCCeEEeeecCc---cceeeeec
Q psy17476         73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQ---EHWWKVKD  112 (513)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~  112 (513)
                      .+..++++|.+....++++.+|+.+.+++..+   .|||.++.
T Consensus         5 g~v~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~~gW~~g~~   47 (63)
T d1ycsb2           5 GVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARL   47 (63)
T ss_dssp             GEEEESSCBCCSSTTBCCBCSSCEEEECCCCTTSCSSEEEEEE
T ss_pred             CEEEEeeCCCCCCCCCcCCCCCCEEEEEEecCCCCCCEEEEEE
Confidence            34668999999999999999999999987664   47999875

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.04  E-value=0.038  Score=37.62  Aligned_cols=38  Identities=34%  Similarity=0.763  Sum_probs=32.9

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecCc--cceeeeec
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDTQ--EHWWKVKD  112 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~  112 (513)
                      ..++++|.+....++++.+|+.+.++++.+  .|||.++.
T Consensus         4 ~~Alydy~a~~~~ELs~~~Gd~v~vl~~~~~~~~W~~~~~   43 (58)
T d1oota_           4 AVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRV   43 (58)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEECCSCTTSEEEEEE
T ss_pred             EEEccCCCCCCCCCccCCCCCEEEEEEeecCCCCEEEEEE
Confidence            468899999999999999999999998764  57888875

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=93.54  E-value=0.031  Score=42.27  Aligned_cols=39  Identities=21%  Similarity=0.342  Sum_probs=34.2

Q ss_pred             EEEeccccccCCCC-------cccccCCeEEeeecCccceeeeecc
Q psy17476         75 VVALYPFKAIEGGD-------LSLEKGAEYEVMDDTQEHWWKVKDK  113 (513)
Q Consensus        75 ~~~~~~~~~~~~~~-------~~l~~~~~~~~~~~~~~~~~~~~~~  113 (513)
                      ..++|+|.+....+       +++.+|..+.++++.+++||+.+..
T Consensus        24 vrAlydY~~~~dd~~P~~~~~LsF~~GDii~v~~~~d~~WW~gr~~   69 (96)
T d1t0ha_          24 VRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLV   69 (96)
T ss_dssp             EEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSEEEEEES
T ss_pred             EEEeeccCCCCCCCCccccccccCCCCCEEEEeeeeCCCceEEEEc
Confidence            44789998877776       9999999999999999999999873

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.42  E-value=0.047  Score=39.75  Aligned_cols=40  Identities=25%  Similarity=0.575  Sum_probs=34.8

Q ss_pred             ceEEEeccccccCCCCcccccCCeEEeeecC----ccceeeeec
Q psy17476         73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDT----QEHWWKVKD  112 (513)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~  112 (513)
                      .+..++++|.+....++++.+|+.|.++++.    .+|||.++.
T Consensus        14 ~~~~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~~~~W~~g~~   57 (79)
T d1uhca_          14 QVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEV   57 (79)
T ss_dssp             CCEEESSCBCCCSSSBCCBCTTCEEEEEESCCTTSCTTEEEEES
T ss_pred             EEEEECccCCCCCCCCccCCCCCEEEEEEeecCCCCCCEEEEEE
Confidence            3567899999999999999999999999765    479999974

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.15  E-value=0.083  Score=36.72  Aligned_cols=39  Identities=41%  Similarity=0.873  Sum_probs=32.8

Q ss_pred             ceEEEeccccccCCCCcccccCCeEEeeecCccceeeeec
Q psy17476         73 KVVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      .+.+++++|.+....++++.+|+.+.++++ +++||.+..
T Consensus         5 ~~vvAlydy~~~~~~eLs~~~Gd~i~v~~~-~~~ww~~~~   43 (65)
T d1qcfa1           5 IIVVALYDYEAIHHEDLSFQKGDQMVVLEE-SGEWWKARS   43 (65)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEEC-CTTEEEEEE
T ss_pred             EEEEECCcCCCCCcCccCCCCCCEEEEEEE-CCCCEEEEE
Confidence            346789999999999999999999999985 567877664

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.03  E-value=0.053  Score=38.91  Aligned_cols=38  Identities=26%  Similarity=0.455  Sum_probs=33.2

Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeecCccceeeeec
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      ...++++|.+....+|++.+|+.|+++++ +++||.+..
T Consensus        12 ~~~alydy~a~~~~ELs~~~Gd~i~vl~~-~~~ww~g~~   49 (74)
T d1j3ta_          12 KAQALCSWTAKKDNHLNFSKHDIITVLEQ-QENWWFGEV   49 (74)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEE-CSSEEEEES
T ss_pred             EEEEccCCCCCCCCEecCCCCCEEEEEEc-cCCeEEEEE
Confidence            35688999999999999999999999987 678998775

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.93  E-value=0.054  Score=36.54  Aligned_cols=38  Identities=29%  Similarity=0.667  Sum_probs=28.3

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecC-ccceeeeec
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDT-QEHWWKVKD  112 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~  112 (513)
                      .+++++|.+....++++.+|+.++++++. +++||.+..
T Consensus         3 a~Alydy~a~~~~ELs~~~Gd~v~v~~~~~~~~W~~~~~   41 (56)
T d1gria1           3 AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAEL   41 (56)
T ss_dssp             EEECSCBCCCSSSCCCBCTTCEEEC------CCEEEEES
T ss_pred             EEEeeCCCCCCCCCcCCCCCCEEEEEeccCCCCeEEEEE
Confidence            36789999999999999999999988865 567777653

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.81  E-value=0.062  Score=41.57  Aligned_cols=43  Identities=35%  Similarity=0.558  Sum_probs=32.6

Q ss_pred             hhhhhc--cCCcEEEEecCCC-CcEEEEEEeeeCCCccceeEEEEcCCc
Q psy17476        328 IPEVKD--KEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHIKQNSRG  373 (513)
Q Consensus       328 ~~~~l~--~~g~~LvR~s~~~-~~~~lsv~~~~~~~~v~h~~I~~~~~~  373 (513)
                      ++.+|.  ..|+||||.|+.. +.|+|++..   .+.+.|+.|.....+
T Consensus        12 Ae~lL~~~~~G~FLVR~S~~~~~~~~LS~~~---~~~v~H~~I~~~~~~   57 (109)
T d2eyva1          12 AVALLQGQRHGVFLVRDSSTSPGDYVLSVSE---NSRVSHYIINSSGPR   57 (109)
T ss_dssp             HHHHCSSCSTTCEEEECCCSSSSCEEEEEEE---TTEEEEEEEECCCCS
T ss_pred             HHHHhcCCCCCeEEeeecCCCCCCEEEEEEE---CCEEEEEEEEEcCCc
Confidence            344453  5799999998755 789999986   477999999876554

>d1ri9a_ b.34.2.1 (A:) Fyn-binding protein (T-cell adapter protein adap) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn-binding protein (T-cell adapter protein adap)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.78  E-value=0.036  Score=39.61  Aligned_cols=41  Identities=24%  Similarity=0.499  Sum_probs=37.1

Q ss_pred             CCCCCCCCCCCEEEEeecCCccceeeecCCCccccccCCce
Q psy17476        138 EGGDLSLEKGAEYEVMDDTQEHWWKVKDKNGSVGYIPSNYV  178 (513)
Q Consensus       138 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~pp~~~  178 (513)
                      ...+|.+++||.+.|++.+.+..|.+++..|..||++.+.+
T Consensus        35 g~~dL~vk~GE~ldVIr~t~~~k~LcRN~~GkYGYV~~~~l   75 (77)
T d1ri9a_          35 GTRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYL   75 (77)
T ss_dssp             CTTBCCCCTTCBCEEEEESSSSEEEEEETTTEEEEEEGGGS
T ss_pred             CcccCCcCCCCEEEEEEeCCCCeEEEEcCCCcEEEEEeeee
Confidence            45799999999999999999999999999999999987654

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.72  E-value=0.039  Score=41.83  Aligned_cols=36  Identities=28%  Similarity=0.670  Sum_probs=30.6

Q ss_pred             EeccccccC-----CCCcccccCCeEEeeecCccceeeeec
Q psy17476         77 ALYPFKAIE-----GGDLSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        77 ~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      ++|+|.+..     +.+|++.+|+.+.|+++.+.|||+++.
T Consensus         6 Alydy~~~~d~~~~~~eLsf~kGdil~V~~~~d~~WW~~~~   46 (96)
T d1kjwa1           6 ALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARR   46 (96)
T ss_dssp             ESSCBCHHHHHCCCSSBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred             EcccCcCCcCCCCCCccceEcCCCEEEEeeeccCceEEEEE
Confidence            567887653     358999999999999999999999974

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.78  E-value=0.065  Score=36.07  Aligned_cols=35  Identities=14%  Similarity=0.495  Sum_probs=29.1

Q ss_pred             EeccccccCCCCcccccCCeEEeeecCccc-eeeee
Q psy17476         77 ALYPFKAIEGGDLSLEKGAEYEVMDDTQEH-WWKVK  111 (513)
Q Consensus        77 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~  111 (513)
                      ++++|.+....++++.+|+.+.+++..+.+ ||...
T Consensus         4 alydf~a~~~~ELs~~~Gd~i~v~~~~~~~~w~~~~   39 (56)
T d1zuua1           4 VLYAYVQKDDDEITITPGDKISLVARDTGSGWTKIN   39 (56)
T ss_dssp             ECSCBCCCSTTBCCBCTTCCEEEEECCSSSSEEEEE
T ss_pred             EeeeeCCCCCCEeeECCCCEEEEEEEecCCCcEEEe
Confidence            679999999999999999999999887655 55443

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.46  E-value=0.15  Score=35.91  Aligned_cols=33  Identities=21%  Similarity=0.432  Sum_probs=26.7

Q ss_pred             ccccCCCCcccccCCeEEeeec-Cccceeeeecc
Q psy17476         81 FKAIEGGDLSLEKGAEYEVMDD-TQEHWWKVKDK  113 (513)
Q Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~  113 (513)
                      +.+....+|++.+|..|+++++ .++|||..+..
T Consensus        19 ~~~~~~~eLsf~~GD~i~Vl~~~~~~gWw~G~~~   52 (69)
T d1gcqc_          19 PPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNT   52 (69)
T ss_dssp             CGGGCSCBCCBCTTCEEEEEECCTTCSEEEEEET
T ss_pred             CCCCCCCEeeEcCCCEEEEEEEecCCCEEEEEEC
Confidence            3445668899999999999975 57899999863

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.18  E-value=0.099  Score=42.79  Aligned_cols=37  Identities=11%  Similarity=0.258  Sum_probs=32.4

Q ss_pred             EEeccccccCCCC-------cccccCCeEEeeecCccceeeeec
Q psy17476         76 VALYPFKAIEGGD-------LSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        76 ~~~~~~~~~~~~~-------~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      -++|+|.+..+.+       |++.+|..+.|+++.+.+||++..
T Consensus        27 ra~~dy~~~~d~~~p~~~~~LsF~kGDii~V~~~~d~~WW~gr~   70 (145)
T d1vyva1          27 KTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEKYNNDWWIGRL   70 (145)
T ss_dssp             EESSCBCTTSCCSCSSTTCBCCBCTTCEEEEEEEEETTEEEEEE
T ss_pred             EEeeeeCCccCCcCCcccccccCcCCCEEEEeeccCCCcEEEEE
Confidence            4668888777665       999999999999999999999986

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.41  E-value=0.21  Score=36.40  Aligned_cols=38  Identities=24%  Similarity=0.283  Sum_probs=32.7

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecC-----ccceeeeec
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDT-----QEHWWKVKD  112 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~  112 (513)
                      ..++++|.+....+|++.+|+.+.++.+.     ++|||....
T Consensus        15 ~~Alydy~a~~~~ELs~~~Gd~i~Vl~~~~~~~~~dgWw~G~~   57 (83)
T d1bb9a_          15 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVK   57 (83)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEEEECCSCGGGCCTTEEEEEE
T ss_pred             EEEceeECCCCCCEecCcCCCEEEEEEccCCCcccCCEeEEEe
Confidence            56889999999999999999999998654     578998654

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.31  E-value=0.13  Score=37.67  Aligned_cols=39  Identities=23%  Similarity=0.355  Sum_probs=33.3

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecC---------------ccceeeeecc
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDT---------------QEHWWKVKDK  113 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------------~~~~~~~~~~  113 (513)
                      ..++++|.+....++++.+|+.|.++.+.               ++|||..+..
T Consensus         6 ~raly~y~~~~~~eLs~~~Gd~i~V~~~~~~~~~~~~~~~~~~~~~GW~~G~~~   59 (83)
T d1phta_           6 YRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNE   59 (83)
T ss_dssp             EEECSCBCCSSTTBCCBCTTCEEEEEHHHHHTTTCCTTGGGCHHHHCEEEEEET
T ss_pred             EEEcCccCCCCCCcccccCCCEEEEEeccccccccccccccccCCCCeEEEEEC
Confidence            45789999999999999999999999653               5789998753

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.30  E-value=0.18  Score=38.70  Aligned_cols=40  Identities=20%  Similarity=0.296  Sum_probs=34.5

Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeec---Cccceeeeecc
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDD---TQEHWWKVKDK  113 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~  113 (513)
                      ...++++|.+....+|++.+|..|+|+.+   .+.+||.+...
T Consensus        23 ~~~Alydy~~~~~~eL~f~~Gd~i~Vl~k~~~~~~~WW~g~~~   65 (106)
T d1i1ja_          23 MAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQ   65 (106)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEEEECGGGTTEEEEEEB
T ss_pred             EEEEccccCCCCCCCccCCCCCEEEEEEecCCCCcceEEEEec
Confidence            36689999999999999999999999876   46889988754

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.25  E-value=0.17  Score=37.80  Aligned_cols=38  Identities=29%  Similarity=0.452  Sum_probs=32.1

Q ss_pred             EEEeccccccCCCCcccccCCeEEeeecC--ccceeeeec
Q psy17476         75 VVALYPFKAIEGGDLSLEKGAEYEVMDDT--QEHWWKVKD  112 (513)
Q Consensus        75 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~  112 (513)
                      ..++|+|.+....+|++.+|+.|.|+++.  +.+||....
T Consensus         8 ~rAlydy~~~~~~ELs~~~Gd~v~Vl~~~~~~~~w~~~~~   47 (93)
T d1uffa_           8 YRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSF   47 (93)
T ss_dssp             EEESSCBCCCSSSCCCBCTTCEEEECSSCCCSSSEEEEEE
T ss_pred             EEECccCCCCCCCCccCcCCCEEEEEEeccCCCCEEEEEe
Confidence            46789999999999999999999999776  456787764

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.02  E-value=0.26  Score=34.89  Aligned_cols=38  Identities=18%  Similarity=0.338  Sum_probs=30.0

Q ss_pred             EEEeccccccCC-CCcccccCCeEEeeec-Cccceeeeec
Q psy17476         75 VVALYPFKAIEG-GDLSLEKGAEYEVMDD-TQEHWWKVKD  112 (513)
Q Consensus        75 ~~~~~~~~~~~~-~~~~l~~~~~~~~~~~-~~~~~~~~~~  112 (513)
                      ..++++|.+..+ .+|++.+|+.++++.+ ..+|||....
T Consensus        10 ~~Alydy~~~~~~deLsf~~Gd~i~vl~~~~~~gW~~g~~   49 (72)
T d1spka_          10 VKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEH   49 (72)
T ss_dssp             EECSSCBCCSSCSSBCCBCTTCEEEECCSSCBTTEEEEEE
T ss_pred             EEEeeccCCCCCCCEeeEcCCCEEEEEEeecCCCeEEEEE
Confidence            457899987654 5699999999999865 4567998775

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.26  E-value=0.14  Score=39.34  Aligned_cols=38  Identities=26%  Similarity=0.357  Sum_probs=24.4

Q ss_pred             Chhhhhc---cCCcEEEEecCCC-CcEEEEEEeeeCCCccceeEE
Q psy17476        327 SIPEVKD---KEGCFVVRNSSTK-GLYTLSLYTKVPHPHVKHYHI  367 (513)
Q Consensus       327 ~~~~~l~---~~g~~LvR~s~~~-~~~~lsv~~~~~~~~v~h~~I  367 (513)
                      +++.+|.   .+|+||||.|++. |.|+|++.+.   ..+.|+.+
T Consensus        11 ~Ae~lL~~~~~~G~FLVR~S~~~~g~~~LSv~~~---~~~~~~~~   52 (108)
T d2shpa3          11 EAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTG---DDKGESND   52 (108)
T ss_dssp             HHHHHHHHTCCTTEEEEEECSSSTTCEEEEEEEC---C-----CC
T ss_pred             HHHHHHhhcCCCCeEEEEecCCCCCCeEEEEEec---Cccccccc
Confidence            3455564   4799999999866 7899999873   44445444

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=88.09  E-value=0.6  Score=40.98  Aligned_cols=72  Identities=11%  Similarity=0.041  Sum_probs=47.2

Q ss_pred             Eecccc-cceEEEEEEeCceeeEEeecCCCCHHHHHHHHHHHhcCC--CCceeceeeEEEeCCeeEEEEccCCCC
Q psy17476        436 ELGSGQ-FGVVRRGKWRGSIDVAMMKEGTMSEDDFIEEAKVMTRLQ--HQNLVQLYGVCSKHRPIYIVTDTSSFR  507 (513)
Q Consensus       436 ~lG~G~-fG~V~~g~~~~~~~v~~~k~~~~~~~~f~~E~~il~~l~--HpNIV~l~g~~~~~~~~~lV~E~~~~G  507 (513)
                      .+..|. -+.||+....+...++++-........+..|+..|+.+.  .-.+.++++++.+++..++||||++|-
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~   91 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQ   91 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSE
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccCHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecc
Confidence            344444 367898876554443333322233345778888888763  334567888888888889999999873

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.56  E-value=0.26  Score=34.86  Aligned_cols=39  Identities=28%  Similarity=0.434  Sum_probs=33.1

Q ss_pred             eEEEeccccccCCCCcccccCCeEEeeecCcc-ceeeeec
Q psy17476         74 VVVALYPFKAIEGGDLSLEKGAEYEVMDDTQE-HWWKVKD  112 (513)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~  112 (513)
                      ...++++|.+....+|++.+|+.|+++++.++ +||.+..
T Consensus        12 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~   51 (72)
T d1ugva_          12 KAKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTL   51 (72)
T ss_dssp             CEEESSCBCCCSSSBCCBCTTCEEBSCCBCSSTTEEEEES
T ss_pred             EEEEcccCCCCCCCEecCCCCCEEEEeeccCCCCEEEEEe
Confidence            35788999999999999999999999988765 6887764

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.50  E-value=0.36  Score=36.17  Aligned_cols=43  Identities=21%  Similarity=0.422  Sum_probs=32.8

Q ss_pred             ceEEEeccccccC------CCCcccccCCeEEeeecCc-cceeeeeccCC
Q psy17476         73 KVVVALYPFKAIE------GGDLSLEKGAEYEVMDDTQ-EHWWKVKDKNG  115 (513)
Q Consensus        73 ~~~~~~~~~~~~~------~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~  115 (513)
                      ...+++|+|.+..      ..+|++.+|+.+.++++.+ ++||.....+|
T Consensus        18 ~~~~Alydy~~~~~~~~~~e~ELsf~~Gd~i~v~~~~~~~gW~~~~~~~G   67 (96)
T d1wiea_          18 HLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDG   67 (96)
T ss_dssp             EEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEESSCCSSSCCEEEETTC
T ss_pred             eEEEEeeeecCcccCCCCCCcEeeEcCCCEEEEEEeeCCCceEEEEeCCC
Confidence            4567899997643      3689999999999998765 45787765554

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.84  E-value=0.23  Score=37.91  Aligned_cols=20  Identities=30%  Similarity=0.431  Sum_probs=16.4

Q ss_pred             ChhhhhccCCcEEEEecCCC
Q psy17476        327 SIPEVKDKEGCFVVRNSSTK  346 (513)
Q Consensus       327 ~~~~~l~~~g~~LvR~s~~~  346 (513)
                      +++.+|.++|+||||.|+++
T Consensus        18 ~Ae~lL~~~G~FLVR~S~~~   37 (104)
T d1mila_          18 EAEALLQLNGDFLVRESTTT   37 (104)
T ss_dssp             HHHTTCCSTTEEEEEECCSS
T ss_pred             HHHHHHhcCCcEEEEecCCC
Confidence            45677889999999998755

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.50  E-value=0.29  Score=37.55  Aligned_cols=30  Identities=47%  Similarity=0.718  Sum_probs=23.4

Q ss_pred             Chhhhhc---cCCcEEEEecCCCCcEEEEEEee
Q psy17476        327 SIPEVKD---KEGCFVVRNSSTKGLYTLSLYTK  356 (513)
Q Consensus       327 ~~~~~l~---~~g~~LvR~s~~~~~~~lsv~~~  356 (513)
                      +++++|.   .+|+||||.|++.+.|+|++...
T Consensus        17 eAe~lL~~~~~~G~FLVR~S~~~g~y~LSv~~~   49 (108)
T d1luia_          17 KAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTK   49 (108)
T ss_dssp             HHHHHHHHHCCTTEEEEEECCTTTCEEEEEECS
T ss_pred             HHHHHHHhcCCCCeEEEEecCCCCCEEEEEEec
Confidence            3445553   57999999998889999999863

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.20  E-value=0.38  Score=38.59  Aligned_cols=37  Identities=8%  Similarity=0.265  Sum_probs=31.0

Q ss_pred             EEeccccccCCCC-------cccccCCeEEeeecCccceeeeec
Q psy17476         76 VALYPFKAIEGGD-------LSLEKGAEYEVMDDTQEHWWKVKD  112 (513)
Q Consensus        76 ~~~~~~~~~~~~~-------~~l~~~~~~~~~~~~~~~~~~~~~  112 (513)
                      -.+|+|.+..+.+       |++.+|..+.++++.+.+||+...
T Consensus        27 ra~~~Y~~~~d~~~P~~~~~LsF~~gdil~v~~~~d~~WW~~r~   70 (136)
T d1vyua1          27 RTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSNDWWIGRL   70 (136)
T ss_dssp             EESSCEEGGGCTTCSSTTCBCEECTTCEEEEEEECSSSEEEEEE
T ss_pred             EEeeccCCCCCCCCcccCcccCCCCCCEEEEEeccCCCcEEEEe
Confidence            3567777666555       889999999999999999999986